Data, Software and Tools
Project | Type |
---|---|
CTD^2 Dashboard | Portals, Cancer, cell line profiling, small molecules, Therapeutic Response |
CTD^2 Data Portal | |
CTD^2 Data Portal, Broad Datasets | cell line profiling, Downloads, Therapeutic Response, small molecules, Cancer, Portals |
Dasypus novemcinctus (Nine-banded Armadillo) | |
Data Donation Platform (DDP) | |
Data Use Oversight System (DUOS) | |
DEMETER2 | RNAi, shRNA, gene dependency, data integration |
DISCOVAR | variant calling, genome assembly |
Dog Genome Project | Mammals |
Drosophila sechellia | |
Drug Repurposing Hub | small molecules, drugs, therapeutics, compounds, Portals |
EIGENSTRAT | Genetic Analysis, GWAS |
Ensembl | |
Equus caballus (Horse) | Mammals |
Exome Enrichment Automation | Next Generation Tools, Automation |
FireBrowse | Cancer, Cancer Genome Analysis, TCGA, GDAC, Proteomics, cancer portals, visualization, CPTAC, pipeline |
FRESCo | viral |
FGI | FUNGI |
Gasterosteus aculeatus (Stickleback) | Models |
Gene Set Enrichment Analysis | Expression Analysis, Pathway Analysis, mutation, significance |
GENE-E | Sequence Analysis, RNAi |
GeneHunter | Genetic Analysis, Linkage Analysis |
GenePattern | Tool Suites, snp analysis, RNAi, Proteomics, genetic variation, Gene Expression, RNA-Seq, data visualization |
GenePattern Notebooks | GenePattern, data visualization, IGV, Tool Suites, genomic analysis, interactive notebooks |
Genome Analysis Toolkit (GATK) | Genetic Analysis, Next Generation Tools, Tool Suites |