Version 3.0, 7 October 2004
- Bugfixes for block size display, checkdata tab, allele sorting, EM missing data.
- Added compressed PNG output mode.
- Lots of new command line options.
- Changed batch mode input format.
- Re-sort out of order info files.
- Substantial improvement in speed and memory usage in EM.
- New color schemes.
- Added additional sample information for 2nd and 3rd HapMap plate.
- Fixed handling of complex pedigrees.
- Added proportional spacing to LD display.
- Added HapMap GBrowse track.
- Filter individuals with lots of missing genotypes.
- Haplotype association tests.
- Update checker.
