Construct: shRNA TRCN0000015414

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_007084.2-347s1c1
DNA Barcode:
CAAGAAGGACAAGTTCGCCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SOX21 (11166)
Gene Description:
SRY-box transcription factor 21
Transcript:
RefSeq NM_007084.2 (NON-CURRENT)
Match location:
Position 347 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000015414)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAAGAAGGACAAGTTCGCCTT
Hairpin Sequence:
5'-CCGG-CAAGAAGGACAAGTTCGCCTT-CTCGAG-AAGGCGAACTTGTCCTTCTTG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAAGAAGGACAAGTTCGCCTTCTCGAGAAGGCGAACTTGTCCTTCTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAAGAAGGACAAGTTCGCCTTCTCGAGAAGGCGAACTTGTCCTTCTTG-3'

Other clones with same target sequence:

(none)