Construct: shRNA TRCN0000054657

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_011097.1-833s1c1
DNA Barcode:
CATGAGCATGAGAGAGGAGAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Pitx1 (18740)
Gene Description:
paired-like homeodomain transcription factor 1
Transcript:
RefSeq NM_011097.1 (NON-CURRENT)
Match location:
Position 833 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000054657)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CATGAGCATGAGAGAGGAGAT
Hairpin Sequence:
5'-CCGG-CATGAGCATGAGAGAGGAGAT-CTCGAG-ATCTCCTCTCTCATGCTCATG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCATGAGCATGAGAGAGGAGATCTCGAGATCTCCTCTCTCATGCTCATGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACATGAGCATGAGAGAGGAGATCTCGAGATCTCCTCTCTCATGCTCATG-3'

Other clones with same target sequence:

(none)