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Diabetes DOI:10.2337/db06-0202

Evaluation of common variants in the six known maturity-onset diabetes of the young (MODY) genes for association with type 2 diabetes.

Publication TypeJournal Article
Year of Publication2007
AuthorsWinckler, W, Weedon, MN, Graham, RR, McCarroll, SA, Purcell, S, Almgren, P, Tuomi, T, Gaudet, D, Boström, KBengtsson, Walker, M, Hitman, G, Hattersley, AT, McCarthy, MI, Ardlie, KG, Hirschhorn, JN, Daly, MJ, Frayling, TM, Groop, L, Altshuler, D
JournalDiabetes
Volume56
Issue3
Pages685-93
Date Published2007 Mar
ISSN0012-1797
KeywordsBasic Helix-Loop-Helix Transcription Factors, Diabetes Mellitus, Type 2, Female, Genetic Predisposition to Disease, Genetic Variation, Genotype, Glucokinase, Hepatocyte Nuclear Factor 1-alpha, Hepatocyte Nuclear Factor 1-beta, Hepatocyte Nuclear Factor 4, Homeodomain Proteins, Humans, Linkage Disequilibrium, Male, Polymorphism, Single Nucleotide, Trans-Activators
Abstract

An important question in human genetics is the extent to which genes causing monogenic forms of disease harbor common variants that may contribute to the more typical form of that disease. We aimed to comprehensively evaluate the extent to which common variation in the six known maturity-onset diabetes of the young (MODY) genes, which cause a monogenic form of type 2 diabetes, is associated with type 2 diabetes. Specifically, we determined patterns of common sequence variation in the genes encoding Gck, Ipf1, Tcf2, and NeuroD1 (MODY2 and MODY4-MODY6, respectively), selected a comprehensive set of 107 tag single nucleotide polymorphisms (SNPs) that captured common variation, and genotyped each in 4,206 patients and control subjects from Sweden, Finland, and Canada (including family-based studies and unrelated case-control subjects). All SNPs with a nominal P value 15,000 samples. We combined these results with our previous studies on HNF4alpha and TCF1 and explicitly tested for gene-gene interactions among these variants and with several known type 2 diabetes susceptibility loci, and we found no genetic interactions between these six genes. We conclude that although rare variants in these six genes explain most cases of MODY, common variants in these same genes contribute very modestly, if at all, to the common form of type 2 diabetes.

URLhttp://diabetes.diabetesjournals.org/cgi/pmidlookup?view=long&pmid=17327436
DOI10.2337/db06-0202
Pubmed

http://www.ncbi.nlm.nih.gov/pubmed/17327436?dopt=Abstract

Alternate JournalDiabetes
PubMed ID17327436
Grant ListG0500070 / / Medical Research Council / United Kingdom
/ / Wellcome Trust / United Kingdom