Posted in GenomeSTRiP Documentation on 2012-09-12 18:34:23 | Last updated on 2012-09-21 23:20:23

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1. Introduction

The ComputeInsertStatistics utility prints statistics about the data in a binary histogram file.

The printed metrics include the median insert size and robust standard deviation (RSD). The RSD is the width of the central 68% of the insert size distribution.

2. Inputs / Arguments

  • -I <histogram-file> : The input binary histogram file.

3. Outputs

  • -O <output-file> : Tab-delimited output file (default is stdout).

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