SNP Map Table: 129/Sv v.s. C57BL/6J

Unassigned SNPs are included in the FTP tables

Chromosome
GenDist(avg)
FragmentSourceGenDist
SnpPosGt:129/SvGt:C57BL/6J
Chr1
8.7 F
12.MMHAP31FLD3.seqrandom8.7 P to 8.7 F
79TC
25.1 P
24.MMHAP29FRH9.seqrandom25.1 P
130CT
25.5124 F
46.MMHAP82FLH4.seqrandom25.1 F to 25.9248 F
70CT
32.8 F
28.MMHAP86FRB10.seqrandom32.8 F
119GT
33.9 F
18.MMHAP46FRF9.seqrandom33.9 F
34CA
34.2306 F
29.MMHAP15FLB5.seqrandom34.2306 F
23CT
37.2 F
L23637est37.2 F
54CT
49.75 F
31.MMHAP17FRC10.seqrandom49.2 P to 50.3 F
148GA
165GC
MHAa21c3.seqrandom49.2 P to 50.3 F
72CA
51.4 F
Results_ER_9_1_95_3_5.seqrandom51.4 F
112AG
64.5 F
02.MMHAP35FRA8.seqrandom64.5 F
38TA
103CT
66.7 F
10.MMHAP84FLD1.seqrandom66.7 F
86TC
67.8 F
D1Mit421.1genetic marker67.8 F
129GC
69.1245 F
MHAa67e10.seqrandom70.449 F to 67.8 F
130TG
173AG
69.9 F
28.MHAa65T_M13Rev.seqrandom69.9 F
131GA
73.2 P
07.MMHAP61FRC7.seqrandom73.2 P
117GT
20.MHAa96b8.seqrandom73.2 P
96CT
D1Mit31.1genetic marker73.2 P
26TC
74.3 F
D19405est73.2 F to 75.4 F
38GA
74.3 P
16.MMHAP84FRF7.seqrandom74.3 P
102GA
75.4 F
43.MMHAP26FRG10.seqrandom75.4 F
106GA
82.0 F
D1Mit424.1genetic marker82.0 F
24AG
91.75515 F
12.MMHAP37FRD9.seqrandom91.7103 P to 91.8 F
21GA
93GA
121AG
91.8 F
24.MMHAP87FRH9.seqrandom91.8 F
70GA
31.MMHAP57FLC4.seqrandom91.8 F
61AG
X04648est91.8 F
75AC
90GA
91.8 P
D1Mit455.1genetic marker91.8 P
23AG
32CT
120GA
194CT
94.0 F
X92969est94.0 F
36TC
50AG
91CT
94.0 P
D1Mit540.1genetic marker94.0 P
54AG
Chr2
27.3 F
32.MMHAP4FLC5.seqrandom27.3 P to 27.3 F
98CA
31.7 F
41.MMHAP45FRF11.seqrandom31.7 F
137TC
32.8 P
31.MMHAP64FRC10.seqrandom32.8 P
43CT
50.3 F
D43796est50.3 F
28TC
52.45 P
34.MMHAP46FRD10.seqrandom40.4 P to 64.5 P
40GA
52.5 F
46.MMHAP59FLH4.seqrandom52.5 F
124AT
54.6 F
M87276est54.6 F to 54.6 P
27GA
55.7 F
38.MMHAP33FRE11.seqrandom55.7 F
54CT
59.0 F
11.MMHAP87FRD8.seqrandom59.0 F
40GA
60.1 F
D2Mit399.1genetic marker60.1 F
39CT
66.7 F
13.MMHAP61FRE7.seqrandom66.7 F
46AC
27.MMHAP59FLA6.seqrandom66.7 F
65GA
138GA
D2Mit404.1genetic marker66.7 F
24GA
70.58879 F
M55669est74.47758 P to 66.7 F
53AG
73.2 F
17.MMHAP71FRF8.seqrandom73.2 F
30CT
77CT
79AG
112GA
78.7 F
36.MHAa91g12.seqrandom78.7 F
90CT
Chr3
15.3 F
Results_ER_8_28_95_2_4.seqrandom15.3 F
30CT
47AG
25.1 F
35.MMHAP59FLD5.seqrandom25.1 F
58GA
36.1 F
D3Mit157.2genetic marker36.1 F
82CT
40.4 F
11.MMHAP11FLD2.seqrandom40.4 F
62GA
44.8 F
24.MMHAP9FLH3.seqrandom44.8 F
132TC
47.0 F
D3Mit195.2genetic marker47.0 F
35GA
76AG
54.6 F
X61434est54.6 F
129CT
Chr4
3.3 F
X61397est3.3 F
124GA
23.0 P
09.MMHAP37FRC9.seqrandom23.0 P
96TC
30.6 P
17.MMHAP91FLF2.seqrandom30.6 P
20GA
126TA
31.15 F
34.MHAa65T_M13Rev.seqrandom30.6 F to 31.7 F
149CA
39.3 F
MHAa78e1.seqrandom39.3 F to 39.3 P
149CT
47.55 F
01.MMHAP71FRA7.seqrandom47.0 F to 48.1 F
111CT
50.3 F
D17899est50.3 F
70TA
52.5 F
37.MMHAP88FRE10.seqrandom52.5 F
138CT
54.6 F
18.MMHAP82FLF3.seqrandom54.6 F
70TA
32.MMHAP11FLC5.seqrandom54.6 F
94AG
38.MMHAP34FLE5.seqrandom54.6 F
22AC
54TA
59.0 P
37.MMHAP33FRE10.seqrandom59.0 P
68CA
59.55 F
X61399est59.0 P to 60.1 F
110CT
60.1 F
D4Mit203.2genetic marker60.1 F
38AG
62.3 F
D4Mit339.2genetic marker62.3 F
87CT
124AG
140CT
71.0 P
27.MMHAP7FRA12.seqrandom71.0 P
64GA
X78339est71.0 P
111AG
Chr5
3.85 F
29.MMHAP35FLB5.seqrandom3.3 F to 4.4 F
155GA
4.4 F
D5Mit179.1genetic marker4.4 F
46CA
14.2 F
MHAa54a9.seqrandom14.2 F
88AG
16.95 F
MHAa87h2.seqrandom16.4 F to 17.5 F
123CA
18.6 F
03.MMHAP95FRA9.seqrandom18.6 F
21CT
18.6 P
MHAa84d6.seqrandom18.6 P
95TG
128AG
37.75 F
L23801est37.2 P to 38.3 F
138GA
48.65 F
08.MMHAP59FRC8.seqrandom48.1 F to 49.2 F
57GA
59.3702 F
16.MMHAP36FRF7.seqrandom57.9 F to 60.8404 F
20GA
112CT
74.3 F
22.MMHAP91FLH1.seqrandom74.3 F
28GA
77.6 P
11.MMHAP20FRD8.seqrandom77.6 P
28GA
81.37419 F
U28724est76.5 F to 86.24838 P
35AG
Chr6
3.3 F
06.MMHAP84FRB9.seqrandom3.3 F to 3.3 P
64GA
M60493est3.3 F
63AG
110GA
MHAa74g5.seqrandom3.3 F
79TG
MHAa82a9.seqrandom3.3 F
121CT
6.6 F
MHAa75g2.seqrandom6.6 F
42TC
114GA
133AC
7.7 F
32.MHAa55g8.seqrandom7.7 F
133TA
12.0 P
L08757est12.0 P
162AG
U20371est12.0 P
136GT
16.4 F
46.MMHAP28FRH10.seqrandom16.4 F
102CT
40.4 F
20.MMHAP85FLG2.seqrandom40.4 P to 40.4 F
137GA
MHAa54c9.seqrandom40.4 F to 40.4 P
128GA
40.4 P
X99043est40.4 P
24CT
42.6 F
44.MMHAP85FLG5.seqrandom41.5 F to 43.7 F
54GC
63AG
43.7 P
30.MMHAP25FRB12.seqrandom43.7 P
38AT
138AG
44.MMHAP27FRG11.seqrandom43.7 P
121AG
49.2 F
16.MMHAP67FLF1.seqrandom49.2 F
49CT
85AC
51.4 P
D6Mit13genetic marker51.4 P
118GA
D6Mit337.3genetic marker51.4 P
81CT
62.85 F
37.MMHAP17FRE10.seqrandom62.3 F to 63.4 F
89GA
45.MMHAP94FRG12.seqrandom62.3 F to 63.4 F
21AG
60TC
83TG
65.05 F
MHAa52a5.seqrandom63.4 P to 66.7 F
36TC
110TC
65.6 P
D6Mit201.2genetic marker65.6 P
67AG
66.7 F
12.MMHAP34FLD3.seqrandom66.7 F
35GA
Chr7
5.5 F
M21856est5.5 F
103TA
12.0 F
26.MMHAP57FLA5.seqrandom12.0 F
106TC
33.MMHAP5FLC6.seqrandom12.0 F
77AG
MHAa20d2.seqrandom12.0 F
95AC
13.1 F
15.MMHAP34FLE3.seqrandom13.1 F
21TA
76GA
132AG
18.6 F
D7Mit27.2genetic marker18.6 F
73AT
D7Mit28genetic marker18.6 F
58TA
80AG
100CT
D7Mit29genetic marker18.6 F
150TC
X94616est18.6 F
51TC
18.6 P
D19306est18.6 P
143CT
21.3 F
U28217est18.6 F to 24.0 P
141GA
21.35 F
20.MMHAP7FLG2.seqrandom20.8 F to 21.9 F
54TA
22.45 F
MHAa34e4.seqrandom21.9 F to 23.0 F
35GT
25.1 F
23.MMHAP64FLH2.seqrandom25.1 F
62CT
125CT
25.1 P
D7Mit195.2genetic marker25.1 P
67GA
26.2 F
04.MMHAP71FRB7.seqrandom26.2 F
111AG
117GA
139AG
14.MMHAP22FRE8.seqrandom26.2 F
38TC
33.MMHAP27FRC12.seqrandom26.2 F
77GT
MHAa54e9.seqrandom26.2 F
37TC
30.6 F
R74768est30.6 F
34TC
33.9 F
13.MHAa56f1.seqrandom33.9 F
66CT
20.MMHAP4FRG8.seqrandom33.9 F
40GA
101AG
126CT
35.0 P
MHAa54h10.seqrandom35.0 P
89AG
40.95 F
41.MMHAP64FLF5.seqrandom39.3 F to 42.6 F
22GA
45TC
41.5 F
17.MMHAP44FLF2.seqrandom41.5 F
26CT
61AC
31.MMHAP26FRC10.seqrandom41.5 F
40TG
76AG
36.MMHAP70FLD6.seqrandom41.5 F
46CG
67GA
42.6 F
46.MMHAP57FLH4.seqrandom42.6 F
71CT
133GT
D18377est42.6 F
69GC
130TC
49.2 P
21.MMHAP6FLG3.seqrandom49.2 P
74CT
49.75 P
07.MMHAP85FRC7.seqrandom49.2 P to 50.3 P
73AG
142TC
Chr8
0.55 P
28.MMHAP45FLB4.seqrandom0.0 P to 1.1 P
107AG
111GT
MHAa28g7.seqrandom0.0 P to 1.1 P
72GA
2.75 P
MHAa54e7.seqrandom1.1 P to 4.4 P
172GA
4.4 F
11.MMHAP87FLD2.seqrandom4.4 F
26GA
44.MMHAP30FLG5.seqrandom4.4 F
75GA
82AC
101CT
46.MHAa63h10.seqrandom4.4 F
63AG
109AG
17.1619 F
14.MMHAP27FRE8.seqrandom18.6 F to 15.7238 F
21CG
46AG
99GA
122CG
23.0 F
38.MMHAP16FLE5.seqrandom23.0 F
139TC
31.7 F
01.MMHAP58FLA1.seqrandom31.7 F
43AC
35.0 F
34.MMHAP86FLD4.seqrandom35.0 F
75CT
D8Mit145.1genetic marker35.0 F
45AG
X76654est35.0 F
37GA
35 F
24.MMHAP34FLH3.seqrandom35.0 F to 35.0 P
79CG
36.1 F
M23529est36.1 F
127CG
38.8 P
13.MMHAP80FLE1.seqrandom38.3 P to 39.3 P
26AC
39.3 F
15.MMHAP82FLE3.seqrandom39.3 F
117TC
Z49987est39.3 F
38CT
41.5 F
23.MMHAP27FRH8.seqrandom41.5 F to 41.5 P
106TC
128AG
42.6 F
20.MMHAP88FRG8.seqrandom42.6 P to 42.6 F
56CG
122CA
154CA
Chr9
12.0 F
26.MMHAP84FRA11.seqrandom12.0 F
59CG
132AG
13.1 F
28.MMHAP56FRB10.seqrandom13.1 F
76GA
147AG
17.5 F
D9Mit286.1genetic marker17.5 F
44GA
60GA
20.8 F
Y00635est20.8 F to 20.8 P
135GA
22.45 F
45.MMHAP28FLG6.seqrandom21.9 F to 23.0 P
128TC
33.9 P
D9Mit233.1genetic marker33.9 P
28AG
39.3 F
X99273est39.3 F to 39.3 P
29CT
43.7 F
D9Mit211.1genetic marker43.7 F
38TG
X60367est43.7 F
111AT
124TC
53.6 F
R74805est53.6 F
27CT
56.8 P
32.MMHAP63FLC5.seqrandom56.8 P
97TC
60.1 F
D17914est60.1 F
31GA
61.2 F
D9Mit278.2genetic marker61.2 F
26GA
Chr10
0.55 F
43.MMHAP61FRG10.seqrandom0.0 F to 1.1 P
126GT
2.2 F
21.MMHAP91FLG3.seqrandom2.2 F
114AG
47.MMHAP7FRH11.seqrandom2.2 F
155CT
8.7 F
41.MMHAP61FRF11.seqrandom8.7 F
30CT
13.65 F
M70641est12.0 F to 15.3 F
115CT
47.0 P
28.MMHAP15FLB4.seqrandom47.0 P
128TC
MHAa67d12.seqrandom47.0 P
67TC
63.4 P
14.MMHAP61FLE2.seqrandom63.4 P
28TC
Chr11
4.4 F
02.MMHAP90FLA2.seqrandom4.4 F
31GT
58TC
9.8 F
32.MMHAP26FRC11.seqrandom9.8 F
143CT
19.7 F
32.MMHAP9FLC5.seqrandom19.7 F
53GA
120AG
136AG
25.1 P
D11Mit310.1genetic marker25.1 P
44CA
26.75 F
15.MMHAP89FLE3.seqrandom26.2 P to 27.3 F
120GA
27.3 F
24.MMHAP48FLH3.seqrandom27.3 F
47GC
101GA
29.5 F
21.MMHAP66FLG3.seqrandom29.5 F
68TC
U21226est29.5 F
66AT
117GA
39.3 F
22.MMHAP12FRH7.seqrandom39.3 F
109TC
MHAa67c11.seqrandom39.3 F
26TA
44.8 F
D11Mit38.2genetic marker44.8 F
80TC
45.34105 P
D11Mit369genetic marker45.34105 P
23CT
99TG
50.3 F
18.MMHAP86FRF9.seqrandom50.3 P to 50.3 F
48TC
53.6 P
03.MMHAP28FRA9.seqrandom53.6 P
112CT
61.2 F
MHAa81g3.seqrandom62.3 F to 60.1 P
86CG
79.8 P
D11Mit103.1genetic marker79.8 P
30CT
Chr12
2.75 F
MHAa34f9.seqrandom2.2 F to 3.3 F
36TC
3.3 P
47.MMHAP44FLH5.seqrandom3.3 P
36TG
59TC
5.5 F
16.MMHAP46FRF7.seqrandom5.5 F to 5.5 P
30TA
93CT
99CT
139GA
18.MMHAP42FLF3.seqrandom5.5 F to 5.5 P
108CA
9.8 F
46.MMHAP28FLH4.seqrandom9.8 F to 9.8 P
128TC
X60703est9.8 F
37GT
72CT
103GA
10.35 F
14.MMHAP86FLE2.seqrandom9.8 F to 10.9 F
107AT
16.4 F
13.MMHAP22FRE7.seqrandom16.4 F
52AG
130GA
17.5 F
34.MHAa56g10.seqrandom17.5 F
29GA
47TC
18.6 F
10.MMHAP34FLD1.seqrandom18.6 F
99TC
36.MMHAP70FRD12.seqrandom18.6 F
120TC
41.5 F
12.MMHAP91FLD3.seqrandom41.5 F
140TG
60.1 P
D12Mit41.1genetic marker60.1 P
88GT
Chr13
2.2 F
22.MHAa10f10.seqrandom2.2 F
19TC
36AG
26.MMHAP70FLA5.seqrandom2.2 F
104GA
MHAa87h6.seqrandom2.2 P to 2.2 F
59TA
15.3 F
20.MMHAP22FRG8.seqrandom15.3 P to 15.3 F
39CA
91GT
24.0 F
30.MMHAP28FLB6.seqrandom24.0 F
38TG
34.MMHAP35FRD10.seqrandom24.0 F
70GA
MHAa34f2.seqrandom24.0 F
25TC
25.1 F
31.MMHAP76FRC10.seqrandom25.1 F
154AG
31.7 P
D13Mit104.2genetic marker31.7 P
63AG
37.2 F
M62766est37.2 F
25AG
38.3 F
D37797est38.3 P to 38.3 F
76GA
99AG
130AG
136TC
39.3 P
45.MMHAP5FRG12.seqrandom39.3 P
51AT
Chr14
0.0 P
30.MMHAP88FRB12.seqrandom0.0 P
29TC
2.2 F
MHAa7c2.seqrandom2.2 F
90AG
19.7 F
46.MHAa90d10.seqrandom19.7 F to 19.7 P
34AG
25.1 P
U22516est25.1 P
21GT
27.3 P
37.MMHAP64FLE4.seqrandom27.3 P
62AG
109TA
38.3 F
19.MHAa43d7.seqrandom38.3 F
48CA
84TG
51.95 F
41.MMHAP31FLF5.seqrandom51.4 F to 52.5 F
69GA
126AT
134TC
52.5 F
06.MMHAP59FLB3.seqrandom52.5 F
128AG
69.9 F
MHAa67g1.seqrandom69.9 F
101GA
120TC
Chr15
5.5 F
42.MMHAP59FLF6.seqrandom5.5 F
36AG
6.6 F
02.MMHAP86FRA8.seqrandom6.6 F
59AG
146CT
13.65 F
02.MMHAP94FLA2.seqrandom13.1 F to 14.2 F
131CT
14.2 F
X97817est14.2 F
40AG
15.3 F
U28726est14.2 F to 16.4 F
80AG
U50631est14.2 F to 16.4 F
111AG
15.85 F
45.MMHAP33FLG6.seqrandom15.3 P to 16.4 F
86TC
16.4 F
44.MHAa63d8.seqrandom16.4 F
30AG
17.5 F
02.MMHAP64FRA8.seqrandom17.5 P to 17.5 F
37GA
77GA
121TC
29.5 F
03.MMHAP35FRA9.seqrandom29.5 F
50GT
04.MMHAP9FLB1.seqrandom29.5 F
51TG
34.MMHAP75FRD10.seqrandom29.5 F
57AG
77AC
87GA
32.8 F
MHAa54d6.seqrandom32.8 F
40GC
69CA
35.0 F
U11075est35.0 F
95GA
44.25 P
10.MMHAP30FLD1.seqrandom42.6 P to 45.9 P
79TC
Chr16
3.3 F
Results_ER_9_1_95_2_24.seqrandom3.3 F
140TG
4.4 F
R74919est4.4 F
28GA
82AG
4.4 P
D16Mit192.2genetic marker4.4 P
89CA
25.1 P
38.MMHAP44FLE5.seqrandom25.1 P
61GT
81TC
118CT
27.3 F
U19380est27.3 F
138TA
29.5 F
D16Mit138.1genetic marker29.5 F
29AG
34.45 F
Results_ER_8_29_95_1_16.seqrandom33.9 F to 35.0 F
80TC
45.9 F
MHAa21c11.seqrandom45.9 F
143TA
51.4 P
MHAa29a8.seqrandom51.4 P
62TC
74TA
Chr17
2.75 F
L00653est2.2 F to 3.3 F
72AC
10.9 F
15.MMHAP54FLE3.seqrandom10.9 F
150AC
14.2 F
D18369est14.2 F
121AT
33.9 F
30.MMHAP66FLB6.seqrandom33.9 F
130CT
mHAa21e8.seqrandom33.9 F to 33.9 P
155GT
Chr18
9.8 F
14.MMHAP9FRE8.seqrandom9.8 F
24CT
41TG
60GA
74AT
85TC
MHAa84h6.seqrandom9.8 F
132CA
X58995est9.8 F to 9.8 P
39TA
9.8 P
21.MMHAP54FLG3.seqrandom9.8 P
24AG
40.MMHAP11FRF10.seqrandom9.8 P
101GT
25.1 F
28.MMHAP7FRB10.seqrandom25.1 F
42GC
37.2 P
D18Mit216.1genetic marker37.2 P
23TC
Chr19
13.1 F
MHAa78g8.seqrandom13.1 F
42AG
16.95 F
47.MMHAP5FLH5.seqrandom16.4 P to 17.5 F
85GA
17.5 F
08.MMHAP17FRC8.seqrandom17.5 F
104TC
57.9 F
X84651est57.9 F
148GA
ChrX
21.9 F
34.MMHAP28FLD4.seqrandom21.9 F
151CT
29.5 P
12_5_11_6.seqrandom29.5 P
73AG
56.4206 P
32.MMHAP94FLC5.seqrandom56.4206 P
85CT

For further information contact:

Kerstin Lindblad-Toh