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Bioinformatics DOI:10.1093/bioinformatics/bti587

GeneCruiser: a web service for the annotation of microarray data.

Publication TypeJournal Article
Year of Publication2005
AuthorsLiefeld, T, Reich, M, Gould, J, Zhang, P, Tamayo, P, Mesirov, JP
JournalBioinformatics
Volume21
Issue18
Pages3681-2
Date Published2005 Sep 15
ISSN1367-4803
KeywordsAnimals, Computational Biology, Computer Graphics, Database Management Systems, Databases, Genetic, Databases, Protein, Gene Expression Profiling, Genome, Humans, Information Storage and Retrieval, Internet, Mice, Oligonucleotide Array Sequence Analysis, Software, User-Computer Interface
Abstract

SUMMARY: GeneCruiser is a web service allowing users to annotate their genomic data by mapping microarray feature identifiers to gene identifiers from databases, such as UniGene, while providing links to web resources, such as the UCSC Genome Browser. It relies on a regularly updated database that retrieves and indexes the mappings between microarray probes and genomic databases. Genes are identified using the Life Sciences Identifier standard.

AVAILABILITY: GeneCruiser is freely available in the following forms: Web service and Web application, http://www.genecruiser.org; GenePattern, GeneCruiser access has been integrated into our microarray analysis platform, GenePattern. http://www.genepattern.org.

URLhttp://bioinformatics.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=16030072
DOI10.1093/bioinformatics/bti587
Pubmed

http://www.ncbi.nlm.nih.gov/pubmed/16030072?dopt=Abstract

Alternate JournalBioinformatics
PubMed ID16030072