Data, Software and Tools
| Project | Type |
|---|---|
| CERES | CRISPR, gene dependency, Cas9, sgRNA, Cutting Toxicity |
| ChemBank | Portals |
| ChimeraSlayer | Sequence Analysis, Tool Suites |
| http://trinityrnaseq.sourceforge.net/ | RNA-Seq, de Bruijn graphs, clustering |
| Ciona savignyi | |
| CLUMPS | Cancer, protein structure, mutation clustering, Cancer Genome Analysis |
| ComSeq | Sequence Analysis, Next Generation Tools |
| Connectivity Map | Expression Analysis, Annotation, Portals, CMap, perturbations, Gene Expression |
| ContEst | Sequence Analysis, Cancer Genome Analysis, sample contamination |
| Cromwell Workflow Engine | Computational biology and bioinformatics |
| CTD^2 Dashboard | Portals, Cancer, cell line profiling, small molecules, Therapeutic Response |
| CTD^2 Data Portal | |
| CTD^2 Data Portal, Broad Datasets | cell line profiling, Downloads, Therapeutic Response, small molecules, Cancer, Portals |
| D-ToxoG | Cancer Genome Analysis, Sequence Analysis, mutation calling |
| Dasypus novemcinctus (Nine-banded Armadillo) | |
| de-TiN | Cancer Genome Analysis, Cancer, Sequence Analysis |
| DEMETER2 | RNAi, shRNA, gene dependency, data integration |
| Differentiation Map Portal (DMAP) | Portals, hematopoiesis, DMAP, differentiation map, cancer portals |
| DISCOVAR | variant calling, genome assembly |
| Dog Genome Project | Mammals |
| dRanger | Cancer Genome Analysis, rearrangements, Sequence Analysis |
| Drosophila persimilis | |
| Drosophila sechellia | |
| Drug Repurposing Hub | small molecules, drugs, therapeutics, compounds, Portals |
| Echinops telfairi (Tenrec) | Mammals |