Spatial Technology Platform

Wang H, Huang R, Nelson J, et al. Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues. Nature communications. 2025;16(1):10215. doi:10.1038/s41467-025-64990-yGoogle ScholarPubMedDOI

Maurer K, Park CY, Mani S, et al. Coordinated Immune Cell Networks in the Bone Marrow Microenvironment Define the Graft versus Leukemia Response with Adoptive Cellular Therapy. bioRxiv : the preprint server for biology. 2024. doi:10.1101/2024.02.09.579677Google ScholarPubMedDOI

Pietiläinen O, Trehan A, Meyer D, et al. Astrocytic cell adhesion genes linked to schizophrenia correlate with synaptic programs in neurons. Cell reports. 2023;42(1):111988. doi:10.1016/j.celrep.2022.111988Google ScholarPubMedDOI

Bryan JP, Binan L, McCann C, Eldar YC, Farhi SL, Cleary B. Optimization-based decoding of Imaging Spatial Transcriptomics data. Bioinformatics (Oxford, England). 2023;39(6). doi:10.1093/bioinformatics/btad362Google ScholarPubMedDOI

Berryer MH, Tegtmeyer M, Binan L, et al. Robust induction of functional astrocytes using NGN2 expression in human pluripotent stem cells. iScience. 2023;26(7):106995. doi:10.1016/j.isci.2023.106995Google ScholarPubMedDOI

Wang H, Huang R, Nelson J, et al. Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.12.07.570603Google ScholarPubMedDOI

Binan L, Danquah S, Valakh V, et al. Simultaneous CRISPR screening and spatial transcriptomics reveals intracellular, intercellular, and functional transcriptional circuits. bioRxiv : the preprint server for biology. 2023. doi:10.1101/2023.11.30.569494Google ScholarPubMedDOI

Stogsdill JA, Kim K, Binan L, Farhi SL, Levin JZ, Arlotta P. Pyramidal neuron subtype diversity governs microglia states in the neocortex. Nature. 2022. doi:10.1038/s41586-022-05056-7Google ScholarPubMedDOI

Hwang WL, Jagadeesh KA, Guo JA, et al. Single-nucleus and spatial transcriptome profiling of pancreatic cancer identifies multicellular dynamics associated with neoadjuvant treatment. Nat Genet. 2022. doi:10.1038/s41588-022-01134-8Google ScholarPubMedDOI

Nehme R, Pietilainen O, Artomov M, et al. The 22q11.2 region regulates presynaptic gene-products linked to schizophrenia. Nat Commun. 2022;13(1):3690. doi:10.1038/s41467-022-31436-8Google ScholarPubMedDOI