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@BioStarQuestion This request has been replied to by a GenePattern team member t.co/nrbI4QVtCZ
HierarchicalClusteringViewer has been updated for Java 7 compatibility. t.co/zGMJBBMpPB #bioinformatics
RankNormalize released: transform array data to help compare datasets from different platforms t.co/zGMJBBMpPB #bioinformatics
Well written article on Best Practices for Scientific Computing t.co/3t8RquGpW2 worth the read and continued thought.
GSEALeadingEdgeViewer has been updated for Java 7 compatibility.
Visualize your GSEA results. t.co/zGMJBBMpPB #bioinformatics
ssGSEAProjection updated: Single Sample GSEA. Now with v3.1 MSigDB gene set databases. t.co/MW2ONHID #GSEA #bioinformatics
Using GENE-E in GenePattern to create a heat map with data from @InSilicoDB t.co/zapLCLLD #bioinformatics #howto
Copy Number Inference Pipeline - generate segmented copy num data from Affy SNP6 chips. t.co/MW2ONHID #bioinformatics #TCGA
MAGETABImportViewer updated: convert MAGE-TAB files for use in GenePattern. t.co/MW2ONHID #bioinformatics @FGED
RT @InSilicoDB: Newly Minted InSilico Genomics to Commercialize Genomic Data Hub, Offer RNA-seq Analysis Services t.co/dOMiJ7dx
Top rated modulesModule Tags
NGS
Visualizer
chip
Log Transformation
k-means
gene expression
gct
Bisulfite Sequencing
identifier
Gene List Selection
Data Format Conversion
Preprocess and Utilities
Percent P call
Mapping
microarray
SAGE
File Conversion
Detection P value
TCGA
Prediction
Correlation
Clustering
Survival Analysis
Annotation
Row By Column
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Survival Gene Example data 