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Phytopathology DOI:10.1094/PHYTO-08-20-0330-LE

Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic that Includes the Species Complex.

Publication TypeJournal Article
Year of Publication2021
AuthorsGeiser, DM, Al-Hatmi, AMS, Aoki, T, Arie, T, Balmas, V, Barnes, I, Bergstrom, GC, Bhattacharyya, MK, Blomquist, CL, Bowden, RL, Brankovics, B, Brown, DW, Burgess, LW, Bushley, K, Busman, M, Cano-Lira, JF, Carrillo, JD, Chang, H-X, Chen, C-Y, Chen, W, Chilvers, M, Chulze, S, Coleman, JJ, Cuomo, CA, Z de Beer, W, G de Hoog, S, Del Castillo-Múnera, J, Del Ponte, EM, Dieguez-Uribeondo, J, Di Pietro, A, Edel-Hermann, V, Elmer, WH, Epstein, L, Eskalen, A, Esposto, MCarmela, Everts, KL, Fernández-Pavía, SP, da Silva, GFerreira, Foroud, NA, Fourie, G, Frandsen, RJN, Freeman, S, Freitag, M, Frenkel, O, Fuller, KK, Gagkaeva, T, Gardiner, DM, Glenn, AE, Gold, SE, Gordon, TR, Gregory, NF, Gryzenhout, M, Guarro, J, Gugino, BK, Gutierrez, S, Hammond-Kosack, KE, Harris, LJ, Homa, M, Hong, C-F, Hornok, L, Huang, J-W, Ilkit, M, Jacobs, A, Jacobs, K, Jiang, C, Jímenez-Gasco, MDel Mar, Kang, S, Kasson, MT, Kazan, K, Kennell, JC, Kim, H-S, H Kistler, C, Kuldau, GA, Kulik, T, Kurzai, O, Laraba, I, Laurence, MH, Lee, T, Lee, Y-W, Lee, Y-H, Leslie, JF, C Y Liew, E, Lofton, LW, Logrieco, AF, López-Berges, MS, Luque, AG, Lysøe, E, Ma, L-J, Marra, RE, Martin, FN, May, SR, McCormick, SP, McGee, C, Meis, JF, Migheli, Q, Nor, NMIMohame, Monod, M, Moretti, A, Mostert, D, Mulé, G, Munaut, F, Munkvold, GP, Nicholson, P, Nucci, M, O'donnell, K, Pasquali, M, Pfenning, LH, Prigitano, A, Proctor, RH, Ranque, S, Rehner, SA, Rep, M, Rodríguez-Alvarado, G, Rose, LJoy, Roth, MG, Ruiz-Roldán, C, Saleh, AA, Salleh, B, Sang, H, Scandiani, MMercedes, Scauflaire, J, Schmale, DG, Short, DPG, Šišić, A, Smith, JA, Smyth, CW, Son, H, Spahr, E, Stajich, JE, Steenkamp, E, Steinberg, C, Subramaniam, R, Suga, H, Summerell, BA, Susca, A, Swett, CL, Toomajian, C, Torres-Cruz, TJ, Tortorano, AM, Urban, M, Vaillancourt, LJ, Vallad, GE, van der Lee, TAJ, Vanderpool, D, van Diepeningen, AD, Vaughan, MM, Venter, E, Vermeulen, M, Verweij, PE, Viljoen, A, Waalwijk, C, Wallace, EC, Walther, G, Wang, J, Ward, TJ, Wickes, BL, Wiederhold, NP, Wingfield, MJ, Wood, AKM, Xu, J-R, Yang, X-B, Yli-Mattila, T, Yun, S-H, Zakaria, L, Zhang, H, Zhang, N, Zhang, SX, Zhang, X
JournalPhytopathology
Volume111
Issue7
Pages1064-1079
Date Published2021 07
ISSN0031-949X
KeywordsFusarium, Phylogeny, Plant Diseases, Plants
Abstract

Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user's needs and established successful practice. In 2013, the community voiced near unanimous support for a concept of that represented a clade comprising all agriculturally and clinically important species, including the species complex (FSSC). Subsequently, this concept was challenged in 2015 by one research group who proposed dividing the genus into seven genera, including the FSSC described as members of the genus , with subsequent justification in 2018 based on claims that the 2013 concept of is polyphyletic. Here, we test this claim and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of including the FSSC. We reassert the practical and scientific argument in support of a genus that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students, and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species described as genus were recombined in genus , and nine others were renamed Here the global community voices strong support for the inclusion of the FSSC in , as it remains the best scientific, nomenclatural, and practical taxonomic option available.

DOI10.1094/PHYTO-08-20-0330-LE
Pubmed

https://www.ncbi.nlm.nih.gov/pubmed/33200960?dopt=Abstract

Alternate JournalPhytopathology
PubMed ID33200960