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Bioinformatics (Oxford, England) DOI:10.1093/bioinformatics/btr260

Molecular signatures database (MSigDB) 3.0.

Publication TypeJournal Article
Year of Publication2011
AuthorsLiberzon, A, Subramanian, A, Pinchback, R, Thorvaldsdóttir, H, Tamayo, P, Mesirov, JP
JournalBioinformatics (Oxford, England)
Volume27
Issue12
Pages1739-40
Date Published2011/06/15
ISSN1367-4803
Abstract

MOTIVATION: Well-annotated gene sets representing the universe of the biological processes are critical for meaningful and insightful interpretation of large-scale genomic data. The Molecular Signatures Database (MSigDB) is one of the most widely used repositories of such sets. RESULTS: We report the availability of a new version of the database, MSigDB 3.0, with over 6700 gene sets, a complete revision of the collection of canonical pathways and experimental signatures from publications, enhanced annotations and upgrades to the web site. AVAILABILITY AND IMPLEMENTATION: MSigDB is freely available for non-commercial use at http://www.broadinstitute.org/msigdb.

URLhttp://bioinformatics.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=21546393
DOI10.1093/bioinformatics/btr260
Pubmed

http://www.ncbi.nlm.nih.gov/pubmed/21546393?dopt=Abstract