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PLoS One DOI:10.1371/journal.pone.0067511

Evolutionary dynamics of the accessory genome of Listeria monocytogenes.

Publication TypeJournal Article
Year of Publication2013
AuthorsBakker, HC den, Desjardins, CA, Griggs, AD, Peters, JE, Zeng, Q, Young, SK, Kodira, CD, Yandava, C, Hepburn, TA, Haas, BJ, Birren, BW, Wiedmann, M
JournalPLoS One
Volume8
Issue6
Pagese67511
Date Published2013
ISSN1932-6203
KeywordsConserved Sequence, Evolution, Molecular, Gene Transfer, Horizontal, Genome, Bacterial, Genomics, Listeria monocytogenes, O Antigens, Phosphotransferases, Phylogeny, Prophages
Abstract

Listeria monocytogenes, a foodborne bacterial pathogen, is comprised of four phylogenetic lineages that vary with regard to their serotypes and distribution among sources. In order to characterize lineage-specific genomic diversity within L. monocytogenes, we sequenced the genomes of eight strains from several lineages and serotypes, and characterized the accessory genome, which was hypothesized to contribute to phenotypic differences across lineages. The eight L. monocytogenes genomes sequenced range in size from 2.85-3.14 Mb, encode 2,822-3,187 genes, and include the first publicly available sequenced representatives of serotypes 1/2c, 3a and 4c. Mapping of the distribution of accessory genes revealed two distinct regions of the L. monocytogenes chromosome: an accessory-rich region in the first 65° adjacent to the origin of replication and a more stable region in the remaining 295°. This pattern of genome organization is distinct from that of related bacteria Staphylococcus aureus and Bacillus cereus. The accessory genome of all lineages is enriched for cell surface-related genes and phosphotransferase systems, and transcriptional regulators, highlighting the selective pressures faced by contemporary strains from their hosts, other microbes, and their environment. Phylogenetic analysis of O-antigen genes and gene clusters predicts that serotype 4 was ancestral in L. monocytogenes and serotype 1/2 associated gene clusters were putatively introduced through horizontal gene transfer in the ancestral population of L. monocytogenes lineage I and II.

URLhttp://dx.plos.org/10.1371/journal.pone.0067511
DOI10.1371/journal.pone.0067511
Pubmed

http://www.ncbi.nlm.nih.gov/pubmed/23825666?dopt=Abstract

Alternate JournalPLoS ONE
PubMed ID23825666
PubMed Central IDPMC3692452