Construct: shRNA TRCN0000231764

Construct Description:

Construct Type:
shRNA
Other Identifiers:
clonetechGfp_692s21c1
DNA Barcode:
CTCTCGGCATGGACGAGCTGT

Original Target:

Taxon:
Control
Gene:
GFP (GFP)
Gene Description:
clonetechGfp
Transcript:
Broad clonetechGfp.1 (CURRENT)
Match location:
Position 692 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000231764)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTCTCGGCATGGACGAGCTGT
Hairpin Sequence:
5'-CCGG-CTCTCGGCATGGACGAGCTGT-CTCGAG-ACAGCTCGTCCATGCCGAGAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTCTCGGCATGGACGAGCTGTCTCGAGACAGCTCGTCCATGCCGAGAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTCTCGGCATGGACGAGCTGTCTCGAGACAGCTCGTCCATGCCGAGAG-3'

Other clones with same target sequence:

  1. TRCN0000072187