Bacterial Genomics Group

Global phylogenomic analyses of Mycobacterium abscessus provide context for non cystic fibrosis infections and the evolution of antibiotic resistance.

1.Google Scholar DOI PubMed

Bronson RA, Gupta C, Manson AL, et al. Global phylogenomic analyses of Mycobacterium abscessus provide context for non cystic fibrosis infections and the evolution of antibiotic resistance. Nat Commun. 2021;12(1):5145. doi:10.1038/s41467-021-25484-9.

Genetic determinants facilitating the evolution of resistance to carbapenem antibiotics.

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Ma P, He LL, Pironti A, et al. Genetic determinants facilitating the evolution of resistance to carbapenem antibiotics. Elife. 2021;10. doi:10.7554/eLife.67310.

Clinically relevant mutations in core metabolic genes confer antibiotic resistance.

1.PubMed Google Scholar DOI

Lopatkin AJ, Bening SC, Manson AL, et al. Clinically relevant mutations in core metabolic genes confer antibiotic resistance. Science. 2021;371(6531). doi:10.1126/science.aba0862.

Limited effects of long-term daily cranberry consumption on the gut microbiome in a placebo-controlled study of women with recurrent urinary tract infections.

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Straub TJ, Chou W-C, Manson AL, et al. Limited effects of long-term daily cranberry consumption on the gut microbiome in a placebo-controlled study of women with recurrent urinary tract infections. BMC Microbiol. 2021;21(1):53. doi:10.1186/s12866-021-02106-4.

Acquisition and Long-term Carriage of Multidrug-Resistant Organisms in US International Travelers.

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Worby CJ, Earl AM, Turbett SE, et al. Acquisition and Long-term Carriage of Multidrug-Resistant Organisms in US International Travelers. Open Forum Infect Dis. 2020;7(12):ofaa543. doi:10.1093/ofid/ofaa543.

Genes Contributing to the Unique Biology and Intrinsic Antibiotic Resistance of Enterococcus faecalis.

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Gilmore MS, Salamzade R, Selleck E, et al. Genes Contributing to the Unique Biology and Intrinsic Antibiotic Resistance of Enterococcus faecalis. mBio. 2020;11(6). doi:10.1128/mBio.02962-20.

Evidence for Expanding the Role of Streptomycin in the Management of Drug-Resistant Mycobacterium tuberculosis.

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Cohen KA, Stott KE, Munsamy V, Manson AL, Earl AM, Pym AS. Evidence for Expanding the Role of Streptomycin in the Management of Drug-Resistant Mycobacterium tuberculosis. Antimicrob Agents Chemother. 2020;64(9). doi:10.1128/AAC.00860-20.

Spatially distinct physiology of Bacteroides fragilis within the proximal colon of gnotobiotic mice.

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Donaldson GP, Chou W-C, Manson AL, et al. Spatially distinct physiology of Bacteroides fragilis within the proximal colon of gnotobiotic mice. Nat Microbiol. 2020;5(5):746-756. doi:10.1038/s41564-020-0683-3.

Adaptive evolution of virulence and persistence in carbapenem-resistant Klebsiella pneumoniae.

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Ernst CM, Braxton JR, Rodriguez-Osorio CA, et al. Adaptive evolution of virulence and persistence in carbapenem-resistant Klebsiella pneumoniae. Nat Med. 2020. doi:10.1038/s41591-020-0825-4.

Acquisition of Antibiotic-Resistant Bacteria by U.S. International Travelers.

1.PubMed Google Scholar DOI

Mellon G, Turbett SE, Worby C, et al. Acquisition of Antibiotic-Resistant Bacteria by U.S. International Travelers. N Engl J Med. 2020;382(14):1372-1374. doi:10.1056/NEJMc1912464.