Construct: shRNA TRCN0000089425

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009131.1-410s1c1
DNA Barcode:
AGCACCTTCTTCTAGTCCCAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Clec11a (20256)
Gene Description:
C-type lectin domain family 11, member a
Transcript:
RefSeq NM_009131.1 (NON-CURRENT)
Match location:
Position 410 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000089425)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGCACCTTCTTCTAGTCCCAA
Hairpin Sequence:
5'-CCGG-AGCACCTTCTTCTAGTCCCAA-CTCGAG-TTGGGACTAGAAGAAGGTGCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGCACCTTCTTCTAGTCCCAACTCGAGTTGGGACTAGAAGAAGGTGCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGCACCTTCTTCTAGTCCCAACTCGAGTTGGGACTAGAAGAAGGTGCT-3'

Other clones with same target sequence:

(none)