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Bioinformatics (Oxford, England) DOI:10.1093/bioinformatics/btt085

Nozzle: a report generation toolkit for data analysis pipelines.

Publication TypeJournal Article
Year of Publication2013
AuthorsGehlenborg, N, Noble, MS, Getz, G, Chin, L, Park, PJ
JournalBioinformatics (Oxford, England)
Date Published2013/03/11

SUMMARY: We have developed Nozzle, an R package that provides an Application Programming Interface to generate HTML reports with dynamic user interface elements. Nozzle was designed to facilitate summarization and rapid browsing of complex results in data analysis pipelines where multiple analyses are performed frequently on big datasets. The package can be applied to any project where user-friendly reports need to be created. AVAILABILITY: The R package is available on CRAN at Examples and additional materials are available at The source code is also available at CONTACT: SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.