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2016
The reproductive tracts of two malaria vectors are populated by a core microbiome and by gender- and swarm-enriched microbial biomarkers.Segata, N., Baldini F., Pompon J., Garrett WS, Truong DT, Dabiré RK, Diabaté A., Levashina EA, and Catteruccia F. Scientific reports, 2016/04/18, Volume 6, p.24207, (2016) Read More / View Supplemental Materials
Abstract
2015
High-Specificity Targeted Functional Profiling in Microbial Communities with ShortBRED.Kaminski, J., Gibson MK, Franzosa EA, Segata N., Dantas G., and Huttenhower C. PLoS computational biology, 2015/12/01, Volume 11, Issue 12, p.e1004557, (2015) Read More / View Supplemental Materials
Abstract
Bifidobacteria exhibit social behavior through carbohydrate resource sharing in the gut.Milani, C., Andrea Lugli G., Duranti S., Turroni F., Mancabelli L., Ferrario C., Mangifesta M., Hevia A., Viappiani A., Scholz M., Arioli S., Sanchez B., Lane J., Ward DV, Hickey R., Mora D., Segata N., Margolles A., van Sinderen D., and Ventura M. Scientific reports, 2015/10/28, Volume 5, p.15782, (2015) Read More / View Supplemental Materials
Abstract
MetaPhlAn2 for enhanced metagenomic taxonomic profiling.Truong, DT, Franzosa EA, Tickle TL, Scholz M., Weingart G., Pasolli E., Tett A., Huttenhower C., and Segata N. Nature methods, 2015/09/29, Volume 12, Issue 10, p.902-3, (2015) Read More / View Supplemental Materials
2014
Relating the metatranscriptome and metagenome of the human gut.Franzosa, EA, Morgan XC, Segata N., Waldron L., Reyes J., Earl AM, Giannoukos G., Ciulla D., Gevers D., Izard J., Garrett WS, Chan AT, and Huttenhower C. Proceedings of the National Academy of Sciences of the United States of America, 2014/06/03, Volume 111, Issue 22, p.E2329-38, (2014) Read More / View Supplemental Materials
Abstract
Gut microbiome composition and function in experimental colitis during active disease and treatment-induced remission.Rooks, MG, Veiga P., Wardwell-Scott LH, Tickle T., Segata N., Michaud M., Gallini CA, Beal C., van Hylckama-Vlieg JE, Ballal SA, Morgan XC, Glickman JN, Gevers D., Huttenhower C., and Garrett WS The ISME journal, 2014/02/06, (2014) Read More / View Supplemental Materials
Abstract
2013
MetaRef: a pan-genomic database for comparative and community microbial genomics.Huang, K., Brady A., Mahurkar A., White O., Gevers D., Huttenhower C., and Segata N. Nucleic acids research, 2013/11/06, (2013) Read More / View Supplemental Materials
Abstract
Two-stage microbial community experimental design.Tickle, TL, Segata N., Waldron L., Weingart U., and Huttenhower C. The ISME journal, 2013/08/15, (2013) Read More / View Supplemental Materials
Abstract
2012
Expression Profiling of Archival Tumors for Long-term Health Studies.Waldron, L., Ogino S., Hoshida Y., Shima K., McCart Reed AE, Simpson PT, Baba Y., Nosho K., Segata N., Vargas AC, Cummings MC, Lakhani SR, Kirkner GJ, Giovannucci E., Quackenbush J., Golub T. R., Fuchs CS, Parmigiani G., and Huttenhower C. Clinical cancer research : an official journal of the American Association for Cancer Research, 2012/11/15, Volume 18, Issue 22, p.6136-6146, (2012) Read More / View Supplemental Materials
Abstract
2011
The genome of th17 cell-inducing segmented filamentous bacteria reveals extensive auxotrophy and adaptations to the intestinal environment.Sczesnak, A., Segata N., Qin X., Gevers D., Petrosino JF, Huttenhower C., Littman DR, and Ivanov II Cell host & microbe, 2011/09/15, Volume 10, Issue 3, p.260-72, (2011) Read More / View Supplemental Materials
Abstract
Metagenomic biomarker discovery and explanation.Segata, N., Izard J., Waldron L., Gevers D., Miropolsky L., Garrett WS, and Huttenhower C. Genome biology, 2011/06/24, Volume 12, Issue 6, p.R60, (2011) Read More / View Supplemental Materials
Abstract
  • Showing 1-11 of 11 Results