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2013
Transcriptional and Epigenetic Dynamics during Specification of Human Embryonic Stem Cells.Gifford, CA, Ziller MJ, Gu H., Trapnell C., Donaghey J., Tsankov A., Shalek AK, Kelley DR, Shishkin AA, Issner R., Zhang X., Coyne M., Fostel JL, Holmes L., Meldrim J., Guttman M., Epstein C., Park H., Kohlbacher O., Rinn J., et al. Cell, 2013/05/07, (2013) Read More / View Supplemental Materials
Abstract
2012
Differential analysis of gene regulation at transcript resolution with RNA-seq.Trapnell, C., Hendrickson DG, Sauvageau M., Goff L., Rinn JL, and Pachter L. Nature biotechnology, 2012/12/09, Volume 31, Issue 1, p.46-53, (2012) Read More / View Supplemental Materials
Abstract
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks.Trapnell, C., Roberts A., Goff L., Pertea G., Kim D., Kelley DR, Pimentel H., Salzberg SL, Rinn JL, and Pachter L. Nature protocols, 2012/03/01, Volume 7, Issue 3, p.562-78, (2012) Read More / View Supplemental Materials
Abstract
2011
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses.Cabili, MN, Trapnell C., Goff L., Koziol M., Tazon-Vega B., Regev A., and Rinn JL Genes & development, 2011/09/15, Volume 25, Issue 18, p.1915-27, (2011) Read More / View Supplemental Materials
Abstract
Computational methods for transcriptome annotation and quantification using RNA-seq.Garber, M., Grabherr MG, Guttman M., and Trapnell C. Nature methods, 2011/06/01, Volume 8, Issue 6, p.469-77, (2011) Read More / View Supplemental Materials
Abstract
  • Showing 1-5 of 5 Results