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2014
Unencapsulated Streptococcus pneumoniae from conjunctivitis encode variant traits and belong to a distinct phylogenetic cluster.Valentino, MD, McGuire AM, Rosch JW, Bispo PJ, Burnham C., Sanfilippo CM, Carter RA, Zegans ME, Beall B., Earl AM, Tuomanen EI, Morris TW, Haas W., and Gilmore MS Nature communications, 2014/11/12, Volume 5, p.5411, (2014) Read More / View Supplemental Materials
Abstract
Evolution of invasion in a diverse set of fusobacterium species.Manson McGuire, A., Cochrane K., Griggs AD, Haas BJ, Abeel T., Zeng Q., Nice JB, MacDonald H., Birren BW, Berger BW, Allen-Vercoe E., and Earl AM mBio, 2014/11/04, Volume 5, Issue 6, (2014) Read More / View Supplemental Materials
Abstract
Sporulation during growth in a gut isolate of Bacillus subtilis.Serra, CR, Earl AM, Barbosa TM, Kolter R., and Henriques AO Journal of bacteriology, 2014/09/15, (2014) Read More / View Supplemental Materials
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Draft genome sequences of six enterohepatic helicobacter species isolated from humans and one from rhesus macaques.Shen, Z., Sheh A., Young SK, Abouelliel A., Ward DV, Earl AM, and Fox JG Genome announcements, 2014/09/11, Volume 2, Issue 5, (2014) Read More / View Supplemental Materials
Abstract
Evidence of Extensive DNA Transfer between Bacteroidales Species within the Human Gut.Coyne, MJ, Zitomersky NL, McGuire AM, Earl AM, and Comstock LE mBio, 2014/06/17, Volume 5, Issue 3, (2014) Read More / View Supplemental Materials
Abstract
Relating the metatranscriptome and metagenome of the human gut.Franzosa, EA, Morgan XC, Segata N., Waldron L., Reyes J., Earl AM, Giannoukos G., Boylan MR, Ciulla D., Gevers D., Izard J., Garrett WS, Chan AT, and Huttenhower C. Proceedings of the National Academy of Sciences of the United States of America, 2014/05/19, (2014) Read More / View Supplemental Materials
Abstract
Oribacterium parvum , sp. nov. and Oribacterium asaccharolyticum sp. nov. obligately anaerobic bacteria from the human oral cavity.Sizova, MV, Muller PA Jr, Stancyk DA, Panikov NS, Mandalakis M., Hazen A., Hohmann T., Doerfert SN, Fowle W., Earl AM, Nelson KE, and Epstein SS International journal of systematic and evolutionary microbiology, 2014/05/13, (2014) Read More / View Supplemental Materials
Abstract
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.Walker, BJ, Abeel T., Shea T., Priest M., Abouelliel A., Sakthikumar S., Cuomo CA, Zeng Q., Wortman J., Young SK, and Earl AM PloS one, 2014/01/01, Volume 9, Issue 11, p.e112963, (2014) Read More / View Supplemental Materials
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2011
Genomic analysis identifies association of Fusobacterium with colorectal carcinoma.Kostic, AD, Gevers D., Pedamallu CS, Michaud M., Duke F., Earl AM, Ojesina AI, Jung J., Bass AJ, Tabernero J., Baselga J., Liu C., Shivdasani RA, Ogino S., Birren BW, Huttenhower C., Garrett WS, and Meyerson M. Genome research, 2011/10/18, (2011) Read More / View Supplemental Materials
Abstract
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons.Haas, BJ, Gevers D., Earl AM, Feldgarden M., Ward DV, Giannoukos G., Ciulla D., Tabbaa D., Highlander SK, Sodergren E., Methé B., DeSantis TZ, Human Microbiome Consortium, Petrosino JF, Knight R., and Birren BW Genome research, 2011/03/01, Volume 21, Issue 3, p.494-504, (2011) Read More / View Supplemental Materials
Abstract
2010
A catalog of reference genomes from the human microbiome.Human Microbiome Jumpstart Reference Strains, Consortium, Nelson KE, Weinstock GM, Highlander SK, Worley KC, Creasy HH, Wortman JR, Rusch DB, Mitreva M., Sodergren E., Chinwalla AT, Feldgarden M., Gevers D., Haas BJ, Madupu R., Ward DV, Birren BW, Gibbs RA, Methe B., Petrosino JF, et al. Science (New York, N.Y.), 2010/05/21, Volume 328, Issue 5981, p.994-9, (2010) Read More / View Supplemental Materials
Abstract
  • Showing 1-11 of 11 Results