Genome-wide association analysis identifies novel loci for chronotype in 100,420 individuals from the UK Biobank.

Nat Commun
Authors
Keywords
Abstract

Our sleep timing preference, or chronotype, is a manifestation of our internal biological clock. Variation in chronotype has been linked to sleep disorders, cognitive and physical performance, and chronic disease. Here we perform a genome-wide association study of self-reported chronotype within the UK Biobank cohort (n=100,420). We identify 12 new genetic loci that implicate known components of the circadian clock machinery and point to previously unstudied genetic variants and candidate genes that might modulate core circadian rhythms or light-sensing pathways. Pathway analyses highlight central nervous and ocular systems and fear-response-related processes. Genetic correlation analysis suggests chronotype shares underlying genetic pathways with schizophrenia, educational attainment and possibly BMI. Further, Mendelian randomization suggests that evening chronotype relates to higher educational attainment. These results not only expand our knowledge of the circadian system in humans but also expose the influence of circadian characteristics over human health and life-history variables such as educational attainment.

Year of Publication
2016
Journal
Nat Commun
Volume
7
Pages
10889
Date Published
2016 Mar 09
ISSN
2041-1723
URL
DOI
10.1038/ncomms10889
PubMed ID
26955885
PubMed Central ID
PMC4786869
Links
Grant list
R01 HL113338 / HL / NHLBI NIH HHS / United States
R01HL113338-04 / HL / NHLBI NIH HHS / United States
F32DK102323-01A1 / DK / NIDDK NIH HHS / United States
MC_PC_15018 / Medical Research Council / United Kingdom
F32 DK102323 / DK / NIDDK NIH HHS / United States
R21HL121728-02 / HL / NHLBI NIH HHS / United States
R21 HL121728 / HL / NHLBI NIH HHS / United States
MC_UU_12013/5 / Medical Research Council / United Kingdom