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2014
Inflammatory Bowel Disease as a Model for Translating the Microbiome.Huttenhower, C., Kostic AD, and Xavier RJ Immunity, 2014/06/19, Volume 40, Issue 6, p.843-854, (2014) Read More / View Supplemental Materials
Abstract
Relating the metatranscriptome and metagenome of the human gut.Franzosa, EA, Morgan XC, Segata N., Waldron L., Reyes J., Earl AM, Giannoukos G., Boylan MR, Ciulla D., Gevers D., Izard J., Garrett WS, Chan AT, and Huttenhower C. Proceedings of the National Academy of Sciences of the United States of America, 2014/05/19, (2014) Read More / View Supplemental Materials
Abstract
The treatment-naive microbiome in new-onset Crohn's disease.Gevers, D., Kugathasan S., Denson LA, Vázquez-Baeza Y., Van Treuren W., Ren B., Schwager E., Knights D., Song SJ, Yassour M., Morgan XC, Kostic AD, Luo C., González A., McDonald D., Haberman Y., Walters T., Baker S., Rosh J., Stephens M., et al. Cell host & microbe, 2014/03/12, Volume 15, Issue 3, p.382-92, (2014) Read More / View Supplemental Materials
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Functional and phylogenetic assembly of microbial communities in the human microbiome.Shafquat, A., Joice R., Simmons SL, and Huttenhower C. Trends in microbiology, 2014/03/04, (2014) Read More / View Supplemental Materials
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Gut microbiome composition and function in experimental colitis during active disease and treatment-induced remission.Rooks, MG, Veiga P., Wardwell-Scott LH, Tickle T., Segata N., Michaud M., Gallini CA, Beal C., van Hylckama-Vlieg JE, Ballal SA, Morgan XC, Glickman JN, Gevers D., Huttenhower C., and Garrett WS The ISME journal, 2014/02/06, (2014) Read More / View Supplemental Materials
Abstract
Meta'omic Analytic Techniques for Studying the Intestinal Microbiome.Morgan, XC, and Huttenhower C. Gastroenterology, 2014/01/28, (2014) Read More / View Supplemental Materials
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2013
Inferring developmental stage composition from gene expression in human malaria.Joice, R., Narasimhan V., Montgomery J., Sidhu AB, Oh K., Meyer E., Pierre-Louis W., Seydel K., Milner D., Williamson K., Wiegand R., Ndiaye D., Daily J., Wirth D., Taylor T., Huttenhower C., and Marti M. PLoS computational biology, 2013/12/01, Volume 9, Issue 12, p.e1003392, (2013) Read More / View Supplemental Materials
Abstract
MetaRef: a pan-genomic database for comparative and community microbial genomics.Huang, K., Brady A., Mahurkar A., White O., Gevers D., Huttenhower C., and Segata N. Nucleic acids research, 2013/11/06, (2013) Read More / View Supplemental Materials
Abstract
Two-stage microbial community experimental design.Tickle, TL, Segata N., Waldron L., Weingart U., and Huttenhower C. The ISME journal, 2013/08/15, (2013) Read More / View Supplemental Materials
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Concordance of gene expression in human protein complexes reveals tissue specificity and pathology.Börnigen, D., Pers TH, Thorrez L., Huttenhower C., Moreau Y., and Brunak S. Nucleic acids research, 2013/08/05, (2013) Read More / View Supplemental Materials
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2012
Expression Profiling of Archival Tumors for Long-term Health Studies.Waldron, L., Ogino S., Hoshida Y., Shima K., McCart Reed AE, Simpson PT, Baba Y., Nosho K., Segata N., Vargas AC, Cummings MC, Lakhani SR, Kirkner GJ, Giovannucci E., Quackenbush J., Golub T. R., Fuchs CS, Parmigiani G., and Huttenhower C. Clinical cancer research : an official journal of the American Association for Cancer Research, 2012/11/15, Volume 18, Issue 22, p.6136-6146, (2012) Read More / View Supplemental Materials
Abstract
Bioinformatics for the human microbiome project.Gevers, D., Pop M., Schloss PD, and Huttenhower C. PLoS computational biology, 2012/11/01, Volume 8, Issue 11, p.e1002779, (2012) Read More / View Supplemental Materials
The human microbiome project: a community resource for the healthy human microbiome.Gevers, D., Knight R., Petrosino JF, Huang K., McGuire AL, Birren BW, Nelson KE, White O., Methé BA, and Huttenhower C. PLoS biology, 2012/08/01, Volume 10, Issue 8, p.e1001377, (2012) Read More / View Supplemental Materials
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2011
Genomic analysis identifies association of Fusobacterium with colorectal carcinoma.Kostic, AD, Gevers D., Pedamallu CS, Michaud M., Duke F., Earl AM, Ojesina AI, Jung J., Bass AJ, Tabernero J., Baselga J., Liu C., Shivdasani RA, Ogino S., Birren BW, Huttenhower C., Garrett WS, and Meyerson M. Genome research, 2011/10/18, (2011) Read More / View Supplemental Materials
Abstract
The genome of th17 cell-inducing segmented filamentous bacteria reveals extensive auxotrophy and adaptations to the intestinal environment.Sczesnak, A., Segata N., Qin X., Gevers D., Petrosino JF, Huttenhower C., Littman DR, and Ivanov II Cell host & microbe, 2011/09/15, Volume 10, Issue 3, p.260-72, (2011) Read More / View Supplemental Materials
Abstract
Metagenomic biomarker discovery and explanation.Segata, N., Izard J., Waldron L., Gevers D., Miropolsky L., Garrett WS, and Huttenhower C. Genome biology, 2011/06/24, Volume 12, Issue 6, p.R60, (2011) Read More / View Supplemental Materials
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  • Showing 1-16 of 16 Results