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A genome-wide association study identifies a functional ERAP2 haplotype associated with birdshot chorioretinopathy.
|Publication Type||Journal Article|
|Authors||Kuiper, JJ, van Setten J., Ripke S., Van't Slot R., Mulder F., Missotten T., Baarsma GS, Francioli LC, Pulit SL, de Kovel CG, Ten Dam-van Loon N., den Hollander AI, Huis In Het Veld P., Hoyng CB, Cordero-Coma M., Martín J., Llorenç V., Arya B., Thomas D., Bakker SC, Ophoff RA, Rothova A., de Bakker PI, Mutis T., and Koeleman BP|
|Abstract||Birdshot chorioretinopathy (BSCR) is a rare form of autoimmune uveitis that can lead to severe visual impairment. Intriguingly, >95% of cases carry the HLA-A29 allele, which defines the strongest documented HLA association for a human disease. We have conducted a genome-wide association study in 96 Dutch and 27 Spanish cases, and 398 unrelated Dutch and 380 Spanish controls. Fine-mapping the primary MHC association through high-resolution imputation at classical HLA loci, identified HLA-A*29:02 as the principal MHC association (odds ratio (OR) = 157.5, 95% CI 91.6-272.6, P = 6.6 × 10(-74)). We also identified two novel susceptibility loci at 5q15 near ERAP2 (rs7705093; OR = 2.3, 95% CI 1.7-3.1, for the T allele, P = 8.6 × 10(-8)) and at 14q32.31 in the TECPR2 gene (rs150571175; OR = 6.1, 95% CI 3.2-11.7, for the A allele, P = 3.2 × 10(-8)). The association near ERAP2 was confirmed in an independent British case-control samples (combined meta-analysis P = 1.7 × 10(-9)). Functional analyses revealed that the risk allele of the polymorphism near ERAP2 is strongly associated with high mRNA and protein expression of ERAP2 in B cells. This study further defined an extremely strong MHC risk component in BSCR, and detected evidence for a novel disease mechanism that affects peptide processing in the endoplasmic reticulum.|
|Year of Publication||2014|
|Journal||Human molecular genetics|
|Date Published (YYYY/MM/DD)||2014/06/22|