GeNets: a unified web platform for network-based genomic analyses.
Nat Methods
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Abstract | Functional genomics networks are widely used to identify unexpected pathway relationships in large genomic datasets. However, it is challenging to compare the signal-to-noise ratios of different networks and to identify the optimal network with which to interpret a particular genetic dataset. We present GeNets, a platform in which users can train a machine-learning model (Quack) to carry out these comparisons and execute, store, and share analyses of genetic and RNA-sequencing datasets. |
Year of Publication | 2018
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Journal | Nat Methods
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Volume | 15
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Issue | 7
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Pages | 543-546
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Date Published | 2018 07
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ISSN | 1548-7105
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DOI | 10.1038/s41592-018-0039-6
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PubMed ID | 29915188
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PubMed Central ID | PMC6450090
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Grant list | U24 CA160034 / CA / NCI NIH HHS / United States
R01 GM074024 / GM / NIGMS NIH HHS / United States
R01 HL096738 / HL / NHLBI NIH HHS / United States
HHSN268201000033C / HL / NHLBI NIH HHS / United States
U01 DK078616 / DK / NIDDK NIH HHS / United States
P01 HD068250 / HD / NICHD NIH HHS / United States
R01 MH109903 / MH / NIMH NIH HHS / United States
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