Wittkowski transmission disequilibrium test

Category Variant Annotations

VCF Field INFO (variant-level)

Type RodRequiringAnnotation


Test statistic from Wittkowski transmission disequilibrium test. The calculation is based on the following derivation in

Note that this annotation requires a valid ped file.


This annotation can only be used with VariantAnnotator (not with UnifiedGenotyper or HaplotypeCaller).

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GATK version 3.2-2-gec30cee built at 2014/09/12 22:29:29. GTD: NA