Construct: shRNA TRCN0000039609

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001469.2-1135s1c1
DNA Barcode:
GATGAGTCATAAGAGGATCAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
XRCC6 (2547)
Gene Description:
X-ray repair cross complementing 6
Transcript:
RefSeq NM_001469.2 (NON-CURRENT)
Match location:
Position 1135 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000039609)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GATGAGTCATAAGAGGATCAT
Hairpin Sequence:
5'-CCGG-GATGAGTCATAAGAGGATCAT-CTCGAG-ATGATCCTCTTATGACTCATC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGATGAGTCATAAGAGGATCATCTCGAGATGATCCTCTTATGACTCATCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGATGAGTCATAAGAGGATCATCTCGAGATGATCCTCTTATGACTCATC-3'

Other clones with same target sequence:

  1. TRCN0000332901