Downloads

Pathseq latest version: version 1.4 (updated Apr, 2014)

  • Click here to obtain the latest release of Pathseq pipeline.

    Update:
    S3CMD command linehas been updated
    Please contact us, if you have questions

  • Click here to obtain sample input file to run PathSeq pipeline.
Pathseq latest version: version 1.3 (updated Feb, 2014)
  • Click here to obtain the latest release of Pathseq pipeline.

    Update:
    S3CMD has been updated
    Please contact us, if you have questions

  • Click here to obtain sample input file to run PathSeq pipeline.
Pathseq latest version: version 1.2 (updated Agust, 2012)
  • Click here to obtain the latest release of Pathseq pipeline.

    Update: BWA aligner replaces the MAQ aligner
    S3CMD has been updated
    Added new datatype called DATATYPE (WGS/RNASEQ). This helps the pipeline to select the databases (reference genomes)
    Hadoop framework has been updated to 1.0.3
    Please contact us, if you have questions

  • Click here to obtain sample input file to run PathSeq pipeline.
Pathseq latest version: (updated July 28, 2011)
  • Click here to obtain the latest release of Pathseq pipeline.

    Update: Base AMI has been replaced with new base AMI.
    Note: This won't effect the users who already created their own AMI's using create_ownAMI.com script with the package.
    Please contact us, if you have questions

  • Click here to obtain sample input file to run PathSeq pipeline.
Pathseq old versions:
  • Click here to obtain the latest release of Pathseq pipeline.












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