RE1/NRSE nrse_chr16_2958932_p

nrse_chr16_2958932_p:


1. Alignment in human/mouse/rat/dog

GenomeSequenceLog-odds scoreZ-scoreGenome browser
hg17GGCAGCACCTTGGACAGAGCCC23.385.87chr16:2958932-2958953
mm5AGCAGCACCTTGGACAGAGTCT21.805.69chr17:22335617-22335638
rn3AGCAGCACCTTGGACAGTGTCT20.995.61chr10:12997657-12997678
canFam1GGCAGCACCTTGGACAGAGCCC23.385.81chr6:39822699-39822720

2. Genes near the element

DistanceGeneDescription
-96727BC018782Tumor necrosis factor alpha-inducing factor delta isoform.
-96381IL32interleukin 32 isoform A
-96381BC009401Tumor necrosis factor alpha-inducing factor delta isoform.
-78600MMPL1matrix metalloproteinase-like 1
-77750MMP25matrix metalloproteinase 25
-63550AK128093Hypothetical protein FLJ46214.
-55161WDR58WD repeat domain 58
-55161BC050674MGC2655 protein.
-55133AK075330Hypothetical protein PSEC0006.
-51428TNFRSF12Atype I transmembrane protein Fn14
-44197CLDN9claudin 9
-43525AK091002HCTP4-binding protein.
-666PAQR4progestin and adipoQ receptor family member IV
-627AK092173Splice isoform 3 of Q8N4S7
-613AK054564Splice isoform 2 of Q8N4S7
4715KREMEN2kringle-containing transmembrane protein 2
11522PKMYT1protein kinase Myt1 isoform 1
32406AK055777Hypothetical protein FLJ45302.
34050AK127235Hypothetical protein FLJ45302.
35782AL136585FLYWCH1 protein.
49210CLDN6claudin 6
55335HCFC1R1host cell factor C1 regulator 1 (XPO1 dependant)
56952FLYWCH1FLYWCH-type zinc finger 1 isoform a
56952BC028572FLYWCH1 protein.
64051AL833749Hypothetical protein DKFZp666L166.
85614LOC114984hypothetical protein LOC114984