Data, Software and Tools
Project | Type |
---|---|
ABSOLUTE | copy number, mutation, Cancer Genome Analysis |
All of Us Researcher Workbench | |
ALLPATHS | Sequence Analysis, Assembly |
AmosCmp16Spipeline | Sequence Analysis, Assembly, Tool Suites |
Anolis carolinensis (Anole) | |
Anopheles | |
Aplysia californica (Aplysia) | |
Arachne | Sequence Analysis, Assembly |
ATHLATES | viral, Next Generation Tools, HLA, genetic variation, exome sequencing |
AssembleViral454 | viral, Next Generation Tools, Assembly, AssembleViral454 |
Birdsuite | Genetic Analysis |
Broad Bioimage Benchmark Collection | Imaging |
CCLE | cell lines, CCLE, cancer portals, cancer models, Cancer, cancer dependency, dependency map, cell line profiling |
Cancer Dependency Map | cell line profiling, Cancer, cancer dependency, dependency map, cancer portals, achilles, CRISPR, CCLE |
Cancer Therapeutics Response Portal (CTRP) | Cancer, cell line profiling, Portals, small molecules, Therapeutic Response |
Cell STRAINER | cell lines, Cancer, copy number variation, genomic instability, genomics |
CellProfiler | Image Analysis, Tool Suites |
CellProfiler Analyst | Image Analysis, Tool Suites |
CERES | CRISPR, gene dependency, Cas9, sgRNA, Cutting Toxicity |
ChimeraSlayer | Sequence Analysis, Tool Suites |
https://trinityrnaseq.sourceforge.net/ | RNA-Seq, de Bruijn graphs, clustering |
Ciona savignyi | |
CLUMPS | Cancer, protein structure, mutation clustering, Cancer Genome Analysis |
Connectivity Map | Expression Analysis, Annotation, Portals, CMap, perturbations, Gene Expression |
Cromwell Workflow Engine | Computational biology and bioinformatics |