Scientific Publications

Nozzle: a report generation toolkit for data analysis pipelines.

Publication TypeJournal Article
AuthorsGehlenborg, N., Noble MS, Getz G., Chin L., and Park PJ
AbstractSUMMARY: We have developed Nozzle, an R package that provides an Application Programming Interface to generate HTML reports with dynamic user interface elements. Nozzle was designed to facilitate summarization and rapid browsing of complex results in data analysis pipelines where multiple analyses are performed frequently on big datasets. The package can be applied to any project where user-friendly reports need to be created. AVAILABILITY: The R package is available on CRAN at http://cran.r-project.org/package=Nozzle.R1. Examples and additional materials are available at http://gdac.broadinstitute.org/nozzle. The source code is also available at http://www.github.com/parklab/Nozzle. CONTACT: peter_park@hms.harvard.edu SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Year of Publication2013
JournalBioinformatics (Oxford, England)
Date Published (YYYY/MM/DD)2013/03/11
ISSN Number1367-4803
DOI10.1093/bioinformatics/btt085
PubMedhttp://www.ncbi.nlm.nih.gov/pubmed/23419376?dopt=Abstract