Construct: shRNA TRCN0000175841

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009168.1-568s1c1
DNA Barcode:
GAAGCAGAAACTGAGTACTCA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Shd (20420)
Gene Description:
src homology 2 domain-containing transforming protein D
Transcript:
RefSeq NM_009168.1 (NON-CURRENT)
Match location:
Position 568 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000175841)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAAGCAGAAACTGAGTACTCA
Hairpin Sequence:
5'-CCGG-GAAGCAGAAACTGAGTACTCA-CTCGAG-TGAGTACTCAGTTTCTGCTTC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAAGCAGAAACTGAGTACTCACTCGAGTGAGTACTCAGTTTCTGCTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAAGCAGAAACTGAGTACTCACTCGAGTGAGTACTCAGTTTCTGCTTC-3'

Other clones with same target sequence:

(none)