Construct: shRNA TRCN0000221616

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001533.1-1249s1c2, TRCN0000017245, NM_001533.1-1249s1c1
DNA Barcode:
CCTCAACAACAACTTCATGTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
HNRNPL (3191)
Gene Description:
heterogeneous nuclear ribonucleoprotein L
Transcript:
RefSeq NM_001533.1 (NON-CURRENT)
Match location:
Position 1249 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000221616)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTCAACAACAACTTCATGTT
Hairpin Sequence:
5'-CCGG-CCTCAACAACAACTTCATGTT-CTCGAG-AACATGAAGTTGTTGTTGAGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTCAACAACAACTTCATGTTCTCGAGAACATGAAGTTGTTGTTGAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTCAACAACAACTTCATGTTCTCGAGAACATGAAGTTGTTGTTGAGG-3'

Other clones with same target sequence:

  1. TRCN0000330564