Construct: shRNA TRCN0000034888
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_024656.2-835s1c1
- DNA Barcode:
- CAGGCAGAGGTTCAGATGTAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- COLGALT1 (79709)
- Gene Description:
- collagen beta(1-O)galactosyltransferase 1
- Transcript:
- RefSeq NM_024656.2 (NON-CURRENT)
- Match location:
- Position 835 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000034888)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CAGGCAGAGGTTCAGATGTAT
- Hairpin Sequence:
-
5'-CCGG-CAGGCAGAGGTTCAGATGTAT-CTCGAG-ATACATCTGAACCTCTGCCTG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCAGGCAGAGGTTCAGATGTATCTCGAGATACATCTGAACCTCTGCCTGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACAGGCAGAGGTTCAGATGTATCTCGAGATACATCTGAACCTCTGCCTG-3'
Other clones with same target sequence:
(none)