Construct: shRNA TRCN0000072219
- Construct Type:
- Other Identifiers:
- DNA Barcode:
- RFP (-12)
- Gene Description:
- tsien lab genbank rfp.1 (CURRENT)
- Match location:
- Position 576 (CDS)
Current transcripts matched by this hairpin:
||SDR Match %[?]Percent match of the "Specificity-Defining Region" of the hairpin target sequence to transcript RNA sequence. The SDR is defined as the initial 19 bases of the (21mer) target sequence.
|84%|| = 16/19|
|89%|| = 17/19|
|95%|| = 18/19|
|100%|| = 19/19||Region
||Start Pos.[?]Start position of hairpin's match to the targetted transcript sequence (1-based).
||Intrinsic Score[?]Also called "original score", this assesses the target sequence for predicted cloneability and knockdown performance.
||Adjusted Score[?]Also called "specificity score", this is a function of the intrinsic score and the specificity factor.
- Target Sequence:
- Hairpin Sequence:
Oligo design for arrayed cloning:
- Forward sequence:
- Reverse sequence:
Other clones with same target sequence: