Scientific Publications

Next-generation sequencing for HLA typing of class I loci.

Publication TypeJournal Article
AuthorsErlich, RL, Jia X., Anderson S., Banks E., Gao X., Carrington M., Gupta N., DePristo MA, Henn MR, Lennon NJ, and de Bakker PI
AbstractComprehensive sequence characterization across the MHC is important for successful organ transplantation and genetic association studies. To this end, we have developed an automated sample preparation, molecular barcoding and multiplexing protocol for the amplification and sequence-determination of class I HLA loci. We have coupled this process to a novel HLA calling algorithm to determine the most likely pair of alleles at each locus.
Year of Publication2011
JournalBMC genomics
Date Published (YYYY/MM/DD)2011/01/18