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2007
Metagene projection for cross-platform, cross-species characterization of global transcriptional statesTamayo, Pablo, Scanfeld Daniel, Ebert Benjamin L., Gillette Michael A., Roberts Charles W. M., and Mesirov Jill P. Proceedings of the National Academy of Sciences of the United States of America, 2007/04/03/, Volume 104, Issue 14, p.5959 - 64, (2007) Read More / View Supplemental Materials
Abstract
Portraits of breast cancer progressionDalgin, Gul S., Alexe Gabriela, Scanfeld Daniel, Tamayo Pablo, Mesirov Jill P., Ganesan Shridar, DeLisi Charles, and Bhanot Gyan BMC Bioinformatics, 2007///, Volume 8, p.291 - 291, (2007) Read More / View Supplemental Materials
Abstract
2006
Gene expression profiling reveals reproducible human lung adenocarcinoma subtypes in multiple independent patient cohortsHayes, Neil D., Monti Stefano, Parmigiani Giovanni, Gilks Blake C., Naoki Katsuhiko, Bhattacharjee Arindam, Socinski Mark A., Perou Charles, and Meyerson Matthew Journal of Clinical Oncology: Official Journal of the American Society of Clinical Oncology, 2006/11/01/, Volume 24, Issue 31, p.5079 - 90, (2006) Read More / View Supplemental Materials
Abstract
Comparative gene marker selection suiteGould, Joshua, Getz Gad, Monti Stefano, Reich Michael, and Mesirov Jill P. Bioinformatics (Oxford, England), 2006/08/01/, Volume 22, Issue 15, p.1924 - 5, (2006) Read More / View Supplemental Materials
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2005
Allele-specific amplification in cancer revealed by SNP array analysisLaFramboise, Thomas, Weir Barbara A., Zhao Xiaojun, Beroukhim Rameen, Li Cheng, Harrington David, Sellers William R., and Meyerson Matthew PLoS Computational Biology, 2005/11//, Volume 1, Issue 6, p.e65 - e65, (2005) Read More / View Supplemental Materials
Abstract
Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profilesSubramanian, Aravind, Tamayo Pablo, Mootha Vamsi K., Mukherjee Sayan, Ebert Benjamin L., Gillette Michael A., Paulovich Amanda, Pomeroy Scott L., Golub Todd R., Lander Eric S., and Mesirov Jill P. Proceedings of the National Academy of Sciences of the United States of America, 2005/10/25/, Volume 102, Issue 43, p.15545 - 50, (2005) Read More / View Supplemental Materials
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GeneCruiser: a web service for the annotation of microarray dataLiefeld, Ted, Reich Michael, Gould Joshua, Zhang Peili, Tamayo Pablo, and Mesirov Jill P. Bioinformatics (Oxford, England), 2005/09/15/, Volume 21, Issue 18, p.3681 - 2, (2005) Read More / View Supplemental Materials
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2004
GeneCluster 2.0: an advanced toolset for bioarray analysisReich, M., Ohm K., Angelo M., Tamayo P., and Mesirov J. P. Bioinformatics (Oxford, England), 2004/07/22/, Volume 20, Issue 11, p.1797 - 8, (2004) Read More / View Supplemental Materials
Abstract
dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity dataLin, Ming, Wei Lee-Jen, Sellers William R., Lieberfarb Marshall, Wong Wing Hung, and Li Cheng Bioinformatics (Oxford, England), 2004/05/22/, Volume 20, Issue 8, p.1233 - 40, (2004) Read More / View Supplemental Materials
Abstract
Combining gene expression profiles and clinical parameters for risk stratification in medulloblastomasFernandez-Teijeiro, Ana, Betensky Rebecca A., Sturla Lisa M., Kim John Y. H., Tamayo Pablo, and Pomeroy Scott L. Journal of Clinical Oncology: Official Journal of the American Society of Clinical Oncology, 2004/03/15/, Volume 22, Issue 6, p.994 - 8, (2004) Read More / View Supplemental Materials
Abstract
Genome coverage and sequence fidelity of phi29 polymerase-based multiple strand displacement whole genome amplificationPaez, Guillermo J., Lin Ming, Beroukhim Rameen, Lee Jeffrey C., Zhao Xiaojun, Richter Daniel J., Gabriel Stacey, Herman Paula, Sasaki Hidefumi, Altshuler David, Li Cheng, Meyerson Matthew, and Sellers William R. Nucleic Acids Research, 2004///, Volume 32, Issue 9, p.e71 - e71, (2004) Read More / View Supplemental Materials
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2003
A mechanism of cyclin D1 action encoded in the patterns of gene expression in human cancerLamb, Justin, Ramaswamy Sridhar, Ford Heide L., Contreras Bernardo, Martinez Robert V., Kittrell Frances S., Zahnow Cynthia A., Patterson Nick, Golub Todd R., and Ewen Mark E. Cell, 2003/08/08/, Volume 114, Issue 3, p.323 - 34, (2003) Read More / View Supplemental Materials
Abstract
PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetesMootha, Vamsi K., Lindgren Cecilia M., Eriksson Karl-Fredrik, Subramanian Aravind, Sihag Smita, Lehar Joseph, Puigserver Pere, Carlsson Emma, and Ridderstr Nature Genetics, 2003/07//, Volume 34, Issue 3, p.267 - 73, (2003) Read More / View Supplemental Materials
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DNA microarrays in breast cancer: the promise of personalised medicineRamaswamy, Sridhar, and Perou Charles M. Lancet, 2003/05/10/, Volume 361, Issue 9369, p.1576 - 7, (2003) Read More / View Supplemental Materials
Estimating dataset size requirements for classifying DNA microarray dataMukherjee, Sayan, Tamayo Pablo, Rogers Simon, Rifkin Ryan, Engle Anna, Campbell Colin, Golub Todd R., and Mesirov Jill P. Journal of Computational Biology: A Journal of Computational Molecular Cell Biology, 2003///, Volume 10, Issue 2, p.119 - 42, (2003) Read More / View Supplemental Materials
Abstract
2002
The Ewing's sarcoma oncoprotein EWS/FLI induces a p53-dependent growth arrest in primary human fibroblastsLessnick, Stephen L., Dacwag Caroline S., and Golub Todd R. Cancer Cell, 2002/05//, Volume 1, Issue 4, p.393 - 401, (2002) Read More / View Supplemental Materials
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DNA microarrays in clinical oncologyRamaswamy, Sridhar, and Golub Todd R. Journal of Clinical Oncology: Official Journal of the American Society of Clinical Oncology, 2002/04/01/, Volume 20, Issue 7, p.1932 - 41, (2002) Read More / View Supplemental Materials
Abstract
Prediction of central nervous system embryonal tumour outcome based on gene expressionPomeroy, Scott L., Tamayo Pablo, Gaasenbeek Michelle, Sturla Lisa M., Angelo Michael, McLaughlin Margaret E., Kim John Y. H., Goumnerova Liliana C., Black Peter M., Lau Ching, Allen Jeffrey C., Zagzag David, Olson James M., Curran Tom, Wetmore Cynthia, and Biegel Jacly Nature, 2002/01/24/, Volume 415, Issue 6870, p.436 - 42, (2002) Read More / View Supplemental Materials
Abstract
Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learningShipp, Margaret A., Ross Ken N., Tamayo Pablo, Weng Andrew P., Kutok Jeffery L., Aguiar Ricardo C. T., Gaasenbeek Michelle, Angelo Michael, Reich Michael, Pinkus Geraldine S., Ray Tane S., Koval Margaret A., Last Kim W., Norton Andrew, Lister Andrew T., and Mesirov Jill Nature Medicine, 2002/01//, Volume 8, Issue 1, p.68 - 74, (2002) Read More / View Supplemental Materials
Abstract
A strategy for oligonucleotide microarray probe reductionAntipova, Alena A., Tamayo Pablo, and Golub Todd R. Genome Biology, 2002///, Volume 3, Issue 12, p.RESEARCH0073 - RESEARCH0073, (2002) Read More / View Supplemental Materials
Abstract
2001
Chemosensitivity prediction by transcriptional profilingStaunton, J. E., Slonim D. K., Coller H. A., Tamayo P., Angelo M. J., Park J., Scherf U., Lee J. K., Reinhold W. O., Weinstein J. N., Mesirov J. P., Lander E. S., and Golub T. R. Proceedings of the National Academy of Sciences of the United States of America, 2001/09/11/, Volume 98, Issue 19, p.10787 - 92, (2001) Read More / View Supplemental Materials
Abstract
Genome-wide views of cancerGolub, T. R. The New England Journal of Medicine, 2001/02/22/, Volume 344, Issue 8, p.601 - 2, (2001) Read More / View Supplemental Materials
Genome-wide views of cancerGolub, T. R. The New England Journal of Medicine, 2001/02/22/, Volume 344, Issue 8, p.601 - 2, (2001) Read More / View Supplemental Materials
2000
Loss-of-heterozygosity analysis of small-cell lung carcinomas using single-nucleotide polymorphism arraysLindblad-Toh, K., Tanenbaum D. M., Daly M. J., Winchester E., Lui W. O., Villapakkam A., Stanton S. E., Larsson C., Hudson T. J., Johnson B. E., Lander E. S., and Meyerson M. Nature Biotechnology, 2000/09//, Volume 18, Issue 9, p.1001 - 5, (2000) Read More / View Supplemental Materials
Abstract
1999
Molecular classification of cancer: class discovery and class prediction by gene expression monitoringGolub, T. R., Slonim D. K., Tamayo P., Huard C., Gaasenbeek M., Mesirov J. P., Coller H., Loh M. L., Downing J. R., Caligiuri M. A., Bloomfield C. D., and Lander E. S. Science (New York, N.Y.), 1999/10/15/, Volume 286, Issue 5439, p.531 - 7, (1999) Read More / View Supplemental Materials
Abstract
  • Showing 1-25 of 25 Results