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Created 2014-11-05 18:45:56 | Updated | Tags: appistry webinar versions

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Our partners at Appistry are doing another free live webinar tomorrow (Nov 7), this time focusing on the differences between versions of GATK. The ultimate point is, of course, to convince any stragglers to upgrade to the latest and greatest major version series (GATK 3.x for those of you following at home) but unlike us, they will actually take the time to explain in detail why this is a winning proposition.

If you have any questions about the differences between versions, be sure to register today and tune in tomorrow, Thursday 7 November at 12 pm EDT. Anyone can join (not just Appistry customers) so don't miss this great learning opportunity. Every question will be answered, either during the live event or by email afterward if they run out of time.

Created 2014-08-15 09:41:46 | Updated | Tags: appistry rnaseq webinar

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Our partners at Appistry will be doing a webinar on RNAseq analysis next Thursday. The webinar will include a live presentation of the complete pipeline for RNAseq analysis, as well as question time open to all participants. As usual it's free and open to all, you just need to register at Appistry's website. Check it out!

Created 2014-04-10 17:39:08 | Updated | Tags: video presentations appistry webinar slides gatk3

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The slides from today's webinar are available as of now in the GSA team Dropbox at this link, and will be on the documentation website shortly.

Created 2014-04-04 01:48:46 | Updated | Tags: appistry rnaseq webinar gvcf gatk3

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Our partners at Appistry are putting on another webinar next week, and this one's going to be pretty special in our view -- because we're going to be doing pretty much all the talking!

Titled "Speed, Cohorts, and RNAseq: An Insider Look into GATK 3" (see that link for the full program), this webinar will be all about the GATK 3 features, of course. And lest you think this is just another marketing pitch (no offense, marketing people), rest assured that we will be diving into the gory technical details of what happens under the hood. This is a great opportunity to get the inside scoop on how the new features (RNAseq, GVCF pipeline etc) work -- all the stuff that's fit to print, but that we haven't had time to write down in the docs yet. So don't miss it if that's the sort of thing that floats your boat! Or if you miss it, be sure to check out the recording afterward.

As usual the webinar is completely free and open to everyone (not just Appistry customers or prospective for-profit users). All you need to do is register now and tune in on Thursday 4/10.

Talk to you then!

Created 2013-12-02 22:37:28 | Updated 2013-12-02 22:38:04 | Tags: appistry webinar

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Our commercial partner, Appistry, is announcing a webinar about the tools from the Broad Institute that Appistry distributes. They will review improvements to the GATK in 2013, provide an update on all of the components of Appistry's Cancer Genome Analysis Suite, and introduce ContEst, the newest extension to the CGA Suite. You'll also get a preview of Appistry's plans for delivering new Broad NGS analysis tools in 2014.

You can register for this free webinar, which is open to all (not just current license holders) on Appistry's website.

Created 2013-10-28 18:14:01 | Updated | Tags: appistry commercial webinar

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Our commercial partner, Appistry, is announcing a webinar on the commercialization of GATK. They will discuss the Broad-Appistry relationship, the current status of the commercial GATK product (including licensing options), and plans for the future (including expansion to other Broad tools, with a focus on cancer research).

You can register for this free webinar, which is open to all (not just current license holders) on Appistry's website.

Created 2013-10-01 00:55:10 | Updated 2013-10-01 14:24:41 | Tags: mutect appistry webinar cancer

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Our partner Appistry (who distribute GATK and MuTect to commercial users) will be holding a webinar on 3 October. Registration is open to all; you can find more details on the Appistry website here:


Created 2013-07-24 20:26:27 | Updated 2013-07-26 14:41:56 | Tags: mutect appistry gatk webinar

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Heads up, cancer researchers! Appistry (our commercial licensing partner for GATK and now MuTect) is announcing an upcoming webinar on best practices for somatic mutation studies using GATK and MuTect. Registration for the webinar is open to all (not just Appistry customers) so be sure to sign up for this. See the announcement on Appistry's website for more detailed information.

Created 2013-08-19 08:54:23 | Updated | Tags: best-practices webinar callvariants

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I am not sure where I should ask this question, but the GATK forum seemed the most appropriate place. I am currently viewing the webinars from the BroadE Workshop 2013 July 9-10 and the "Call Variants" streaming doesn't seem to work:


Would you have a work around to view this file? or is the file inaccessible for some reason?