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  • Showing 1-13 of 13 Results
2016
Mobile genes in the human microbiome are structured from global to individual scales.Brito, IL, Yilmaz S., Huang K., Xu L., Jupiter SD, Jenkins AP, Naisilisili W., Tamminen M., Smillie CS, Wortman JR, Birren BW, Xavier RJ, Blainey PC, Singh AK, Gevers D., and Alm EJ Nature, 2016/07/13, (2016) Read More / View Supplemental Materials
Abstract
Genomic insights into the Ixodes scapularis tick vector of Lyme disease.Gulia-Nuss, M., Nuss AB, Meyer JM, Sonenshine DE, Roe RM, Waterhouse RM, Sattelle DB, de la Fuente J., Ribeiro JM, Megy K., Thimmapuram J., Miller JR, Walenz BP, Koren S., Hostetler JB, Thiagarajan M., Joardar VS, Hannick LI, Bidwell S., Hammond MP, et al. Nature communications, 2016/02/09, Volume 7, p.10507, (2016) Read More / View Supplemental Materials
Abstract
2013
The Aspergillus genome database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations.Cerqueira, GC, Arnaud MB, Inglis DO, Skrzypek MS, Binkley G., Simison M., Miyasato SR, Binkley J., Orvis J., Shah P., Wymore F., Sherlock G., and Wortman JR Nucleic acids research, 2013/11/04, (2013) Read More / View Supplemental Materials
Abstract
Kinannote, a computer program to identify and classify members of the eukaryotic protein kinase superfamily.Goldberg, JM, Griggs AD, Smith JL, Haas BJ, Wortman JR, and Zeng Q. Bioinformatics (Oxford, England), 2013/08/13, (2013) Read More / View Supplemental Materials
Abstract
Genomics of Loa loa, a Wolbachia-free filarial parasite of humans.Desjardins, CA, Cerqueira GC, Goldberg JM, Dunning Hotopp JC, Haas BJ, Zucker J., Ribeiro JM, Saif S., Levin JZ, Fan L., Zeng Q., Russ C., Wortman JR, Fink DL, Birren BW, and Nutman TB Nature genetics, 2013/05/01, Volume 45, Issue 5, p.495-500, (2013) Read More / View Supplemental Materials
Abstract
2012
Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.Grad, YH, Lipsitch M., Feldgarden M., Arachchi HM, Cerqueira GC, FitzGerald M., Godfrey P., Haas BJ, Murphy CI, Russ C., Sykes S., Walker BJ, Wortman JR, Young S., Zeng Q., Abouelleil A., Bochicchio J., Chauvin S., Desmet T., Gujja S., et al. Proceedings of the National Academy of Sciences of the United States of America, 2012/02/21, Volume 109, Issue 8, p.3065-70, (2012) Read More / View Supplemental Materials
Abstract
2011
Approaches to Fungal Genome Annotation.Haas, BJ, Zeng Q., Pearson MD, Cuomo CA, and Wortman JR Mycology, 2011/10/03, Volume 2, Issue 3, p.118-141, (2011) Read More / View Supplemental Materials
Abstract
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.Yilmaz, P., Kottmann R., Field D., Knight R., Cole JR, Amaral-Zettler L., Gilbert JA, Karsch-Mizrachi I., Johnston A., Cochrane G., Vaughan R., Hunter C., Park J., Morrison N., Rocca-Serra P., Sterk P., Arumugam M., Bailey M., Baumgartner L., Birren BW, et al. Nature biotechnology, 2011/05/01, Volume 29, Issue 5, p.415-20, (2011) Read More / View Supplemental Materials
Abstract
2010
A catalog of reference genomes from the human microbiome.Human Microbiome Jumpstart Reference Strains, Consortium, Nelson KE, Weinstock GM, Highlander SK, Worley KC, Creasy HH, Wortman JR, Rusch DB, Mitreva M., Sodergren E., Chinwalla AT, Feldgarden M., Gevers D., Haas BJ, Madupu R., Ward DV, Birren BW, Gibbs RA, Methe B., Petrosino JF, et al. Science (New York, N.Y.), 2010/05/21, Volume 328, Issue 5981, p.994-9, (2010) Read More / View Supplemental Materials
Abstract
2009
Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives.Sharpton, TJ, Stajich JE, Rounsley SD, Gardner MJ, Wortman JR, Jordar VS, Maiti R., Kodira CD, Neafsey DE, Zeng Q., Hung CY, McMahan C., Muszewska A., Grynberg M., Mandel MA, Kellner EM, Barker BM, Galgiani JN, Orbach MJ, Kirkland TN, et al. Genome research, 2009/10/01, Volume 19, Issue 10, p.1722-31, (2009) Read More / View Supplemental Materials
Abstract
2007
Genome sequence of Aedes aegypti, a major arbovirus vector.Nene, V., Wortman JR, Lawson D., Haas B., Kodira C., Tu ZJ, Loftus B., Xi Z., Megy K., Grabherr M., Ren Q., Zdobnov EM, Lobo NF, Campbell KS, Brown SE, Bonaldo MF, Zhu J., Sinkins SP, Hogenkamp DG, Amedeo P., et al. Science (New York, N.Y.), 2007/06/22, Volume 316, Issue 5832, p.1718-23, (2007) Read More / View Supplemental Materials
Abstract
2005
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus.Nierman, WC, Pain A., Anderson MJ, Wortman JR, Kim HS, Arroyo J., Berriman M., Abe K., Archer DB, Bermejo C., Bennett J., Bowyer P., Chen D., Collins M., Coulsen R., Davies R., Dyer PS, Farman M., Fedorova N., Fedorova N., et al. Nature, 2005/12/22, Volume 438, Issue 7071, p.1151-6, (2005) Read More / View Supplemental Materials
Abstract
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.Galagan, JE, Calvo SE, Cuomo C., Ma LJ, Wortman JR, Batzoglou S., Lee SI, Baştürkmen M., Spevak CC, Clutterbuck J., Kapitonov V., Jurka J., Scazzocchio C., Farman M., Butler J., Purcell S., Harris S., Braus GH, Draht O., Busch S., et al. Nature, 2005/12/22, Volume 438, Issue 7071, p.1105-15, (2005) Read More / View Supplemental Materials
Abstract
  • Showing 1-13 of 13 Results