GCID

Chromosome-Level Genome Assembly of a Human Fungal Pathogen Reveals Synteny among Geographically Distinct Species.

1.DOI Google Scholar PubMed

Voorhies M, Cohen S, Shea TP, et al. Chromosome-Level Genome Assembly of a Human Fungal Pathogen Reveals Synteny among Geographically Distinct Species. mBio. 2022:e0257421. doi:10.1128/mbio.02574-21.

Gene Expression of Diverse Cryptococcus Isolates during Infection of the Human Central Nervous System.

1.DOI Google Scholar PubMed

Yu C-H, Sephton-Clark P, Tenor JL, et al. Gene Expression of Diverse Cryptococcus Isolates during Infection of the Human Central Nervous System. mBio. 2021;12(6):e0231321. doi:10.1128/mBio.02313-21.

Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris.

1.DOI Google Scholar PubMed

Muñoz JF, Welsh RM, Shea T, et al. Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris. Genetics. 2021;218(1). doi:10.1093/genetics/iyab029.

Best practices on the differential expression analysis of multi-species RNA-seq.

1.DOI Google Scholar PubMed

Chung M, Bruno VM, Rasko DA, et al. Best practices on the differential expression analysis of multi-species RNA-seq. Genome Biol. 2021;22(1):121. doi:10.1186/s13059-021-02337-8.

Amoeba Predation of Cryptococcus neoformans Results in Pleiotropic Changes to Traits Associated with Virulence.

1.DOI Google Scholar PubMed

Fu MS, Liporagi-Lopes LC, Santos SRD, et al. Amoeba Predation of Cryptococcus neoformans Results in Pleiotropic Changes to Traits Associated with Virulence. mBio. 2021;12(2). doi:10.1128/mBio.00567-21.

Genome-Wide Analysis of Experimentally Evolved Candida auris Reveals Multiple Novel Mechanisms of Multidrug Resistance.

1.DOI Google Scholar PubMed

Carolus H, Pierson S, Muñoz JF, et al. Genome-Wide Analysis of Experimentally Evolved Candida auris Reveals Multiple Novel Mechanisms of Multidrug Resistance. mBio. 2021;12(2). doi:10.1128/mBio.03333-20.

Genomic epidemiology of a Cryptococcus neoformans case cluster in Glasgow, Scotland, 2018.

1.DOI Google Scholar PubMed

Farrer RA, Borman AM, Inkster T, Fisher MC, Johnson EM, Cuomo CA. Genomic epidemiology of a Cryptococcus neoformans case cluster in Glasgow, Scotland, 2018. Microb Genom. 2021;7(3). doi:10.1099/mgen.0.000537.

Comparative genomics of white and opaque cell states supports an epigenetic mechanism of phenotypic switching in Candida albicans.

1.DOI Google Scholar PubMed

Beekman CN, Cuomo CA, Bennett RJ, Ene IV. Comparative genomics of white and opaque cell states supports an epigenetic mechanism of phenotypic switching in Candida albicans. G3 (Bethesda). 2021;11(2). doi:10.1093/g3journal/jkab001.

An oxindole efflux inhibitor potentiates azoles and impairs virulence in the fungal pathogen Candida auris.

1.DOI Google Scholar PubMed

Iyer KR, Camara K, Daniel-Ivad M, et al. An oxindole efflux inhibitor potentiates azoles and impairs virulence in the fungal pathogen Candida auris. Nat Commun. 2020;11(1):6429. doi:10.1038/s41467-020-20183-3.

Mutations in TAC1B: a Novel Genetic Determinant of Clinical Fluconazole Resistance in Candida auris.

1.DOI Google Scholar PubMed

Rybak JM, Muñoz JF, Barker KS, et al. Mutations in TAC1B: a Novel Genetic Determinant of Clinical Fluconazole Resistance in Candida auris. mBio. 2020;11(3). doi:10.1128/mBio.00365-20.