Split Screen View

Split screen views can be invoked on-the-fly from paired-end alignment tracks.  Right-click the over an alignment  and select View mate region in split screen from the drop-down list.  If the alignment clicked over does not have a mapped mate this option will be grayed out.

 

 

Return to Normal View

To return to the “normal view”, double-click the name panel at the top of one of the panes, or right-click in a name panel and select Switch to standard view.