>>> res = yeast.novelhits_whichreal([anno46,anno45,anno127],novels,hitdic,g) Grouping orf info Grouping hits by name ...done ########################## YAL067C (1782bp = 594AA) (tdist=7.2k) has 28 hits (SEO1) putative permease Spar (test2) non-orthologous hit at 55% f414/945 (43.8%) over 983bp for offset 1 Spar (test3) Longest island has f80 at 62% over 137bp Spar (test2) non-orthologous hit at 59% f610/845 (72.2%) over 880bp for offset 0 Spar (test3) Longest island has f80 at 61% over 416bp Spar (test2) non-orthologous hit at 53% f197/433 (45.5%) over 451bp for offset 0 Spar (test3) Longest island has f84 at 60% over 80bp Spar (test2) non-orthologous hit at 57% f137/342 (40.1%) over 364bp for offset 2 Spar (test3) Longest island has f81 at 65% over 69bp Smik (test2) non-orthologous hit at 84% f1776/1781 (99.7%) over 1782bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1737/1771 (98.1%) over 1782bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____| 80f 62% 137b77f 55% 56b100f 62% 63b69f 82f 55% 66bp Sp88full |..|======>....|==>.......|==>........|xxx|oo>....> | 80f 61% 416bp 100f100f 66% 90bp Sp6brk |====================>...|==>|====>.........> | 76f 584f 667f 579f 5100f 41% 34bp Sp478full |==>.|===>|=>..|oo>.|o> | 75f 63%83100f81f 65% 69bp Sp375brk |..|o>....|>|x>.|xx> | YAL067C: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YAL067C - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 0/1 (0.0%). Conflicting: 0/1 (0.0%). NoInfo: 0/1 (0.0%). Certain keep: 1/1 (100.0%) ########################## YAL063C (3969bp = 1323AA) (tdist=24.0k) has 468 hits (FLO9) putative Flo1p homolog Spar (test2) orthologous hit at 78% f2257/2273 (99.3%) over 2276bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 64% f2690/3345 (80.4%) over 3438bp for offset 1 Smik (test3) Longest island has f98 at 74% over 1926bp <== THIS IS REAL Sbay (test2) orthologous hit at 61% f1790/2388 (75.0%) over 2471bp for offset 0 Sbay (test3) Longest island has f90 at 71% over 1180bp Sbay (test2) orthologous hit at 69% f169/176 (96.0%) over 178bp for offset 0 Sbay (test3) Longest island has f100 at 69% over 169bp 0 102030040506070080901k1k 1k1k1k 1k1k1k1k 1k2k2k2k 2k2k2k2k 2k2k2k 3k3k3k3k 3k3k3k3k 3k3k3k |_|_|_|__|_|_|_|__|_|_|_|__|_|_|__|_|_|_|__|_|_|_|__|_|_|_|__|_|_|__|_|_|_|__|_|_|_|__|_|_| 98f 74% 1926bp Sm1236ful |==========================================>.................................> | 90f 71% 1180bp Sb942brk |=========================>.............................> | 100f 69% 169bp Sb942brk ||oo> | YAL063C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YAL063C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 0/2 (0.0%). Conflicting: 0/2 (0.0%). NoInfo: 0/2 (0.0%). Certain keep: 2/2 (100.0%) ########################## YAL062W (1374bp = 458AA) (tdist=31.5k) has 7 hits (GDH3) NADP-linked glutamate d..ydrogenase (92) Spar (test2) orthologous hit at 90% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1371/1373 (99.9%) over 1374bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1371/1373 (99.9%) over 1374bp for offset 0 <== THIS IS REAL YAL062W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL062W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/3 (0.0%). Conflicting: 0/3 (0.0%). NoInfo: 0/3 (0.0%). Certain keep: 3/3 (100.0%) ########################## YAL060W (1149bp = 383AA) (tdist=35.1k) has 15 hits (BDH1) (2R,3R)-2,3-butanediol..ydrogenase (94) Spar (test2) orthologous hit at 91% f1149/1149 (100.0%) over 1149bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1149/1149 (100.0%) over 1149bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1138/1147 (99.2%) over 1149bp for offset 0 <== THIS IS REAL YAL060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/4 (0.0%). Conflicting: 0/4 (0.0%). NoInfo: 0/4 (0.0%). Certain keep: 4/4 (100.0%) ########################## YAL059W (639bp = 213AA) (tdist=36.5k) has 8 hits (ECM1) putative transmembrane d..biogenesis (126) Spar (test2) orthologous hit at 87% f574/638 (90.0%) over 639bp for offset 0 Spar (test3) Longest island has f100 at 90% over 571bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f538/591 (91.0%) over 593bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f513/597 (85.9%) over 604bp for offset 2 Sbay (test3) Longest island has f98 at 80% over 479bp <== THIS IS REAL 0 100 200 300 400 500 600 639 |_____________|_____________|_____________|_____________|_____________|_____________|_____| 100f 90% 571bp Sp219full |.........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 98f 80% 479bp Sb942full |........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.......> | YAL059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/5 (0.0%). Conflicting: 0/5 (0.0%). NoInfo: 0/5 (0.0%). Certain keep: 5/5 (100.0%) ########################## YAL058W (1509bp = 503AA) (tdist=37.4k) has 3 hits (CNE1) Calnexin and calreticulin homolog Flanking ORFs are: YAL060W and YAL058W. YAL058W skipped ########################## YAL058C-A (351bp = 117AA) (tdist=38.6k) has 4 hits (KRE20) Hypothetical ORF Flanking ORFs are: YAL060W and YAL058W. YAL058C-A skipped ########################## YAL056W (2544bp = 848AA) (tdist=39.2k) has 20 hits (KRH1) Hypothetical ORF Spar (test2) orthologous hit at 89% f1489/1493 (99.7%) over 1494bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2379/2463 (96.6%) over 2481bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f825/868 (95.0%) over 872bp for offset 0 <== THIS IS REAL YAL056W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL056W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/6 (0.0%). Conflicting: 0/6 (0.0%). NoInfo: 0/6 (0.0%). Certain keep: 6/6 (100.0%) ########################## YAL055W (543bp = 181AA) (tdist=42.1k) has 7 hits (PEX22) Product of gene unknown Spar (test2) orthologous hit at 84% f543/543 (100.0%) over 543bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f534/542 (98.5%) over 543bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f525/535 (98.1%) over 543bp for offset 0 <== THIS IS REAL YAL055W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL055W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/7 (0.0%). Conflicting: 0/7 (0.0%). NoInfo: 0/7 (0.0%). Certain keep: 7/7 (100.0%) ########################## YAL054C (2142bp = 714AA) (tdist=42.8k) has 7 hits (ACS1) inducible acetyl-coenzy..synthetase (95) Spar (test2) orthologous hit at 92% f2142/2142 (100.0%) over 2142bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2142/2142 (100.0%) over 2142bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2139/2139 (100.0%) over 2142bp for offset 0 <== THIS IS REAL YAL054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/8 (0.0%). Conflicting: 0/8 (0.0%). NoInfo: 0/8 (0.0%). Certain keep: 8/8 (100.0%) ########################## YAL051W (3189bp = 1063AA) (tdist=48.5k) has 20 hits (OAF1) transcription factor Spar (test2) orthologous hit at 89% f3122/3182 (98.1%) over 3189bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3084/3176 (97.1%) over 3189bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3087/3175 (97.2%) over 3189bp for offset 0 <== THIS IS REAL YAL051W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL051W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/9 (0.0%). Conflicting: 0/9 (0.0%). NoInfo: 0/9 (0.0%). Certain keep: 9/9 (100.0%) ########################## YAL047C (1869bp = 623AA) has 45 hits (SPC72) component of spindle pole bodies Spar (test2) orthologous hit at 88% f1862/1867 (99.7%) over 1869bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1798/1814 (99.1%) over 1815bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 60% f1088/1542 (70.6%) over 1591bp for offset 0 Sbay (test3) Longest island has f97 at 74% over 639bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|____|___|____|____|____|____|___|____|____|____|____|____|___|____|___| 97f 74% 639bp Sb942full |=============================>.............................................> | YAL047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/10 (0.0%). Conflicting: 0/10 (0.0%). NoInfo: 0/10 (0.0%). Certain keep: 10/10 (100.0%) ########################## YAL044C (534bp = 178AA) has 4 hits (GCV3) H-protein subunit of the glycine cleavage system Spar (test2) orthologous hit at 92% f528/534 (98.9%) over 534bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 89% f525/533 (98.5%) over 534bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f519/528 (98.3%) over 531bp for offset 0 <== THIS IS REAL YAL044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/11 (0.0%). Conflicting: 0/11 (0.0%). NoInfo: 0/11 (0.0%). Certain keep: 11/11 (100.0%) ########################## YAL043C (2358bp = 786AA) has 16 hits (PTA1) pre-tRNA processing Spar (test2) orthologous hit at 90% f2358/2358 (100.0%) over 2358bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2353/2357 (99.8%) over 2358bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1196/1303 (91.8%) over 1318bp for offset 0 <== THIS IS REAL YAL043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/12 (0.0%). Conflicting: 0/12 (0.0%). NoInfo: 0/12 (0.0%). Certain keep: 12/12 (100.0%) ########################## YAL043C-A (378bp = 126AA) has 4 hits (KRE23) Hypothetical ORF Flanking ORFs are: YAL044C and YAL043C-A. YAL043C-A skipped ########################## YAL042W (1248bp = 416AA) has 6 hits (ERV46) ER vesicle protein of 46 kDa Flanking ORFs are: YAL044C and YAL043C-A. YAL042W skipped ########################## YAL041W (2565bp = 855AA) has 24 hits (CDC24) Guanine nucleotide exchange factor .. for cdc42 (117) Spar (test2) orthologous hit at 90% f2565/2565 (100.0%) over 2565bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2557/2563 (99.8%) over 2565bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2297/2309 (99.5%) over 2323bp for offset 0 <== THIS IS REAL YAL041W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL041W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/13 (0.0%). Conflicting: 0/13 (0.0%). NoInfo: 0/13 (0.0%). Certain keep: 13/13 (100.0%) ########################## YAL040C (1743bp = 581AA) has 13 hits (CLN3) G(sub)1 cyclin Spar (test2) orthologous hit at 93% f1740/1740 (100.0%) over 1743bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1664/1676 (99.3%) over 1680bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1679/1727 (97.2%) over 1739bp for offset 0 <== THIS IS REAL YAL040C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL040C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/14 (0.0%). Conflicting: 0/14 (0.0%). NoInfo: 0/14 (0.0%). Certain keep: 14/14 (100.0%) ########################## YAL039C (810bp = 270AA) has 5 hits (CYC3) cytochrome c heme lyase (CCHL) Spar (test2) orthologous hit at 92% f808/810 (99.8%) over 810bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f802/804 (99.8%) over 810bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f712/748 (95.2%) over 752bp for offset 0 <== THIS IS REAL YAL039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/15 (0.0%). Conflicting: 0/15 (0.0%). NoInfo: 0/15 (0.0%). Certain keep: 15/15 (100.0%) ########################## YAL038W (1503bp = 501AA) has 10 hits (CDC19) Pyruvate kinase Spar (test2) orthologous hit at 98% f1503/1503 (100.0%) over 1503bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 97% f1503/1503 (100.0%) over 1503bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f1503/1503 (100.0%) over 1503bp for offset 0 <== THIS IS REAL YAL038W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL038W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/16 (0.0%). Conflicting: 0/16 (0.0%). NoInfo: 0/16 (0.0%). Certain keep: 16/16 (100.0%) ########################## YAL036C (1110bp = 370AA) has 8 hits (FUN11) similar to Xenopus GTP-binding protein DRG Spar (test2) orthologous hit at 92% f1110/1110 (100.0%) over 1110bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1110/1110 (100.0%) over 1110bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1110/1110 (100.0%) over 1110bp for offset 0 <== THIS IS REAL YAL036C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL036C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/17 (0.0%). Conflicting: 0/17 (0.0%). NoInfo: 0/17 (0.0%). Certain keep: 17/17 (100.0%) ########################## YAL035W (3009bp = 1003AA) has 835 hits (FUN12) 97 kDa protein Spar (test2) orthologous hit at 91% f1914/1949 (98.2%) over 1955bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f2447/2835 (86.3%) over 2881bp for offset 1 Smik (test3) Longest island has f100 at 89% over 1854bp <== THIS IS REAL Sbay (test2) orthologous hit at 74% f2438/2949 (82.7%) over 3007bp for offset 0 Sbay (test3) Longest island has f100 at 88% over 1855bp <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 2k 33k |_|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|| 84f 57%100f 89% 1854bp Sm1291ful |........................|oooooo|oooooooooooooooooooooooooooooooooooooooooooooooooooooo|> 100f 88% 1855bp Sb942full |...................................|=====================================================|> YAL035W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL035W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/18 (0.0%). Conflicting: 0/18 (0.0%). NoInfo: 0/18 (0.0%). Certain keep: 18/18 (100.0%) ########################## YAL034W-A (870bp = 290AA) has 17 hits (MTW1) Product of gene unknown Flanking ORFs are: YAL036C and YAL035C-A. YAL034W-A skipped ########################## YAL034C (1392bp = 464AA) has 15 hits (FUN19) Function unknown now Spar (test2) orthologous hit at 91% f767/773 (99.2%) over 774bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f637/881 (72.3%) over 891bp for offset 2 Smik (test3) Longest island has f97 at 83% over 591bp <== THIS IS REAL Sbay (test2) orthologous hit at 83% f650/650 (100.0%) over 650bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|_____|______|_____|______|_____|______|_____|______|_____|______|_____|______|_____| 97f 83% 591bp Sm1291ful |........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.........> | YAL034C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL034C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/19 (0.0%). Conflicting: 0/19 (0.0%). NoInfo: 0/19 (0.0%). Certain keep: 19/19 (100.0%) ########################## YAL033W (522bp = 174AA) has 5 hits (POP5) An integral subunit of RNase P and app.. RNase MRP (106) Spar (test2) orthologous hit at 91% f515/520 (99.0%) over 521bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 83% f519/522 (99.4%) over 522bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f497/502 (99.0%) over 506bp for offset 0 <== THIS IS REAL YAL033W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL033W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/20 (0.0%). Conflicting: 0/20 (0.0%). NoInfo: 0/20 (0.0%). Certain keep: 20/20 (100.0%) ########################## YAL032C (1140bp = 380AA) has 5 hits (PRP45) pre-mRNA splicing factor Spar (test2) orthologous hit at 89% f1136/1137 (99.9%) over 1140bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1126/1134 (99.3%) over 1140bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1131/1137 (99.5%) over 1140bp for offset 0 <== THIS IS REAL YAL032C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL032C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/21 (0.0%). Conflicting: 0/21 (0.0%). NoInfo: 0/21 (0.0%). Certain keep: 21/21 (100.0%) ########################## YAL031C (2283bp = 761AA) has 7 hits (FUN21) FUN21 Spar (test2) orthologous hit at 88% f2283/2283 (100.0%) over 2283bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2267/2279 (99.5%) over 2283bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2259/2278 (99.2%) over 2282bp for offset 0 <== THIS IS REAL YAL031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/22 (0.0%). Conflicting: 0/22 (0.0%). NoInfo: 0/22 (0.0%). Certain keep: 22/22 (100.0%) ########################## YAL029C (4416bp = 1472AA) has 41 hits (MYO4) myosin Spar (test2) orthologous hit at 89% f4416/4416 (100.0%) over 4416bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f4379/4411 (99.3%) over 4416bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1196/2136 (56.0%) over 2139bp for offset 0 Sbay (test3) Longest island has f99 at 82% over 1213bp <== THIS IS REAL 0 1020304050607080901k1k1k1k1k1k1k1k1k1k2k2k2k2k2k2k2k 2k2k2k3k3k3k3k3k3k3k3k3k3k4k4k4k4k44k |_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|| 99f 80% 881bp 99f 82% 1213bp Sb957brk |================>.|xxxxxxxxxxxxxxxxxxxxxxx> | YAL029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/23 (0.0%). Conflicting: 0/23 (0.0%). NoInfo: 0/23 (0.0%). Certain keep: 23/23 (100.0%) ########################## YAL026C (4068bp = 1356AA) has 52 hits (DRS2) Membrane-spanning Ca-ATPase (P-type..2) ATPases (128) Spar (test2) orthologous hit at 91% f3927/4064 (96.6%) over 4068bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2835/2851 (99.4%) over 2854bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f3947/4062 (97.2%) over 4068bp for offset 0 <== THIS IS REAL YAL026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/24 (0.0%). Conflicting: 0/24 (0.0%). NoInfo: 0/24 (0.0%). Certain keep: 24/24 (100.0%) ########################## YAL025C (921bp = 307AA) has 160 hits (MAK16) putative nuclear protein Spar (test2) orthologous hit at 92% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f919/921 (99.8%) over 921bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f824/887 (92.9%) over 896bp for offset 1 <== THIS IS REAL YAL025C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL025C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/25 (0.0%). Conflicting: 0/25 (0.0%). NoInfo: 0/25 (0.0%). Certain keep: 25/25 (100.0%) ########################## YAL024C (4308bp = 1436AA) has 33 hits (LTE1) putative GTP-exchange protein Spar (test2) orthologous hit at 88% f2177/2229 (97.7%) over 2231bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2276/2384 (95.5%) over 2400bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f3429/3586 (95.6%) over 3605bp for offset 0 <== THIS IS REAL YAL024C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL024C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/26 (0.0%). Conflicting: 0/26 (0.0%). NoInfo: 0/26 (0.0%). Certain keep: 26/26 (100.0%) ########################## YAL023C (2277bp = 759AA) has 26 hits (PMT2) dolichyl phosphate-D-mannose:protein..ransferase (104) Spar (test2) orthologous hit at 93% f2269/2277 (99.6%) over 2277bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2269/2277 (99.6%) over 2277bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2245/2274 (98.7%) over 2277bp for offset 0 <== THIS IS REAL YAL023C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL023C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/27 (0.0%). Conflicting: 0/27 (0.0%). NoInfo: 0/27 (0.0%). Certain keep: 27/27 (100.0%) ########################## YAL022C (1554bp = 518AA) has 5 hits (FUN26) predicted membrane protein Spar (test2) orthologous hit at 89% f1554/1554 (100.0%) over 1554bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1546/1552 (99.6%) over 1553bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1408/1517 (92.8%) over 1538bp for offset 0 <== THIS IS REAL YAL022C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL022C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/28 (0.0%). Conflicting: 0/28 (0.0%). NoInfo: 0/28 (0.0%). Certain keep: 28/28 (100.0%) ########################## YAL021C (2514bp = 838AA) has 440 hits (CCR4) 95 kDa containng leucine rich tandem repeats Spar (test2) orthologous hit at 88% f2317/2451 (94.5%) over 2463bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2457/2465 (99.7%) over 2475bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1932/1938 (99.7%) over 1940bp for offset 0 <== THIS IS REAL YAL021C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL021C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/29 (0.0%). Conflicting: 0/29 (0.0%). NoInfo: 0/29 (0.0%). Certain keep: 29/29 (100.0%) ########################## YAL020C (1002bp = 334AA) has 3 hits (ATS1) similarity to human RCC1 protein Spar (test2) orthologous hit at 85% f992/1001 (99.1%) over 1002bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f973/996 (97.7%) over 1002bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f952/986 (96.6%) over 998bp for offset 0 <== THIS IS REAL YAL020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/30 (0.0%). Conflicting: 0/30 (0.0%). NoInfo: 0/30 (0.0%). Certain keep: 30/30 (100.0%) ########################## YAL019W (3396bp = 1132AA) has 577 hits (FUN30) SNF2 protein family Spar (test2) orthologous hit at 89% f2115/2151 (98.3%) over 2159bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2136/2163 (98.8%) over 2173bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2077/2161 (96.1%) over 2178bp for offset 0 <== THIS IS REAL YAL019W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL019W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/31 (0.0%). Conflicting: 0/31 (0.0%). NoInfo: 0/31 (0.0%). Certain keep: 31/31 (100.0%) ########################## YAL017W (4071bp = 1357AA) has 44 hits (FUN31) Serine/threonine kinase Spar (test2) orthologous hit at 90% f3476/4071 (85.4%) over 4071bp for offset 1 Spar (test3) Longest island has f100 at 90% over 3476bp <== THIS IS REAL Smik (test2) orthologous hit at 85% f4036/4065 (99.3%) over 4069bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2983/3159 (94.4%) over 3175bp for offset 2 <== THIS IS REAL 0 102030400506070809001k1k1k1k1k 1k1k1k1k 1k2k2k2k2k 2k2k2k2k2k 2k3k3k3k3k 3k3k3k3k 3k3k4k4k |_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_| 100f 90% 3476bp 100f 91% 595bpSp219full |===========================================================================|ooooooooooooo| YAL017W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL017W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/32 (0.0%). Conflicting: 0/32 (0.0%). NoInfo: 0/32 (0.0%). Certain keep: 32/32 (100.0%) ########################## YAL016W (1908bp = 636AA) has 17 hits (TPD3) protein phosphatase 2A regulatory subunit A Spar (test2) orthologous hit at 91% f1884/1894 (99.5%) over 1898bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1856/1856 (100.0%) over 1856bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1856/1856 (100.0%) over 1856bp for offset 0 <== THIS IS REAL YAL016W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL016W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/33 (0.0%). Conflicting: 0/33 (0.0%). NoInfo: 0/33 (0.0%). Certain keep: 33/33 (100.0%) ########################## YAL015C (1200bp = 400AA) has 6 hits (NTG1) DNA glycosylase Spar (test2) orthologous hit at 90% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1185/1196 (99.1%) over 1199bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1104/1154 (95.7%) over 1163bp for offset 1 <== THIS IS REAL YAL015C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL015C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/34 (0.0%). Conflicting: 0/34 (0.0%). NoInfo: 0/34 (0.0%). Certain keep: 34/34 (100.0%) ########################## YAL014C (618bp = 206AA) has 11 hits (UIP2) YAL014C Spar (test2) orthologous hit at 87% f446/464 (96.1%) over 469bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f557/608 (91.6%) over 618bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f359/368 (97.6%) over 369bp for offset 1 <== THIS IS REAL YAL014C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL014C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/35 (0.0%). Conflicting: 0/35 (0.0%). NoInfo: 0/35 (0.0%). Certain keep: 35/35 (100.0%) ########################## YAL013W (1089bp = 363AA) has 66 hits (DEP1) regulation of phospholipid metabolism Spar (test2) orthologous hit at 91% f967/1088 (88.9%) over 1089bp for offset 1 Spar (test3) Longest island has f100 at 91% over 967bp <== THIS IS REAL Smik (test2) orthologous hit at 78% f746/1059 (70.4%) over 1082bp for offset 1 Smik (test3) Longest island has f97 at 87% over 672bp <== THIS IS REAL Sbay (test2) orthologous hit at 70% f723/1057 (68.4%) over 1089bp for offset 2 Sbay (test3) Longest island has f100 at 85% over 466bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|________|_______|_______|_______|________|_______|_______|_______| 100f 91% 967bp Sp218full |===============================================================================>.........| 97f 87% 672bp Sm1032ful |.........................|oooooooooooooooooooooooooooooooooooooooooooooooooooooo>........| 100f 85% 466bp Sb957full |..........................................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.......| YAL013W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL013W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/36 (0.0%). Conflicting: 0/36 (0.0%). NoInfo: 0/36 (0.0%). Certain keep: 36/36 (100.0%) ########################## YAL012W (1185bp = 395AA) has 12 hits (CYS3) cystathionine gamma-lyase Spar (test2) orthologous hit at 94% f1185/1185 (100.0%) over 1185bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1184/1184 (100.0%) over 1184bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1184/1184 (100.0%) over 1184bp for offset 0 <== THIS IS REAL YAL012W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL012W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/37 (0.0%). Conflicting: 0/37 (0.0%). NoInfo: 0/37 (0.0%). Certain keep: 37/37 (100.0%) ########################## YAL010C (1482bp = 494AA) has 10 hits (MDM10) Mitochondrial outer membrane protei..nheritance (134) Spar (test2) orthologous hit at 89% f1482/1482 (100.0%) over 1482bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1472/1478 (99.6%) over 1482bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1416/1470 (96.3%) over 1482bp for offset 0 <== THIS IS REAL YAL010C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL010C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/38 (0.0%). Conflicting: 0/38 (0.0%). NoInfo: 0/38 (0.0%). Certain keep: 38/38 (100.0%) ########################## YAL009W (780bp = 260AA) has 8 hits (SPO7) sporulation protein Spar (test2) orthologous hit at 92% f780/780 (100.0%) over 780bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f780/780 (100.0%) over 780bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f780/780 (100.0%) over 780bp for offset 0 <== THIS IS REAL YAL009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/39 (0.0%). Conflicting: 0/39 (0.0%). NoInfo: 0/39 (0.0%). Certain keep: 39/39 (100.0%) ########################## YAL008W (597bp = 199AA) has 8 hits (FUN14) Product of gene unknown Spar (test2) orthologous hit at 90% f363/363 (100.0%) over 363bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f359/362 (99.2%) over 363bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f356/356 (100.0%) over 356bp for offset 0 <== THIS IS REAL YAL008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/40 (0.0%). Conflicting: 0/40 (0.0%). NoInfo: 0/40 (0.0%). Certain keep: 40/40 (100.0%) ########################## YAL007C (648bp = 216AA) has 21 hits (ERP2) p24 protein involved in membrane trafficking Spar (test2) orthologous hit at 92% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f644/647 (99.5%) over 648bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL YAL007C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL007C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/41 (0.0%). Conflicting: 0/41 (0.0%). NoInfo: 0/41 (0.0%). Certain keep: 41/41 (100.0%) ########################## YAL005C (1929bp = 643AA) has 71 hits (SSA1) Heat shock protein of HSP70 family, ..ytoplasmic (91) Flanking ORFs are: YAL008W and YAL005C. YAL005C skipped ########################## YAL002W (3531bp = 1177AA) has 9 hits (VPS8) Vps8p is a membrane-associated hydro..ing motif. (214) Spar (test2) orthologous hit at 89% f3515/3529 (99.6%) over 3531bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3514/3527 (99.6%) over 3530bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3466/3518 (98.5%) over 3530bp for offset 0 <== THIS IS REAL YAL002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAL002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/42 (0.0%). Conflicting: 0/42 (0.0%). NoInfo: 0/42 (0.0%). Certain keep: 42/42 (100.0%) ########################## YAR002W (1620bp = 540AA) has 10 hits (NUP60) nuclear pore protein Spar (test2) orthologous hit at 86% f1616/1617 (99.9%) over 1620bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1593/1613 (98.8%) over 1620bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f637/660 (96.5%) over 669bp for offset 0 <== THIS IS REAL YAR002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/43 (0.0%). Conflicting: 0/43 (0.0%). NoInfo: 0/43 (0.0%). Certain keep: 43/43 (100.0%) ########################## YAR002C-A (660bp = 220AA) has 8 hits (ERP1) p24 protein involved in membrane trafficking Spar (test2) orthologous hit at 92% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f648/658 (98.5%) over 660bp for offset 0 <== THIS IS REAL YAR002C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR002C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/44 (0.0%). Conflicting: 0/44 (0.0%). NoInfo: 0/44 (0.0%). Certain keep: 44/44 (100.0%) ########################## YAR003W (1281bp = 427AA) has 17 hits (SWD1) Spar (test2) orthologous hit at 92% f1281/1281 (100.0%) over 1281bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1275/1278 (99.8%) over 1279bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1276/1278 (99.8%) over 1279bp for offset 0 <== THIS IS REAL YAR003W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR003W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/45 (0.0%). Conflicting: 0/45 (0.0%). NoInfo: 0/45 (0.0%). Certain keep: 45/45 (100.0%) ########################## YAR007C (1866bp = 622AA) has 10 hits (RFA1) 69 kDa subunit of the heterotrimeric..1 and CAR1 (148) Spar (test2) orthologous hit at 92% f1865/1865 (100.0%) over 1865bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1866/1866 (100.0%) over 1866bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1866/1866 (100.0%) over 1866bp for offset 0 <== THIS IS REAL YAR007C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR007C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/46 (0.0%). Conflicting: 0/46 (0.0%). NoInfo: 0/46 (0.0%). Certain keep: 46/46 (100.0%) ########################## YAR008W (828bp = 276AA) has 9 hits (SEN34) 34kDa subunit of the tetrameric tRNA ..donuclease (101) Spar (test2) orthologous hit at 91% f817/822 (99.4%) over 828bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f823/827 (99.5%) over 828bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f794/821 (96.7%) over 828bp for offset 0 <== THIS IS REAL YAR008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/47 (0.0%). Conflicting: 0/47 (0.0%). NoInfo: 0/47 (0.0%). Certain keep: 47/47 (100.0%) ########################## YAR014C (2109bp = 703AA) has 24 hits (BUD14) Spar (test2) orthologous hit at 89% f1447/1516 (95.4%) over 1517bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1439/1515 (95.0%) over 1517bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f941/1072 (87.8%) over 1102bp for offset 0 Sbay (test3) Longest island has f93 at 76% over 918bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 22k |___|___|___|____|___|___|___|____|___|___|___|____|___|___|____|___|___|___|____|___|___|| 93f 76% 918bp Sb957full |........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | YAR014C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR014C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/48 (0.0%). Conflicting: 0/48 (0.0%). NoInfo: 0/48 (0.0%). Certain keep: 48/48 (100.0%) ########################## YAR015W (921bp = 307AA) has 6 hits (ADE1) phosphoribosyl amino imidazolesuccinoc..synthetase (101) Spar (test2) orthologous hit at 94% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL YAR015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/49 (0.0%). Conflicting: 0/49 (0.0%). NoInfo: 0/49 (0.0%). Certain keep: 49/49 (100.0%) ########################## YAR018C (1308bp = 436AA) has 26 hits (KIN3) protein kinase Spar (test2) orthologous hit at 93% f1308/1308 (100.0%) over 1308bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1308/1308 (100.0%) over 1308bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1302/1307 (99.6%) over 1308bp for offset 0 <== THIS IS REAL YAR018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/50 (0.0%). Conflicting: 0/50 (0.0%). NoInfo: 0/50 (0.0%). Certain keep: 50/50 (100.0%) ########################## YAR019C (2925bp = 975AA) has 41 hits (CDC15) protein kinase domain Spar (test2) orthologous hit at 89% f2899/2922 (99.2%) over 2925bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2887/2919 (98.9%) over 2925bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f521/552 (94.4%) over 556bp for offset 0 <== THIS IS REAL YAR019C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR019C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/51 (0.0%). Conflicting: 0/51 (0.0%). NoInfo: 0/51 (0.0%). Certain keep: 51/51 (100.0%) ########################## YAR020C (168bp = 56AA) has 108 hits (PAU7) similar to Pau3, member of Pau1 family Spar (test2) orthologous hit at 86% f159/162 (98.1%) over 168bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f160/162 (98.8%) over 168bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 85% f166/168 (98.8%) over 168bp for offset 0 <== THIS IS REAL YAR020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/52 (0.0%). Conflicting: 0/52 (0.0%). NoInfo: 0/52 (0.0%). Certain keep: 52/52 (100.0%) ########################## YAR027W (708bp = 236AA) (tdist=45.7k) has 49 hits (UIP3) YAR027W Spar (test2) orthologous hit at 60% f373/507 (73.6%) over 518bp for offset 2 Spar (test3) Longest island has f92 at 67% over 205bp Smik (test2) non-orthologous hit at 75% f413/682 (60.6%) over 689bp for offset 0 Smik (test3) Longest island has f97 at 78% over 329bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 63% f296/673 (44.0%) over 692bp for offset 1 Sbay (test3) Longest island has f80 at 59% over 167bp Sbay (test2) non-orthologous hit at 63% f566/650 (87.1%) over 665bp for offset 0 Sbay (test3) Longest island has f87 at 66% over 469bp Sbay (test2) non-orthologous hit at 60% f379/485 (78.1%) over 497bp for offset 0 Sbay (test3) Longest island has f96 at 65% over 239bp Sbay (test2) non-orthologous hit at 61% f186/409 (45.5%) over 431bp for offset 0 Sbay (test3) Longest island has f91 at 72% over 106bp 0 100 200 300 400 500 600 70708 |___________|____________|____________|___________|____________|____________|___________|_| 97f 58% 142bp 79f 48% 375f 5492f 67% 205bp Sp218full |...|xxxxxxxxxxxxxxxxx>|xxxx>...|oo>..|xxxxxxxxxxxxxxxxxxxxxxxxx>.> | 91f 74% 185bp 97f 70% 94bp 97f 78% 329bp Sm949full |======================|xxxxxxxxxxx>...........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | 80f 59% 167bp 88f 73% 162bp 91f 59% 110bp 96f 71% 110Sb579full |...|oooooooooooooooooooo>.............|ooooooooooooooooooo>|xxxxxxxxxxxxx>..|xxxxxxxxxx|xx> 87f 66% 469bp Sb957full |.........................|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooo|> 91f 58% 146bp 88f 56% 496f 65% 239bp Sb773full |xxxxxxxxxxxxxxxxxx>.....|ooooo>..|xxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | 87f 61% 69bp 91f 72% 106bp Sb98full |...|ooooooo>..........................|=============>.> | YAR027W: kill: - keep: Smik Not a single protein hit, and yet, certain keep YAR027W - Certain Keep. Kill and Keep Smik Current total: Certain kills: 0/53 (0.0%). Conflicting: 0/53 (0.0%). NoInfo: 0/53 (0.0%). Certain keep: 53/53 (100.0%) ########################## YAR031W (897bp = 299AA) (tdist=42.4k) has 38 hits (PRM9) Flanking ORFs are: YAR023C and YAR028W. YAR031W skipped ########################## YAR035W (2064bp = 688AA) (tdist=37.9k) has 10 hits (YAT1) Outer carnitine acetyl..ochondrial (106) Spar (test2) non-orthologous hit at 92% f1154/1163 (99.2%) over 1164bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f2046/2055 (99.6%) over 2058bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f1043/1108 (94.1%) over 1123bp for offset 1 <== THIS IS REAL YAR035W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR035W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/54 (0.0%). Conflicting: 0/54 (0.0%). NoInfo: 0/54 (0.0%). Certain keep: 54/54 (100.0%) ########################## YAR042W (771bp = 257AA) (tdist=36.8k) has 7 hits (SWH1) ankyrin repeat Spar (test2) orthologous hit at 91% f686/771 (89.0%) over 771bp for offset 1 Spar (test3) Longest island has f100 at 92% over 686bp <== THIS IS REAL Smik (test2) orthologous hit at 88% f674/767 (87.9%) over 771bp for offset 1 Smik (test3) Longest island has f98 at 88% over 687bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 85% f681/768 (88.7%) over 771bp for offset 1 Sbay (test3) Longest island has f99 at 85% over 686bp <== THIS IS REAL 0 100 200 300 400 500 600 700 771 |__________|___________|___________|__________|___________|___________|__________|________| 100f 92% 686bp Sp216full |===============================================================================>.........| 98f 88% 687bp Sm949full |===============================================================================>.........| 99f 85% 686bp Sb928full |===============================================================================>.........| YAR042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/55 (0.0%). Conflicting: 0/55 (0.0%). NoInfo: 0/55 (0.0%). Certain keep: 55/55 (100.0%) ########################## YAR044W (2580bp = 860AA) (tdist=34.0k) has 441 hits (OSH1) Shows homology to the..ein (OSBP) (119) Spar (test2) non-orthologous hit at 88% f2251/2271 (99.1%) over 2277bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f2140/2277 (94.0%) over 2295bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f1973/2010 (98.2%) over 2019bp for offset 0 <== THIS IS REAL YAR044W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR044W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/56 (0.0%). Conflicting: 0/56 (0.0%). NoInfo: 0/56 (0.0%). Certain keep: 56/56 (100.0%) ########################## YAR050W (4614bp = 1538AA) (tdist=22.2k) has 665 hits (FLO1) FLO1 putative cell w..ycoprotein (96) Spar (test2) non-orthologous hit at 76% f2251/2269 (99.2%) over 2273bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 68% f2170/2455 (88.4%) over 2495bp for offset 0 Smik (test3) Longest island has f99 at 73% over 1925bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 60% f1850/2494 (74.2%) over 2585bp for offset 2 Sbay (test3) Longest island has f90 at 69% over 1232bp <== THIS IS REAL 01020304050607080901k1k1k1k1k1k1k1k1k1k22k2k2k2k2k2k2k2k2k3k3k3k3k3k3k3k3k3k3k44k4k4k4k4k44k ||_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_||_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_||_|_|_|_|_|| 99f 73% 1925bp Sm1236brk |====================================>..........> | 90f 69% 1232bp Sb942brk |=======================>.........................> | YAR050W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR050W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/57 (0.0%). Conflicting: 0/57 (0.0%). NoInfo: 0/57 (0.0%). Certain keep: 57/57 (100.0%) ########################## YAR071W (1404bp = 468AA) (tdist=3.3k) has 19 hits (PHO11) Acid phosphatase, secreted Spar (test2) non-orthologous hit at 83% f1403/1403 (100.0%) over 1403bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f1398/1402 (99.7%) over 1403bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 89% f1396/1401 (99.6%) over 1403bp for offset 0 <== THIS IS REAL YAR071W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YAR071W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/58 (0.0%). Conflicting: 0/58 (0.0%). NoInfo: 0/58 (0.0%). Certain keep: 58/58 (100.0%) ########################## YAR073W (1212bp = 404AA) (tdist=1.2k) has 26 hits (IMD1) IMP dehydrogenase homolog Flanking ORFs are: YAR070C and YAR073W. YAR073W skipped ########################## YBL106C (3033bp = 1011AA) (tdist=10.8k) has 14 hits (SRO77) yeast homolog of the..ant larvae (128) Spar (test2) orthologous hit at 88% f3026/3031 (99.8%) over 3033bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3005/3025 (99.3%) over 3033bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2974/3025 (98.3%) over 3033bp for offset 0 <== THIS IS REAL YBL106C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL106C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/59 (0.0%). Conflicting: 0/59 (0.0%). NoInfo: 0/59 (0.0%). Certain keep: 59/59 (100.0%) ########################## YBL105C (3456bp = 1152AA) (tdist=14.2k) has 67 hits (PKC1) Protein Kinase C Spar (test2) orthologous hit at 90% f3456/3456 (100.0%) over 3456bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3444/3452 (99.8%) over 3456bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3417/3448 (99.1%) over 3456bp for offset 0 <== THIS IS REAL YBL105C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL105C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/60 (0.0%). Conflicting: 0/60 (0.0%). NoInfo: 0/60 (0.0%). Certain keep: 60/60 (100.0%) ########################## YBL103C (1461bp = 487AA) (tdist=22.0k) has 9 hits (RTG3) Probable cytochrome c s..er binding (102) Spar (test2) orthologous hit at 92% f1454/1454 (100.0%) over 1454bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1440/1457 (98.8%) over 1460bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1426/1447 (98.5%) over 1461bp for offset 0 <== THIS IS REAL YBL103C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL103C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/61 (0.0%). Conflicting: 0/61 (0.0%). NoInfo: 0/61 (0.0%). Certain keep: 61/61 (100.0%) ########################## YBL102W (648bp = 216AA) (tdist=24.0k) has 5 hits (SFT2) similar to mammalian syntaxin 5 Spar (test2) orthologous hit at 91% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f641/647 (99.1%) over 648bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f643/647 (99.4%) over 648bp for offset 0 <== THIS IS REAL YBL102W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL102W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/62 (0.0%). Conflicting: 0/62 (0.0%). NoInfo: 0/62 (0.0%). Certain keep: 62/62 (100.0%) ########################## YBL101C (3354bp = 1118AA) (tdist=24.9k) has 18 hits (ECM21) involved in cell wal..biogenesis (92) Spar (test2) orthologous hit at 88% f3017/3099 (97.4%) over 3114bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2477/2517 (98.4%) over 2531bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2227/2274 (97.9%) over 2281bp for offset 0 <== THIS IS REAL YBL101C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL101C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/63 (0.0%). Conflicting: 0/63 (0.0%). NoInfo: 0/63 (0.0%). Certain keep: 63/63 (100.0%) ########################## YBL099W (1638bp = 546AA) (tdist=37.0k) has 8 hits (ATP1) mitochondrial F1F0-ATPa..ha subunit (96) Flanking ORFs are: YBL102W and YBL101W-A. YBL099W skipped ########################## YBL098W (1383bp = 461AA) (tdist=39.1k) has 8 hits (BNA4) YBL098W Spar (test2) orthologous hit at 91% f1383/1383 (100.0%) over 1383bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1365/1381 (98.8%) over 1383bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f902/912 (98.9%) over 914bp for offset 0 <== THIS IS REAL YBL098W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL098W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/64 (0.0%). Conflicting: 0/64 (0.0%). NoInfo: 0/64 (0.0%). Certain keep: 64/64 (100.0%) ########################## YBL097W (2187bp = 729AA) (tdist=40.9k) has 50 hits (BRN1) involved in chromosome..uman BRRN1 (155) Spar (test2) orthologous hit at 87% f2172/2183 (99.5%) over 2186bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1089/1271 (85.7%) over 1292bp for offset 2 Smik (test3) Longest island has f97 at 84% over 1051bp <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1330/1443 (92.2%) over 1455bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k |___|___|___|___|___|___|___|___|____|___|___|___|___|___|___|___|___|____|___|___|___|___| 97f 84% 1051bp Sm130full |==========================================>.........> | YBL097W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL097W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/65 (0.0%). Conflicting: 0/65 (0.0%). NoInfo: 0/65 (0.0%). Certain keep: 65/65 (100.0%) ########################## YBL093C (663bp = 221AA) (tdist=44.2k) has 6 hits (ROX3) RNA polymerase II holoen..or subunit (101) Spar (test2) orthologous hit at 92% f663/663 (100.0%) over 663bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 89% f660/663 (99.5%) over 663bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f659/663 (99.4%) over 663bp for offset 0 <== THIS IS REAL YBL093C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL093C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/66 (0.0%). Conflicting: 0/66 (0.0%). NoInfo: 0/66 (0.0%). Certain keep: 66/66 (100.0%) ########################## YBL092W (393bp = 131AA) (tdist=45.9k) has 5 hits (RPL32) Ribosomal protein L32 Spar (test2) orthologous hit at 97% f393/393 (100.0%) over 393bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 97% f366/391 (93.6%) over 392bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f393/393 (100.0%) over 393bp for offset 0 <== THIS IS REAL YBL092W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL092W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/67 (0.0%). Conflicting: 0/67 (0.0%). NoInfo: 0/67 (0.0%). Certain keep: 67/67 (100.0%) ########################## YBL091C (1266bp = 422AA) (tdist=47.3k) has 209 hits (MAP2) methionine aminopeptidase 2 Spar (test2) orthologous hit at 91% f1266/1266 (100.0%) over 1266bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1266/1266 (100.0%) over 1266bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1263/1265 (99.8%) over 1266bp for offset 0 <== THIS IS REAL YBL091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/68 (0.0%). Conflicting: 0/68 (0.0%). NoInfo: 0/68 (0.0%). Certain keep: 68/68 (100.0%) ########################## YBL090W (534bp = 178AA) (tdist=48.8k) has 8 hits (MRP21) Component of the small .. ribosomes (114) Spar (test2) orthologous hit at 89% f534/534 (100.0%) over 534bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f534/534 (100.0%) over 534bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f519/531 (97.7%) over 534bp for offset 0 <== THIS IS REAL YBL090W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL090W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/69 (0.0%). Conflicting: 0/69 (0.0%). NoInfo: 0/69 (0.0%). Certain keep: 69/69 (100.0%) ########################## YBL088C (8364bp = 2788AA) has 32 hits (TEL1) putative phosphatidylinositol kinase Spar (test2) orthologous hit at 87% f8355/8362 (99.9%) over 8364bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f5518/5564 (99.2%) over 5578bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f8177/8334 (98.1%) over 8364bp for offset 0 <== THIS IS REAL YBL088C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL088C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/70 (0.0%). Conflicting: 0/70 (0.0%). NoInfo: 0/70 (0.0%). Certain keep: 70/70 (100.0%) ########################## YBL085W (2943bp = 981AA) has 61 hits (BOI1) BEM1-binding protein Spar (test2) orthologous hit at 89% f2930/2937 (99.8%) over 2943bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1906/2001 (95.3%) over 2013bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f1860/1892 (98.3%) over 1898bp for offset 0 <== THIS IS REAL YBL085W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL085W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/71 (0.0%). Conflicting: 0/71 (0.0%). NoInfo: 0/71 (0.0%). Certain keep: 71/71 (100.0%) ########################## YBL084C (2277bp = 759AA) has 766 hits (CDC27) component of the anaphase-promoting complex Spar (test2) orthologous hit at 90% f1176/1205 (97.6%) over 1207bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1156/1173 (98.6%) over 1176bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 54% f263/774 (34.0%) over 809bp for offset 1 Sbay (test3) Longest island has f78 at 51% over 85bp Sbay (test2) non-orthologous hit at 53% f293/704 (41.6%) over 739bp for offset 2 Sbay (test3) Longest island has f81 at 47% over 68bp Sbay (test2) non-orthologous hit at 53% f226/609 (37.1%) over 642bp for offset 2 Sbay (test3) Longest island has f85 at 59% over 115bp Sbay (test2) non-orthologous hit at 55% f223/551 (40.5%) over 578bp for offset 0 Sbay (test3) Longest island has f100 at 74% over 78bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k |__|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|__|___| 100f 8985f 59278f 51% 85bp Sb74full ||oo>...|=>..|>|xxx>............> | 88f1081f 80f 61% 61b1055f 59% 49bp Sb459full ||x>|>|xx>|x>........|=|=>...> | 86f 587f85f 52% 585f 59% 115bp Sb550brk |...|oo>.|o>|x>......|xxxx> | 86f 77782f 3981100f 74% 78bp Sb843full |.....|>...|>|x>...|>|xx> | YBL084C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YBL084C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 0/72 (0.0%). Conflicting: 0/72 (0.0%). NoInfo: 0/72 (0.0%). Certain keep: 72/72 (100.0%) ########################## YBL082C (1377bp = 459AA) has 5 hits (RHK1) putative Dol-P-Man dependent alpha(1-..saccharide (167) Flanking ORFs are: YBL085W and YBL083C. YBL082C skipped ########################## YBL080C (1626bp = 542AA) has 5 hits (PET112) 62-kDa protein Spar (test2) orthologous hit at 89% f1626/1626 (100.0%) over 1626bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1618/1625 (99.6%) over 1626bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1137/1625 (70.0%) over 1626bp for offset 1 Sbay (test3) Longest island has f99 at 79% over 1148bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k1k |____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|_____|____|_| 100f 78% 479bp 99f 79% 1148bp Sb118full |=========================|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YBL080C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL080C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/73 (0.0%). Conflicting: 0/73 (0.0%). NoInfo: 0/73 (0.0%). Certain keep: 73/73 (100.0%) ########################## YBL079W (4509bp = 1503AA) has 36 hits (NUP170) Nucleoporin highly similar to Nup..th NUP155) (157) Spar (test2) orthologous hit at 90% f4405/4408 (99.9%) over 4408bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f4487/4501 (99.7%) over 4509bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1564/1575 (99.3%) over 1577bp for offset 0 <== THIS IS REAL YBL079W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL079W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/74 (0.0%). Conflicting: 0/74 (0.0%). NoInfo: 0/74 (0.0%). Certain keep: 74/74 (100.0%) ########################## YBL078C (354bp = 118AA) has 6 hits (AUT7) Aut7p has homology to LC3, a microtubu.. from rat. (111) Spar (test2) orthologous hit at 93% f354/354 (100.0%) over 354bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f354/354 (100.0%) over 354bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f354/354 (100.0%) over 354bp for offset 0 <== THIS IS REAL YBL078C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL078C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/75 (0.0%). Conflicting: 0/75 (0.0%). NoInfo: 0/75 (0.0%). Certain keep: 75/75 (100.0%) ########################## YBL076C (3219bp = 1073AA) has 14 hits (ILS1) cytoplasmic isoleucyl-tRNA synthetase Flanking ORFs are: YBL079W and YBL077W. YBL076C skipped ########################## YBL075C (1950bp = 650AA) has 63 hits (SSA3) heat-inducible cytosolic member of t..ein family (115) Spar (test2) orthologous hit at 90% f1950/1950 (100.0%) over 1950bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1933/1943 (99.5%) over 1950bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1878/1886 (99.6%) over 1887bp for offset 0 <== THIS IS REAL YBL075C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL075C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/76 (0.0%). Conflicting: 0/76 (0.0%). NoInfo: 0/76 (0.0%). Certain keep: 76/76 (100.0%) ########################## YBL074C (1068bp = 356AA) has 12 hits (AAR2) MATa1-mRNA splicing factor Flanking ORFs are: YBL076C and YBL074C. YBL074C skipped ########################## YBL072C (603bp = 201AA) has 13 hits (RPS8A) Ribosomal protein S8A (S14A) (rp19) (YS9) Spar (test2) orthologous hit at 98% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 98% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL YBL072C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL072C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/77 (0.0%). Conflicting: 0/77 (0.0%). NoInfo: 0/77 (0.0%). Certain keep: 77/77 (100.0%) ########################## YBL069W (1290bp = 430AA) has 8 hits (AST1) involved in targeting of plasma membr..[H+]ATPase (94) Flanking ORFs are: YBL073W and YBL071W-A. YBL069W skipped ########################## YBL068W (1068bp = 356AA) has 23 hits (PRS4) ribose-phosphate pyrophosphokinase 4 Spar (test2) orthologous hit at 91% f1014/1064 (95.3%) over 1068bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1015/1056 (96.1%) over 1066bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f991/1061 (93.4%) over 1068bp for offset 0 <== THIS IS REAL YBL068W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL068W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/78 (0.0%). Conflicting: 0/78 (0.0%). NoInfo: 0/78 (0.0%). Certain keep: 78/78 (100.0%) ########################## YBL067C (2067bp = 689AA) has 20 hits (UBP13) ubiquitin carboxyl-terminal hydrolase Spar (test2) orthologous hit at 89% f1987/2067 (96.1%) over 2067bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1960/2058 (95.2%) over 2067bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1957/2062 (94.9%) over 2066bp for offset 0 <== THIS IS REAL YBL067C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL067C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/79 (0.0%). Conflicting: 0/79 (0.0%). NoInfo: 0/79 (0.0%). Certain keep: 79/79 (100.0%) ########################## YBL066C (3174bp = 1058AA) has 20 hits (SEF1) putative transcription factor Flanking ORFs are: YBL068W and YBL066C. YBL066C skipped ########################## YBL063W (3336bp = 1112AA) has 73 hits (KIP1) kinesin related protein Spar (test2) orthologous hit at 88% f3333/3335 (99.9%) over 3336bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f3285/3328 (98.7%) over 3336bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f3254/3323 (97.9%) over 3336bp for offset 0 <== THIS IS REAL YBL063W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL063W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/80 (0.0%). Conflicting: 0/80 (0.0%). NoInfo: 0/80 (0.0%). Certain keep: 80/80 (100.0%) ########################## YBL061C (2091bp = 697AA) has 15 hits (SKT5) Probable Ca++ binding membrane prote..renylated) (95) Flanking ORFs are: YBL064C and YBL062W. YBL061C skipped ########################## YBL058W (1272bp = 424AA) has 8 hits (SHP1) putative regulatory subunit for Glc7p..repression (127) Spar (test2) orthologous hit at 86% f1266/1271 (99.6%) over 1272bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1248/1267 (98.5%) over 1272bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f688/702 (98.0%) over 704bp for offset 0 <== THIS IS REAL YBL058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/81 (0.0%). Conflicting: 0/81 (0.0%). NoInfo: 0/81 (0.0%). Certain keep: 81/81 (100.0%) ########################## YBL056W (1407bp = 469AA) has 21 hits (PTC3) protein phosphatase type 2C Spar (test2) orthologous hit at 93% f1407/1407 (100.0%) over 1407bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1371/1398 (98.1%) over 1401bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1404/1404 (100.0%) over 1407bp for offset 0 <== THIS IS REAL YBL056W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL056W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/82 (0.0%). Conflicting: 0/82 (0.0%). NoInfo: 0/82 (0.0%). Certain keep: 82/82 (100.0%) ########################## YBL052C (2496bp = 832AA) has 387 hits (SAS3) involved in silencing at HMR Flanking ORFs are: YBL057C and YBL055C. YBL052C skipped ########################## YBL051C (2007bp = 669AA) has 110 hits (PIN4) Spar (test2) orthologous hit at 90% f1768/1775 (99.6%) over 1776bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1117/1163 (96.0%) over 1178bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1102/1113 (99.0%) over 1118bp for offset 0 <== THIS IS REAL YBL051C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL051C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/83 (0.0%). Conflicting: 0/83 (0.0%). NoInfo: 0/83 (0.0%). Certain keep: 83/83 (100.0%) ########################## YBL047C (4146bp = 1382AA) has 31 hits (EDE1) EH domain protein involved in endocytosis Spar (test2) orthologous hit at 87% f4046/4133 (97.9%) over 4146bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1496/1504 (99.5%) over 1509bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f3182/3314 (96.0%) over 3332bp for offset 0 <== THIS IS REAL YBL047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/84 (0.0%). Conflicting: 0/84 (0.0%). NoInfo: 0/84 (0.0%). Certain keep: 84/84 (100.0%) ########################## YBL045C (1374bp = 458AA) has 8 hits (COR1) 44 kDa core protein of yeast coenzyme.. reductase (107) Spar (test2) non-orthologous hit at 90% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f844/844 (100.0%) over 844bp for offset 0 <== THIS IS REAL YBL045C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL045C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/85 (0.0%). Conflicting: 0/85 (0.0%). NoInfo: 0/85 (0.0%). Certain keep: 85/85 (100.0%) ########################## YBL043W (774bp = 258AA) has 31 hits (ECM13) (putative) involved in cell wall biogenesis Spar (test2) orthologous hit at 86% f145/145 (100.0%) over 145bp for offset 0 Spar (test3) Longest island has f100 at 87% over 145bp Smik (test2) orthologous hit at 67% f609/753 (80.9%) over 774bp for offset 0 Smik (test3) Longest island has f90 at 71% over 467bp Sbay (test2) non-orthologous hit at 66% f363/409 (88.8%) over 419bp for offset 0 Sbay (test3) Longest island has f94 at 71% over 326bp <== THIS IS REAL 0 100 200 300 400 500 600 700 774 |__________|___________|__________|___________|___________|__________|___________|________| 100f 87% 145bp Sp605brk |===============> | 90f 71% 467bp Sm134full |=====================================================>...................................| 94f 71% 326bp Sb115full |=====================================>.........> | YBL043W: kill: - keep: Sbay Not a single protein hit, and yet, certain keep YBL043W - Certain Keep. Kill and Keep Sbay Current total: Certain kills: 0/86 (0.0%). Conflicting: 0/86 (0.0%). NoInfo: 0/86 (0.0%). Certain keep: 86/86 (100.0%) ########################## YBL042C (1920bp = 640AA) has 19 hits (FUI1) uridine permease Spar (test2) non-orthologous hit at 61% f1254/1525 (82.2%) over 1566bp for offset 2 Spar (test3) Longest island has f90 at 63% over 470bp <== THIS IS REAL Smik (test2) orthologous hit at 83% f1911/1918 (99.6%) over 1920bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1904/1917 (99.3%) over 1920bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 11k |___|____|____|___|____|____|___|____|____|___|____|____|___|____|____|____|___|____|____|| 88f 67% 397bp 87f 61% 451bp 90f 63% 470bp Sp197full |.|xxxxxxxxxxxxxxxxxx>|xxxxxxxxxxxxxxxxxxxx>|xxxxxxxxxxxxxxxxxxxxx>......> | YBL042C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL042C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/87 (0.0%). Conflicting: 0/87 (0.0%). NoInfo: 0/87 (0.0%). Certain keep: 87/87 (100.0%) ########################## YBL041W (726bp = 242AA) has 5 hits (PRE7) proteasome subunit Spar (test2) non-orthologous hit at 93% f726/726 (100.0%) over 726bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f726/726 (100.0%) over 726bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 87% f726/726 (100.0%) over 726bp for offset 0 <== THIS IS REAL YBL041W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL041W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/88 (0.0%). Conflicting: 0/88 (0.0%). NoInfo: 0/88 (0.0%). Certain keep: 88/88 (100.0%) ########################## YBL039C (1740bp = 580AA) has 10 hits (URA7) CTP synthase, highly homologus to UR..P synthase (95) Spar (test2) orthologous hit at 91% f1740/1740 (100.0%) over 1740bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1740/1740 (100.0%) over 1740bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1735/1739 (99.8%) over 1740bp for offset 0 <== THIS IS REAL YBL039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/89 (0.0%). Conflicting: 0/89 (0.0%). NoInfo: 0/89 (0.0%). Certain keep: 89/89 (100.0%) ########################## YBL038W (699bp = 233AA) has 6 hits (MRPL16) Mitochondrial ribosomal protein MRPL16 Spar (test2) orthologous hit at 89% f694/696 (99.7%) over 699bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f692/696 (99.4%) over 699bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f676/695 (97.3%) over 699bp for offset 0 <== THIS IS REAL YBL038W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL038W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/90 (0.0%). Conflicting: 0/90 (0.0%). NoInfo: 0/90 (0.0%). Certain keep: 90/90 (100.0%) ########################## YBL037W (3078bp = 1026AA) has 6 hits (APL3) Large subunit of clathrin associated..in complex (96) Spar (test2) orthologous hit at 89% f3077/3077 (100.0%) over 3077bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3071/3077 (99.8%) over 3078bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3059/3074 (99.5%) over 3078bp for offset 0 <== THIS IS REAL YBL037W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL037W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/91 (0.0%). Conflicting: 0/91 (0.0%). NoInfo: 0/91 (0.0%). Certain keep: 91/91 (100.0%) ########################## YBL035C (2118bp = 706AA) has 12 hits (POL12) B subunit of DNA polymerase alpha-p..se complex (94) Spar (test2) orthologous hit at 88% f2118/2118 (100.0%) over 2118bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1659/1877 (88.4%) over 1882bp for offset 1 Smik (test3) Longest island has f99 at 82% over 1683bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2101/2112 (99.5%) over 2118bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 22k |___|___|___|___|____|___|___|___|____|___|___|___|____|___|___|___|____|___|___|___|____|| 98f 82% 99f 82% 1683bp Sm134brk |=======|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YBL035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/92 (0.0%). Conflicting: 0/92 (0.0%). NoInfo: 0/92 (0.0%). Certain keep: 92/92 (100.0%) ########################## YBL034C (4542bp = 1514AA) has 78 hits (STU1) component of the mitotic spindle Spar (test2) orthologous hit at 88% f2372/2380 (99.7%) over 2381bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f3315/3594 (92.2%) over 3632bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f2871/3559 (80.7%) over 3633bp for offset 0 Sbay (test3) Longest island has f99 at 78% over 2412bp <== THIS IS REAL 01020304050607080901k1k1k1k1k1k1k1k1k1k2k2k2k2k2k2k2k2k2k2k3k3k3k3k3k3k3k3k3k3k4k4k4k4k4k44k ||_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|| 99f 78% 2412bp Sb115full |==============================================>.......................> | YBL034C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL034C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/93 (0.0%). Conflicting: 0/93 (0.0%). NoInfo: 0/93 (0.0%). Certain keep: 93/93 (100.0%) ########################## YBL033C (1038bp = 346AA) has 5 hits (RIB1) GTP cyclohydrolase II Spar (test2) orthologous hit at 89% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1035/1035 (100.0%) over 1038bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f990/1021 (97.0%) over 1036bp for offset 0 <== THIS IS REAL YBL033C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL033C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/94 (0.0%). Conflicting: 0/94 (0.0%). NoInfo: 0/94 (0.0%). Certain keep: 94/94 (100.0%) ########################## YBL032W (1146bp = 382AA) has 9 hits (HEK2) Hypothetical ORF Spar (test2) orthologous hit at 90% f1141/1145 (99.7%) over 1146bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f829/832 (99.6%) over 833bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 66% f617/733 (84.2%) over 749bp for offset 0 Sbay (test3) Longest island has f99 at 75% over 484bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|______|_______|_______|_______|_______|___| 99f 75% 484bp Sb115brk |.....................|=====================================> | YBL032W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL032W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/95 (0.0%). Conflicting: 0/95 (0.0%). NoInfo: 0/95 (0.0%). Certain keep: 95/95 (100.0%) ########################## YBL031W (1017bp = 339AA) has 6 hits (SHE1) Product of gene unknown Spar (test2) orthologous hit at 89% f1014/1014 (100.0%) over 1017bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f710/720 (98.6%) over 721bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f675/690 (97.8%) over 694bp for offset 0 <== THIS IS REAL YBL031W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL031W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/96 (0.0%). Conflicting: 0/96 (0.0%). NoInfo: 0/96 (0.0%). Certain keep: 96/96 (100.0%) ########################## YBL030C (957bp = 319AA) has 26 hits (PET9) mitochondrial ADP/ATP translocator Spar (test2) orthologous hit at 95% f957/957 (100.0%) over 957bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f957/957 (100.0%) over 957bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f957/957 (100.0%) over 957bp for offset 0 <== THIS IS REAL YBL030C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL030C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/97 (0.0%). Conflicting: 0/97 (0.0%). NoInfo: 0/97 (0.0%). Certain keep: 97/97 (100.0%) ########################## YBL025W (438bp = 146AA) has 5 hits (RRN10) Upstream activation factor subunit Spar (test2) orthologous hit at 91% f438/438 (100.0%) over 438bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f428/437 (97.9%) over 438bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f438/438 (100.0%) over 438bp for offset 0 <== THIS IS REAL YBL025W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL025W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/98 (0.0%). Conflicting: 0/98 (0.0%). NoInfo: 0/98 (0.0%). Certain keep: 98/98 (100.0%) ########################## YBL024W (2055bp = 685AA) has 14 hits (NCL1) Probable proliferating-cell nucleola..uman p120) (102) Spar (test2) orthologous hit at 91% f2044/2049 (99.8%) over 2055bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1977/1977 (100.0%) over 1977bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2041/2043 (99.9%) over 2044bp for offset 0 <== THIS IS REAL YBL024W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL024W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/99 (0.0%). Conflicting: 0/99 (0.0%). NoInfo: 0/99 (0.0%). Certain keep: 99/99 (100.0%) ########################## YBL023C (2607bp = 869AA) has 55 hits (MCM2) Minichromosome maintenance protein, ..ion factor (100) Spar (test2) orthologous hit at 91% f2607/2607 (100.0%) over 2607bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2607/2607 (100.0%) over 2607bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2587/2604 (99.3%) over 2607bp for offset 0 <== THIS IS REAL YBL023C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL023C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/100 (0.0%). Conflicting: 0/100 (0.0%). NoInfo: 0/100 (0.0%). Certain keep: 100/100 (100.0%) ########################## YBL022C (3402bp = 1134AA) has 20 hits (PIM1) mitochondrial ATP-dependent protease Spar (test2) orthologous hit at 90% f3168/3400 (93.2%) over 3402bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1728/1813 (95.3%) over 1820bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1692/1808 (93.6%) over 1824bp for offset 0 <== THIS IS REAL YBL022C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL022C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/101 (0.0%). Conflicting: 0/101 (0.0%). NoInfo: 0/101 (0.0%). Certain keep: 101/101 (100.0%) ########################## YBL021C (435bp = 145AA) has 4 hits (HAP3) transcriptional activator protein of CYC1 Spar (test2) non-orthologous hit at 92% f435/435 (100.0%) over 435bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f435/435 (100.0%) over 435bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f435/435 (100.0%) over 435bp for offset 0 <== THIS IS REAL YBL021C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL021C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/102 (0.0%). Conflicting: 0/102 (0.0%). NoInfo: 0/102 (0.0%). Certain keep: 102/102 (100.0%) ########################## YBL020W (1725bp = 575AA) has 10 hits (RFT1) 67 kDa integral membrane protein Spar (test2) non-orthologous hit at 90% f1674/1680 (99.6%) over 1681bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1724/1725 (99.9%) over 1725bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1113/1116 (99.7%) over 1120bp for offset 0 <== THIS IS REAL YBL020W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL020W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/103 (0.0%). Conflicting: 0/103 (0.0%). NoInfo: 0/103 (0.0%). Certain keep: 103/103 (100.0%) ########################## YBL019W (1563bp = 521AA) has 13 hits (APN2) AP endonuclease Spar (test2) orthologous hit at 89% f1558/1562 (99.7%) over 1563bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1520/1554 (97.8%) over 1563bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f397/416 (95.4%) over 419bp for offset 0 <== THIS IS REAL YBL019W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL019W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/104 (0.0%). Conflicting: 0/104 (0.0%). NoInfo: 0/104 (0.0%). Certain keep: 104/104 (100.0%) ########################## YBL017C (4740bp = 1580AA) has 92 hits (PEP1) carboxypeptidase Y sorting receptor..nal domain (175) Spar (test2) orthologous hit at 87% f4706/4735 (99.4%) over 4740bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2455/2477 (99.1%) over 2483bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1656/1775 (93.3%) over 1802bp for offset 0 <== THIS IS REAL YBL017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/105 (0.0%). Conflicting: 0/105 (0.0%). NoInfo: 0/105 (0.0%). Certain keep: 105/105 (100.0%) ########################## YBL016W (1062bp = 354AA) has 44 hits (FUS3) cdc2+/CDC28 related kinase with posi..onjugation (104) Spar (test2) orthologous hit at 90% f1062/1062 (100.0%) over 1062bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1062/1062 (100.0%) over 1062bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1062/1062 (100.0%) over 1062bp for offset 0 <== THIS IS REAL YBL016W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL016W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/106 (0.0%). Conflicting: 0/106 (0.0%). NoInfo: 0/106 (0.0%). Certain keep: 106/106 (100.0%) ########################## YBL015W (1581bp = 527AA) has 4 hits (ACH1) acetyl CoA hydrolase Spar (test2) orthologous hit at 92% f1581/1581 (100.0%) over 1581bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1581/1581 (100.0%) over 1581bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1573/1579 (99.6%) over 1580bp for offset 0 <== THIS IS REAL YBL015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/107 (0.0%). Conflicting: 0/107 (0.0%). NoInfo: 0/107 (0.0%). Certain keep: 107/107 (100.0%) ########################## YBL014C (2685bp = 895AA) has 11 hits (RRN6) member of yeast Pol I core factor (C..ng protein (138) Spar (test2) orthologous hit at 87% f2667/2677 (99.6%) over 2685bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2529/2566 (98.6%) over 2576bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1359/1487 (91.4%) over 1501bp for offset 0 <== THIS IS REAL YBL014C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL014C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/108 (0.0%). Conflicting: 0/108 (0.0%). NoInfo: 0/108 (0.0%). Certain keep: 108/108 (100.0%) ########################## YBL013W (1182bp = 394AA) has 6 hits (FMT1) Methionyl-tRNA Transformylase Spar (test2) orthologous hit at 85% f1158/1182 (98.0%) over 1182bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f699/699 (100.0%) over 699bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 66% f865/1130 (76.5%) over 1170bp for offset 1 Sbay (test3) Longest island has f90 at 75% over 389bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|______|_______|_______|______|_______|______|_______|_______|______|______| 90f 75% 389bp 89f 72% 296bp 89f 65% 218bp Sb412full ||============================>....................|=====================>|===============| YBL013W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YBL013W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 0/109 (0.0%). Conflicting: 0/109 (0.0%). NoInfo: 0/109 (0.0%). Certain keep: 109/109 (100.0%) ########################## YBL011W (2280bp = 760AA) has 503 hits (SCT1) suppressor of choline-transport mutants Flanking ORFs are: YBL014C and YBL012C. YBL011W skipped ########################## YBL008W (2523bp = 841AA) has 10 hits (HIR1) putative repressor protein homologou..ing signal (164) Spar (test2) orthologous hit at 89% f2522/2522 (100.0%) over 2522bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1180/1209 (97.6%) over 1210bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2500/2518 (99.3%) over 2523bp for offset 0 <== THIS IS REAL YBL008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/110 (0.0%). Conflicting: 0/110 (0.0%). NoInfo: 0/110 (0.0%). Certain keep: 110/110 (100.0%) ########################## YBL007C (3735bp = 1245AA) has 29 hits (SLA1) contains 3 SH3 domains, interacts with Bee1p Spar (test2) orthologous hit at 91% f2535/2539 (99.8%) over 2549bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2547/2677 (95.1%) over 2696bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1197/1208 (99.1%) over 1221bp for offset 0 <== THIS IS REAL YBL007C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL007C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/111 (0.0%). Conflicting: 0/111 (0.0%). NoInfo: 0/111 (0.0%). Certain keep: 111/111 (100.0%) ########################## YBL005W (2931bp = 977AA) has 17 hits (PDR3) Pleiotropic drug resistance protein 3 Spar (test2) orthologous hit at 88% f2754/2759 (99.8%) over 2759bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2596/2608 (99.5%) over 2618bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f2651/2896 (91.5%) over 2925bp for offset 0 <== THIS IS REAL YBL005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/112 (0.0%). Conflicting: 0/112 (0.0%). NoInfo: 0/112 (0.0%). Certain keep: 112/112 (100.0%) ########################## YBL003C (399bp = 133AA) has 13 hits (HTA2) Histone H2A (HTA1 and HTA2 code for n.. proteins) (105) Spar (test2) orthologous hit at 95% f399/399 (100.0%) over 399bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f206/206 (100.0%) over 206bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 91% f399/399 (100.0%) over 399bp for offset 0 <== THIS IS REAL YBL003C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBL003C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/113 (0.0%). Conflicting: 0/113 (0.0%). NoInfo: 0/113 (0.0%). Certain keep: 113/113 (100.0%) ########################## YBL002W (396bp = 132AA) has 8 hits (HTB2) Histone H2B (HTB1 and HTB2 code for ne.. proteins) (104) Spar (test2) orthologous hit at 91% f70/70 (100.0%) over 70bp for offset 0 Spar (test3) Longest island has f100 at 91% over 70bp Smik (test2) non-orthologous hit at 88% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL 0 100 200 300 396 |_____________________|______________________|______________________|_____________________| 100f 91% 70bp Sp194brk |===============> | YBL002W: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YBL002W - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 0/114 (0.0%). Conflicting: 0/114 (0.0%). NoInfo: 0/114 (0.0%). Certain keep: 114/114 (100.0%) ########################## YBL001C (315bp = 105AA) has 8 hits (ECM15) involved in cell wall biogenesis Spar (test2) orthologous hit at 89% f139/139 (100.0%) over 139bp for offset 0 Spar (test3) Longest island has f100 at 90% over 139bp Smik (test2) orthologous hit at 90% f315/315 (100.0%) over 315bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f315/315 (100.0%) over 315bp for offset 0 <== THIS IS REAL 0 100 200 300 315 |___________________________|____________________________|___________________________|____| 100f 90% 139bp Sp195brk |=======================================> | YBL001C: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YBL001C - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 0/115 (0.0%). Conflicting: 0/115 (0.0%). NoInfo: 0/115 (0.0%). Certain keep: 115/115 (100.0%) ########################## YBR001C (2343bp = 781AA) has 13 hits (NTH2) Neutral trehalase, highly homologous to Nth1p Spar (test2) non-orthologous hit at 90% f1763/1763 (100.0%) over 1763bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2336/2342 (99.7%) over 2343bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2334/2341 (99.7%) over 2343bp for offset 0 <== THIS IS REAL YBR001C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR001C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/116 (0.0%). Conflicting: 0/116 (0.0%). NoInfo: 0/116 (0.0%). Certain keep: 116/116 (100.0%) ########################## YBR002C (861bp = 287AA) has 8 hits (RER2) cis-prenyltransferase Spar (test2) orthologous hit at 93% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL YBR002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/117 (0.0%). Conflicting: 0/117 (0.0%). NoInfo: 0/117 (0.0%). Certain keep: 117/117 (100.0%) ########################## YBR003W (1422bp = 474AA) has 6 hits (COQ1) hexaprenyl pyrophosphate synthetase Spar (test2) orthologous hit at 90% f1422/1422 (100.0%) over 1422bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1422/1422 (100.0%) over 1422bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1411/1418 (99.5%) over 1421bp for offset 0 <== THIS IS REAL YBR003W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR003W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/118 (0.0%). Conflicting: 0/118 (0.0%). NoInfo: 0/118 (0.0%). Certain keep: 118/118 (100.0%) ########################## YBR006W (1494bp = 498AA) has 16 hits (UGA2) succinate semialdehyde dehydrogenase Spar (test2) orthologous hit at 91% f1494/1494 (100.0%) over 1494bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1486/1492 (99.6%) over 1494bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f983/1247 (78.8%) over 1247bp for offset 1 Sbay (test3) Longest island has f100 at 85% over 983bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____| 100f 85% 983bp 100f 84% 264bp Sb681brk |===========================================================|ooooooooooooooo| YBR006W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR006W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/119 (0.0%). Conflicting: 0/119 (0.0%). NoInfo: 0/119 (0.0%). Certain keep: 119/119 (100.0%) ########################## YBR008C (1647bp = 549AA) has 20 hits (FLR1) Major Facilitator Transporter Spar (test2) orthologous hit at 90% f1647/1647 (100.0%) over 1647bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1647/1647 (100.0%) over 1647bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f1612/1633 (98.7%) over 1640bp for offset 0 <== THIS IS REAL YBR008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/120 (0.0%). Conflicting: 0/120 (0.0%). NoInfo: 0/120 (0.0%). Certain keep: 120/120 (100.0%) ########################## YBR009C (312bp = 104AA) has 8 hits (HHF1) Histone H4 (HHF1 and HHF2 code for ide.. proteins) (96) Spar (test2) orthologous hit at 95% f312/312 (100.0%) over 312bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f312/312 (100.0%) over 312bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 94% f312/312 (100.0%) over 312bp for offset 0 <== THIS IS REAL YBR009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/121 (0.0%). Conflicting: 0/121 (0.0%). NoInfo: 0/121 (0.0%). Certain keep: 121/121 (100.0%) ########################## YBR010W (411bp = 137AA) has 8 hits (HHT1) Histone H3 (HHT1 and HHT2 code for ide.. proteins) (96) Spar (test2) orthologous hit at 95% f410/410 (100.0%) over 410bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f411/411 (100.0%) over 411bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f411/411 (100.0%) over 411bp for offset 0 <== THIS IS REAL YBR010W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR010W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/122 (0.0%). Conflicting: 0/122 (0.0%). NoInfo: 0/122 (0.0%). Certain keep: 122/122 (100.0%) ########################## YBR011C (864bp = 288AA) has 11 hits (IPP1) Inorganic pyrophosphatase Spar (test2) orthologous hit at 96% f864/864 (100.0%) over 864bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f864/864 (100.0%) over 864bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 89% f864/864 (100.0%) over 864bp for offset 0 <== THIS IS REAL YBR011C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR011C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/123 (0.0%). Conflicting: 0/123 (0.0%). NoInfo: 0/123 (0.0%). Certain keep: 123/123 (100.0%) ########################## YBR015C (1794bp = 598AA) has 15 hits (MNN2) putative Golgi alpha-1,2-mannosyltransferase Spar (test2) orthologous hit at 88% f1791/1793 (99.9%) over 1794bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1766/1789 (98.7%) over 1794bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1288/1302 (98.9%) over 1305bp for offset 0 <== THIS IS REAL YBR015C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR015C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/124 (0.0%). Conflicting: 0/124 (0.0%). NoInfo: 0/124 (0.0%). Certain keep: 124/124 (100.0%) ########################## YBR017C (2757bp = 919AA) has 186 hits (KAP104) karyopherin beta 2, yeast transportin Spar (test2) orthologous hit at 91% f2749/2751 (99.9%) over 2757bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2748/2751 (99.9%) over 2757bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2621/2628 (99.7%) over 2632bp for offset 0 <== THIS IS REAL YBR017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/125 (0.0%). Conflicting: 0/125 (0.0%). NoInfo: 0/125 (0.0%). Certain keep: 125/125 (100.0%) ########################## YBR018C (1101bp = 367AA) has 3 hits (GAL7) galactose-1-phosphate uridyl transferase Spar (test2) orthologous hit at 88% f1101/1101 (100.0%) over 1101bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1090/1099 (99.2%) over 1101bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1093/1099 (99.5%) over 1101bp for offset 0 <== THIS IS REAL YBR018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/126 (0.0%). Conflicting: 0/126 (0.0%). NoInfo: 0/126 (0.0%). Certain keep: 126/126 (100.0%) ########################## YBR019C (2100bp = 700AA) has 11 hits (GAL10) UDP-glucose 4-epimerase Spar (test2) orthologous hit at 89% f2100/2100 (100.0%) over 2100bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2100/2100 (100.0%) over 2100bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2087/2098 (99.5%) over 2100bp for offset 0 <== THIS IS REAL YBR019C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR019C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/127 (0.0%). Conflicting: 0/127 (0.0%). NoInfo: 0/127 (0.0%). Certain keep: 127/127 (100.0%) ########################## YBR020W (1587bp = 529AA) has 6 hits (GAL1) galactokinase Spar (test2) orthologous hit at 90% f1583/1586 (99.8%) over 1587bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1569/1584 (99.1%) over 1587bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1580/1586 (99.6%) over 1587bp for offset 0 <== THIS IS REAL YBR020W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR020W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/128 (0.0%). Conflicting: 0/128 (0.0%). NoInfo: 0/128 (0.0%). Certain keep: 128/128 (100.0%) ########################## YBR021W (1902bp = 634AA) has 17 hits (FUR4) uracil permease Spar (test2) orthologous hit at 92% f1898/1901 (99.8%) over 1902bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1902/1902 (100.0%) over 1902bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1902/1902 (100.0%) over 1902bp for offset 0 <== THIS IS REAL YBR021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/129 (0.0%). Conflicting: 0/129 (0.0%). NoInfo: 0/129 (0.0%). Certain keep: 129/129 (100.0%) ########################## YBR023C (3498bp = 1166AA) has 19 hits (CHS3) chitin synthase 3 Spar (test2) orthologous hit at 92% f3084/3084 (100.0%) over 3084bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f488/488 (100.0%) over 488bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1651/2354 (70.1%) over 2355bp for offset 2 Sbay (test3) Longest island has f100 at 86% over 1648bp <== THIS IS REAL 0 100203004050060070800901k 1k1k 1k 1k1k 1k1k 1k1k 2k 2k2k 2k2k 2k2k 2k 2k2k 3k3k 3k3k 3k 3k |_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__| 99f 84% 651bp 100f 86% 1648bp Sb808brk ||oooooooooooooooo|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YBR023C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR023C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/130 (0.0%). Conflicting: 0/130 (0.0%). NoInfo: 0/130 (0.0%). Certain keep: 130/130 (100.0%) ########################## YBR024W (906bp = 302AA) has 8 hits (SCO2) SCO1 protein homolog (S. cerevisiae) Spar (test2) orthologous hit at 91% f906/906 (100.0%) over 906bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f906/906 (100.0%) over 906bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f886/903 (98.1%) over 906bp for offset 0 <== THIS IS REAL YBR024W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR024W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/131 (0.0%). Conflicting: 0/131 (0.0%). NoInfo: 0/131 (0.0%). Certain keep: 131/131 (100.0%) ########################## YBR026C (1143bp = 381AA) has 4 hits (MRF1') Nuclear protein that binds to T-rich..g sequence (151) Spar (test2) orthologous hit at 91% f1143/1143 (100.0%) over 1143bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1138/1141 (99.7%) over 1142bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1143/1143 (100.0%) over 1143bp for offset 0 <== THIS IS REAL YBR026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/132 (0.0%). Conflicting: 0/132 (0.0%). NoInfo: 0/132 (0.0%). Certain keep: 132/132 (100.0%) ########################## YBR029C (1374bp = 458AA) has 13 hits (CDS1) CDP-diacylglycerol synthase, CTP-pho..synthetase (143) Spar (test2) orthologous hit at 93% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1370/1374 (99.7%) over 1374bp for offset 0 <== THIS IS REAL YBR029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/133 (0.0%). Conflicting: 0/133 (0.0%). NoInfo: 0/133 (0.0%). Certain keep: 133/133 (100.0%) ########################## YBR031W (1089bp = 363AA) has 9 hits (RPL4A) Ribosomal protein L4A (L2A) (rp2) (YL2) Spar (test2) orthologous hit at 96% f1089/1089 (100.0%) over 1089bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f1089/1089 (100.0%) over 1089bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f1089/1089 (100.0%) over 1089bp for offset 0 <== THIS IS REAL YBR031W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR031W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/134 (0.0%). Conflicting: 0/134 (0.0%). NoInfo: 0/134 (0.0%). Certain keep: 134/134 (100.0%) ########################## YBR033W (2760bp = 920AA) has 10 hits (EDS1) Expression dependent on Slt2 Spar (test2) orthologous hit at 84% f2750/2758 (99.7%) over 2760bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f2639/2744 (96.2%) over 2760bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f896/1005 (89.2%) over 1026bp for offset 0 Sbay (test3) Longest island has f87 at 70% over 710bp Sbay (test2) orthologous hit at 68% f874/1002 (87.2%) over 1017bp for offset 2 Sbay (test3) Longest island has f96 at 70% over 610bp <== THIS IS REAL 0 100200300 400500600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k2k |__|__|__|___|__|__|__|___|__|__|__|___|__|__|__|___|__|__|__|___|__|__|___|__|__|__|___|_| 87f 70% 710bp 88f 66% 314bp Sb103full |======================|=========> | 96f 70% 610bp 86f 68% 321bp Sb103full ||xxxxxxxxxxxxxxxxxxx>|xxxxxxxxxx> | YBR033W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR033W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/135 (0.0%). Conflicting: 0/135 (0.0%). NoInfo: 0/135 (0.0%). Certain keep: 135/135 (100.0%) ########################## YBR034C (1047bp = 349AA) has 7 hits (HMT1) nuclear protein arginine methyltransf..ng enzyme) (133) Spar (test2) orthologous hit at 92% f1047/1047 (100.0%) over 1047bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1047/1047 (100.0%) over 1047bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1043/1046 (99.7%) over 1047bp for offset 0 <== THIS IS REAL YBR034C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR034C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/136 (0.0%). Conflicting: 0/136 (0.0%). NoInfo: 0/136 (0.0%). Certain keep: 136/136 (100.0%) ########################## YBR035C (687bp = 229AA) has 5 hits (PDX3) pyridoxine (pyridoxiamine) phosphate oxidase Spar (test2) orthologous hit at 92% f687/687 (100.0%) over 687bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f687/687 (100.0%) over 687bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f584/687 (85.0%) over 687bp for offset 1 Sbay (test3) Longest island has f100 at 84% over 584bp <== THIS IS REAL 0 100 200 300 400 500 600 687 |____________|____________|____________|____________|____________|____________|___________| 100f 84% 584bp Sb103full |===========================================================================>.............| YBR035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/137 (0.0%). Conflicting: 0/137 (0.0%). NoInfo: 0/137 (0.0%). Certain keep: 137/137 (100.0%) ########################## YBR036C (1233bp = 411AA) has 6 hits (CSG2) contains 9 or 10 putative membrane sp..ding site) (165) Spar (test2) orthologous hit at 91% f1233/1233 (100.0%) over 1233bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1233/1233 (100.0%) over 1233bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1216/1230 (98.9%) over 1233bp for offset 0 <== THIS IS REAL YBR036C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR036C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/138 (0.0%). Conflicting: 0/138 (0.0%). NoInfo: 0/138 (0.0%). Certain keep: 138/138 (100.0%) ########################## YBR037C (888bp = 296AA) has 12 hits (SCO1) inner mitochondrial membrane protein Spar (test2) orthologous hit at 91% f852/852 (100.0%) over 852bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f854/854 (100.0%) over 854bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f843/847 (99.5%) over 848bp for offset 0 <== THIS IS REAL YBR037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/139 (0.0%). Conflicting: 0/139 (0.0%). NoInfo: 0/139 (0.0%). Certain keep: 139/139 (100.0%) ########################## YBR038W (2892bp = 964AA) has 24 hits (CHS2) chitin synthase 2 Spar (test2) orthologous hit at 91% f2891/2891 (100.0%) over 2891bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2891/2891 (100.0%) over 2891bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2806/2810 (99.9%) over 2816bp for offset 0 <== THIS IS REAL YBR038W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR038W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/140 (0.0%). Conflicting: 0/140 (0.0%). NoInfo: 0/140 (0.0%). Certain keep: 140/140 (100.0%) ########################## YBR039W (936bp = 312AA) has 5 hits (ATP3) gamma subunit of mitochondrial ATP synthase Spar (test2) orthologous hit at 93% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL YBR039W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR039W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/141 (0.0%). Conflicting: 0/141 (0.0%). NoInfo: 0/141 (0.0%). Certain keep: 141/141 (100.0%) ########################## YBR040W (897bp = 299AA) has 8 hits (FIG1) integral membrane protein Spar (test2) orthologous hit at 88% f897/897 (100.0%) over 897bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f897/897 (100.0%) over 897bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f885/895 (98.9%) over 897bp for offset 0 <== THIS IS REAL YBR040W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR040W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/142 (0.0%). Conflicting: 0/142 (0.0%). NoInfo: 0/142 (0.0%). Certain keep: 142/142 (100.0%) ########################## YBR041W (1872bp = 624AA) has 5 hits (FAT1) Fatty acid transporter Spar (test2) orthologous hit at 92% f1853/1869 (99.1%) over 1872bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1856/1870 (99.3%) over 1872bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f650/666 (97.6%) over 669bp for offset 0 <== THIS IS REAL YBR041W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR041W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/143 (0.0%). Conflicting: 0/143 (0.0%). NoInfo: 0/143 (0.0%). Certain keep: 143/143 (100.0%) ########################## YBR043C (2070bp = 690AA) has 8 hits (AQR2) YBR043C Spar (test2) orthologous hit at 89% f2061/2068 (99.7%) over 2070bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2065/2069 (99.8%) over 2070bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1110/1130 (98.2%) over 1132bp for offset 0 <== THIS IS REAL YBR043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/144 (0.0%). Conflicting: 0/144 (0.0%). NoInfo: 0/144 (0.0%). Certain keep: 144/144 (100.0%) ########################## YBR044C (1722bp = 574AA) has 8 hits (TCM62) mitochondrial protein; (putative) chaperone Spar (test2) orthologous hit at 87% f1462/1482 (98.7%) over 1482bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1683/1720 (97.8%) over 1722bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1667/1713 (97.3%) over 1718bp for offset 1 <== THIS IS REAL YBR044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/145 (0.0%). Conflicting: 0/145 (0.0%). NoInfo: 0/145 (0.0%). Certain keep: 145/145 (100.0%) ########################## YBR045C (1722bp = 574AA) has 16 hits (GIP1) putative Glc7 regulatory subunit Spar (test2) orthologous hit at 88% f1706/1722 (99.1%) over 1722bp for offset 1 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f1245/1255 (99.2%) over 1257bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1039/1061 (97.9%) over 1068bp for offset 0 <== THIS IS REAL YBR045C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR045C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/146 (0.0%). Conflicting: 0/146 (0.0%). NoInfo: 0/146 (0.0%). Certain keep: 146/146 (100.0%) ########################## YBR046C (1005bp = 335AA) has 8 hits (ZTA1) Homolog to quinone oxidoreductase (E. coli) Spar (test2) orthologous hit at 90% f1005/1005 (100.0%) over 1005bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f369/369 (100.0%) over 369bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f968/1000 (96.8%) over 1004bp for offset 0 <== THIS IS REAL YBR046C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR046C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/147 (0.0%). Conflicting: 0/147 (0.0%). NoInfo: 0/147 (0.0%). Certain keep: 147/147 (100.0%) ########################## YBR049C (2433bp = 811AA) has 209 hits (REB1) RNA polymerase I enhancer binding protein Spar (test2) orthologous hit at 91% f2429/2429 (100.0%) over 2432bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 72% f755/971 (77.8%) over 996bp for offset 0 Smik (test3) Longest island has f97 at 83% over 648bp <== THIS IS REAL Sbay (test2) orthologous hit at 73% f962/1097 (87.7%) over 1118bp for offset 0 Sbay (test3) Longest island has f95 at 78% over 911bp <== THIS IS REAL 0 100 200 300400 500 600700 800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k2k |__|___|___|__|___|___|__|___|___|__|___|___|___|__|___|___|__|___|___|__|___|___|___|__|_| 97f 83% 648bp Sm151brk |=======================>...........> | 95f 78% 911bp Sb106brk |.......|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | YBR049C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR049C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/148 (0.0%). Conflicting: 0/148 (0.0%). NoInfo: 0/148 (0.0%). Certain keep: 148/148 (100.0%) ########################## YBR050C (1017bp = 339AA) has 30 hits (REG2) putative Glc7 regulatory subunit Flanking ORFs are: YBR048W and YBR050C. YBR050C skipped ########################## YBR054W (1035bp = 345AA) has 83 hits (YRO2) Homolog to HSP30 heat shock protein ..evisiae) 7 (102) Spar (test2) orthologous hit at 93% f1035/1035 (100.0%) over 1035bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1028/1031 (99.7%) over 1034bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1030/1031 (99.9%) over 1034bp for offset 0 <== THIS IS REAL YBR054W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR054W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/149 (0.0%). Conflicting: 0/149 (0.0%). NoInfo: 0/149 (0.0%). Certain keep: 149/149 (100.0%) ########################## YBR055C (2700bp = 900AA) has 31 hits (PRP6) RNA splicing factor Spar (test2) orthologous hit at 86% f2690/2699 (99.7%) over 2700bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1827/1834 (99.6%) over 1836bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2552/2619 (97.4%) over 2631bp for offset 0 <== THIS IS REAL YBR055C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR055C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/150 (0.0%). Conflicting: 0/150 (0.0%). NoInfo: 0/150 (0.0%). Certain keep: 150/150 (100.0%) ########################## YBR057C (1101bp = 367AA) has 22 hits (MUM2) similar to ubiquitin C-terminal hydr..in meiosis (106) Spar (test2) orthologous hit at 92% f1101/1101 (100.0%) over 1101bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1098/1098 (100.0%) over 1101bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1096/1097 (99.9%) over 1097bp for offset 0 <== THIS IS REAL YBR057C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR057C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/151 (0.0%). Conflicting: 0/151 (0.0%). NoInfo: 0/151 (0.0%). Certain keep: 151/151 (100.0%) ########################## YBR058C (2412bp = 804AA) has 14 hits (UBP14) Ubiquitin-specific protease Spar (test2) orthologous hit at 87% f2403/2411 (99.7%) over 2412bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2345/2398 (97.8%) over 2407bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2337/2405 (97.2%) over 2412bp for offset 0 <== THIS IS REAL YBR058C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR058C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/152 (0.0%). Conflicting: 0/152 (0.0%). NoInfo: 0/152 (0.0%). Certain keep: 152/152 (100.0%) ########################## YBR058C-A (243bp = 81AA) has 11 hits (TSC3) involved in sphingolipid biosynthesis Spar (test2) orthologous hit at 91% f243/243 (100.0%) over 243bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f243/243 (100.0%) over 243bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f243/243 (100.0%) over 243bp for offset 0 <== THIS IS REAL YBR058C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR058C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/153 (0.0%). Conflicting: 0/153 (0.0%). NoInfo: 0/153 (0.0%). Certain keep: 153/153 (100.0%) ########################## YBR059C (3327bp = 1109AA) has 77 hits (AKL1) Serine-threonine protein kinase Spar (test2) orthologous hit at 89% f2547/2612 (97.5%) over 2623bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f3167/3306 (95.8%) over 3327bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f3016/3275 (92.1%) over 3327bp for offset 0 <== THIS IS REAL YBR059C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR059C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/154 (0.0%). Conflicting: 0/154 (0.0%). NoInfo: 0/154 (0.0%). Certain keep: 154/154 (100.0%) ########################## YBR060C (1863bp = 621AA) has 20 hits (ORC2) origin recognition complex subunit 2 Spar (test2) orthologous hit at 87% f1843/1860 (99.1%) over 1863bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f859/859 (100.0%) over 859bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1801/1854 (97.1%) over 1862bp for offset 0 <== THIS IS REAL YBR060C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR060C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/155 (0.0%). Conflicting: 0/155 (0.0%). NoInfo: 0/155 (0.0%). Certain keep: 155/155 (100.0%) ########################## YBR061C (933bp = 311AA) has 7 hits (TRM7) 2'-O-ribose tRNA anticodon loop methyl..ransferase (91) Spar (test2) orthologous hit at 91% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f929/932 (99.7%) over 933bp for offset 0 <== THIS IS REAL YBR061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/156 (0.0%). Conflicting: 0/156 (0.0%). NoInfo: 0/156 (0.0%). Certain keep: 156/156 (100.0%) ########################## YBR065C (1095bp = 365AA) has 8 hits (ECM2) (putative) involved in cell wall biog..A splicing (104) Spar (test2) orthologous hit at 86% f1095/1095 (100.0%) over 1095bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1078/1093 (98.6%) over 1095bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f447/545 (82.0%) over 561bp for offset 2 Sbay (test3) Longest island has f95 at 73% over 446bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|_______|________|_______|_______|_______|_______|________|_______| 95f 73% 446bp Sb108brk |.......|====================================>> | YBR065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/157 (0.0%). Conflicting: 0/157 (0.0%). NoInfo: 0/157 (0.0%). Certain keep: 157/157 (100.0%) ########################## YBR066C (663bp = 221AA) has 17 hits (NRG2) homologue of NRG1 Spar (test2) orthologous hit at 89% f663/663 (100.0%) over 663bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f646/660 (97.9%) over 663bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f653/661 (98.8%) over 663bp for offset 0 <== THIS IS REAL YBR066C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR066C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/158 (0.0%). Conflicting: 0/158 (0.0%). NoInfo: 0/158 (0.0%). Certain keep: 158/158 (100.0%) ########################## YBR067C (633bp = 211AA) has 157 hits (TIP1) cell wall mannoprotein Spar (test2) orthologous hit at 89% f631/633 (99.7%) over 633bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f571/609 (93.8%) over 620bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f469/502 (93.4%) over 510bp for offset 2 <== THIS IS REAL YBR067C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR067C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/159 (0.0%). Conflicting: 0/159 (0.0%). NoInfo: 0/159 (0.0%). Certain keep: 159/159 (100.0%) ########################## YBR068C (1830bp = 610AA) has 52 hits (BAP2) probable amino acid permease for leu..isoleucine (108) Spar (test2) orthologous hit at 90% f1830/1830 (100.0%) over 1830bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1810/1827 (99.1%) over 1829bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 62% f765/928 (82.4%) over 948bp for offset 1 Sbay (test3) Longest island has f91 at 65% over 466bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k1k |___|____|____|____|____|____|____|____|____|____|____|____|___|____|____|____|____|____|_| 91f 65% 466bp Sb110full |oooooooooooooooooooooo>.......................> | YBR068C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR068C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/160 (0.0%). Conflicting: 0/160 (0.0%). NoInfo: 0/160 (0.0%). Certain keep: 160/160 (100.0%) ########################## YBR069C (1860bp = 620AA) has 58 hits (TAT1) Amino acid transport protein for val..d tyrosine (118) Spar (test2) orthologous hit at 89% f1860/1860 (100.0%) over 1860bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1842/1851 (99.5%) over 1859bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1844/1856 (99.4%) over 1860bp for offset 0 <== THIS IS REAL YBR069C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR069C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/161 (0.0%). Conflicting: 0/161 (0.0%). NoInfo: 0/161 (0.0%). Certain keep: 161/161 (100.0%) ########################## YBR072W (645bp = 215AA) has 3 hits (HSP26) heat shock protein 26 Spar (test2) orthologous hit at 91% f645/645 (100.0%) over 645bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f645/645 (100.0%) over 645bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f642/642 (100.0%) over 645bp for offset 0 <== THIS IS REAL YBR072W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR072W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/162 (0.0%). Conflicting: 0/162 (0.0%). NoInfo: 0/162 (0.0%). Certain keep: 162/162 (100.0%) ########################## YBR073W (2877bp = 959AA) has 45 hits (RDH54) Putative helicase similar to RAD54 Spar (test2) orthologous hit at 87% f2807/2876 (97.6%) over 2877bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2673/2846 (93.9%) over 2863bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f617/619 (99.7%) over 620bp for offset 0 <== THIS IS REAL YBR073W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR073W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/163 (0.0%). Conflicting: 0/163 (0.0%). NoInfo: 0/163 (0.0%). Certain keep: 163/163 (100.0%) ########################## YBR076W (1020bp = 340AA) has 8 hits (ECM8) involved in cell wall biogenesis Spar (test2) orthologous hit at 88% f875/1013 (86.4%) over 1016bp for offset 2 Spar (test3) Longest island has f100 at 90% over 836bp <== THIS IS REAL Smik (test2) orthologous hit at 85% f254/391 (65.0%) over 391bp for offset 1 Smik (test3) Longest island has f100 at 87% over 254bp Sbay (test2) orthologous hit at 78% f838/963 (87.0%) over 969bp for offset 2 Sbay (test3) Longest island has f98 at 79% over 838bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k1k |_______|________|________|________|________|_______|________|________|________|________|_| 100f 90% 836bp Sp199full |.....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>........>| 100f 87% 254bp Sm156brk |......|oooooooooooooooooooooo>....> | 98f 79% 838bp Sb112full |.....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>....> | YBR076W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YBR076W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 0/164 (0.0%). Conflicting: 0/164 (0.0%). NoInfo: 0/164 (0.0%). Certain keep: 164/164 (100.0%) ########################## YBR079C (2895bp = 965AA) has 30 hits (RPG1) translation initiation factor eIF3 Spar (test2) orthologous hit at 91% f2795/2798 (99.9%) over 2798bp for offset 1 <== THIS IS REAL Smik (test2) non-orthologous hit at 89% f1304/1304 (100.0%) over 1304bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1610/1622 (99.3%) over 1625bp for offset 0 <== THIS IS REAL YBR079C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR079C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/165 (0.0%). Conflicting: 0/165 (0.0%). NoInfo: 0/165 (0.0%). Certain keep: 165/165 (100.0%) ########################## YBR080C (2277bp = 759AA) has 59 hits (SEC18) cytoplasmic protein involved in pro..gi; ATPase (123) Spar (test2) orthologous hit at 93% f1782/2276 (78.3%) over 2277bp for offset 0 Spar (test3) Longest island has f100 at 93% over 1782bp <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1306/1306 (100.0%) over 1306bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2277/2277 (100.0%) over 2277bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k |__|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|__|___| 100f 93% 494bp 100f 93% 1782bp Sp199full |==================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YBR080C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR080C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/166 (0.0%). Conflicting: 0/166 (0.0%). NoInfo: 0/166 (0.0%). Certain keep: 166/166 (100.0%) ########################## YBR081C (3999bp = 1333AA) has 500 hits (SPT7) transcription factor, member of th..GA complex (120) Spar (test2) orthologous hit at 90% f1621/1698 (95.5%) over 1699bp for offset 1 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f2171/2208 (98.3%) over 2220bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1967/2068 (95.1%) over 2079bp for offset 0 <== THIS IS REAL YBR081C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR081C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/167 (0.0%). Conflicting: 0/167 (0.0%). NoInfo: 0/167 (0.0%). Certain keep: 167/167 (100.0%) ########################## YBR083W (1461bp = 487AA) has 9 hits (TEC1) transcription factor of the TEA/ATTS ..expression (134) Spar (test2) orthologous hit at 90% f976/1461 (66.8%) over 1461bp for offset 1 Spar (test3) Longest island has f100 at 91% over 979bp <== THIS IS REAL Smik (test2) orthologous hit at 84% f1448/1458 (99.3%) over 1461bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1436/1456 (98.6%) over 1461bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|______|_____|_____|_____|_____|_____|______|_____|___| 100f 89% 485bp 100f 91% 979bp Sp200full |============================>|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YBR083W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR083W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/168 (0.0%). Conflicting: 0/168 (0.0%). NoInfo: 0/168 (0.0%). Certain keep: 168/168 (100.0%) ########################## YBR084W (2928bp = 976AA) has 16 hits (MIS1) mitochondrial C1-tetrahydroflate synthase Spar (test2) non-orthologous hit at 91% f2928/2928 (100.0%) over 2928bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1765/1765 (100.0%) over 1765bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2913/2925 (99.6%) over 2927bp for offset 0 <== THIS IS REAL YBR084W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR084W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/169 (0.0%). Conflicting: 0/169 (0.0%). NoInfo: 0/169 (0.0%). Certain keep: 169/169 (100.0%) ########################## YBR085W (924bp = 308AA) has 14 hits (AAC3) mitochondrial ADP/ATP translocator Spar (test2) orthologous hit at 90% f924/924 (100.0%) over 924bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f916/923 (99.2%) over 924bp for offset 0 <== THIS IS REAL YBR085W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR085W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/170 (0.0%). Conflicting: 0/170 (0.0%). NoInfo: 0/170 (0.0%). Certain keep: 170/170 (100.0%) ########################## YBR086C (2841bp = 947AA) has 20 hits (IST2) Probable transmembrane protein Spar (test2) orthologous hit at 87% f2679/2694 (99.4%) over 2699bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2707/2780 (97.4%) over 2799bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2021/2049 (98.6%) over 2057bp for offset 0 <== THIS IS REAL YBR086C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR086C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/171 (0.0%). Conflicting: 0/171 (0.0%). NoInfo: 0/171 (0.0%). Certain keep: 171/171 (100.0%) ########################## YBR087W (1065bp = 355AA) has 7 hits (RFC5) Subunit 5 of Replication Factor C; ho..Da subunit (116) Spar (test2) orthologous hit at 90% f1065/1065 (100.0%) over 1065bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1055/1063 (99.2%) over 1065bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1055/1063 (99.2%) over 1065bp for offset 0 <== THIS IS REAL YBR087W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR087W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/172 (0.0%). Conflicting: 0/172 (0.0%). NoInfo: 0/172 (0.0%). Certain keep: 172/172 (100.0%) ########################## YBR088C (777bp = 259AA) has 7 hits (POL30) Proliferating cell nuclear antigen Flanking ORFs are: YBR086C and YBR088C. YBR088C skipped ########################## YBR089C-A (300bp = 100AA) has 11 hits (NHP6B) 11-kDa nonhistone chromosomal protein Flanking ORFs are: YBR086C and YBR088C. YBR089C-A skipped ########################## YBR091C (330bp = 110AA) has 7 hits (MRS5) Nuclear protein involved in mitochondr..n splicing (99) Spar (test2) non-orthologous hit at 91% f325/329 (98.8%) over 330bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f320/329 (97.3%) over 330bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL YBR091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/173 (0.0%). Conflicting: 0/173 (0.0%). NoInfo: 0/173 (0.0%). Certain keep: 173/173 (100.0%) ########################## YBR092C (1404bp = 468AA) has 19 hits (PHO3) Acid phosphatase, constitutive Spar (test2) orthologous hit at 91% f1370/1384 (99.0%) over 1385bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1396/1401 (99.6%) over 1403bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL YBR092C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR092C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/174 (0.0%). Conflicting: 0/174 (0.0%). NoInfo: 0/174 (0.0%). Certain keep: 174/174 (100.0%) ########################## YBR093C (1404bp = 468AA) has 18 hits (PHO5) Acid phosphatase, repressible Spar (test2) orthologous hit at 91% f1404/1404 (100.0%) over 1404bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1392/1402 (99.3%) over 1404bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1392/1399 (99.5%) over 1402bp for offset 0 <== THIS IS REAL YBR093C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR093C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/175 (0.0%). Conflicting: 0/175 (0.0%). NoInfo: 0/175 (0.0%). Certain keep: 175/175 (100.0%) ########################## YBR097W (4365bp = 1455AA) has 32 hits (VPS15) Myristoylated Serine/threonine pro..in sorting (128) Spar (test2) orthologous hit at 89% f4358/4364 (99.9%) over 4365bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f406/406 (100.0%) over 406bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f4313/4355 (99.0%) over 4365bp for offset 0 <== THIS IS REAL YBR097W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR097W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/176 (0.0%). Conflicting: 0/176 (0.0%). NoInfo: 0/176 (0.0%). Certain keep: 176/176 (100.0%) ########################## YBR098W (1416bp = 472AA) has 8 hits (MMS4) Flanking ORFs are: YBR096W and YBR098W. YBR098W skipped ########################## YBR102C (2262bp = 754AA) has 11 hits (EXO84) Component of the exocyst complex; h..ed rExo84. (114) Spar (test2) orthologous hit at 90% f2258/2261 (99.9%) over 2262bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2235/2257 (99.0%) over 2262bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2231/2252 (99.1%) over 2262bp for offset 0 <== THIS IS REAL YBR102C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR102C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/177 (0.0%). Conflicting: 0/177 (0.0%). NoInfo: 0/177 (0.0%). Certain keep: 177/177 (100.0%) ########################## YBR103W (1608bp = 536AA) has 13 hits (SIF2) 535 amino acid protein containing 4 ..ion signal (127) Spar (test2) orthologous hit at 87% f1439/1454 (99.0%) over 1455bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1429/1444 (99.0%) over 1447bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1407/1435 (98.0%) over 1438bp for offset 1 <== THIS IS REAL YBR103W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR103W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/178 (0.0%). Conflicting: 0/178 (0.0%). NoInfo: 0/178 (0.0%). Certain keep: 178/178 (100.0%) ########################## YBR104W (990bp = 330AA) has 16 hits (YMC2) mitochondrial carrier protein Spar (test2) orthologous hit at 92% f990/990 (100.0%) over 990bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f990/990 (100.0%) over 990bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f983/989 (99.4%) over 990bp for offset 0 <== THIS IS REAL YBR104W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR104W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/179 (0.0%). Conflicting: 0/179 (0.0%). NoInfo: 0/179 (0.0%). Certain keep: 179/179 (100.0%) ########################## YBR105C (1089bp = 363AA) has 7 hits (VID24) peripheral vesicle membrane protein Spar (test2) orthologous hit at 87% f1081/1088 (99.4%) over 1089bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1071/1087 (98.5%) over 1089bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1060/1082 (98.0%) over 1089bp for offset 0 <== THIS IS REAL YBR105C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR105C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/180 (0.0%). Conflicting: 0/180 (0.0%). NoInfo: 0/180 (0.0%). Certain keep: 180/180 (100.0%) ########################## YBR106W (567bp = 189AA) has 8 hits (PHO88) regulator of Pho81, involved in regul.. transport (105) Spar (test2) orthologous hit at 95% f567/567 (100.0%) over 567bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f567/567 (100.0%) over 567bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f567/567 (100.0%) over 567bp for offset 0 <== THIS IS REAL YBR106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/181 (0.0%). Conflicting: 0/181 (0.0%). NoInfo: 0/181 (0.0%). Certain keep: 181/181 (100.0%) ########################## YBR107C (738bp = 246AA) has 3 hits (IML3) weakly similar to chitin synthases, in..nd mitosis (125) Spar (test2) orthologous hit at 88% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f725/737 (98.4%) over 738bp for offset 0 <== THIS IS REAL YBR107C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR107C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/182 (0.0%). Conflicting: 0/182 (0.0%). NoInfo: 0/182 (0.0%). Certain keep: 182/182 (100.0%) ########################## YBR109C (444bp = 148AA) has 12 hits (CMD1) Calmodulin Spar (test2) orthologous hit at 94% f444/444 (100.0%) over 444bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f442/442 (100.0%) over 442bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f444/444 (100.0%) over 444bp for offset 0 <== THIS IS REAL YBR109C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR109C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/183 (0.0%). Conflicting: 0/183 (0.0%). NoInfo: 0/183 (0.0%). Certain keep: 183/183 (100.0%) ########################## YBR110W (1350bp = 450AA) has 9 hits (ALG1) beta-1,4-mannosyltransferase Spar (test2) orthologous hit at 89% f1350/1350 (100.0%) over 1350bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1350/1350 (100.0%) over 1350bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1344/1349 (99.6%) over 1350bp for offset 0 <== THIS IS REAL YBR110W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR110W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/184 (0.0%). Conflicting: 0/184 (0.0%). NoInfo: 0/184 (0.0%). Certain keep: 184/184 (100.0%) ########################## YBR111C (696bp = 232AA) has 6 hits (YSA1) Homolog to serendipity protein (D. melanogaster) Spar (test2) orthologous hit at 90% f696/696 (100.0%) over 696bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f392/392 (100.0%) over 392bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f686/686 (100.0%) over 686bp for offset 0 <== THIS IS REAL YBR111C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR111C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/185 (0.0%). Conflicting: 0/185 (0.0%). NoInfo: 0/185 (0.0%). Certain keep: 185/185 (100.0%) ########################## YBR112C (2901bp = 967AA) has 1878 hits (CYC8) Transcription regulatory protein Flanking ORFs are: YBR110W and YBR112C. YBR112C skipped ########################## YBR114W (2373bp = 791AA) has 68 hits (RAD16) Radiation repair protein, putative ..A helicase (92) Spar (test2) non-orthologous hit at 91% f2359/2368 (99.6%) over 2373bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2157/2323 (92.9%) over 2343bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2340/2366 (98.9%) over 2373bp for offset 0 <== THIS IS REAL YBR114W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR114W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/186 (0.0%). Conflicting: 0/186 (0.0%). NoInfo: 0/186 (0.0%). Certain keep: 186/186 (100.0%) ########################## YBR115C (4179bp = 1393AA) has 9 hits (LYS2) alpha aminoadipate reductase Spar (test2) orthologous hit at 91% f3519/3527 (99.8%) over 3528bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f4134/4178 (98.9%) over 4179bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f470/530 (88.7%) over 530bp for offset 1 Sbay (test3) Longest island has f100 at 84% over 470bp <== THIS IS REAL 0 10203040506007080901k1k1k1k 1k1k1k1k1k1k 2k2k2k2k2k2k2k 2k2k2k3k3k3k 3k3k3k3k3k3k3k 4k4k4k |_|_|_|_|_|_|__|_|_|_|_|_|_|__|_|_|_|_|_|__|_|_|_|_|_|_|__|_|_|_|_|_|__|_|_|_|_|_|_|__|_|_| 100f 84% 47Sb8brk ||oooooooooo| YBR115C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR115C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/187 (0.0%). Conflicting: 0/187 (0.0%). NoInfo: 0/187 (0.0%). Certain keep: 187/187 (100.0%) ########################## YBR117C (2046bp = 682AA) has 9 hits (TKL2) transketolase, homologous to tkl1 Flanking ORFs are: YBR114W and YBR116C. YBR117C skipped ########################## YBR118W (1377bp = 459AA) has 22 hits (TEF2) translational elongation factor EF-1 alpha Spar (test2) orthologous hit at 98% f549/549 (100.0%) over 549bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 98% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 96% f1370/1376 (99.6%) over 1377bp for offset 0 <== THIS IS REAL YBR118W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR118W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/188 (0.0%). Conflicting: 0/188 (0.0%). NoInfo: 0/188 (0.0%). Certain keep: 188/188 (100.0%) ########################## YBR120C (489bp = 163AA) has 16 hits (CBP6) Translational activator of COB mRNA Spar (test2) orthologous hit at 91% f489/489 (100.0%) over 489bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f488/488 (100.0%) over 488bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f488/488 (100.0%) over 488bp for offset 0 <== THIS IS REAL YBR120C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR120C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/189 (0.0%). Conflicting: 0/189 (0.0%). NoInfo: 0/189 (0.0%). Certain keep: 189/189 (100.0%) ########################## YBR121C (2004bp = 668AA) has 17 hits (GRS1) Glycyl-tRNA synthase Spar (test2) orthologous hit at 93% f1993/2002 (99.6%) over 2004bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1990/1994 (99.8%) over 1995bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1988/2001 (99.4%) over 2004bp for offset 0 <== THIS IS REAL YBR121C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR121C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/190 (0.0%). Conflicting: 0/190 (0.0%). NoInfo: 0/190 (0.0%). Certain keep: 190/190 (100.0%) ########################## YBR122C (591bp = 197AA) has 8 hits (MRPL36) Mitochondrial ribosomal protein MRPL36 (YmL36) Spar (test2) orthologous hit at 86% f574/590 (97.3%) over 591bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f542/584 (92.8%) over 589bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f527/569 (92.6%) over 573bp for offset 2 <== THIS IS REAL YBR122C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR122C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/191 (0.0%). Conflicting: 0/191 (0.0%). NoInfo: 0/191 (0.0%). Certain keep: 191/191 (100.0%) ########################## YBR123C (1950bp = 650AA) has 38 hits (TFC1) transcription factor tau (TFIIIC) subunit 95 Flanking ORFs are: YBR121C and YBR123C. YBR123C skipped ########################## YBR125C (1182bp = 394AA) has 10 hits (PTC4) Type 2C protein phosphatase Spar (test2) orthologous hit at 92% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL YBR125C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR125C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/192 (0.0%). Conflicting: 0/192 (0.0%). NoInfo: 0/192 (0.0%). Certain keep: 192/192 (100.0%) ########################## YBR126C (1488bp = 496AA) has 12 hits (TPS1) 56 kD synthase subunit of trehalose-..se complex (120) Spar (test2) orthologous hit at 92% f1488/1488 (100.0%) over 1488bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1488/1488 (100.0%) over 1488bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1488/1488 (100.0%) over 1488bp for offset 0 <== THIS IS REAL YBR126C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR126C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/193 (0.0%). Conflicting: 0/193 (0.0%). NoInfo: 0/193 (0.0%). Certain keep: 193/193 (100.0%) ########################## YBR127C (1554bp = 518AA) has 8 hits (VMA2) vacuolar ATPase V1 domain subunit B (60 kDa) Spar (test2) orthologous hit at 95% f1554/1554 (100.0%) over 1554bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f1551/1551 (100.0%) over 1554bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f1529/1541 (99.2%) over 1541bp for offset 0 <== THIS IS REAL YBR127C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR127C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/194 (0.0%). Conflicting: 0/194 (0.0%). NoInfo: 0/194 (0.0%). Certain keep: 194/194 (100.0%) ########################## YBR128C (1035bp = 345AA) has 15 hits (APG14) involved in autophagy Spar (test2) orthologous hit at 89% f1030/1034 (99.6%) over 1035bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1035/1035 (100.0%) over 1035bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1022/1031 (99.1%) over 1034bp for offset 0 <== THIS IS REAL YBR128C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR128C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/195 (0.0%). Conflicting: 0/195 (0.0%). NoInfo: 0/195 (0.0%). Certain keep: 195/195 (100.0%) ########################## YBR129C (987bp = 329AA) has 33 hits (OPY1) involved in mating pathway Spar (test2) orthologous hit at 91% f958/986 (97.2%) over 986bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 84% f960/981 (97.9%) over 987bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f962/975 (98.7%) over 977bp for offset 0 <== THIS IS REAL YBR129C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR129C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/196 (0.0%). Conflicting: 0/196 (0.0%). NoInfo: 0/196 (0.0%). Certain keep: 196/196 (100.0%) ########################## YBR130C (1278bp = 426AA) has 70 hits (SHE3) involved in cell polarity Spar (test2) orthologous hit at 90% f1277/1277 (100.0%) over 1277bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1268/1275 (99.5%) over 1277bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1268/1274 (99.5%) over 1276bp for offset 0 <== THIS IS REAL YBR130C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR130C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/197 (0.0%). Conflicting: 0/197 (0.0%). NoInfo: 0/197 (0.0%). Certain keep: 197/197 (100.0%) ########################## YBR131W (2115bp = 705AA) has 16 hits (CCZ1) involved in sporulation, caffeine, c..ensitivity (108) Spar (test2) orthologous hit at 86% f2109/2114 (99.8%) over 2115bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2089/2108 (99.1%) over 2115bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1212/1268 (95.6%) over 1277bp for offset 0 <== THIS IS REAL YBR131W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR131W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/198 (0.0%). Conflicting: 0/198 (0.0%). NoInfo: 0/198 (0.0%). Certain keep: 198/198 (100.0%) ########################## YBR132C (1791bp = 597AA) has 20 hits (AGP2) Amino acid permease Spar (test2) orthologous hit at 91% f1791/1791 (100.0%) over 1791bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1787/1790 (99.8%) over 1791bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1766/1781 (99.2%) over 1789bp for offset 2 <== THIS IS REAL YBR132C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR132C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/199 (0.0%). Conflicting: 0/199 (0.0%). NoInfo: 0/199 (0.0%). Certain keep: 199/199 (100.0%) ########################## YBR133C (2484bp = 828AA) has 9 hits (HSL7) regulator of Swe1p kinase Flanking ORFs are: YBR131W and YBR133C. YBR133C skipped ########################## YBR135W (453bp = 151AA) has 778 hits (CKS1) subunit of the Cdc28 protein kinase Spar (test2) orthologous hit at 88% f401/422 (95.0%) over 422bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f418/422 (99.1%) over 423bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f391/411 (95.1%) over 411bp for offset 0 <== THIS IS REAL YBR135W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR135W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/200 (0.0%). Conflicting: 0/200 (0.0%). NoInfo: 0/200 (0.0%). Certain keep: 200/200 (100.0%) ########################## YBR136W (7107bp = 2369AA) has 36 hits (MEC1) similar to phosphatidylinositol(PI)..in mitosis (183) Spar (test2) orthologous hit at 90% f5415/5422 (99.9%) over 5423bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f5406/5507 (98.2%) over 5512bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f3032/3693 (82.1%) over 3695bp for offset 0 Sbay (test3) Longest island has f100 at 84% over 3037bp <== THIS IS REAL 01230456708911k1111k111k1222k2222k2223k333k3333k3344k4444k444k4555k5555k5556k666k6666k66777k ||||_||||_||||_||||_|||_||||_||||_||||_|||_||||_||||_||||_|||_||||_||||_||||_|||_||||_||||| 100f 81%100f 84% 3037bp Sb7brk |=======|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | YBR136W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR136W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/201 (0.0%). Conflicting: 0/201 (0.0%). NoInfo: 0/201 (0.0%). Certain keep: 201/201 (100.0%) ########################## YBR138C (1575bp = 525AA) has 33 hits (HDR1) Unknown Spar (test2) orthologous hit at 89% f1575/1575 (100.0%) over 1575bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1560/1572 (99.2%) over 1575bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1248/1253 (99.6%) over 1254bp for offset 0 <== THIS IS REAL YBR138C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR138C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/202 (0.0%). Conflicting: 0/202 (0.0%). NoInfo: 0/202 (0.0%). Certain keep: 202/202 (100.0%) ########################## YBR140C (9279bp = 3093AA) has 63 hits (IRA1) GTPase activating protein Spar (test2) orthologous hit at 89% f4670/6683 (69.9%) over 6683bp for offset 0 Spar (test3) Longest island has f100 at 90% over 4670bp <== THIS IS REAL Smik (test2) orthologous hit at 85% f6096/6102 (99.9%) over 6104bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f5419/5725 (94.7%) over 5762bp for offset 1 <== THIS IS REAL 1234567891111111111222222222233333333344444444445555555555666666666777777777788888888889999k ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 100f 89% 2013bp 100f 90% 4670bp Sp206brk |==================|ooooooooooooooooooooooooooooooooooooooooooooo| YBR140C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR140C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/203 (0.0%). Conflicting: 0/203 (0.0%). NoInfo: 0/203 (0.0%). Certain keep: 203/203 (100.0%) ########################## YBR142W (2322bp = 774AA) has 77 hits (MAK5) Probable pre-mRNA splicing RNA-helicase Spar (test2) orthologous hit at 78% f1010/1199 (84.2%) over 1217bp for offset 2 Spar (test3) Longest island has f100 at 90% over 866bp <== THIS IS REAL Smik (test2) orthologous hit at 80% f1990/2225 (89.4%) over 2249bp for offset 0 Smik (test3) Longest island has f98 at 85% over 1911bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2052/2203 (93.1%) over 2226bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 22k |__|___|___|___|___|___|___|___|__|___|___|___|___|___|___|___|__|___|___|___|___|___|___|| 100f 90% 866bp Sp207brk |..............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | 98f 85% 1911bp Sm95full |..............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YBR142W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR142W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/204 (0.0%). Conflicting: 0/204 (0.0%). NoInfo: 0/204 (0.0%). Certain keep: 204/204 (100.0%) ########################## YBR143C (1314bp = 438AA) has 9 hits (SUP45) Homolog of eRF1 (eukaryotic Release ..metazoans. (109) Spar (test2) non-orthologous hit at 92% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1313/1313 (100.0%) over 1313bp for offset 0 <== THIS IS REAL YBR143C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR143C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/205 (0.0%). Conflicting: 0/205 (0.0%). NoInfo: 0/205 (0.0%). Certain keep: 205/205 (100.0%) ########################## YBR145W (1056bp = 352AA) has 23 hits (ADH5) alcohol dehydrogenase isoenzyme V Spar (test2) orthologous hit at 89% f1056/1056 (100.0%) over 1056bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1056/1056 (100.0%) over 1056bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1050/1055 (99.5%) over 1056bp for offset 0 <== THIS IS REAL YBR145W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR145W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/206 (0.0%). Conflicting: 0/206 (0.0%). NoInfo: 0/206 (0.0%). Certain keep: 206/206 (100.0%) ########################## YBR146W (837bp = 279AA) has 10 hits (MRPS9) Probable mitochondrial ribosomal protein S9 Spar (test2) orthologous hit at 91% f837/837 (100.0%) over 837bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f831/836 (99.4%) over 837bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f830/836 (99.3%) over 837bp for offset 0 <== THIS IS REAL YBR146W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR146W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/207 (0.0%). Conflicting: 0/207 (0.0%). NoInfo: 0/207 (0.0%). Certain keep: 207/207 (100.0%) ########################## YBR148W (1830bp = 610AA) has 88 hits (YSW1) Spore-specific protein Spar (test2) orthologous hit at 81% f1564/1670 (93.7%) over 1685bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f1377/1456 (94.6%) over 1468bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1329/1447 (91.8%) over 1466bp for offset 0 <== THIS IS REAL YBR148W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR148W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/208 (0.0%). Conflicting: 0/208 (0.0%). NoInfo: 0/208 (0.0%). Certain keep: 208/208 (100.0%) ########################## YBR149W (1035bp = 345AA) has 15 hits (ARA1) D-arabinose dehydrogenase Spar (test2) orthologous hit at 92% f1035/1035 (100.0%) over 1035bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1031/1034 (99.7%) over 1035bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1034/1034 (100.0%) over 1034bp for offset 0 <== THIS IS REAL YBR149W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR149W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/209 (0.0%). Conflicting: 0/209 (0.0%). NoInfo: 0/209 (0.0%). Certain keep: 209/209 (100.0%) ########################## YBR150C (3285bp = 1095AA) has 1307 hits (TBS1) Probable Zn-finger protein Spar (test2) orthologous hit at 84% f3035/3196 (95.0%) over 3209bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2383/2418 (98.6%) over 2424bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f2921/3080 (94.8%) over 3105bp for offset 0 <== THIS IS REAL YBR150C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR150C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/210 (0.0%). Conflicting: 0/210 (0.0%). NoInfo: 0/210 (0.0%). Certain keep: 210/210 (100.0%) ########################## YBR151W (951bp = 317AA) has 6 hits (APD1) Actin Patches Distal Spar (test2) orthologous hit at 89% f948/950 (99.8%) over 951bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f940/948 (99.2%) over 951bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f931/947 (98.3%) over 951bp for offset 0 <== THIS IS REAL YBR151W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR151W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/211 (0.0%). Conflicting: 0/211 (0.0%). NoInfo: 0/211 (0.0%). Certain keep: 211/211 (100.0%) ########################## YBR152W (876bp = 292AA) has 41 hits (SPP381) U4/U6.U5-associated snRNP protein; ..ysis motif (113) Spar (test2) orthologous hit at 84% f309/309 (100.0%) over 309bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f664/730 (91.0%) over 736bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 64% f680/832 (81.7%) over 852bp for offset 0 Sbay (test3) Longest island has f90 at 68% over 677bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 876 |_________|_________|_________|__________|_________|_________|_________|__________|_______| 90f 68% 677bp Sb5full |....................|==================================================================|=> YBR152W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR152W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/212 (0.0%). Conflicting: 0/212 (0.0%). NoInfo: 0/212 (0.0%). Certain keep: 212/212 (100.0%) ########################## YBR153W (735bp = 245AA) has 7 hits (RIB7) Riboflavin biosynthesis protein Spar (test2) orthologous hit at 84% f79/79 (100.0%) over 79bp for offset 0 Spar (test3) Longest island has f100 at 85% over 79bp Smik (test2) orthologous hit at 81% f730/734 (99.5%) over 735bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f720/732 (98.4%) over 734bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 735 |___________|___________|___________|___________|____________|___________|___________|____| 100f 85% 7Sp209brk |========>| YBR153W: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YBR153W - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 0/213 (0.0%). Conflicting: 0/213 (0.0%). NoInfo: 0/213 (0.0%). Certain keep: 213/213 (100.0%) ########################## YBR154C (648bp = 216AA) has 9 hits (RPB5) 25-kDa RNA polymerase subunit (common ..I and III) (109) Spar (test2) orthologous hit at 94% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL YBR154C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR154C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/214 (0.0%). Conflicting: 0/214 (0.0%). NoInfo: 0/214 (0.0%). Certain keep: 214/214 (100.0%) ########################## YBR155W (1158bp = 386AA) has 27 hits (CNS1) component of Hsp90p chaperone machinery Spar (test2) orthologous hit at 89% f1158/1158 (100.0%) over 1158bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1150/1156 (99.5%) over 1158bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1148/1156 (99.3%) over 1158bp for offset 0 <== THIS IS REAL YBR155W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR155W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/215 (0.0%). Conflicting: 0/215 (0.0%). NoInfo: 0/215 (0.0%). Certain keep: 215/215 (100.0%) ########################## YBR156C (2097bp = 699AA) has 20 hits (SLI15) Mitotic spindle protein involved in..gregation. (104) Spar (test2) orthologous hit at 87% f2097/2097 (100.0%) over 2097bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2044/2089 (97.8%) over 2097bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1392/1451 (95.9%) over 1461bp for offset 0 <== THIS IS REAL YBR156C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR156C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/216 (0.0%). Conflicting: 0/216 (0.0%). NoInfo: 0/216 (0.0%). Certain keep: 216/216 (100.0%) ########################## YBR157C (321bp = 107AA) has 4 hits (ICS2) Increased Copper Sensitivity Spar (test2) orthologous hit at 90% f268/321 (83.5%) over 321bp for offset 1 Spar (test3) Longest island has f100 at 91% over 268bp <== THIS IS REAL Smik (test2) orthologous hit at 85% f268/321 (83.5%) over 321bp for offset 0 Smik (test3) Longest island has f100 at 86% over 268bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f275/320 (85.9%) over 321bp for offset 0 Sbay (test3) Longest island has f100 at 82% over 270bp <== THIS IS REAL 0 100 200 300 321 |___________________________|___________________________|___________________________|_____| 100f 91% 268bp Sp209full |==========================================================================>..............| 100f 86% 268bp Sm97full |==========================================================================>..............| 100f 82% 270bp Sb5full |==========================================================================>..............| YBR157C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR157C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/217 (0.0%). Conflicting: 0/217 (0.0%). NoInfo: 0/217 (0.0%). Certain keep: 217/217 (100.0%) ########################## YBR158W (1650bp = 550AA) has 5 hits (CST13) Chromosome STability Spar (test2) orthologous hit at 89% f1640/1649 (99.5%) over 1650bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1621/1640 (98.8%) over 1643bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1633/1639 (99.6%) over 1640bp for offset 0 <== THIS IS REAL YBR158W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR158W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/218 (0.0%). Conflicting: 0/218 (0.0%). NoInfo: 0/218 (0.0%). Certain keep: 218/218 (100.0%) ########################## YBR160W (897bp = 299AA) has 57 hits (CDC28) Spar (test2) orthologous hit at 92% f897/897 (100.0%) over 897bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f764/764 (100.0%) over 764bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f295/318 (92.8%) over 319bp for offset 2 <== THIS IS REAL YBR160W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR160W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/219 (0.0%). Conflicting: 0/219 (0.0%). NoInfo: 0/219 (0.0%). Certain keep: 219/219 (100.0%) ########################## YBR162C (1368bp = 456AA) has 29 hits (TOS1) Hypothetical ORF Spar (test2) orthologous hit at 91% f1008/1025 (98.3%) over 1027bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f898/1024 (87.7%) over 1044bp for offset 0 Smik (test3) Longest island has f99 at 87% over 805bp <== THIS IS REAL Sbay (test2) orthologous hit at 83% f769/784 (98.1%) over 788bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|_____|______|______|_____|______|_____|______|_____|______|____| 99f 87% 805bp Sm98full |................|===================================================| YBR162C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR162C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/220 (0.0%). Conflicting: 0/220 (0.0%). NoInfo: 0/220 (0.0%). Certain keep: 220/220 (100.0%) ########################## YBR162W-A (198bp = 66AA) has 45 hits (YSY6) involved in the secretory pathway Spar (test2) orthologous hit at 92% f198/198 (100.0%) over 198bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f198/198 (100.0%) over 198bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f196/198 (99.0%) over 198bp for offset 0 <== THIS IS REAL YBR162W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR162W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/221 (0.0%). Conflicting: 0/221 (0.0%). NoInfo: 0/221 (0.0%). Certain keep: 221/221 (100.0%) ########################## YBR163W (1758bp = 586AA) has 6 hits (DEM1) Weak similarity to Pta1p (pre-tRNA pr..g protein) (97) Spar (test2) orthologous hit at 86% f1757/1757 (100.0%) over 1757bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1713/1749 (97.9%) over 1756bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1711/1750 (97.8%) over 1757bp for offset 0 <== THIS IS REAL YBR163W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR163W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/222 (0.0%). Conflicting: 0/222 (0.0%). NoInfo: 0/222 (0.0%). Certain keep: 222/222 (100.0%) ########################## YBR164C (552bp = 184AA) has 15 hits (ARL1) ADP-ribosylation factor-like protein 1 Spar (test2) orthologous hit at 93% f552/552 (100.0%) over 552bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f551/551 (100.0%) over 551bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f551/551 (100.0%) over 551bp for offset 0 <== THIS IS REAL YBR164C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR164C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/223 (0.0%). Conflicting: 0/223 (0.0%). NoInfo: 0/223 (0.0%). Certain keep: 223/223 (100.0%) ########################## YBR165W (834bp = 278AA) has 4 hits (UBS1) positive regulator of CDC34, involved ..egradation (113) Spar (test2) orthologous hit at 88% f834/834 (100.0%) over 834bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f834/834 (100.0%) over 834bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f820/830 (98.8%) over 834bp for offset 0 <== THIS IS REAL YBR165W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR165W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/224 (0.0%). Conflicting: 0/224 (0.0%). NoInfo: 0/224 (0.0%). Certain keep: 224/224 (100.0%) ########################## YBR166C (1359bp = 453AA) has 8 hits (TYR1) Prephenate dehydrogenase (NADP+) Spar (test2) orthologous hit at 90% f1359/1359 (100.0%) over 1359bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1339/1355 (98.8%) over 1356bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1308/1351 (96.8%) over 1358bp for offset 0 <== THIS IS REAL YBR166C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR166C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/225 (0.0%). Conflicting: 0/225 (0.0%). NoInfo: 0/225 (0.0%). Certain keep: 225/225 (100.0%) ########################## YBR167C (423bp = 141AA) has 9 hits (POP7) Pop7 protein, an integral subunit of R.. RNase MRP (120) Spar (test2) orthologous hit at 86% f416/421 (98.8%) over 422bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f417/421 (99.0%) over 422bp for offset 0 <== THIS IS REAL YBR167C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR167C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/226 (0.0%). Conflicting: 0/226 (0.0%). NoInfo: 0/226 (0.0%). Certain keep: 226/226 (100.0%) ########################## YBR169C (2082bp = 694AA) has 22 hits (SSE2) HSP70 family member, highly homologo..s to Sse1p (91) Spar (test2) orthologous hit at 88% f2076/2081 (99.8%) over 2082bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2078/2081 (99.9%) over 2082bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2069/2077 (99.6%) over 2082bp for offset 0 <== THIS IS REAL YBR169C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR169C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/227 (0.0%). Conflicting: 0/227 (0.0%). NoInfo: 0/227 (0.0%). Certain keep: 227/227 (100.0%) ########################## YBR170C (1743bp = 581AA) has 6 hits (NPL4) Suppressor of SEC63 (S.cerevisiae), n.. component (111) Spar (test2) orthologous hit at 89% f1742/1742 (100.0%) over 1742bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1738/1741 (99.8%) over 1742bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1706/1737 (98.2%) over 1742bp for offset 0 <== THIS IS REAL YBR170C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR170C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/228 (0.0%). Conflicting: 0/228 (0.0%). NoInfo: 0/228 (0.0%). Certain keep: 228/228 (100.0%) ########################## YBR171W (621bp = 207AA) has 12 hits (SEC66) glycoprotein complexed with Sec62p a..y proteins (222) Spar (test2) orthologous hit at 90% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL YBR171W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR171W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/229 (0.0%). Conflicting: 0/229 (0.0%). NoInfo: 0/229 (0.0%). Certain keep: 229/229 (100.0%) ########################## YBR172C (2373bp = 791AA) has 109 hits (SMY2) Kinesin-related protein suppressing..cts (MYO2) (102) Spar (test2) orthologous hit at 82% f1308/1488 (87.9%) over 1498bp for offset 1 Spar (test3) Longest island has f97 at 84% over 1325bp <== THIS IS REAL Smik (test2) orthologous hit at 77% f2285/2358 (96.9%) over 2373bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1118/1200 (93.2%) over 1220bp for offset 0 <== THIS IS REAL 0 100 200 300 400500 600 700 800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k |__|___|___|___|__|___|___|___|___|__|___|___|___|___|__|___|___|___|___|__|___|___|___|__| 97f 84% 1325bp Sp210full |...|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.> | YBR172C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR172C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/230 (0.0%). Conflicting: 0/230 (0.0%). NoInfo: 0/230 (0.0%). Certain keep: 230/230 (100.0%) ########################## YBR173C (447bp = 149AA) has 3 hits (UMP1) 20S proteasome maturation factor Spar (test2) orthologous hit at 92% f447/447 (100.0%) over 447bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f446/446 (100.0%) over 446bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f447/447 (100.0%) over 447bp for offset 0 <== THIS IS REAL YBR173C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR173C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/231 (0.0%). Conflicting: 0/231 (0.0%). NoInfo: 0/231 (0.0%). Certain keep: 231/231 (100.0%) ########################## YBR175W (948bp = 316AA) has 4 hits (SWD3) YBR175W Flanking ORFs are: YBR172C and YBR174C. YBR175W skipped ########################## YBR176W (939bp = 313AA) has 5 hits (ECM31) Alpha-Ketoisovalerate Hydroxymethyltransferase Spar (test2) orthologous hit at 89% f935/938 (99.7%) over 939bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f938/938 (100.0%) over 938bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f939/939 (100.0%) over 939bp for offset 0 <== THIS IS REAL YBR176W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR176W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/232 (0.0%). Conflicting: 0/232 (0.0%). NoInfo: 0/232 (0.0%). Certain keep: 232/232 (100.0%) ########################## YBR177C (1356bp = 452AA) has 13 hits (EHT1) alcohol acyl transferase Flanking ORFs are: YBR175W and YBR177C. YBR177C skipped ########################## YBR179C (2568bp = 856AA) has 14 hits (FZO1) homolog of Drosophila melanogaster f..ht complex (215) Spar (test2) orthologous hit at 89% f2568/2568 (100.0%) over 2568bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2556/2566 (99.6%) over 2568bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2541/2562 (99.2%) over 2567bp for offset 0 <== THIS IS REAL YBR179C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR179C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/233 (0.0%). Conflicting: 0/233 (0.0%). NoInfo: 0/233 (0.0%). Certain keep: 233/233 (100.0%) ########################## YBR180W (1719bp = 573AA) has 12 hits (DTR1) dityrosine transporter MFS-MDR Spar (test2) orthologous hit at 88% f1704/1717 (99.2%) over 1719bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1695/1715 (98.8%) over 1719bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1676/1713 (97.8%) over 1719bp for offset 0 <== THIS IS REAL YBR180W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR180W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/234 (0.0%). Conflicting: 0/234 (0.0%). NoInfo: 0/234 (0.0%). Certain keep: 234/234 (100.0%) ########################## YBR182C (1359bp = 453AA) has 7 hits (SMP1) Probable DNA-binding transcription fa..o SRF/SL-2 (105) Spar (test2) orthologous hit at 85% f1347/1358 (99.2%) over 1359bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f941/971 (96.9%) over 978bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f1264/1343 (94.1%) over 1358bp for offset 0 <== THIS IS REAL YBR182C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR182C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/235 (0.0%). Conflicting: 0/235 (0.0%). NoInfo: 0/235 (0.0%). Certain keep: 235/235 (100.0%) ########################## YBR183W (951bp = 317AA) has 9 hits (YPC1) alkaline ceramidase with reverse activity Spar (test2) orthologous hit at 90% f951/951 (100.0%) over 951bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f942/948 (99.4%) over 950bp for offset 0 <== THIS IS REAL YBR183W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR183W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/236 (0.0%). Conflicting: 0/236 (0.0%). NoInfo: 0/236 (0.0%). Certain keep: 236/236 (100.0%) ########################## YBR185C (837bp = 279AA) has 7 hits (MBA1) involved in assembly of mitochondrial .. complexes (101) Spar (test2) orthologous hit at 91% f837/837 (100.0%) over 837bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f837/837 (100.0%) over 837bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f836/836 (100.0%) over 836bp for offset 0 <== THIS IS REAL YBR185C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR185C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 0/237 (0.0%). Conflicting: 0/237 (0.0%). NoInfo: 0/237 (0.0%). Certain keep: 237/237 (100.0%) ########################## YBR188C (423bp = 141AA) has 7 hits (NTC20) splicing factor Spar (test2) orthologous hit at 78% f402/419 (95.9%) over 423bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 68% f233/262 (88.9%) over 270bp for offset 2 Smik (test3) Longest island has f90 at 70% over 205bp Smik (test2) orthologous hit at 69% f107/107 (100.0%) over 107bp for offset 0 Smik (test3) Longest island has f100 at 69% over 107bp Sbay (test2) non-orthologous hit at 70% f142/148 (95.9%) over 150bp for offset 0 Sbay (test3) Longest island has f97 at 70% over 147bp Sbay (test2) non-orthologous hit at 63% f109/140 (77.9%) over 144bp for offset 0 Sbay (test3) Longest island has f94 at 70% over 96bp 0 100 200 300 400 423 |____________________|____________________|____________________|_____________________|____| 90f 70% 205bp Sm101full |..............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 100f 69% 107bp Sm101full |=====================> | 97f 70% 147bp Sb1full |==============================>| 94f 70% 96bp 100f 100f 68% 19bp Sb1full |===================>.|ooo>|===> | YBR188C: kill: Smik Smik - keep: Spar YBR188C - Certain Kill. Kill (Smik) and Keep (Spar) Current total: Certain kills: 1/238 (0.4%). Conflicting: 0/238 (0.0%). NoInfo: 0/238 (0.0%). Certain keep: 237/238 (99.6%) ########################## YBR192W (1134bp = 378AA) has 9 hits (RIM2) Probable carrier protein, mitochondrial Spar (test2) orthologous hit at 92% f1133/1133 (100.0%) over 1133bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1120/1131 (99.0%) over 1133bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1128/1131 (99.7%) over 1132bp for offset 0 <== THIS IS REAL YBR192W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR192W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/239 (0.4%). Conflicting: 0/239 (0.0%). NoInfo: 0/239 (0.0%). Certain keep: 238/239 (99.6%) ########################## YBR193C (672bp = 224AA) has 9 hits (MED8) Stoichiometric member of mediator complex Spar (test2) orthologous hit at 90% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f665/671 (99.1%) over 672bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f664/670 (99.1%) over 672bp for offset 0 <== THIS IS REAL YBR193C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR193C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/240 (0.4%). Conflicting: 0/240 (0.0%). NoInfo: 0/240 (0.0%). Certain keep: 239/240 (99.6%) ########################## YBR195C (1269bp = 423AA) has 6 hits (MSI1) p50 subunit of the yeast Chromatin As..g proteins (205) Spar (test2) orthologous hit at 90% f1269/1269 (100.0%) over 1269bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1263/1268 (99.6%) over 1269bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1239/1258 (98.5%) over 1261bp for offset 0 <== THIS IS REAL YBR195C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR195C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/241 (0.4%). Conflicting: 0/241 (0.0%). NoInfo: 0/241 (0.0%). Certain keep: 240/241 (99.6%) ########################## YBR196C (1665bp = 555AA) has 9 hits (PGI1) Glucose-6-phosphate isomerase Spar (test2) orthologous hit at 94% f1665/1665 (100.0%) over 1665bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1665/1665 (100.0%) over 1665bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f1662/1664 (99.9%) over 1665bp for offset 0 <== THIS IS REAL YBR196C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR196C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/242 (0.4%). Conflicting: 0/242 (0.0%). NoInfo: 0/242 (0.0%). Certain keep: 241/242 (99.6%) ########################## YBR198C (2397bp = 799AA) has 23 hits (TAF5) Probable transcription-associated fa..ducin type (119) Spar (test2) orthologous hit at 91% f2397/2397 (100.0%) over 2397bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2376/2393 (99.3%) over 2396bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1525/1534 (99.4%) over 1541bp for offset 0 <== THIS IS REAL YBR198C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR198C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/243 (0.4%). Conflicting: 0/243 (0.0%). NoInfo: 0/243 (0.0%). Certain keep: 242/243 (99.6%) ########################## YBR199W (1395bp = 465AA) has 44 hits (KTR4) Putative alpha-1,2-mannosyltransferase Spar (test2) orthologous hit at 87% f1395/1395 (100.0%) over 1395bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1230/1243 (99.0%) over 1249bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1346/1387 (97.0%) over 1395bp for offset 0 <== THIS IS REAL YBR199W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR199W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/244 (0.4%). Conflicting: 0/244 (0.0%). NoInfo: 0/244 (0.0%). Certain keep: 243/244 (99.6%) ########################## YBR200W (1656bp = 552AA) has 10 hits (BEM1) contains two SH3 domains Spar (test2) orthologous hit at 93% f1652/1652 (100.0%) over 1652bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1653/1653 (100.0%) over 1653bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1656/1656 (100.0%) over 1656bp for offset 0 <== THIS IS REAL YBR200W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR200W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/245 (0.4%). Conflicting: 0/245 (0.0%). NoInfo: 0/245 (0.0%). Certain keep: 244/245 (99.6%) ########################## YBR201W (636bp = 212AA) has 10 hits (DER1) involved in degradation in the ER Spar (test2) orthologous hit at 88% f636/636 (100.0%) over 636bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f636/636 (100.0%) over 636bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f519/519 (100.0%) over 519bp for offset 0 <== THIS IS REAL YBR201W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR201W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/246 (0.4%). Conflicting: 0/246 (0.0%). NoInfo: 0/246 (0.0%). Certain keep: 245/246 (99.6%) ########################## YBR202W (2538bp = 846AA) has 27 hits (CDC47) MCM3 protein homolog (S. cerevisiae) Spar (test2) orthologous hit at 91% f2538/2538 (100.0%) over 2538bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2534/2537 (99.9%) over 2538bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2523/2535 (99.5%) over 2538bp for offset 0 <== THIS IS REAL YBR202W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR202W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/247 (0.4%). Conflicting: 0/247 (0.0%). NoInfo: 0/247 (0.0%). Certain keep: 246/247 (99.6%) ########################## YBR205W (1215bp = 405AA) has 40 hits (KTR3) Putative alpha-1,2-mannosyltransferase Flanking ORFs are: YBR201W and YBR203W. YBR205W skipped ########################## YBR207W (1398bp = 466AA) has 10 hits (FTH1) probable membrane protein Spar (test2) orthologous hit at 90% f1390/1397 (99.5%) over 1398bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1358/1371 (99.1%) over 1379bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1368/1391 (98.3%) over 1398bp for offset 0 <== THIS IS REAL YBR207W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR207W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/248 (0.4%). Conflicting: 0/248 (0.0%). NoInfo: 0/248 (0.0%). Certain keep: 247/248 (99.6%) ########################## YBR208C (5508bp = 1836AA) has 23 hits (DUR1,2) Urea amidolyase (contains urea ca..hydrolase) (116) Spar (test2) orthologous hit at 90% f5505/5505 (100.0%) over 5508bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f2718/2738 (99.3%) over 2740bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f5440/5493 (99.0%) over 5502bp for offset 0 <== THIS IS REAL YBR208C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR208C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/249 (0.4%). Conflicting: 0/249 (0.0%). NoInfo: 0/249 (0.0%). Certain keep: 248/249 (99.6%) ########################## YBR211C (975bp = 325AA) has 20 hits (AME1) regulator of microtubule stability Spar (test2) orthologous hit at 89% f448/448 (100.0%) over 448bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f956/972 (98.4%) over 975bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f946/969 (97.6%) over 974bp for offset 0 <== THIS IS REAL YBR211C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR211C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/250 (0.4%). Conflicting: 0/250 (0.0%). NoInfo: 0/250 (0.0%). Certain keep: 249/250 (99.6%) ########################## YBR212W (2019bp = 673AA) has 416 hits (NGR1) negative growth regulatory protein Spar (test2) orthologous hit at 72% f805/1103 (73.0%) over 1127bp for offset 0 Spar (test3) Longest island has f99 at 87% over 651bp <== THIS IS REAL Smik (test2) orthologous hit at 75% f1739/1958 (88.8%) over 1990bp for offset 0 Smik (test3) Longest island has f100 at 84% over 1473bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1022/1099 (93.0%) over 1111bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 22k |___|___|____|___|____|___|____|___|____|___|____|___|___|____|___|____|___|____|___|____|| 99f 87% 651bp Sp212full |.....|============================>...............> | 100f 84% 1473bp Sm388full |================================================================>......................> | YBR212W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR212W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/251 (0.4%). Conflicting: 0/251 (0.0%). NoInfo: 0/251 (0.0%). Certain keep: 250/251 (99.6%) ########################## YBR213W (825bp = 275AA) has 4 hits (MET8) Effector in the expression of PAPS red.. reductase (108) Spar (test2) orthologous hit at 90% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f821/824 (99.6%) over 825bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f818/823 (99.4%) over 825bp for offset 0 <== THIS IS REAL YBR213W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR213W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/252 (0.4%). Conflicting: 0/252 (0.0%). NoInfo: 0/252 (0.0%). Certain keep: 251/252 (99.6%) ########################## YBR214W (1584bp = 528AA) has 11 hits (SDS24) nuclear protein similar to pombe sds23 Spar (test2) orthologous hit at 90% f1583/1584 (99.9%) over 1584bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1511/1583 (95.5%) over 1584bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1572/1580 (99.5%) over 1584bp for offset 0 <== THIS IS REAL YBR214W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR214W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/253 (0.4%). Conflicting: 0/253 (0.0%). NoInfo: 0/253 (0.0%). Certain keep: 252/253 (99.6%) ########################## YBR215W (1872bp = 624AA) has 60 hits (HPC2) highly charged, basic protein Spar (test2) orthologous hit at 86% f1865/1868 (99.8%) over 1872bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1825/1864 (97.9%) over 1872bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1825/1856 (98.3%) over 1867bp for offset 0 <== THIS IS REAL YBR215W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR215W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/254 (0.4%). Conflicting: 0/254 (0.0%). NoInfo: 0/254 (0.0%). Certain keep: 253/254 (99.6%) ########################## YBR217W (561bp = 187AA) has 15 hits (APG12) involved in autophagy Spar (test2) orthologous hit at 87% f561/561 (100.0%) over 561bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f561/561 (100.0%) over 561bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f287/294 (97.6%) over 296bp for offset 0 <== THIS IS REAL YBR217W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR217W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/255 (0.4%). Conflicting: 0/255 (0.0%). NoInfo: 0/255 (0.0%). Certain keep: 254/255 (99.6%) ########################## YBR218C (3543bp = 1181AA) has 17 hits (PYC2) pyruvate carboxylase Spar (test2) orthologous hit at 92% f3543/3543 (100.0%) over 3543bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f3543/3543 (100.0%) over 3543bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f3526/3540 (99.6%) over 3543bp for offset 0 <== THIS IS REAL YBR218C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR218C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/256 (0.4%). Conflicting: 0/256 (0.0%). NoInfo: 0/256 (0.0%). Certain keep: 255/256 (99.6%) ########################## YBR221C (1101bp = 367AA) has 4 hits (PDB1) beta subunit of pyruvate dehydrogenas.. (E1 beta) (91) Spar (test2) orthologous hit at 93% f1098/1098 (100.0%) over 1101bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1094/1098 (99.6%) over 1101bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1095/1095 (100.0%) over 1101bp for offset 0 <== THIS IS REAL YBR221C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR221C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/257 (0.4%). Conflicting: 0/257 (0.0%). NoInfo: 0/257 (0.0%). Certain keep: 256/257 (99.6%) ########################## YBR222C (1632bp = 544AA) has 5 hits (FAT2) Probable AMP-binding protein Spar (test2) orthologous hit at 91% f1632/1632 (100.0%) over 1632bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1616/1630 (99.1%) over 1632bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1626/1629 (99.8%) over 1630bp for offset 0 <== THIS IS REAL YBR222C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR222C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/258 (0.4%). Conflicting: 0/258 (0.0%). NoInfo: 0/258 (0.0%). Certain keep: 257/258 (99.6%) ########################## YBR223C (1635bp = 545AA) has 5 hits (TDP1) Flanking ORFs are: YBR221C and YBR223C. YBR223C skipped ########################## YBR227C (1563bp = 521AA) has 11 hits (MCX1) Mitochondrial ATP-binding protein, s..ar to ClpX (94) Spar (test2) orthologous hit at 89% f1563/1563 (100.0%) over 1563bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1540/1561 (98.7%) over 1563bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1534/1551 (98.9%) over 1558bp for offset 0 <== THIS IS REAL YBR227C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR227C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/259 (0.4%). Conflicting: 0/259 (0.0%). NoInfo: 0/259 (0.0%). Certain keep: 258/259 (99.6%) ########################## YBR228W (915bp = 305AA) has 10 hits (SLX1) Spar (test2) orthologous hit at 89% f915/915 (100.0%) over 915bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f899/911 (98.7%) over 914bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f792/912 (86.8%) over 915bp for offset 0 Sbay (test3) Longest island has f97 at 78% over 817bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 90915 |________|_________|_________|_________|_________|_________|________|_________|_________|_| 97f 78% 817bp Sb0full |.........|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YBR228W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR228W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/260 (0.4%). Conflicting: 0/260 (0.0%). NoInfo: 0/260 (0.0%). Certain keep: 259/260 (99.6%) ########################## YBR229C (2865bp = 955AA) has 10 hits (ROT2) Glucosidase II Spar (test2) orthologous hit at 88% f1764/1923 (91.7%) over 1923bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2834/2858 (99.2%) over 2865bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2180/2851 (76.5%) over 2865bp for offset 0 Sbay (test3) Longest island has f96 at 77% over 1539bp <== THIS IS REAL 0 100200300400500600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 2k |__|__|__|__|__|__|__|___|__|__|__|__|__|__|___|__|__|__|__|__|__|___|__|__|__|__|__|__|__| 96f 77% 1539bp 100f 81% 612bp 96f 75% 723bp Sb0full |===============================================|oooooooooooooooooo|======================| YBR229C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR229C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/261 (0.4%). Conflicting: 0/261 (0.0%). NoInfo: 0/261 (0.0%). Certain keep: 260/261 (99.6%) ########################## YBR231C (912bp = 304AA) has 31 hits (AOR1) Actin Overexpression Resistant Spar (test2) orthologous hit at 82% f595/608 (97.9%) over 613bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f882/909 (97.0%) over 911bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 56% f229/370 (61.9%) over 393bp for offset 0 Sbay (test3) Longest island has f89 at 57% over 188bp Sbay (test2) non-orthologous hit at 76% f295/299 (98.7%) over 299bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 90912 |________|_________|_________|_________|_________|_________|_________|________|_________|_| 1089f 57% 188bp 71f 52% 71f 100f 56% 18bp Sb558full ||x|==================|xxxx>..|=>.|=>..> | YBR231C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR231C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/262 (0.4%). Conflicting: 0/262 (0.0%). NoInfo: 0/262 (0.0%). Certain keep: 261/262 (99.6%) ########################## YBR233W (1242bp = 414AA) has 4 hits (PBP2) Homolog to human hnRNP complex K protein Flanking ORFs are: YBR230C and YBR232C. YBR233W skipped ########################## YBR233W-A (285bp = 95AA) has 7 hits (DAD3) Hypothetical ORF identified by homolo..487:31-36. (118) Spar (test2) orthologous hit at 90% f281/281 (100.0%) over 281bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f270/275 (98.2%) over 277bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f269/272 (98.9%) over 273bp for offset 0 <== THIS IS REAL YBR233W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR233W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/263 (0.4%). Conflicting: 0/263 (0.0%). NoInfo: 0/263 (0.0%). Certain keep: 262/263 (99.6%) ########################## YBR234C (1155bp = 385AA) has 4 hits (ARC40) component of Arp2/Arp3 protein complex Spar (test2) orthologous hit at 91% f1155/1155 (100.0%) over 1155bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1144/1153 (99.2%) over 1155bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1140/1151 (99.0%) over 1154bp for offset 0 <== THIS IS REAL YBR234C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR234C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/264 (0.4%). Conflicting: 0/264 (0.0%). NoInfo: 0/264 (0.0%). Certain keep: 263/264 (99.6%) ########################## YBR236C (1311bp = 437AA) has 8 hits (ABD1) RNA (guanine-7-)methyltransferase (ca..ansferase) (100) Spar (test2) orthologous hit at 92% f1058/1058 (100.0%) over 1058bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1291/1306 (98.9%) over 1309bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1263/1302 (97.0%) over 1305bp for offset 1 <== THIS IS REAL YBR236C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR236C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/265 (0.4%). Conflicting: 0/265 (0.0%). NoInfo: 0/265 (0.0%). Certain keep: 264/265 (99.6%) ########################## YBR237W (2550bp = 850AA) has 51 hits (PRP5) RNA helicase homolog Spar (test2) orthologous hit at 88% f2526/2546 (99.2%) over 2549bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2303/2361 (97.5%) over 2363bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2458/2539 (96.8%) over 2549bp for offset 0 <== THIS IS REAL YBR237W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR237W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/266 (0.4%). Conflicting: 0/266 (0.0%). NoInfo: 0/266 (0.0%). Certain keep: 265/266 (99.6%) ########################## YBR240C (1353bp = 451AA) has 5 hits (THI2) Probable Zn-finger protein Spar (test2) orthologous hit at 90% f1353/1353 (100.0%) over 1353bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1346/1347 (99.9%) over 1353bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f731/744 (98.3%) over 749bp for offset 0 <== THIS IS REAL YBR240C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR240C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/267 (0.4%). Conflicting: 0/267 (0.0%). NoInfo: 0/267 (0.0%). Certain keep: 266/267 (99.6%) ########################## YBR243C (1347bp = 449AA) has 5 hits (ALG7) UDP-N-acetyl-glucosamine-1-P transferase (GPT) Spar (test2) orthologous hit at 91% f1347/1347 (100.0%) over 1347bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1347/1347 (100.0%) over 1347bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f637/653 (97.5%) over 655bp for offset 0 <== THIS IS REAL YBR243C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR243C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/268 (0.4%). Conflicting: 0/268 (0.0%). NoInfo: 0/268 (0.0%). Certain keep: 267/268 (99.6%) ########################## YBR244W (489bp = 163AA) has 15 hits (GPX2) Probable glutathione peroxidase (EC 1.11.1.9) Spar (test2) orthologous hit at 90% f489/489 (100.0%) over 489bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f489/489 (100.0%) over 489bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f489/489 (100.0%) over 489bp for offset 0 <== THIS IS REAL YBR244W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR244W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/269 (0.4%). Conflicting: 0/269 (0.0%). NoInfo: 0/269 (0.0%). Certain keep: 268/269 (99.6%) ########################## YBR245C (3390bp = 1130AA) has 125 hits (ISW1) ATPase component of a four subunit..ng complex (109) Spar (test2) orthologous hit at 90% f3240/3377 (95.9%) over 3381bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2439/2439 (100.0%) over 2439bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2841/2964 (95.9%) over 2970bp for offset 2 <== THIS IS REAL YBR245C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR245C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/270 (0.4%). Conflicting: 0/270 (0.0%). NoInfo: 0/270 (0.0%). Certain keep: 269/270 (99.6%) ########################## YBR247C (1452bp = 484AA) has 182 hits (ENP1) Putative 57 kDa protein with an app..y SDS-PAGE (110) Spar (test2) orthologous hit at 91% f1442/1446 (99.7%) over 1452bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1438/1443 (99.7%) over 1452bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1443/1444 (99.9%) over 1450bp for offset 0 <== THIS IS REAL YBR247C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR247C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/271 (0.4%). Conflicting: 0/271 (0.0%). NoInfo: 0/271 (0.0%). Certain keep: 270/271 (99.6%) ########################## YBR248C (1659bp = 553AA) has 6 hits (HIS7) glutamine amidotransferase:cyclase, a..e synthase (128) Spar (test2) orthologous hit at 90% f1653/1658 (99.7%) over 1659bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1659/1659 (100.0%) over 1659bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1644/1656 (99.3%) over 1659bp for offset 0 <== THIS IS REAL YBR248C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR248C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/272 (0.4%). Conflicting: 0/272 (0.0%). NoInfo: 0/272 (0.0%). Certain keep: 271/272 (99.6%) ########################## YBR249C (1113bp = 371AA) has 13 hits (ARO4) 3-deoxy-D-arabino-heptulosonate 7-ph.. isoenzyme (113) Spar (test2) orthologous hit at 94% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f1110/1110 (100.0%) over 1113bp for offset 0 <== THIS IS REAL YBR249C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR249C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/273 (0.4%). Conflicting: 0/273 (0.0%). NoInfo: 0/273 (0.0%). Certain keep: 272/273 (99.6%) ########################## YBR251W (924bp = 308AA) has 5 hits (MRPS5) Probable mitochondrial ribosomal protein S5 Spar (test2) orthologous hit at 91% f924/924 (100.0%) over 924bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f917/923 (99.3%) over 924bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f917/923 (99.3%) over 924bp for offset 0 <== THIS IS REAL YBR251W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR251W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/274 (0.4%). Conflicting: 0/274 (0.0%). NoInfo: 0/274 (0.0%). Certain keep: 273/274 (99.6%) ########################## YBR252W (444bp = 148AA) has 4 hits (DUT1) dUTP pyrophosphatase (dUTPase) Spar (test2) orthologous hit at 90% f443/443 (100.0%) over 443bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f443/443 (100.0%) over 443bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f443/443 (100.0%) over 443bp for offset 0 <== THIS IS REAL YBR252W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR252W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/275 (0.4%). Conflicting: 0/275 (0.0%). NoInfo: 0/275 (0.0%). Certain keep: 274/275 (99.6%) ########################## YBR253W (366bp = 122AA) has 6 hits (SRB6) transcription factor, part of Srb/Medi..or complex (92) Spar (test2) orthologous hit at 90% f365/365 (100.0%) over 365bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f361/365 (98.9%) over 366bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f366/366 (100.0%) over 366bp for offset 0 <== THIS IS REAL YBR253W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR253W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/276 (0.4%). Conflicting: 0/276 (0.0%). NoInfo: 0/276 (0.0%). Certain keep: 275/276 (99.6%) ########################## YBR254C (528bp = 176AA) has 4 hits (TRS20) probable membrane protein Spar (test2) orthologous hit at 89% f528/528 (100.0%) over 528bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f527/527 (100.0%) over 527bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f527/528 (99.8%) over 528bp for offset 0 <== THIS IS REAL YBR254C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR254C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/277 (0.4%). Conflicting: 0/277 (0.0%). NoInfo: 0/277 (0.0%). Certain keep: 276/277 (99.6%) ########################## YBR256C (717bp = 239AA) has 6 hits (RIB5) Riboflavin synthase alpha-chain Spar (test2) orthologous hit at 88% f717/717 (100.0%) over 717bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f710/716 (99.2%) over 717bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f714/716 (99.7%) over 717bp for offset 0 <== THIS IS REAL YBR256C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR256C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/278 (0.4%). Conflicting: 0/278 (0.0%). NoInfo: 0/278 (0.0%). Certain keep: 277/278 (99.6%) ########################## YBR257W (840bp = 280AA) has 23 hits (POP4) protein component of RNase MRP and RNaseP Spar (test2) orthologous hit at 89% f836/839 (99.6%) over 840bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f837/839 (99.8%) over 840bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f827/838 (98.7%) over 840bp for offset 0 <== THIS IS REAL YBR257W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR257W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/279 (0.4%). Conflicting: 0/279 (0.0%). NoInfo: 0/279 (0.0%). Certain keep: 278/279 (99.6%) ########################## YBR258C (429bp = 143AA) has 10 hits (SHG1) Spar (test2) orthologous hit at 86% f429/429 (100.0%) over 429bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f423/428 (98.8%) over 429bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f424/428 (99.1%) over 429bp for offset 0 <== THIS IS REAL YBR258C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR258C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/280 (0.4%). Conflicting: 0/280 (0.0%). NoInfo: 0/280 (0.0%). Certain keep: 279/280 (99.6%) ########################## YBR260C (2001bp = 667AA) has 11 hits (RGD1) (putative) GTPase-activating protein Spar (test2) orthologous hit at 90% f2001/2001 (100.0%) over 2001bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1997/1998 (99.9%) over 2001bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1287/1497 (86.0%) over 1512bp for offset 0 Sbay (test3) Longest island has f99 at 80% over 1191bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 22k |___|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|| 99f 80% 1191bp Sb966full |====================================================>..............> | YBR260C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR260C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/281 (0.4%). Conflicting: 0/281 (0.0%). NoInfo: 0/281 (0.0%). Certain keep: 280/281 (99.6%) ########################## YBR263W (1698bp = 566AA) has 8 hits (SHM1) Serine hydroxymethyltransferase, mitochondrial Flanking ORFs are: YBR259W and YBR261C. YBR263W skipped ########################## YBR264C (657bp = 219AA) has 11 hits (YPT10) similar to Rab proteins and other sm..g proteins (104) Spar (test2) orthologous hit at 89% f601/657 (91.5%) over 657bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f621/651 (95.4%) over 657bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f610/647 (94.3%) over 654bp for offset 0 <== THIS IS REAL YBR264C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR264C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/282 (0.4%). Conflicting: 0/282 (0.0%). NoInfo: 0/282 (0.0%). Certain keep: 281/282 (99.6%) ########################## YBR265W (963bp = 321AA) has 6 hits (TSC10) 3-ketosphinganine reductase Spar (test2) orthologous hit at 91% f963/963 (100.0%) over 963bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f963/963 (100.0%) over 963bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f957/962 (99.5%) over 963bp for offset 2 <== THIS IS REAL YBR265W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR265W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/283 (0.4%). Conflicting: 0/283 (0.0%). NoInfo: 0/283 (0.0%). Certain keep: 282/283 (99.6%) ########################## YBR268W (318bp = 106AA) has 3 hits (MRPL37) Probable mitochondrial protein L37 Spar (test2) orthologous hit at 88% f318/318 (100.0%) over 318bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f318/318 (100.0%) over 318bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f318/318 (100.0%) over 318bp for offset 0 <== THIS IS REAL YBR268W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR268W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/284 (0.4%). Conflicting: 0/284 (0.0%). NoInfo: 0/284 (0.0%). Certain keep: 283/284 (99.6%) ########################## YBR272C (1443bp = 481AA) has 9 hits (HSM3) Hsm3p may be a member of the yeast Mu..log family (97) Spar (test2) orthologous hit at 88% f1434/1434 (100.0%) over 1434bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1418/1428 (99.3%) over 1434bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1410/1429 (98.7%) over 1434bp for offset 0 <== THIS IS REAL YBR272C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR272C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/285 (0.4%). Conflicting: 0/285 (0.0%). NoInfo: 0/285 (0.0%). Certain keep: 284/285 (99.6%) ########################## YBR274W (1584bp = 528AA) has 63 hits (CHK1) Protein kinase Chk1 Spar (test2) orthologous hit at 90% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1580/1580 (100.0%) over 1580bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1372/1385 (99.1%) over 1386bp for offset 0 <== THIS IS REAL YBR274W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR274W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/286 (0.3%). Conflicting: 0/286 (0.0%). NoInfo: 0/286 (0.0%). Certain keep: 285/286 (99.7%) ########################## YBR275C (5751bp = 1917AA) has 36 hits (RIF1) RAP1-interacting factor, involved i.. chromatin (118) Spar (test2) orthologous hit at 83% f5260/5344 (98.4%) over 5359bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f5379/5602 (96.0%) over 5644bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f3806/3863 (98.5%) over 3873bp for offset 0 <== THIS IS REAL YBR275C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR275C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/287 (0.3%). Conflicting: 0/287 (0.0%). NoInfo: 0/287 (0.0%). Certain keep: 286/287 (99.7%) ########################## YBR276C (2424bp = 808AA) has 10 hits (PPS1) dual specificity protein phosphatase Spar (test2) orthologous hit at 86% f2404/2416 (99.5%) over 2424bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2393/2419 (98.9%) over 2424bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1752/1833 (95.6%) over 1847bp for offset 0 <== THIS IS REAL YBR276C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR276C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/288 (0.3%). Conflicting: 0/288 (0.0%). NoInfo: 0/288 (0.0%). Certain keep: 287/288 (99.7%) ########################## YBR278W (606bp = 202AA) has 257 hits (DPB3) C and C' subunits of DNA polymerase II Flanking ORFs are: YBR275C and YBR277C. YBR278W skipped ########################## YBR279W (1338bp = 446AA) has 181 hits (PAF1) RNA polymerase II-associated protein Spar (test2) orthologous hit at 86% f1299/1337 (97.2%) over 1337bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1201/1227 (97.9%) over 1233bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1270/1328 (95.6%) over 1335bp for offset 0 <== THIS IS REAL YBR279W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR279W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/289 (0.3%). Conflicting: 0/289 (0.0%). NoInfo: 0/289 (0.0%). Certain keep: 288/289 (99.7%) ########################## YBR282W (441bp = 147AA) (tdist=44.5k) has 4 hits (MRPL27) Mitochondrial ribosoma..27 (YmL27) (104) Spar (test2) orthologous hit at 88% f441/441 (100.0%) over 441bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f441/441 (100.0%) over 441bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f441/441 (100.0%) over 441bp for offset 0 <== THIS IS REAL YBR282W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR282W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/290 (0.3%). Conflicting: 0/290 (0.0%). NoInfo: 0/290 (0.0%). Certain keep: 289/290 (99.7%) ########################## YBR283C (1473bp = 491AA) (tdist=42.7k) has 9 hits (SSH1) Probable SEC61 protein homolog Spar (test2) orthologous hit at 90% f1473/1473 (100.0%) over 1473bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1473/1473 (100.0%) over 1473bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1469/1472 (99.8%) over 1473bp for offset 0 <== THIS IS REAL YBR283C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR283C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/291 (0.3%). Conflicting: 0/291 (0.0%). NoInfo: 0/291 (0.0%). Certain keep: 290/291 (99.7%) ########################## YBR286W (1692bp = 564AA) (tdist=36.8k) has 8 hits (APE3) Aminopeptidase yscIII Spar (test2) orthologous hit at 89% f1625/1646 (98.7%) over 1647bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1643/1643 (100.0%) over 1643bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1608/1639 (98.1%) over 1643bp for offset 2 <== THIS IS REAL YBR286W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR286W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/292 (0.3%). Conflicting: 0/292 (0.0%). NoInfo: 0/292 (0.0%). Certain keep: 291/292 (99.7%) ########################## YBR288C (1452bp = 484AA) (tdist=33.7k) has 14 hits (APM3) clathrin associated pr..dium chain (98) Spar (test2) orthologous hit at 91% f1452/1452 (100.0%) over 1452bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1424/1450 (98.2%) over 1452bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1443/1451 (99.4%) over 1452bp for offset 0 <== THIS IS REAL YBR288C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR288C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/293 (0.3%). Conflicting: 0/293 (0.0%). NoInfo: 0/293 (0.0%). Certain keep: 292/293 (99.7%) ########################## YBR289W (2718bp = 906AA) (tdist=30.7k) has 1920 hits (SNF5) subunit of the chrom..wi complex (111) Spar (test2) orthologous hit at 84% f2181/2220 (98.2%) over 2230bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f2348/2588 (90.7%) over 2624bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2071/2133 (97.1%) over 2145bp for offset 0 <== THIS IS REAL YBR289W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR289W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/294 (0.3%). Conflicting: 0/294 (0.0%). NoInfo: 0/294 (0.0%). Certain keep: 293/294 (99.7%) ########################## YBR290W (966bp = 322AA) (tdist=29.6k) has 8 hits (BSD2) copper transporter Spar (test2) orthologous hit at 91% f963/965 (99.8%) over 966bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f864/905 (95.5%) over 910bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f860/890 (96.6%) over 894bp for offset 0 <== THIS IS REAL YBR290W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR290W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/295 (0.3%). Conflicting: 0/295 (0.0%). NoInfo: 0/295 (0.0%). Certain keep: 294/295 (99.7%) ########################## YBR291C (900bp = 300AA) (tdist=28.6k) has 9 hits (CTP1) citrate tranporter in mi..r membrane (106) Spar (test2) orthologous hit at 90% f900/900 (100.0%) over 900bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f593/628 (94.4%) over 630bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f889/898 (99.0%) over 900bp for offset 0 <== THIS IS REAL YBR291C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR291C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/296 (0.3%). Conflicting: 0/296 (0.0%). NoInfo: 0/296 (0.0%). Certain keep: 295/296 (99.7%) ########################## YBR294W (2580bp = 860AA) (tdist=21.3k) has 17 hits (SUL1) Probable sulfate trans..rt protein (92) Spar (test2) orthologous hit at 89% f2580/2580 (100.0%) over 2580bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2546/2569 (99.1%) over 2577bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1643/1665 (98.7%) over 1670bp for offset 0 <== THIS IS REAL YBR294W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR294W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/297 (0.3%). Conflicting: 0/297 (0.0%). NoInfo: 0/297 (0.0%). Certain keep: 296/297 (99.7%) ########################## YBR295W (3651bp = 1217AA) (tdist=16.6k) has 11 hits (PCA1) Putative P-type Cu(2+..ing ATPase (101) Spar (test2) orthologous hit at 85% f3055/3060 (99.8%) over 3060bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2564/2629 (97.5%) over 2637bp for offset 2 <== THIS IS REAL YBR295W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YBR295W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 1/298 (0.3%). Conflicting: 0/298 (0.0%). NoInfo: 0/298 (0.0%). Certain keep: 297/298 (99.7%) ########################## YBR296C (1725bp = 575AA) (tdist=14.6k) has 6 hits (PHO89) Probable Na+/Pi symporter Spar (test2) orthologous hit at 91% f1725/1725 (100.0%) over 1725bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f935/1723 (54.3%) over 1725bp for offset 1 Smik (test3) Longest island has f100 at 84% over 935bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1725/1725 (100.0%) over 1725bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k1k |____|____|____|____|_____|____|____|____|____|_____|____|____|____|_____|____|____|____|_| 100f 84% 935bp 100f 86% 632bp Sm699full |===============================================>........|oooooooooooooooooooooooooooooooo| YBR296C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR296C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/299 (0.3%). Conflicting: 0/299 (0.0%). NoInfo: 0/299 (0.0%). Certain keep: 298/299 (99.7%) ########################## YBR297W (1407bp = 469AA) (tdist=11.2k) has 28 hits (MAL33) MAL-activator protein Spar (test2) orthologous hit at 90% f1401/1406 (99.6%) over 1407bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f1386/1403 (98.8%) over 1407bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 72% f1398/1407 (99.4%) over 1407bp for offset 0 <== THIS IS REAL YBR297W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR297W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/300 (0.3%). Conflicting: 0/300 (0.0%). NoInfo: 0/300 (0.0%). Certain keep: 299/300 (99.7%) ########################## YBR298C (1845bp = 615AA) (tdist=8.7k) has 23 hits (MAL31) Maltose permease Spar (test2) non-orthologous hit at 89% f1845/1845 (100.0%) over 1845bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1840/1844 (99.8%) over 1845bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f1516/1834 (82.7%) over 1845bp for offset 0 Sbay (test3) Longest island has f98 at 79% over 1540bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|____|____|____|____|___|____|____|____|____|____|____|____|___|____|__| 92f 73% 313bp 98f 79% 1540bp Sb66full |==============|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YBR298C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR298C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/301 (0.3%). Conflicting: 0/301 (0.0%). NoInfo: 0/301 (0.0%). Certain keep: 300/301 (99.7%) ########################## YBR299W (1755bp = 585AA) (tdist=6.0k) has 65 hits (MAL32) Maltase Spar (test2) non-orthologous hit at 88% f1743/1752 (99.5%) over 1754bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1742/1753 (99.4%) over 1755bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f1423/1437 (99.0%) over 1440bp for offset 0 <== THIS IS REAL YBR299W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR299W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/302 (0.3%). Conflicting: 0/302 (0.0%). NoInfo: 0/302 (0.0%). Certain keep: 301/302 (99.7%) ########################## YBR301W (363bp = 121AA) (tdist=3.7k) has 122 hits (DAN3) Flanking ORFs are: YBR298C and YBR300C. YBR301W skipped ########################## YBR302C (1140bp = 380AA) (tdist=1.7k) has 77 hits (COS2) similar to other member..ric region (131) Spar (test2) orthologous hit at 72% f438/565 (77.5%) over 569bp for offset 0 Spar (test3) Longest island has f94 at 72% over 465bp <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f1098/1131 (97.1%) over 1140bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 66% f655/1123 (58.3%) over 1139bp for offset 0 Sbay (test3) Longest island has f89 at 65% over 441bp Sbay (test2) non-orthologous hit at 65% f573/1126 (50.9%) over 1140bp for offset 2 Sbay (test3) Longest island has f96 at 66% over 445bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|_______|_______|_______|______|_______|___| 94f 72% 465bp Sp215brk |.......|oooooooooooooooooooooooooooooooooooo| 98f 64% 255bp 89f 67% 227bp 89f 65% 441bp 97f 74% 203bp Sb606full |===================>.|=================|ooooooooooooooooooooooooooooooooo>|==============|> 96f 66% 445bp 97f 70% 371bp Sb206full |.......................|==================================>.|xxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YBR302C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YBR302C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/303 (0.3%). Conflicting: 0/303 (0.0%). NoInfo: 0/303 (0.0%). Certain keep: 302/303 (99.7%) ########################## YCL067C (633bp = 211AA) (tdist=12.3k) has 23 hits (HMLALPHA2) Mating type protein alpha-2 Spar (test2) orthologous hit at 99% f558/571 (97.7%) over 573bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 100% f430/430 (100.0%) over 430bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 98% f572/575 (99.5%) over 578bp for offset 0 <== THIS IS REAL YCL067C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL067C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/304 (0.3%). Conflicting: 0/304 (0.0%). NoInfo: 0/304 (0.0%). Certain keep: 303/304 (99.7%) ########################## YCL066W (528bp = 176AA) (tdist=13.2k) has 16 hits (HMLALPHA1) transcription fact..ific genes (133) Flanking ORFs are: YCL068C and YCL066W. YCL066W skipped ########################## YCL064C (1083bp = 361AA) (tdist=15.7k) has 12 hits (CHA1) catabolic serine (thre..ehydratase (98) Spar (test2) orthologous hit at 89% f1083/1083 (100.0%) over 1083bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1064/1081 (98.4%) over 1083bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f336/339 (99.1%) over 340bp for offset 0 <== THIS IS REAL YCL064C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL064C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/305 (0.3%). Conflicting: 0/305 (0.0%). NoInfo: 0/305 (0.0%). Certain keep: 304/305 (99.7%) ########################## YCL061C (3291bp = 1097AA) (tdist=18.8k) has 122 hits (MRC1) protein involved in ..checkpoint (102) Spar (test2) orthologous hit at 83% f3148/3194 (98.6%) over 3204bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 65% f1723/2491 (69.2%) over 2572bp for offset 0 Smik (test3) Longest island has f96 at 77% over 1312bp <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1218/1290 (94.4%) over 1298bp for offset 0 <== THIS IS REAL 0 10020030400500600708009001k 1k1k 1k 1k 1k1k 1k 1k1k 2k 2k 2k2k 2k 2k 2k2k 2k 2k 3k3k 3k 3k |_|__|__|_|__|__|__|_|__|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|__|_|__|__|__|_|__|__| 96f 77% 1312bp Sm212full |===================================>..................................| YCL061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/306 (0.3%). Conflicting: 0/306 (0.0%). NoInfo: 0/306 (0.0%). Certain keep: 305/306 (99.7%) ########################## YCL059C (951bp = 317AA) (tdist=22.4k) has 25 hits (KRR1) involved in cell divisi..ermination (104) Spar (test2) orthologous hit at 92% f951/951 (100.0%) over 951bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f951/951 (100.0%) over 951bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f950/950 (100.0%) over 950bp for offset 0 <== THIS IS REAL YCL059C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL059C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/307 (0.3%). Conflicting: 0/307 (0.0%). NoInfo: 0/307 (0.0%). Certain keep: 306/307 (99.7%) ########################## YCL058C (459bp = 153AA) (tdist=23.5k) has 7 hits (FYV5) Hypothetical ORF Spar (test2) orthologous hit at 87% f382/457 (83.6%) over 459bp for offset 2 Spar (test3) Longest island has f97 at 89% over 394bp <== THIS IS REAL Smik (test2) orthologous hit at 84% f380/456 (83.3%) over 459bp for offset 1 Smik (test3) Longest island has f98 at 85% over 388bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f397/449 (88.4%) over 453bp for offset 0 Sbay (test3) Longest island has f97 at 80% over 410bp <== THIS IS REAL 0 100 200 300 400 459 |__________________|___________________|__________________|___________________|___________| 97f 89% 394bp Sp84full ||xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>..........| 98f 85% 388bp Sm212full |......|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo>......| 97f 80% 410bp Sb1075ful |........|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YCL058C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL058C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/308 (0.3%). Conflicting: 0/308 (0.0%). NoInfo: 0/308 (0.0%). Certain keep: 307/308 (99.7%) ########################## YCL057W (2139bp = 713AA) (tdist=24.7k) has 8 hits (PRD1) Saccharolysin (oligopep..dase yscD) (92) Spar (test2) orthologous hit at 90% f2133/2138 (99.8%) over 2139bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2126/2137 (99.5%) over 2139bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2139/2139 (100.0%) over 2139bp for offset 0 <== THIS IS REAL YCL057W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL057W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/309 (0.3%). Conflicting: 0/309 (0.0%). NoInfo: 0/309 (0.0%). Certain keep: 308/309 (99.7%) ########################## YCL055W (1008bp = 336AA) (tdist=27.9k) has 5 hits (KAR4) transcription factor in.. karyogamy (99) Spar (test2) orthologous hit at 91% f1005/1005 (100.0%) over 1008bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1002/1005 (99.7%) over 1008bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1002/1005 (99.7%) over 1008bp for offset 0 <== THIS IS REAL YCL055W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL055W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/310 (0.3%). Conflicting: 0/310 (0.0%). NoInfo: 0/310 (0.0%). Certain keep: 309/310 (99.7%) ########################## YCL054W (2526bp = 842AA) (tdist=31.4k) has 109 hits (SPB1) Putative methyltransferase Spar (test2) orthologous hit at 92% f2526/2526 (100.0%) over 2526bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2523/2523 (100.0%) over 2526bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2524/2526 (99.9%) over 2526bp for offset 0 <== THIS IS REAL YCL054W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL054W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/311 (0.3%). Conflicting: 0/311 (0.0%). NoInfo: 0/311 (0.0%). Certain keep: 310/311 (99.7%) ########################## YCL052C (1251bp = 417AA) (tdist=34.1k) has 8 hits (PBN1) Protease B, nonderepressible form Spar (test2) orthologous hit at 90% f1243/1249 (99.5%) over 1251bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1239/1248 (99.3%) over 1250bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1233/1247 (98.9%) over 1250bp for offset 0 <== THIS IS REAL YCL052C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL052C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/312 (0.3%). Conflicting: 0/312 (0.0%). NoInfo: 0/312 (0.0%). Certain keep: 311/312 (99.7%) ########################## YCL051W (1752bp = 584AA) (tdist=35.8k) has 15 hits (LRE1) involved in laminarase..resistance (91) Spar (test2) orthologous hit at 86% f1626/1698 (95.8%) over 1706bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1249/1261 (99.0%) over 1262bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1588/1700 (93.4%) over 1716bp for offset 1 <== THIS IS REAL YCL051W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL051W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/313 (0.3%). Conflicting: 0/313 (0.0%). NoInfo: 0/313 (0.0%). Certain keep: 312/313 (99.7%) ########################## YCL050C (966bp = 322AA) (tdist=37.8k) has 10 hits (APA1) diadenosine 5',5'''-P1,..horylase I (113) Spar (test2) orthologous hit at 93% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL YCL050C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL050C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/314 (0.3%). Conflicting: 0/314 (0.0%). NoInfo: 0/314 (0.0%). Certain keep: 313/314 (99.7%) ########################## YCL043C (1569bp = 523AA) (tdist=48.6k) has 13 hits (PDI1) protein disulfide isomerase Flanking ORFs are: YCL051W and YCL049C. YCL043C skipped ########################## YCL040W (1503bp = 501AA) has 26 hits (GLK1) Glucokinase Flanking ORFs are: YCL051W and YCL049C. YCL040W skipped ########################## YCL038C (1587bp = 529AA) has 10 hits (AUT4) Spar (test2) orthologous hit at 91% f1587/1587 (100.0%) over 1587bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1579/1585 (99.6%) over 1586bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1568/1583 (99.1%) over 1586bp for offset 0 <== THIS IS REAL YCL038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/315 (0.3%). Conflicting: 0/315 (0.0%). NoInfo: 0/315 (0.0%). Certain keep: 314/315 (99.7%) ########################## YCL037C (1401bp = 467AA) has 138 hits (SRO9) RNA binding protein with La motif Spar (test2) orthologous hit at 92% f1398/1400 (99.9%) over 1401bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f905/1009 (89.7%) over 1023bp for offset 0 Smik (test3) Longest island has f98 at 83% over 787bp <== THIS IS REAL Sbay (test2) orthologous hit at 82% f983/1013 (97.0%) over 1026bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 11k |_____|_____|______|_____|______|_____|_____|______|_____|______|_____|______|_____|_____|| 98f 83% 787bp Sm212full |...............|=================================================| YCL037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/316 (0.3%). Conflicting: 0/316 (0.0%). NoInfo: 0/316 (0.0%). Certain keep: 315/316 (99.7%) ########################## YCL036W (1701bp = 567AA) has 9 hits (GFD2) Hypothetical ORF Spar (test2) orthologous hit at 89% f1701/1701 (100.0%) over 1701bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1676/1697 (98.8%) over 1700bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1681/1686 (99.7%) over 1688bp for offset 0 <== THIS IS REAL YCL036W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL036W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/317 (0.3%). Conflicting: 0/317 (0.0%). NoInfo: 0/317 (0.0%). Certain keep: 316/317 (99.7%) ########################## YCL035C (333bp = 111AA) has 7 hits (GRX1) Glutaredoxin Spar (test2) orthologous hit at 90% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f332/332 (100.0%) over 332bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL YCL035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/318 (0.3%). Conflicting: 0/318 (0.0%). NoInfo: 0/318 (0.0%). Certain keep: 317/318 (99.7%) ########################## YCL034W (1065bp = 355AA) has 6 hits (LSB5) Spar (test2) orthologous hit at 90% f1065/1065 (100.0%) over 1065bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f548/597 (91.8%) over 599bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1045/1063 (98.3%) over 1065bp for offset 0 <== THIS IS REAL YCL034W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL034W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/319 (0.3%). Conflicting: 0/319 (0.0%). NoInfo: 0/319 (0.0%). Certain keep: 318/319 (99.7%) ########################## YCL032W (1041bp = 347AA) has 4 hits (STE50) STE50 Spar (test2) orthologous hit at 92% f1041/1041 (100.0%) over 1041bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1038/1040 (99.8%) over 1041bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1041/1041 (100.0%) over 1041bp for offset 0 <== THIS IS REAL YCL032W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL032W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/320 (0.3%). Conflicting: 0/320 (0.0%). NoInfo: 0/320 (0.0%). Certain keep: 319/320 (99.7%) ########################## YCL031C (894bp = 298AA) has 21 hits (RRP7) involved in rRNA processing Spar (test2) orthologous hit at 91% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL YCL031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/321 (0.3%). Conflicting: 0/321 (0.0%). NoInfo: 0/321 (0.0%). Certain keep: 320/321 (99.7%) ########################## YCL030C (2400bp = 800AA) has 7 hits (HIS4) histidinol dehydrogenase Spar (test2) orthologous hit at 92% f2396/2398 (99.9%) over 2399bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2395/2399 (99.8%) over 2400bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2394/2399 (99.8%) over 2400bp for offset 0 <== THIS IS REAL YCL030C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL030C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/322 (0.3%). Conflicting: 0/322 (0.0%). NoInfo: 0/322 (0.0%). Certain keep: 321/322 (99.7%) ########################## YCL029C (1323bp = 441AA) has 8 hits (BIK1) Microtubule-binding protein Spar (test2) orthologous hit at 92% f1322/1322 (100.0%) over 1322bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1322/1322 (100.0%) over 1322bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1311/1320 (99.3%) over 1323bp for offset 0 <== THIS IS REAL YCL029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/323 (0.3%). Conflicting: 0/323 (0.0%). NoInfo: 0/323 (0.0%). Certain keep: 322/323 (99.7%) ########################## YCL028W (1218bp = 406AA) has 131 hits (RNQ1) transferable epigenetic modifier Spar (test2) orthologous hit at 86% f691/757 (91.3%) over 769bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 72% f933/1108 (84.2%) over 1145bp for offset 0 Smik (test3) Longest island has f95 at 83% over 560bp <== THIS IS REAL Sbay (test2) orthologous hit at 73% f909/1076 (84.5%) over 1100bp for offset 0 Sbay (test3) Longest island has f98 at 81% over 504bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k1k |______|______|_______|______|______|_______|______|_______|______|______|_______|______|_| 95f 83% 560bp 85f 76% 272bp Sm212full |========================================>........|===================>.............> | 98f 81% 504bp 92f 77% 404bp Sb95full |====================================>...............|=============================> | YCL028W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL028W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/324 (0.3%). Conflicting: 0/324 (0.0%). NoInfo: 0/324 (0.0%). Certain keep: 323/324 (99.7%) ########################## YCL027W (1539bp = 513AA) has 6 hits (FUS1) serine/threonine-rich membrane protein Spar (test2) orthologous hit at 87% f1535/1538 (99.8%) over 1539bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1530/1538 (99.5%) over 1539bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1462/1520 (96.2%) over 1534bp for offset 0 <== THIS IS REAL YCL027W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL027W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/325 (0.3%). Conflicting: 0/325 (0.0%). NoInfo: 0/325 (0.0%). Certain keep: 324/325 (99.7%) ########################## YCL026C-A (582bp = 194AA) has 5 hits (FRM2) involved in fatty acid signaling Spar (test2) orthologous hit at 90% f582/582 (100.0%) over 582bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 64% f492/549 (89.6%) over 562bp for offset 0 Smik (test3) Longest island has f86 at 65% over 575bp Sbay (test2) orthologous hit at 66% f495/568 (87.1%) over 582bp for offset 2 Sbay (test3) Longest island has f84 at 66% over 587bp 0 100 200 300 400 500 582 |______________|______________|_______________|______________|_______________|____________| 86f 65% 575bp Sm212full |========================================================================================>| 84f 66% 587bp Sb95full |=========================================================================================| YCL026C-A: kill: - keep: Spar YCL026C-A - Not enough info. Kill () and Keep (Spar) Current total: Certain kills: 1/326 (0.3%). Conflicting: 0/326 (0.0%). NoInfo: 1/326 (0.3%). Certain keep: 324/326 (99.4%) ########################## YCL025C (1788bp = 596AA) has 61 hits (AGP1) Amino acid permease Spar (test2) orthologous hit at 92% f1771/1788 (99.0%) over 1788bp for offset 1 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1772/1786 (99.2%) over 1786bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f1764/1782 (99.0%) over 1783bp for offset 1 <== THIS IS REAL YCL025C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL025C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/327 (0.3%). Conflicting: 0/327 (0.0%). NoInfo: 1/327 (0.3%). Certain keep: 325/327 (99.4%) ########################## YCL024W (3114bp = 1038AA) has 72 hits (KCC4) protein kinase related to S. pombe Nim1p . YCL024W skipped ########################## YCL018W (1095bp = 365AA) has 10 hits (LEU2) beta-IPM (isopropylmalate) dehydrogenase Spar (test2) non-orthologous hit at 61% f169/242 (69.8%) over 250bp for offset 2 Spar (test3) Longest island has f82 at 70% over 106bp Spar (test2) non-orthologous hit at 60% f143/233 (61.4%) over 241bp for offset 0 Spar (test3) Longest island has f100 at 63% over 57bp Smik (test2) non-orthologous hit at 57% f220/370 (59.5%) over 388bp for offset 1 Smik (test3) Longest island has f79 at 59% over 116bp Smik (test2) non-orthologous hit at 90% f244/248 (98.4%) over 248bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f206/206 (100.0%) over 206bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|_______|________|_______|_______|_______|_______|________|_______| 82f 70% 10684f 90f 680Sp25fullb |========>.|=>.|====|x| 86f 89f 69%86f100f 6Sp281full |=>.|==>...|xx|===>>| 89f 84f81f 64% 979f 59% 116Sm601full |....|o>.|oo|======>.|=========>| YCL018W: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YCL018W - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 1/328 (0.3%). Conflicting: 0/328 (0.0%). NoInfo: 1/328 (0.3%). Certain keep: 326/328 (99.4%) ########################## YCL017C (1494bp = 498AA) has 4 hits (NFS1) NifS-like protein Spar (test2) orthologous hit at 92% f1392/1392 (100.0%) over 1392bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1402/1402 (100.0%) over 1402bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1472/1488 (98.9%) over 1494bp for offset 0 <== THIS IS REAL YCL017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/329 (0.3%). Conflicting: 0/329 (0.0%). NoInfo: 1/329 (0.3%). Certain keep: 327/329 (99.4%) ########################## YCL016C (1143bp = 381AA) has 5 hits (DCC1) Spar (test2) orthologous hit at 90% f1143/1143 (100.0%) over 1143bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1143/1143 (100.0%) over 1143bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1131/1141 (99.1%) over 1143bp for offset 0 <== THIS IS REAL YCL016C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL016C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/330 (0.3%). Conflicting: 0/330 (0.0%). NoInfo: 1/330 (0.3%). Certain keep: 328/330 (99.4%) ########################## YCL014W (4911bp = 1637AA) has 28 hits (BUD3) involved in bud site selection Spar (test2) orthologous hit at 86% f2924/2953 (99.0%) over 2954bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2448/2512 (97.5%) over 2519bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2637/2746 (96.0%) over 2764bp for offset 0 <== THIS IS REAL YCL014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/331 (0.3%). Conflicting: 0/331 (0.0%). NoInfo: 1/331 (0.3%). Certain keep: 329/331 (99.4%) ########################## YCL011C (1284bp = 428AA) has 18 hits (GBP2) Protein with RNA recognition motifs Spar (test2) orthologous hit at 91% f1284/1284 (100.0%) over 1284bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1283/1284 (99.9%) over 1284bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1024/1054 (97.2%) over 1055bp for offset 0 <== THIS IS REAL YCL011C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL011C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/332 (0.3%). Conflicting: 0/332 (0.0%). NoInfo: 1/332 (0.3%). Certain keep: 330/332 (99.4%) ########################## YCL010C (780bp = 260AA) has 9 hits (SGF29) Probable 29kKDa Subunit of SAGA histo..se complex (108) Spar (test2) orthologous hit at 91% f780/780 (100.0%) over 780bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f774/780 (99.2%) over 780bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f486/536 (90.7%) over 542bp for offset 0 <== THIS IS REAL YCL010C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL010C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/333 (0.3%). Conflicting: 0/333 (0.0%). NoInfo: 1/333 (0.3%). Certain keep: 331/333 (99.4%) ########################## YCL009C (930bp = 310AA) has 4 hits (ILV6) Small regulatory subunit of Acetolacta..e synthase (91) Spar (test2) orthologous hit at 93% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f929/929 (100.0%) over 929bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f929/929 (100.0%) over 929bp for offset 0 <== THIS IS REAL YCL009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/334 (0.3%). Conflicting: 0/334 (0.0%). NoInfo: 1/334 (0.3%). Certain keep: 332/334 (99.4%) ########################## YCL008C (891bp = 297AA) has 5 hits (STP22) homologous to mouse and human Tsg101 ..lity genes (106) Spar (test2) orthologous hit at 89% f346/357 (96.9%) over 358bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 82% f880/890 (98.9%) over 891bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f650/669 (97.2%) over 671bp for offset 2 <== THIS IS REAL YCL008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 1/335 (0.3%). Conflicting: 0/335 (0.0%). NoInfo: 1/335 (0.3%). Certain keep: 333/335 (99.4%) ########################## YCL007C (393bp = 131AA) has 27 hits (CWH36) involved in cell wall biogenesis Spar (test2) orthologous hit at 91% f240/390 (61.5%) over 393bp for offset 0 Spar (test3) Longest island has f92 at 95% over 130bp Smik (test2) orthologous hit at 83% f198/385 (51.4%) over 393bp for offset 2 Smik (test3) Longest island has f87 at 82% over 205bp Sbay (test2) orthologous hit at 77% f170/381 (44.6%) over 393bp for offset 1 Sbay (test3) Longest island has f90 at 78% over 131bp 0 100 200 300 393 |_____________________|______________________|______________________|_____________________| 100f 91% 92bp 100f 87% 30b92f 95% 130bp 100f 93% 119bp Sp86full |====================|xxxxxx>....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxx|==========================| 94f 87% 107bp 87f 82% 205bp 100f 89% Sm214full |=======================>.........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|========|=> 90f 78% 131bp 100f 90% 108bp 93f 76% 59bp 100f 9Sb94full |=============================>......|ooooooooooooooooooooooo>........|ooooooooooooo|xxxxx|x> YCL007C: kill: Smik Sbay - keep: YCL007C - Certain Kill. Kill (Smik Sbay) and Keep () Current total: Certain kills: 2/336 (0.6%). Conflicting: 0/336 (0.0%). NoInfo: 1/336 (0.3%). Certain keep: 333/336 (99.1%) ########################## YCL004W (1566bp = 522AA) has 7 hits (PGS1) 17 kDa phosphatidylglycerolphosphate synthase Spar (test2) orthologous hit at 90% f1566/1566 (100.0%) over 1566bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1554/1565 (99.3%) over 1566bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1542/1561 (98.8%) over 1565bp for offset 0 <== THIS IS REAL YCL004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/337 (0.6%). Conflicting: 0/337 (0.0%). NoInfo: 1/337 (0.3%). Certain keep: 334/337 (99.1%) ########################## YCL001W (567bp = 189AA) has 15 hits (RER1) Golgi protein involved in retention o..R proteins (93) Spar (test2) orthologous hit at 92% f567/567 (100.0%) over 567bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f567/567 (100.0%) over 567bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f567/567 (100.0%) over 567bp for offset 0 <== THIS IS REAL YCL001W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCL001W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/338 (0.6%). Conflicting: 0/338 (0.0%). NoInfo: 1/338 (0.3%). Certain keep: 335/338 (99.1%) ########################## YCR002C (969bp = 323AA) has 13 hits (CDC10) conserved potential GTP-ginding protein Spar (test2) orthologous hit at 93% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL YCR002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/339 (0.6%). Conflicting: 0/339 (0.0%). NoInfo: 1/339 (0.3%). Certain keep: 336/339 (99.1%) ########################## YCR003W (552bp = 184AA) has 11 hits (MRPL32) Mitochondrial ribosomal protein MRP..32 (YmL32) (91) Spar (test2) orthologous hit at 89% f552/552 (100.0%) over 552bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f548/551 (99.5%) over 552bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f537/550 (97.6%) over 552bp for offset 0 <== THIS IS REAL YCR003W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR003W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/340 (0.6%). Conflicting: 0/340 (0.0%). NoInfo: 1/340 (0.3%). Certain keep: 337/340 (99.1%) ########################## YCR004C (744bp = 248AA) has 11 hits (YCP4) FMN-binding protein Spar (test2) orthologous hit at 91% f743/744 (99.9%) over 744bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f743/744 (99.9%) over 744bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f737/740 (99.6%) over 744bp for offset 0 <== THIS IS REAL YCR004C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR004C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/341 (0.6%). Conflicting: 0/341 (0.0%). NoInfo: 1/341 (0.3%). Certain keep: 338/341 (99.1%) ########################## YCR005C (1383bp = 461AA) has 12 hits (CIT2) non-mitochondrial citrate synthase Spar (test2) orthologous hit at 91% f1383/1383 (100.0%) over 1383bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1382/1382 (100.0%) over 1382bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1380/1382 (99.9%) over 1383bp for offset 0 <== THIS IS REAL YCR005C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR005C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/342 (0.6%). Conflicting: 0/342 (0.0%). NoInfo: 1/342 (0.3%). Certain keep: 339/342 (99.1%) ########################## YCR008W (1812bp = 604AA) has 75 hits (SAT4) Ser/Thr protein kinase Spar (test2) orthologous hit at 91% f1811/1811 (100.0%) over 1811bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1804/1810 (99.7%) over 1812bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f927/927 (100.0%) over 927bp for offset 0 <== THIS IS REAL YCR008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/343 (0.6%). Conflicting: 0/343 (0.0%). NoInfo: 1/343 (0.3%). Certain keep: 340/343 (99.1%) ########################## YCR009C (798bp = 266AA) has 7 hits (RVS161) Reduced viability on starvation protein RVS161 Spar (test2) orthologous hit at 93% f798/798 (100.0%) over 798bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f794/797 (99.6%) over 798bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f798/798 (100.0%) over 798bp for offset 0 <== THIS IS REAL YCR009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/344 (0.6%). Conflicting: 0/344 (0.0%). NoInfo: 1/344 (0.3%). Certain keep: 341/344 (99.1%) ########################## YCR010C (852bp = 284AA) has 20 hits (ADY2) Protein involved in Accumulation of DYads Spar (test2) orthologous hit at 91% f852/852 (100.0%) over 852bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f852/852 (100.0%) over 852bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f852/852 (100.0%) over 852bp for offset 0 <== THIS IS REAL YCR010C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR010C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/345 (0.6%). Conflicting: 0/345 (0.0%). NoInfo: 1/345 (0.3%). Certain keep: 342/345 (99.1%) ########################## YCR011C (3150bp = 1050AA) has 46 hits (ADP1) Active transport ATPase Spar (test2) orthologous hit at 91% f3150/3150 (100.0%) over 3150bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3150/3150 (100.0%) over 3150bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2023/2135 (94.8%) over 2148bp for offset 2 <== THIS IS REAL YCR011C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR011C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/346 (0.6%). Conflicting: 0/346 (0.0%). NoInfo: 1/346 (0.3%). Certain keep: 343/346 (99.1%) ########################## YCR012W (1251bp = 417AA) has 7 hits (PGK1) 3-phosphoglycerate kinase Flanking ORFs are: YCR010C and YCR012W. YCR012W skipped ########################## YCR014C (1749bp = 583AA) has 43 hits (POL4) DNA polymerase IV Spar (test2) orthologous hit at 87% f1723/1743 (98.9%) over 1749bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1699/1738 (97.8%) over 1749bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1665/1737 (95.9%) over 1749bp for offset 0 <== THIS IS REAL YCR014C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR014C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/347 (0.6%). Conflicting: 0/347 (0.0%). NoInfo: 1/347 (0.3%). Certain keep: 344/347 (99.1%) ########################## YCR017C (2862bp = 954AA) has 9 hits (CWH43) Spar (test2) orthologous hit at 90% f2849/2860 (99.6%) over 2862bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2824/2857 (98.8%) over 2862bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2806/2854 (98.3%) over 2861bp for offset 2 <== THIS IS REAL YCR017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/348 (0.6%). Conflicting: 0/348 (0.0%). NoInfo: 1/348 (0.3%). Certain keep: 345/348 (99.1%) ########################## YCR018C (666bp = 222AA) has 11 hits (SRD1) Transcription regulator Spar (test2) orthologous hit at 85% f617/666 (92.6%) over 666bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 75% f653/664 (98.3%) over 666bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f606/656 (92.4%) over 662bp for offset 1 <== THIS IS REAL YCR018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/349 (0.6%). Conflicting: 0/349 (0.0%). NoInfo: 1/349 (0.3%). Certain keep: 346/349 (99.1%) ########################## YCR019W (1092bp = 364AA) has 5 hits (MAK32) MAK32 sugar kinase Spar (test2) orthologous hit at 87% f1083/1088 (99.5%) over 1092bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1062/1084 (98.0%) over 1086bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1090/1092 (99.8%) over 1092bp for offset 0 <== THIS IS REAL YCR019W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR019W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/350 (0.6%). Conflicting: 0/350 (0.0%). NoInfo: 1/350 (0.3%). Certain keep: 347/350 (99.1%) ########################## YCR020C (648bp = 216AA) has 6 hits (PET18) Transcription regulator Spar (test2) orthologous hit at 90% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f643/646 (99.5%) over 647bp for offset 0 <== THIS IS REAL YCR020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/351 (0.6%). Conflicting: 0/351 (0.0%). NoInfo: 1/351 (0.3%). Certain keep: 348/351 (99.1%) ########################## YCR020C-A (267bp = 89AA) has 6 hits (MAK31) MAK31 snRNP Spar (test2) orthologous hit at 90% f267/267 (100.0%) over 267bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f257/266 (96.6%) over 267bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f267/267 (100.0%) over 267bp for offset 0 <== THIS IS REAL YCR020C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR020C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/352 (0.6%). Conflicting: 0/352 (0.0%). NoInfo: 1/352 (0.3%). Certain keep: 349/352 (99.1%) ########################## YCR020W-B (237bp = 79AA) has 58 hits (HTL1) high-temperature lethal Spar (test2) orthologous hit at 93% f237/237 (100.0%) over 237bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f233/235 (99.1%) over 236bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f232/236 (98.3%) over 237bp for offset 0 <== THIS IS REAL YCR020W-B: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR020W-B - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/353 (0.6%). Conflicting: 0/353 (0.0%). NoInfo: 1/353 (0.3%). Certain keep: 350/353 (99.2%) ########################## YCR021C (999bp = 333AA) has 11 hits (HSP30) Protein induced by heat shock, ethan..a membrane (153) Spar (test2) orthologous hit at 90% f999/999 (100.0%) over 999bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f999/999 (100.0%) over 999bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f971/989 (98.2%) over 991bp for offset 2 <== THIS IS REAL YCR021C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR021C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/354 (0.6%). Conflicting: 0/354 (0.0%). NoInfo: 1/354 (0.3%). Certain keep: 351/354 (99.2%) ########################## YCR024C-A (123bp = 41AA) has 35 hits (PMP1) Proteolipid associated with plasma m..se (Pma1p) (107) Spar (test2) orthologous hit at 98% f123/123 (100.0%) over 123bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f122/122 (100.0%) over 122bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f123/123 (100.0%) over 123bp for offset 0 <== THIS IS REAL YCR024C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR024C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/355 (0.6%). Conflicting: 0/355 (0.0%). NoInfo: 1/355 (0.3%). Certain keep: 352/355 (99.2%) ########################## YCR027C (630bp = 210AA) has 7 hits (RHB1) GTP-binding protein, ras family Spar (test2) orthologous hit at 89% f630/630 (100.0%) over 630bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f630/630 (100.0%) over 630bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f606/610 (99.3%) over 612bp for offset 0 <== THIS IS REAL YCR027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/356 (0.6%). Conflicting: 0/356 (0.0%). NoInfo: 1/356 (0.3%). Certain keep: 353/356 (99.2%) ########################## YCR028C (1539bp = 513AA) has 29 hits (FEN2) Amino acid permease Spar (test2) orthologous hit at 89% f1539/1539 (100.0%) over 1539bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1499/1532 (97.8%) over 1537bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1465/1486 (98.6%) over 1492bp for offset 0 <== THIS IS REAL YCR028C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR028C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/357 (0.6%). Conflicting: 0/357 (0.0%). NoInfo: 1/357 (0.3%). Certain keep: 354/357 (99.2%) ########################## YCR032W (6504bp = 2168AA) has 35 hits (BPH1) (putative) acetic acid export pump Spar (test2) orthologous hit at 88% f6500/6503 (100.0%) over 6504bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f6417/6482 (99.0%) over 6504bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1143/1205 (94.9%) over 1206bp for offset 0 <== THIS IS REAL YCR032W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR032W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/358 (0.6%). Conflicting: 0/358 (0.0%). NoInfo: 1/358 (0.3%). Certain keep: 355/358 (99.2%) ########################## YCR033W (3681bp = 1227AA) has 60 hits (SNT1) Spar (test2) orthologous hit at 87% f3659/3677 (99.5%) over 3681bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f3514/3642 (96.5%) over 3670bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2623/2688 (97.6%) over 2696bp for offset 0 <== THIS IS REAL YCR033W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR033W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/359 (0.6%). Conflicting: 0/359 (0.0%). NoInfo: 1/359 (0.3%). Certain keep: 356/359 (99.2%) ########################## YCR034W (1044bp = 348AA) has 15 hits (FEN1) Probable subunit of 1,3-beta-glucan ..og of ELO1 (105) Spar (test2) orthologous hit at 94% f1044/1044 (100.0%) over 1044bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1044/1044 (100.0%) over 1044bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1044/1044 (100.0%) over 1044bp for offset 0 <== THIS IS REAL YCR034W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR034W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/360 (0.6%). Conflicting: 0/360 (0.0%). NoInfo: 1/360 (0.3%). Certain keep: 357/360 (99.2%) ########################## YCR035C (1185bp = 395AA) has 15 hits (RRP43) Component of the exosome 3->5 exori.. (Rrp44p). (145) Spar (test2) orthologous hit at 88% f1182/1182 (100.0%) over 1185bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1181/1182 (99.9%) over 1185bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1179/1181 (99.8%) over 1185bp for offset 0 <== THIS IS REAL YCR035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/361 (0.6%). Conflicting: 0/361 (0.0%). NoInfo: 1/361 (0.3%). Certain keep: 358/361 (99.2%) ########################## YCR036W (1002bp = 334AA) has 6 hits (RBK1) ribokinase Spar (test2) orthologous hit at 86% f989/989 (100.0%) over 989bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f976/989 (98.7%) over 991bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f989/1001 (98.8%) over 1002bp for offset 0 <== THIS IS REAL YCR036W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR036W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/362 (0.6%). Conflicting: 0/362 (0.0%). NoInfo: 1/362 (0.3%). Certain keep: 359/362 (99.2%) ########################## YCR037C (2772bp = 924AA) has 30 hits (PHO87) phosphate permease Spar (test2) orthologous hit at 90% f2759/2771 (99.6%) over 2772bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1788/1843 (97.0%) over 1844bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2730/2758 (99.0%) over 2772bp for offset 0 <== THIS IS REAL YCR037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/363 (0.6%). Conflicting: 0/363 (0.0%). NoInfo: 1/363 (0.3%). Certain keep: 360/363 (99.2%) ########################## YCR038C (1929bp = 643AA) has 23 hits (BUD5) GTP/GDP exchange factor for Rsr1 protein . YCR038C skipped ########################## YCR039C (633bp = 211AA) has 23 hits (MATALPHA2) Mating type protein alpha-2 . YCR039C skipped ########################## YCR040W (528bp = 176AA) has 16 hits (MATALPHA1) transcription factor involved in..ific genes (119) . YCR040W skipped ########################## YCR042C (4224bp = 1408AA) has 301 hits (TAF2) TATA binding protein-associated factor (TAF) . YCR042C skipped ########################## YCR044C (1074bp = 358AA) has 7 hits (PER1) Protein Processing in the ER Spar (test2) orthologous hit at 89% f1074/1074 (100.0%) over 1074bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1074/1074 (100.0%) over 1074bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1068/1072 (99.6%) over 1074bp for offset 0 <== THIS IS REAL YCR044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/364 (0.5%). Conflicting: 0/364 (0.0%). NoInfo: 1/364 (0.3%). Certain keep: 361/364 (99.2%) ########################## YCR046C (510bp = 170AA) has 5 hits (IMG1) mitochondrial ribosomal protein Spar (test2) orthologous hit at 89% f509/509 (100.0%) over 509bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f509/509 (100.0%) over 509bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f490/506 (96.8%) over 507bp for offset 0 <== THIS IS REAL YCR046C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR046C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/365 (0.5%). Conflicting: 0/365 (0.0%). NoInfo: 1/365 (0.3%). Certain keep: 362/365 (99.2%) ########################## YCR047C (828bp = 276AA) has 6 hits (BUD23) Spar (test2) orthologous hit at 92% f827/827 (100.0%) over 827bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f828/828 (100.0%) over 828bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f823/825 (99.8%) over 826bp for offset 0 <== THIS IS REAL YCR047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/366 (0.5%). Conflicting: 0/366 (0.0%). NoInfo: 1/366 (0.3%). Certain keep: 363/366 (99.2%) ########################## YCR048W (1833bp = 611AA) has 13 hits (ARE1) Acyl-CoA cholesterol acyltransferase..ynthetase) (106) . YCR048W skipped ########################## YCR052W (1452bp = 484AA) has 7 hits (RSC6) subunit of chromatin remodeling complex Spar (test2) orthologous hit at 81% f1279/1434 (89.2%) over 1452bp for offset 0 Spar (test3) Longest island has f99 at 87% over 898bp <== THIS IS REAL Smik (test2) orthologous hit at 80% f864/864 (100.0%) over 864bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f871/887 (98.2%) over 897bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|______|_____|_____|_____|_____|______|_____|_____|_____|___| 99f 87% 898bp 97f 86% 347bp Sp89full |======================================================>..............|===================|> YCR052W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR052W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/367 (0.5%). Conflicting: 0/367 (0.0%). NoInfo: 1/367 (0.3%). Certain keep: 364/367 (99.2%) ########################## YCR053W (1545bp = 515AA) has 5 hits (THR4) threonine synthase Spar (test2) orthologous hit at 92% f1545/1545 (100.0%) over 1545bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1545/1545 (100.0%) over 1545bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1540/1544 (99.7%) over 1545bp for offset 0 <== THIS IS REAL YCR053W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR053W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/368 (0.5%). Conflicting: 0/368 (0.0%). NoInfo: 1/368 (0.3%). Certain keep: 365/368 (99.2%) ########################## YCR054C (1692bp = 564AA) has 11 hits (CTR86) CTR86 shares a terminator region wi..synthesis. (188) Spar (test2) orthologous hit at 88% f1692/1692 (100.0%) over 1692bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1662/1687 (98.5%) over 1690bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1634/1672 (97.7%) over 1678bp for offset 0 <== THIS IS REAL YCR054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/369 (0.5%). Conflicting: 0/369 (0.0%). NoInfo: 1/369 (0.3%). Certain keep: 366/369 (99.2%) ########################## YCR057C (2772bp = 924AA) has 34 hits (PWP2) regulatory protein Spar (test2) orthologous hit at 91% f2652/2679 (99.0%) over 2685bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2661/2681 (99.3%) over 2689bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2667/2746 (97.1%) over 2758bp for offset 1 <== THIS IS REAL YCR057C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR057C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/370 (0.5%). Conflicting: 0/370 (0.0%). NoInfo: 1/370 (0.3%). Certain keep: 367/370 (99.2%) ########################## YCR059C (777bp = 259AA) has 3 hits (YIH1) Spar (test2) orthologous hit at 91% f777/777 (100.0%) over 777bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f777/777 (100.0%) over 777bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f772/775 (99.6%) over 776bp for offset 0 <== THIS IS REAL YCR059C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR059C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/371 (0.5%). Conflicting: 0/371 (0.0%). NoInfo: 1/371 (0.3%). Certain keep: 368/371 (99.2%) ########################## YCR063W (474bp = 158AA) has 6 hits (BUD31) Flanking ORFs are: YCR057C and YCR060W. YCR063W skipped ########################## YCR065W (1695bp = 565AA) has 9 hits (HCM1) Transcription factor (fork head domain) Spar (test2) orthologous hit at 90% f1695/1695 (100.0%) over 1695bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1614/1651 (97.8%) over 1658bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1510/1667 (90.6%) over 1691bp for offset 0 <== THIS IS REAL YCR065W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR065W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/372 (0.5%). Conflicting: 0/372 (0.0%). NoInfo: 1/372 (0.3%). Certain keep: 369/372 (99.2%) ########################## YCR066W (1464bp = 488AA) has 11 hits (RAD18) Zn finger protein, putative ATPase Spar (test2) orthologous hit at 87% f1452/1462 (99.3%) over 1464bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1432/1457 (98.3%) over 1464bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1432/1452 (98.6%) over 1464bp for offset 0 <== THIS IS REAL YCR066W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR066W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/373 (0.5%). Conflicting: 0/373 (0.0%). NoInfo: 1/373 (0.3%). Certain keep: 370/373 (99.2%) ########################## YCR067C (3198bp = 1066AA) has 113 hits (SED4) Intracellular transport protein Spar (test2) orthologous hit at 80% f1666/1791 (93.0%) over 1803bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 69% f1889/2318 (81.5%) over 2379bp for offset 0 Smik (test3) Longest island has f99 at 81% over 1433bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1679/1917 (87.6%) over 1951bp for offset 0 Sbay (test3) Longest island has f96 at 77% over 1486bp <== THIS IS REAL 0 100200300400506007008009001k1k 1k 1k 1k 1k 1k1k 1k 1k 2k 2k2k 2k 2k 2k 2k2k 2k 2k 3k 3k 3k |_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|__| 99f 81% 1433bp Sm1224ful |=======================================>.........................> | 96f 77% 1486bp Sb91full |========================================>............> | YCR067C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR067C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/374 (0.5%). Conflicting: 0/374 (0.0%). NoInfo: 1/374 (0.3%). Certain keep: 371/374 (99.2%) ########################## YCR068W (1563bp = 521AA) has 4 hits (CVT17) lipase (putative) Spar (test2) orthologous hit at 88% f1559/1560 (99.9%) over 1563bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1547/1558 (99.3%) over 1563bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1525/1555 (98.1%) over 1563bp for offset 0 <== THIS IS REAL YCR068W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR068W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/375 (0.5%). Conflicting: 0/375 (0.0%). NoInfo: 1/375 (0.3%). Certain keep: 372/375 (99.2%) ########################## YCR069W (957bp = 319AA) has 17 hits (CPR4) cyclophilin homolog Spar (test2) orthologous hit at 87% f936/954 (98.1%) over 957bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f938/954 (98.3%) over 957bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f921/951 (96.8%) over 957bp for offset 0 <== THIS IS REAL YCR069W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR069W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/376 (0.5%). Conflicting: 0/376 (0.0%). NoInfo: 1/376 (0.3%). Certain keep: 373/376 (99.2%) ########################## YCR071C (441bp = 147AA) has 5 hits (IMG2) similar to Drosophila gonadal protein ..maitenance (126) Spar (test2) orthologous hit at 90% f441/441 (100.0%) over 441bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f441/441 (100.0%) over 441bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f431/440 (98.0%) over 441bp for offset 0 <== THIS IS REAL YCR071C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR071C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/377 (0.5%). Conflicting: 0/377 (0.0%). NoInfo: 1/377 (0.3%). Certain keep: 374/377 (99.2%) ########################## YCR073C (3996bp = 1332AA) has 63 hits (SSK22) protein kinase Spar (test2) orthologous hit at 86% f3682/3692 (99.7%) over 3695bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f3874/3969 (97.6%) over 3989bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f3057/3152 (97.0%) over 3175bp for offset 0 <== THIS IS REAL YCR073C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR073C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/378 (0.5%). Conflicting: 0/378 (0.0%). NoInfo: 1/378 (0.3%). Certain keep: 375/378 (99.2%) ########################## YCR073W-A (948bp = 316AA) has 11 hits (SOL2) shows similarity to glucose-6-phosp.. and Sol3p (151) Spar (test2) orthologous hit at 92% f948/948 (100.0%) over 948bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f948/948 (100.0%) over 948bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f728/728 (100.0%) over 728bp for offset 0 <== THIS IS REAL YCR073W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR073W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/379 (0.5%). Conflicting: 0/379 (0.0%). NoInfo: 1/379 (0.3%). Certain keep: 376/379 (99.2%) ########################## YCR075C (783bp = 261AA) has 4 hits (ERS1) ERS1 protein, ER defect supressor Spar (test2) orthologous hit at 90% f781/781 (100.0%) over 781bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f782/782 (100.0%) over 782bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f768/779 (98.6%) over 783bp for offset 0 <== THIS IS REAL YCR075C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR075C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/380 (0.5%). Conflicting: 0/380 (0.0%). NoInfo: 1/380 (0.3%). Certain keep: 377/380 (99.2%) ########################## YCR077C (2391bp = 797AA) has 13 hits (PAT1) Necessary for accurate chromosome tr..uring cell (102) Spar (test2) orthologous hit at 90% f2194/2223 (98.7%) over 2232bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2036/2134 (95.4%) over 2153bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1885/1894 (99.5%) over 1896bp for offset 0 <== THIS IS REAL YCR077C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR077C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/381 (0.5%). Conflicting: 0/381 (0.0%). NoInfo: 1/381 (0.3%). Certain keep: 378/381 (99.2%) ########################## YCR081W (4284bp = 1428AA) has 43 hits (SRB8) RNA polymerase II mediator subunit Spar (test2) orthologous hit at 89% f4060/4085 (99.4%) over 4088bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f4013/4024 (99.7%) over 4027bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f3401/3824 (88.9%) over 3866bp for offset 0 Sbay (test3) Longest island has f98 at 81% over 3361bp <== THIS IS REAL 0 10203040506070809001k1k1k1k1k1k1k1k1k1k 2k2k2k2k2k2k2k2k2k2k 3k3k3k3k3k3k3k3k3k3k 4k4k4k4k |_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|__|_|_|_| 98f 81% 3361bp Sb91full |=====================================================================>..........> | YCR081W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR081W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/382 (0.5%). Conflicting: 0/382 (0.0%). NoInfo: 1/382 (0.3%). Certain keep: 379/382 (99.2%) ########################## YCR083W (384bp = 128AA) has 13 hits (TRX3) mitochondrial thioredoxin Spar (test2) orthologous hit at 91% f384/384 (100.0%) over 384bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f384/384 (100.0%) over 384bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f383/383 (100.0%) over 383bp for offset 0 <== THIS IS REAL YCR083W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR083W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/383 (0.5%). Conflicting: 0/383 (0.0%). NoInfo: 1/383 (0.3%). Certain keep: 380/383 (99.2%) ########################## YCR084C (2142bp = 714AA) has 431 hits (TUP1) glucose repression regulatory prote..G proteins (134) Spar (test2) orthologous hit at 92% f2142/2142 (100.0%) over 2142bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1628/1823 (89.3%) over 1846bp for offset 0 Smik (test3) Longest island has f99 at 88% over 1397bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1702/1836 (92.7%) over 1857bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k2k |___|___|___|___|____|___|___|___|___|____|___|___|___|___|____|___|___|___|___|____|___|_| 99f 88% 1397bp Sm1224ful |...................|=========================================================| YCR084C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR084C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/384 (0.5%). Conflicting: 0/384 (0.0%). NoInfo: 1/384 (0.3%). Certain keep: 381/384 (99.2%) ########################## YCR086W (573bp = 191AA) has 3 hits (CSM1) Hypothetical ORF Spar (test2) non-orthologous hit at 92% f573/573 (100.0%) over 573bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f572/572 (100.0%) over 572bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f573/573 (100.0%) over 573bp for offset 0 <== THIS IS REAL YCR086W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR086W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/385 (0.5%). Conflicting: 0/385 (0.0%). NoInfo: 1/385 (0.3%). Certain keep: 382/385 (99.2%) ########################## YCR088W (1779bp = 593AA) (tdist=48.5k) has 57 hits (ABP1) Actin binding protein Spar (test2) orthologous hit at 90% f1776/1776 (100.0%) over 1779bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1767/1773 (99.7%) over 1779bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f883/917 (96.3%) over 930bp for offset 0 <== THIS IS REAL YCR088W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR088W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/386 (0.5%). Conflicting: 0/386 (0.0%). NoInfo: 1/386 (0.3%). Certain keep: 383/386 (99.2%) ########################## YCR089W (4830bp = 1610AA) (tdist=43.0k) has 283 hits (FIG2) predicted GPI-anchor..ll protein (100) Spar (test2) orthologous hit at 66% f1591/2018 (78.8%) over 2079bp for offset 0 Spar (test3) Longest island has f98 at 80% over 1090bp <== THIS IS REAL Smik (test2) orthologous hit at 79% f776/798 (97.2%) over 803bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f696/853 (81.6%) over 877bp for offset 0 Sbay (test3) Longest island has f95 at 78% over 618bp <== THIS IS REAL 0102030405060780901k1k1k1k11k1k1k1k1k2k22k2k2k2k2k2k2k23k3k3k3k3k3k33k3k3k4k4k4k44k4k4k4k44k ||_|_|_|_|_|_||_|_|_|_|_|_||_|_|_|_|_|_||_|_|_|_|_|_|_||_|_|_|_|_|_||_|_|_|_|_|_||_|_|_|_|| 98f 80% 1090bp 80f 54% 206bp Sp90full |...|===================>....|===>....> | 95f 78% 618bSb609brk |....|===========| YCR089W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR089W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/387 (0.5%). Conflicting: 0/387 (0.0%). NoInfo: 1/387 (0.3%). Certain keep: 384/387 (99.2%) ########################## YCR091W (2163bp = 721AA) (tdist=38.7k) has 82 hits (KIN82) Putative serine/threo.. subfamily (203) Spar (test2) orthologous hit at 87% f2140/2162 (99.0%) over 2163bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2131/2158 (98.7%) over 2163bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2073/2153 (96.3%) over 2163bp for offset 1 <== THIS IS REAL YCR091W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR091W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/388 (0.5%). Conflicting: 0/388 (0.0%). NoInfo: 1/388 (0.3%). Certain keep: 385/388 (99.2%) ########################## YCR092C (3144bp = 1048AA) (tdist=35.4k) has 35 hits (MSH3) mutS homolog, forms a..n mispairs (205) Spar (test2) orthologous hit at 87% f3083/3138 (98.2%) over 3144bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2825/2851 (99.1%) over 2858bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2849/2863 (99.5%) over 2867bp for offset 0 <== THIS IS REAL YCR092C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR092C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/389 (0.5%). Conflicting: 0/389 (0.0%). NoInfo: 1/389 (0.3%). Certain keep: 386/389 (99.2%) ########################## YCR093W (6327bp = 2109AA) (tdist=28.9k) has 335 hits (CDC39) nuclear protein tha..nscription (122) Spar (test2) orthologous hit at 90% f6319/6326 (99.9%) over 6327bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3963/3984 (99.5%) over 3994bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3114/3174 (98.1%) over 3181bp for offset 2 <== THIS IS REAL YCR093W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR093W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/390 (0.5%). Conflicting: 0/390 (0.0%). NoInfo: 1/390 (0.3%). Certain keep: 387/390 (99.2%) ########################## YCR094W (1176bp = 392AA) (tdist=27.4k) has 24 hits (CDC50) involved in cell cycle Spar (test2) orthologous hit at 90% f1172/1172 (100.0%) over 1175bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1171/1172 (99.9%) over 1175bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1165/1172 (99.4%) over 1176bp for offset 0 <== THIS IS REAL YCR094W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR094W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/391 (0.5%). Conflicting: 0/391 (0.0%). NoInfo: 1/391 (0.3%). Certain keep: 388/391 (99.2%) ########################## YCR096C (360bp = 120AA) (tdist=21.8k) has 20 hits (HMRA2) Regulatory protein MAT..MATalpha2p (164) Spar (test2) orthologous hit at 100% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 100% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 100% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL YCR096C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR096C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/392 (0.5%). Conflicting: 0/392 (0.0%). NoInfo: 1/392 (0.3%). Certain keep: 389/392 (99.2%) ########################## YCR098C (1557bp = 519AA) (tdist=16.7k) has 8 hits (GIT1) permease involved in th.. (GroPIns) (124) Spar (test2) non-orthologous hit at 92% f1557/1557 (100.0%) over 1557bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1557/1557 (100.0%) over 1557bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 86% f1554/1556 (99.9%) over 1557bp for offset 0 <== THIS IS REAL YCR098C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR098C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/393 (0.5%). Conflicting: 0/393 (0.0%). NoInfo: 1/393 (0.3%). Certain keep: 390/393 (99.2%) ########################## YCR104W (375bp = 125AA) (tdist=7.1k) has 137 hits (PAU3) similar to bovine alcoh..ydrogenase (96) Spar (test2) orthologous hit at 89% f375/375 (100.0%) over 375bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f241/372 (64.8%) over 374bp for offset 1 Smik (test3) Longest island has f100 at 89% over 241bp Smik (test2) non-orthologous hit at 87% f375/375 (100.0%) over 375bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 90% f375/375 (100.0%) over 375bp for offset 0 <== THIS IS REAL 0 100 200 300 375 |_______________________|_______________________|_______________________|_________________| 100f 89% 241bp Sm1full |=========================================================>..............................>| YCR104W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR104W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/394 (0.5%). Conflicting: 0/394 (0.0%). NoInfo: 1/394 (0.3%). Certain keep: 391/394 (99.2%) ########################## YCR106W (2499bp = 833AA) (tdist=1.8k) has 24 hits (RDS1) transcriptional regulator Spar (test2) orthologous hit at 85% f2478/2493 (99.4%) over 2499bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 76% f1346/1387 (97.0%) over 1392bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 56% f859/1277 (67.3%) over 1333bp for offset 0 Sbay (test3) Longest island has f78 at 55% over 159bp Sbay (test2) non-orthologous hit at 55% f413/531 (77.8%) over 544bp for offset 2 Sbay (test3) Longest island has f88 at 57% over 252bp Sbay (test2) non-orthologous hit at 54% f158/452 (35.0%) over 478bp for offset 2 Sbay (test3) Longest island has f76 at 50% over 82bp 0 100 200300 400 500600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k |__|___|__|___|___|__|___|__|___|___|__|___|__|___|___|__|___|__|___|___|__|___|__|___|___| 100f 5684f 78f 55%87f 6177f 67% 11489f 58% 142bp Sb223full |===>..|==>|=====>|===>.|===>......|=====>......>| 88f 57% 25100100f93f Sb68full |xxxxxxxx>|xx|x>.|x> | 8577f 576f828981f 48% 42bp Sb185full |=|xx>.|o>|x|>|=>> | YCR106W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YCR106W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/395 (0.5%). Conflicting: 0/395 (0.0%). NoInfo: 1/395 (0.3%). Certain keep: 392/395 (99.2%) ########################## YCR107W (1092bp = 364AA) (tdist=365) has 15 hits (AAD3) Hypothetical aryl-alcoho..nase (AAD) (101) Spar (test2) orthologous hit at 84% f692/858 (80.7%) over 861bp for offset 2 Spar (test3) Longest island has f99 at 86% over 697bp <== THIS IS REAL Smik (test2) non-orthologous hit at 77% f1018/1030 (98.8%) over 1033bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 76% f1022/1045 (97.8%) over 1048bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|_______|________|_______|_______|_______|________|_______|_______| 99f 86% 697bp Sp450full |xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>...........>| YCR107W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YCR107W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/396 (0.5%). Conflicting: 0/396 (0.0%). NoInfo: 1/396 (0.3%). Certain keep: 393/396 (99.2%) ########################## YDL248W (1152bp = 384AA) (tdist=1.8k) has 71 hits (COS7) similar to other subtel..d proteins (107) Spar (test2) non-orthologous hit at 81% f1120/1142 (98.1%) over 1152bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 76% f1060/1138 (93.1%) over 1152bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 65% f558/1128 (49.5%) over 1150bp for offset 2 Sbay (test3) Longest island has f94 at 67% over 387bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|______|_______|_______|_______|_______|______|____| 94f 67% 387bp 95f 70% 378bp Sb206full |.......................|=============================>......|xxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YDL248W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL248W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/397 (0.5%). Conflicting: 0/397 (0.0%). NoInfo: 1/397 (0.3%). Certain keep: 394/397 (99.2%) ########################## YDL245C (1704bp = 568AA) (tdist=11.6k) has 96 hits (HXT15) Hexose transporter Spar (test2) orthologous hit at 85% f1704/1704 (100.0%) over 1704bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 66% f1330/1488 (89.4%) over 1517bp for offset 1 Smik (test3) Longest island has f92 at 67% over 1373bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 64% f1327/1588 (83.6%) over 1623bp for offset 1 Sbay (test3) Longest island has f91 at 67% over 818bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 11k |____|____|____|_____|____|____|____|_____|____|____|_____|____|____|____|_____|____|____|| 92f 67% 1373bp Sm364full |......|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo> | 88f 64% 532bp 91f 67% 818bp Sb447full |...........|xxxxxxxxxxxxxxxxxxxxxxxxxxx|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.>| YDL245C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL245C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/398 (0.5%). Conflicting: 0/398 (0.0%). NoInfo: 1/398 (0.3%). Certain keep: 395/398 (99.2%) ########################## YDL244W (1023bp = 341AA) (tdist=16.2k) has 30 hits (THI13) Product of gene unknown Spar (test2) orthologous hit at 93% f498/498 (100.0%) over 498bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 90% f758/758 (100.0%) over 758bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 88% f1015/1021 (99.4%) over 1023bp for offset 0 <== THIS IS REAL YDL244W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL244W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/399 (0.5%). Conflicting: 0/399 (0.0%). NoInfo: 1/399 (0.3%). Certain keep: 396/399 (99.2%) ########################## YDL243C (990bp = 330AA) (tdist=17.5k) has 14 hits (AAD4) Hypothetical aryl-alcoh..ydrogenase (96) Spar (test2) non-orthologous hit at 91% f983/985 (99.8%) over 986bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f980/984 (99.6%) over 986bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f986/988 (99.8%) over 989bp for offset 0 <== THIS IS REAL YDL243C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL243C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/400 (0.5%). Conflicting: 0/400 (0.0%). NoInfo: 1/400 (0.2%). Certain keep: 397/400 (99.3%) ########################## YDL240W (3054bp = 1018AA) (tdist=22.8k) has 8 hits (LRG1) Protein similar to LIM..f proteins (148) Spar (test2) orthologous hit at 90% f3043/3053 (99.7%) over 3054bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3049/3053 (99.9%) over 3054bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2995/3042 (98.5%) over 3051bp for offset 0 <== THIS IS REAL YDL240W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL240W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/401 (0.5%). Conflicting: 0/401 (0.0%). NoInfo: 1/401 (0.2%). Certain keep: 398/401 (99.3%) ########################## YDL239C (2373bp = 791AA) (tdist=26.4k) has 118 hits (ADY3) Protein involved in A..n of DYads (100) Spar (test2) orthologous hit at 86% f2357/2370 (99.5%) over 2373bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f2170/2215 (98.0%) over 2221bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1189/1311 (90.7%) over 1328bp for offset 0 <== THIS IS REAL YDL239C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL239C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/402 (0.5%). Conflicting: 0/402 (0.0%). NoInfo: 1/402 (0.2%). Certain keep: 399/402 (99.3%) ########################## YDL236W (939bp = 313AA) (tdist=32.2k) has 4 hits (PHO13) p-nitrophenyl phosphatase Spar (test2) orthologous hit at 89% f927/939 (98.7%) over 939bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f926/939 (98.6%) over 939bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f912/934 (97.6%) over 937bp for offset 0 <== THIS IS REAL YDL236W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL236W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/403 (0.5%). Conflicting: 0/403 (0.0%). NoInfo: 1/403 (0.2%). Certain keep: 400/403 (99.3%) ########################## YDL235C (504bp = 168AA) (tdist=33.4k) has 11 hits (YPD1) Two-component phosphore..termediate (96) Spar (test2) orthologous hit at 93% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL YDL235C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL235C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/404 (0.5%). Conflicting: 0/404 (0.0%). NoInfo: 1/404 (0.2%). Certain keep: 401/404 (99.3%) ########################## YDL234C (2241bp = 747AA) (tdist=34.2k) has 17 hits (GYP7) GTPase-activating protein Spar (test2) orthologous hit at 91% f2238/2238 (100.0%) over 2241bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2036/2056 (99.0%) over 2067bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2214/2234 (99.1%) over 2241bp for offset 0 <== THIS IS REAL YDL234C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL234C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/405 (0.5%). Conflicting: 0/405 (0.0%). NoInfo: 1/405 (0.2%). Certain keep: 402/405 (99.3%) ########################## YDL232W (111bp = 37AA) (tdist=38.4k) has 19 hits (OST4) 3.6-kDa protein, probabl..ne-located (98) Spar (test2) orthologous hit at 93% f111/111 (100.0%) over 111bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f111/111 (100.0%) over 111bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f111/111 (100.0%) over 111bp for offset 0 <== THIS IS REAL YDL232W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL232W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/406 (0.5%). Conflicting: 0/406 (0.0%). NoInfo: 1/406 (0.2%). Certain keep: 403/406 (99.3%) ########################## YDL231C (3378bp = 1126AA) (tdist=38.8k) has 8 hits (BRE4) contains several putat..ne domains (106) Spar (test2) orthologous hit at 90% f3378/3378 (100.0%) over 3378bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3366/3373 (99.8%) over 3377bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3335/3373 (98.9%) over 3377bp for offset 0 <== THIS IS REAL YDL231C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL231C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/407 (0.5%). Conflicting: 0/407 (0.0%). NoInfo: 1/407 (0.2%). Certain keep: 404/407 (99.3%) ########################## YDL230W (1008bp = 336AA) (tdist=42.7k) has 6 hits (PTP1) phosphotyrosine-specifi..hosphatase (101) Spar (test2) orthologous hit at 90% f1008/1008 (100.0%) over 1008bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1002/1007 (99.5%) over 1008bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1002/1007 (99.5%) over 1008bp for offset 0 <== THIS IS REAL YDL230W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL230W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/408 (0.5%). Conflicting: 0/408 (0.0%). NoInfo: 1/408 (0.2%). Certain keep: 405/408 (99.3%) ########################## YDL229W (1842bp = 614AA) (tdist=44.0k) has 61 hits (SSB1) cytoplasmic member of ..P70 family (96) Flanking ORFs are: YDL231C and YDL229W. YDL229W skipped ########################## YDL227C (1761bp = 587AA) (tdist=46.2k) has 3 hits (HO) Homothallic switching endonuclease Spar (test2) orthologous hit at 90% f1761/1761 (100.0%) over 1761bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1760/1760 (100.0%) over 1760bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1757/1760 (99.8%) over 1761bp for offset 0 <== THIS IS REAL YDL227C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL227C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/409 (0.5%). Conflicting: 0/409 (0.0%). NoInfo: 1/409 (0.2%). Certain keep: 406/409 (99.3%) ########################## YDL226C (1059bp = 353AA) has 6 hits (GCS1) ADP-ribosylation factor GTPase-activa.. (ARF GAP) (102) Spar (test2) orthologous hit at 90% f1059/1059 (100.0%) over 1059bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1055/1057 (99.8%) over 1058bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f950/963 (98.7%) over 964bp for offset 2 <== THIS IS REAL YDL226C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL226C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/410 (0.5%). Conflicting: 0/410 (0.0%). NoInfo: 1/410 (0.2%). Certain keep: 407/410 (99.3%) ########################## YDL225W (1656bp = 552AA) has 28 hits (SHS1) Septin homolog Spar (test2) orthologous hit at 90% f1656/1656 (100.0%) over 1656bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1656/1656 (100.0%) over 1656bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1640/1652 (99.3%) over 1656bp for offset 0 <== THIS IS REAL YDL225W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL225W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/411 (0.5%). Conflicting: 0/411 (0.0%). NoInfo: 1/411 (0.2%). Certain keep: 408/411 (99.3%) ########################## YDL224C (1950bp = 650AA) has 13 hits (WHI4) Possible RNA binding protein. Homolog of Whi3. Spar (test2) orthologous hit at 90% f1950/1950 (100.0%) over 1950bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1941/1949 (99.6%) over 1950bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1584/1613 (98.2%) over 1616bp for offset 0 <== THIS IS REAL YDL224C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL224C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/412 (0.5%). Conflicting: 0/412 (0.0%). NoInfo: 1/412 (0.2%). Certain keep: 409/412 (99.3%) ########################## YDL223C (3141bp = 1047AA) has 16 hits (HBT1) Hub1 target Spar (test2) orthologous hit at 74% f2329/2629 (88.6%) over 2670bp for offset 0 Spar (test3) Longest island has f98 at 82% over 1540bp <== THIS IS REAL Smik (test2) orthologous hit at 59% f913/1243 (73.5%) over 1292bp for offset 0 Smik (test3) Longest island has f95 at 72% over 374bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 64% f696/897 (77.6%) over 925bp for offset 0 Sbay (test3) Longest island has f92 at 70% over 345bp <== THIS IS REAL 0 100200300400500600708009001k 1k 1k 1k 1k1k 1k 1k 1k 1k 2k 2k 2k2k 2k 2k 2k 2k 2k 2k3k 3k3k |_|__|__|__|__|__|__|_|__|__|__|__|__|__|_|__|__|__|__|__|__|__|_|__|__|__|__|__|__|_|__|_| 98f 78% 577bp 98f 82% 1540bp Sp429full |.......|===============>.........|==========================================|> 95f 72% 374bp Sm195brk |..........................|oooooooooo> | 92f 70% 345b86f 68%Sb628brk |.......|ooooooooo>.|oooooo| YDL223C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL223C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/413 (0.5%). Conflicting: 0/413 (0.0%). NoInfo: 1/413 (0.2%). Certain keep: 410/413 (99.3%) ########################## YDL220C (2775bp = 925AA) has 8 hits (CDC13) binds to single-stranded TG1-3 telom..re G-tails (91) Flanking ORFs are: YDL224C and YDL222C. YDL220C skipped ########################## YDL217C (624bp = 208AA) has 8 hits (TIM22) Mitochondrial inner membrane protein .. in import (98) Spar (test2) orthologous hit at 78% f436/527 (82.7%) over 540bp for offset 0 Spar (test3) Longest island has f98 at 86% over 411bp <== THIS IS REAL Smik (test2) orthologous hit at 81% f435/480 (90.6%) over 482bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f620/622 (99.7%) over 622bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 624 |_____________|_____________|______________|_____________|______________|_____________|___| 98f 86% 411bp Sp429full |...................|=========================================================|=> YDL217C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL217C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/414 (0.5%). Conflicting: 0/414 (0.0%). NoInfo: 1/414 (0.2%). Certain keep: 411/414 (99.3%) ########################## YDL216C (1368bp = 456AA) has 16 hits (RRI1) Hypothetical ORF Spar (test2) orthologous hit at 87% f1348/1366 (98.7%) over 1368bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f882/959 (92.0%) over 968bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1300/1359 (95.7%) over 1365bp for offset 1 <== THIS IS REAL YDL216C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL216C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/415 (0.5%). Conflicting: 0/415 (0.0%). NoInfo: 1/415 (0.2%). Certain keep: 412/415 (99.3%) ########################## YDL215C (3279bp = 1093AA) has 14 hits (GDH2) NAD-dependent glutamate dehydrogenase Spar (test2) orthologous hit at 91% f3279/3279 (100.0%) over 3279bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3272/3278 (99.8%) over 3279bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f3279/3279 (100.0%) over 3279bp for offset 0 <== THIS IS REAL YDL215C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL215C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/416 (0.5%). Conflicting: 0/416 (0.0%). NoInfo: 1/416 (0.2%). Certain keep: 413/416 (99.3%) ########################## YDL214C (2100bp = 700AA) has 51 hits (PRR2) Spar (test2) orthologous hit at 87% f1882/1885 (99.8%) over 1891bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f2063/2091 (98.7%) over 2100bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1539/1559 (98.7%) over 1567bp for offset 0 <== THIS IS REAL YDL214C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL214C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/417 (0.5%). Conflicting: 0/417 (0.0%). NoInfo: 1/417 (0.2%). Certain keep: 414/417 (99.3%) ########################## YDL213C (678bp = 226AA) has 22 hits (FYV14) Hypothetical ORF Spar (test2) orthologous hit at 89% f675/675 (100.0%) over 678bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f672/675 (99.6%) over 678bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f678/678 (100.0%) over 678bp for offset 0 <== THIS IS REAL YDL213C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL213C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/418 (0.5%). Conflicting: 0/418 (0.0%). NoInfo: 1/418 (0.2%). Certain keep: 415/418 (99.3%) ########################## YDL212W (633bp = 211AA) has 6 hits (SHR3) Integral membrane component of the end.. reticulum (98) Spar (test2) orthologous hit at 90% f633/633 (100.0%) over 633bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f629/632 (99.5%) over 633bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f627/627 (100.0%) over 633bp for offset 0 <== THIS IS REAL YDL212W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL212W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/419 (0.5%). Conflicting: 0/419 (0.0%). NoInfo: 1/419 (0.2%). Certain keep: 416/419 (99.3%) ########################## YDL210W (1716bp = 572AA) has 10 hits (UGA4) GABA-specific transport protein Spar (test2) orthologous hit at 92% f1716/1716 (100.0%) over 1716bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1712/1715 (99.8%) over 1716bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f232/354 (65.5%) over 358bp for offset 2 Sbay (test3) Longest island has f92 at 81% over 253bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 11k |____|____|____|____|_____|____|____|____|_____|____|____|____|_____|____|____|____|_____|| 92f 81% 253bp95f 74% 107bp Sb822brk |============|xxxx> | YDL210W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDL210W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/420 (0.5%). Conflicting: 0/420 (0.0%). NoInfo: 1/420 (0.2%). Certain keep: 417/420 (99.3%) ########################## YDL209C (1020bp = 340AA) has 19 hits (CWC2) Protein required for cell viability Spar (test2) orthologous hit at 87% f1013/1020 (99.3%) over 1020bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1014/1019 (99.5%) over 1020bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f728/728 (100.0%) over 728bp for offset 0 <== THIS IS REAL YDL209C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL209C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/421 (0.5%). Conflicting: 0/421 (0.0%). NoInfo: 1/421 (0.2%). Certain keep: 418/421 (99.3%) ########################## YDL208W (522bp = 174AA) has 13 hits (NHP2) HMG-like nuclear protein Spar (test2) orthologous hit at 91% f522/522 (100.0%) over 522bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f512/514 (99.6%) over 515bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f260/515 (50.5%) over 515bp for offset 0 Sbay (test3) Longest island has f100 at 88% over 252bp 0 100 200 300 400 500 522 |________________|________________|________________|________________|_________________|___| 100f 88% 241bp 100f 88% 252bp Sb841full |...|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|==========================================| YDL208W: kill: Sbay - keep: Spar Smik YDL208W - Conflicting. Kill (Sbay) and Keep (Spar Smik) Current total: Certain kills: 2/422 (0.5%). Conflicting: 1/422 (0.2%). NoInfo: 1/422 (0.2%). Certain keep: 418/422 (99.1%) ########################## YDL207W (1617bp = 539AA) has 206 hits (GLE1) Nuclear-export-signal (NES)-contain..ng protein (91) Spar (test2) orthologous hit at 89% f1614/1616 (99.9%) over 1617bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1518/1591 (95.4%) over 1600bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1593/1612 (98.8%) over 1615bp for offset 0 <== THIS IS REAL YDL207W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL207W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/423 (0.5%). Conflicting: 1/423 (0.2%). NoInfo: 1/423 (0.2%). Certain keep: 419/423 (99.1%) ########################## YDL205C (984bp = 328AA) has 5 hits (HEM3) phorphobilinogen deaminase (uroporphyr..osynthesis (133) Spar (test2) orthologous hit at 91% f984/984 (100.0%) over 984bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f984/984 (100.0%) over 984bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f980/983 (99.7%) over 984bp for offset 0 <== THIS IS REAL YDL205C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL205C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/424 (0.5%). Conflicting: 1/424 (0.2%). NoInfo: 1/424 (0.2%). Certain keep: 420/424 (99.1%) ########################## YDL202W (750bp = 250AA) has 5 hits (MRPL11) Mitochondrial ribosomal protein MRPL11 (YmL11) Spar (test2) orthologous hit at 88% f750/750 (100.0%) over 750bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f750/750 (100.0%) over 750bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f439/444 (98.9%) over 445bp for offset 0 <== THIS IS REAL YDL202W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL202W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/425 (0.5%). Conflicting: 1/425 (0.2%). NoInfo: 1/425 (0.2%). Certain keep: 421/425 (99.1%) ########################## YDL201W (861bp = 287AA) has 9 hits (TRM8) tRNA methyltransferase Spar (test2) orthologous hit at 92% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f857/860 (99.7%) over 861bp for offset 0 <== THIS IS REAL YDL201W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL201W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/426 (0.5%). Conflicting: 1/426 (0.2%). NoInfo: 1/426 (0.2%). Certain keep: 422/426 (99.1%) ########################## YDL200C (621bp = 207AA) has 4 hits (MGT1) 6-O-methylguanine-DNA methylase Spar (test2) orthologous hit at 85% f572/617 (92.7%) over 617bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f566/604 (93.7%) over 610bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f524/581 (90.2%) over 584bp for offset 2 <== THIS IS REAL YDL200C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL200C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/427 (0.5%). Conflicting: 1/427 (0.2%). NoInfo: 1/427 (0.2%). Certain keep: 423/427 (99.1%) ########################## YDL198C (903bp = 301AA) has 5 hits (YHM1) (putative) mitochondrial carrier protein Spar (test2) orthologous hit at 91% f898/902 (99.6%) over 903bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f903/903 (100.0%) over 903bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f901/901 (100.0%) over 901bp for offset 0 <== THIS IS REAL YDL198C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL198C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/428 (0.5%). Conflicting: 1/428 (0.2%). NoInfo: 1/428 (0.2%). Certain keep: 424/428 (99.1%) ########################## YDL197C (1578bp = 526AA) has 12 hits (ASF2) Anti-silencing protein, involved in ..nscription (93) Spar (test2) orthologous hit at 81% f1121/1132 (99.0%) over 1139bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1092/1114 (98.0%) over 1122bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 66% f876/926 (94.6%) over 941bp for offset 1 <== THIS IS REAL YDL197C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL197C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/429 (0.5%). Conflicting: 1/429 (0.2%). NoInfo: 1/429 (0.2%). Certain keep: 425/429 (99.1%) ########################## YDL195W (3822bp = 1274AA) has 10 hits (SEC31) Component (p150) of COPII coat of ..y vesicles (106) Spar (test2) orthologous hit at 90% f3818/3819 (100.0%) over 3822bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3112/3124 (99.6%) over 3132bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3645/3794 (96.1%) over 3822bp for offset 0 <== THIS IS REAL YDL195W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL195W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/430 (0.5%). Conflicting: 1/430 (0.2%). NoInfo: 1/430 (0.2%). Certain keep: 426/430 (99.1%) ########################## YDL194W (2655bp = 885AA) has 33 hits (SNF3) glucose sensor Spar (test2) orthologous hit at 89% f2646/2653 (99.7%) over 2655bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2377/2428 (97.9%) over 2438bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2383/2399 (99.3%) over 2404bp for offset 0 <== THIS IS REAL YDL194W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL194W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/431 (0.5%). Conflicting: 1/431 (0.2%). NoInfo: 1/431 (0.2%). Certain keep: 427/431 (99.1%) ########################## YDL192W (546bp = 182AA) has 21 hits (ARF1) ADP-ribosylation factor Spar (test2) orthologous hit at 97% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL YDL192W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL192W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/432 (0.5%). Conflicting: 1/432 (0.2%). NoInfo: 1/432 (0.2%). Certain keep: 428/432 (99.1%) ########################## YDL190C (2886bp = 962AA) has 13 hits (UFD2) ubiquitin fusion degradation protein Spar (test2) orthologous hit at 90% f2886/2886 (100.0%) over 2886bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2873/2884 (99.6%) over 2886bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2847/2873 (99.1%) over 2878bp for offset 0 <== THIS IS REAL YDL190C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL190C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/433 (0.5%). Conflicting: 1/433 (0.2%). NoInfo: 1/433 (0.2%). Certain keep: 429/433 (99.1%) ########################## YDL188C (1134bp = 378AA) has 43 hits (PPH22) serine-threonine protein phosphatase 2A Spar (test2) orthologous hit at 91% f1134/1134 (100.0%) over 1134bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1134/1134 (100.0%) over 1134bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1129/1133 (99.6%) over 1134bp for offset 0 <== THIS IS REAL YDL188C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL188C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/434 (0.5%). Conflicting: 1/434 (0.2%). NoInfo: 1/434 (0.2%). Certain keep: 430/434 (99.1%) ########################## YDL185W (3216bp = 1072AA) has 18 hits (TFP1) vacuolar ATPase V1 domain subunit A (69 kDa) Flanking ORFs are: YDL189W and YDL187C. YDL185W skipped ########################## YDL184C (78bp = 26AA) has 43 hits (RPL41A) Ribosomal protein L41A (YL41) (L47A) Spar (test2) orthologous hit at 100% f78/78 (100.0%) over 78bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 100% f78/78 (100.0%) over 78bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 98% f78/78 (100.0%) over 78bp for offset 0 <== THIS IS REAL YDL184C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL184C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/435 (0.5%). Conflicting: 1/435 (0.2%). NoInfo: 1/435 (0.2%). Certain keep: 431/435 (99.1%) ########################## YDL182W (1287bp = 429AA) has 9 hits (LYS20) homocitrate synthase, highly homolog..to YDL131W (94) Spar (test2) orthologous hit at 91% f1287/1287 (100.0%) over 1287bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1287/1287 (100.0%) over 1287bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1220/1230 (99.2%) over 1232bp for offset 0 <== THIS IS REAL YDL182W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL182W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/436 (0.5%). Conflicting: 1/436 (0.2%). NoInfo: 1/436 (0.2%). Certain keep: 432/436 (99.1%) ########################## YDL181W (258bp = 86AA) has 8 hits (INH1) ATPase inhibitor Spar (test2) orthologous hit at 93% f258/258 (100.0%) over 258bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f258/258 (100.0%) over 258bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f258/258 (100.0%) over 258bp for offset 0 <== THIS IS REAL YDL181W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL181W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/437 (0.5%). Conflicting: 1/437 (0.2%). NoInfo: 1/437 (0.2%). Certain keep: 433/437 (99.1%) ########################## YDL179W (915bp = 305AA) has 7 hits (PCL9) Cyclin Spar (test2) orthologous hit at 87% f915/915 (100.0%) over 915bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f908/913 (99.5%) over 915bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f875/908 (96.4%) over 911bp for offset 0 <== THIS IS REAL YDL179W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL179W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/438 (0.5%). Conflicting: 1/438 (0.2%). NoInfo: 1/438 (0.2%). Certain keep: 434/438 (99.1%) ########################## YDL178W (1593bp = 531AA) has 7 hits (DLD2) D-Lactate Dehydrogenase (Cytochrome) Spar (test2) orthologous hit at 91% f1593/1593 (100.0%) over 1593bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1589/1592 (99.8%) over 1593bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1586/1591 (99.7%) over 1593bp for offset 0 <== THIS IS REAL YDL178W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL178W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/439 (0.5%). Conflicting: 1/439 (0.2%). NoInfo: 1/439 (0.2%). Certain keep: 435/439 (99.1%) ########################## YDL175C (1035bp = 345AA) has 13 hits (AIR2) Spar (test2) orthologous hit at 91% f1028/1029 (99.9%) over 1035bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1035/1035 (100.0%) over 1035bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1011/1029 (98.3%) over 1035bp for offset 0 <== THIS IS REAL YDL175C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL175C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/440 (0.5%). Conflicting: 1/440 (0.2%). NoInfo: 1/440 (0.2%). Certain keep: 436/440 (99.1%) ########################## YDL174C (1764bp = 588AA) has 9 hits (DLD1) mitochondrial enzyme D-lactate ferric..oreductase (106) Spar (test2) orthologous hit at 90% f1764/1764 (100.0%) over 1764bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1674/1741 (96.2%) over 1747bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1289/1664 (77.5%) over 1668bp for offset 0 Sbay (test3) Longest island has f99 at 81% over 1304bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|_____|____|____|____|____|____|____|____|___| 99f 76% 368bp 99f 81% 1304bp Sb842full ||=================|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YDL174C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL174C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/441 (0.5%). Conflicting: 1/441 (0.2%). NoInfo: 1/441 (0.2%). Certain keep: 437/441 (99.1%) ########################## YDL171C (6438bp = 2146AA) has 16 hits (GLT1) Glutamate synthase (NADH) Spar (test2) orthologous hit at 92% f6435/6437 (100.0%) over 6438bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f6430/6435 (99.9%) over 6437bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f3562/3628 (98.2%) over 3630bp for offset 0 <== THIS IS REAL YDL171C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL171C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/442 (0.5%). Conflicting: 1/442 (0.2%). NoInfo: 1/442 (0.2%). Certain keep: 438/442 (99.1%) ########################## YDL170W (1587bp = 529AA) has 9 hits (UGA3) zinc-finger transcription factor of t..omain type (125) Spar (test2) orthologous hit at 91% f1586/1587 (99.9%) over 1587bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1587/1587 (100.0%) over 1587bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1555/1582 (98.3%) over 1585bp for offset 0 <== THIS IS REAL YDL170W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL170W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/443 (0.5%). Conflicting: 1/443 (0.2%). NoInfo: 1/443 (0.2%). Certain keep: 439/443 (99.1%) ########################## YDL169C (672bp = 224AA) has 12 hits (UGX2) Product of gene unknown Spar (test2) orthologous hit at 86% f669/672 (99.6%) over 672bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f654/670 (97.6%) over 672bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f380/481 (79.0%) over 496bp for offset 2 Sbay (test3) Longest island has f95 at 77% over 330bp <== THIS IS REAL 0 100 200 300 400 500 600 672 |____________|____________|_____________|____________|____________|_____________|_________| 95f 77% 330bp Sb843full |===========================================>.....................> | YDL169C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL169C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/444 (0.5%). Conflicting: 1/444 (0.2%). NoInfo: 1/444 (0.2%). Certain keep: 440/444 (99.1%) ########################## YDL168W (1161bp = 387AA) has 4 hits (SFA1) Long-chain alcohol dehydrogenase (glu..drogenase) (126) Spar (test2) orthologous hit at 89% f1160/1160 (100.0%) over 1160bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1160/1160 (100.0%) over 1160bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1155/1161 (99.5%) over 1161bp for offset 0 <== THIS IS REAL YDL168W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL168W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/445 (0.4%). Conflicting: 1/445 (0.2%). NoInfo: 1/445 (0.2%). Certain keep: 441/445 (99.1%) ########################## YDL167C (2160bp = 720AA) has 744 hits (NRP1) Asparagine-rich protein Spar (test2) orthologous hit at 88% f1665/1665 (100.0%) over 1665bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1660/1686 (98.5%) over 1697bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1612/1637 (98.5%) over 1645bp for offset 0 <== THIS IS REAL YDL167C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL167C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/446 (0.4%). Conflicting: 1/446 (0.2%). NoInfo: 1/446 (0.2%). Certain keep: 442/446 (99.1%) ########################## YDL166C (594bp = 198AA) has 5 hits (FAP7) Nuclear protein involved in oxidative ..s response (95) Spar (test2) orthologous hit at 90% f593/593 (100.0%) over 593bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f594/594 (100.0%) over 594bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f589/592 (99.5%) over 593bp for offset 0 <== THIS IS REAL YDL166C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL166C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/447 (0.4%). Conflicting: 1/447 (0.2%). NoInfo: 1/447 (0.2%). Certain keep: 443/447 (99.1%) ########################## YDL165W (576bp = 192AA) has 4 hits (CDC36) nuclear protein that negatively regul..nscription (104) Spar (test2) orthologous hit at 90% f576/576 (100.0%) over 576bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f576/576 (100.0%) over 576bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f576/576 (100.0%) over 576bp for offset 0 <== THIS IS REAL YDL165W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL165W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/448 (0.4%). Conflicting: 1/448 (0.2%). NoInfo: 1/448 (0.2%). Certain keep: 444/448 (99.1%) ########################## YDL164C (2268bp = 756AA) has 8 hits (CDC9) DNA ligase Flanking ORFs are: YDL166C and YDL164C. YDL164C skipped ########################## YDL161W (1365bp = 455AA) has 592 hits (ENT1) Ent1p Flanking ORFs are: YDL166C and YDL164C. YDL161W skipped ########################## YDL160C (1521bp = 507AA) has 81 hits (DHH1) (putative) DEAD box RNA helicase Spar (test2) orthologous hit at 92% f1521/1521 (100.0%) over 1521bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1521/1521 (100.0%) over 1521bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1518/1520 (99.9%) over 1521bp for offset 0 <== THIS IS REAL YDL160C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL160C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/449 (0.4%). Conflicting: 1/449 (0.2%). NoInfo: 1/449 (0.2%). Certain keep: 445/449 (99.1%) ########################## YDL159W (1548bp = 516AA) has 52 hits (STE7) MEK homolog Flanking ORFs are: YDL161W and YDL159W-A. YDL159W skipped ########################## YDL155W (1284bp = 428AA) has 56 hits (CLB3) G(sub)2-specific B-type cyclin Spar (test2) orthologous hit at 89% f1275/1283 (99.4%) over 1284bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1283/1284 (99.9%) over 1284bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1272/1282 (99.2%) over 1284bp for offset 0 <== THIS IS REAL YDL155W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL155W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/450 (0.4%). Conflicting: 1/450 (0.2%). NoInfo: 1/450 (0.2%). Certain keep: 446/450 (99.1%) ########################## YDL154W (2706bp = 902AA) has 25 hits (MSH5) MutS homolog involved in chromosome exchange Spar (test2) orthologous hit at 86% f2697/2703 (99.8%) over 2706bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2111/2175 (97.1%) over 2187bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f2118/2274 (93.1%) over 2296bp for offset 0 <== THIS IS REAL YDL154W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL154W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/451 (0.4%). Conflicting: 1/451 (0.2%). NoInfo: 1/451 (0.2%). Certain keep: 447/451 (99.1%) ########################## YDL153C (1833bp = 611AA) has 873 hits (SAS10) nuclear protein involved in silencing Flanking ORFs are: YDL155W and YDL153C. YDL153C skipped ########################## YDL151C (582bp = 194AA) has 18 hits (FYV3) Hypothetical ORF Flanking ORFs are: YDL155W and YDL153C. YDL151C skipped ########################## YDL150W (1269bp = 423AA) has 35 hits (RPC53) RNA polymerase III (C) subunit, hom..51 protein (108) Flanking ORFs are: YDL155W and YDL153C. YDL150W skipped ########################## YDL149W (2994bp = 998AA) has 36 hits (APG9) Integral membrane protein Spar (test2) orthologous hit at 86% f2845/2918 (97.5%) over 2927bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1047/1100 (95.2%) over 1111bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2928/2980 (98.3%) over 2994bp for offset 0 <== THIS IS REAL YDL149W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL149W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/452 (0.4%). Conflicting: 1/452 (0.2%). NoInfo: 1/452 (0.2%). Certain keep: 448/452 (99.1%) ########################## YDL148C (2433bp = 811AA) has 111 hits (NOP14) NucleOlar Protein 14 Spar (test2) orthologous hit at 90% f2433/2433 (100.0%) over 2433bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2420/2430 (99.6%) over 2432bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2381/2425 (98.2%) over 2433bp for offset 0 <== THIS IS REAL YDL148C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL148C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/453 (0.4%). Conflicting: 1/453 (0.2%). NoInfo: 1/453 (0.2%). Certain keep: 449/453 (99.1%) ########################## YDL147W (1338bp = 446AA) has 15 hits (RPN5) Subunit of the regulatory particle o..proteasome (96) Spar (test2) orthologous hit at 91% f1338/1338 (100.0%) over 1338bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1338/1338 (100.0%) over 1338bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1338/1338 (100.0%) over 1338bp for offset 0 <== THIS IS REAL YDL147W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL147W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/454 (0.4%). Conflicting: 1/454 (0.2%). NoInfo: 1/454 (0.2%). Certain keep: 450/454 (99.1%) ########################## YDL145C (3606bp = 1202AA) has 24 hits (COP1) alpha subunit of the coatamer compl..-alpha-COP (99) Spar (test2) orthologous hit at 92% f3606/3606 (100.0%) over 3606bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f3590/3603 (99.6%) over 3606bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f3606/3606 (100.0%) over 3606bp for offset 0 <== THIS IS REAL YDL145C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL145C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/455 (0.4%). Conflicting: 1/455 (0.2%). NoInfo: 1/455 (0.2%). Certain keep: 451/455 (99.1%) ########################## YDL143W (1587bp = 529AA) has 26 hits (CCT4) component of chaperonin complex Spar (test2) orthologous hit at 92% f1587/1587 (100.0%) over 1587bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1587/1587 (100.0%) over 1587bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1582/1586 (99.7%) over 1587bp for offset 0 <== THIS IS REAL YDL143W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL143W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/456 (0.4%). Conflicting: 1/456 (0.2%). NoInfo: 1/456 (0.2%). Certain keep: 452/456 (99.1%) ########################## YDL142C (852bp = 284AA) has 5 hits (CRD1) Cardiolipin synthase Spar (test2) orthologous hit at 86% f492/517 (95.2%) over 518bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f847/851 (99.5%) over 852bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f808/844 (95.7%) over 852bp for offset 0 <== THIS IS REAL YDL142C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL142C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/457 (0.4%). Conflicting: 1/457 (0.2%). NoInfo: 1/457 (0.2%). Certain keep: 453/457 (99.1%) ########################## YDL141W (2073bp = 691AA) has 6 hits (BPL1) Biotin:apoprotein ligase Spar (test2) non-orthologous hit at 90% f1705/1708 (99.8%) over 1709bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2056/2069 (99.4%) over 2073bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2000/2002 (99.9%) over 2003bp for offset 0 <== THIS IS REAL YDL141W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL141W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/458 (0.4%). Conflicting: 1/458 (0.2%). NoInfo: 1/458 (0.2%). Certain keep: 454/458 (99.1%) ########################## YDL140C (5202bp = 1734AA) has 71 hits (RPO21) RNA polymerase II large subunit Spar (test2) orthologous hit at 93% f2411/2423 (99.5%) over 2424bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1266/1272 (99.5%) over 1273bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f2408/2572 (93.6%) over 2572bp for offset 0 <== THIS IS REAL YDL140C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL140C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/459 (0.4%). Conflicting: 1/459 (0.2%). NoInfo: 1/459 (0.2%). Certain keep: 455/459 (99.1%) ########################## YDL139C (744bp = 248AA) has 21 hits (SCM3) Suppressor of chromosome missegregation Spar (test2) orthologous hit at 86% f669/742 (90.2%) over 743bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f691/741 (93.3%) over 742bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 75% f620/669 (92.7%) over 680bp for offset 1 <== THIS IS REAL YDL139C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL139C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/460 (0.4%). Conflicting: 1/460 (0.2%). NoInfo: 1/460 (0.2%). Certain keep: 456/460 (99.1%) ########################## YDL138W (2292bp = 764AA) has 34 hits (RGT2) glucose permease Spar (test2) orthologous hit at 88% f2274/2287 (99.4%) over 2292bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2238/2283 (98.0%) over 2292bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1630/1681 (97.0%) over 1688bp for offset 0 <== THIS IS REAL YDL138W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL138W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/461 (0.4%). Conflicting: 1/461 (0.2%). NoInfo: 1/461 (0.2%). Certain keep: 457/461 (99.1%) ########################## YDL137W (546bp = 182AA) has 20 hits (ARF2) ADP-ribosylation factor 2 Spar (test2) orthologous hit at 94% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 88% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL YDL137W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL137W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/462 (0.4%). Conflicting: 1/462 (0.2%). NoInfo: 1/462 (0.2%). Certain keep: 458/462 (99.1%) ########################## YDL135C (609bp = 203AA) has 16 hits (RDI1) Rho GDP dissociation inhibitor Spar (test2) orthologous hit at 93% f609/609 (100.0%) over 609bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f604/606 (99.7%) over 609bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 86% f609/609 (100.0%) over 609bp for offset 0 <== THIS IS REAL YDL135C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL135C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/463 (0.4%). Conflicting: 1/463 (0.2%). NoInfo: 1/463 (0.2%). Certain keep: 459/463 (99.1%) ########################## YDL134C (1110bp = 370AA) has 41 hits (PPH21) serine-threonine protein phosphatase 2A Spar (test2) orthologous hit at 91% f1110/1110 (100.0%) over 1110bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1106/1109 (99.7%) over 1110bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f555/1109 (50.0%) over 1110bp for offset 0 Sbay (test3) Longest island has f99 at 83% over 560bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 11k |_______|_______|_______|_______|_______|_______|_______|_______|_______|________|_______|| 99f 83% 560bp 100f 88% 551bp Sb846full |============================================|oooooooooooooooooooooooooooooooooooooooooooo| YDL134C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL134C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/464 (0.4%). Conflicting: 1/464 (0.2%). NoInfo: 1/464 (0.2%). Certain keep: 460/464 (99.1%) ########################## YDL133C-A (78bp = 26AA) has 42 hits (RPL41B) Ribosomal protein L41B (YL41) (L47B) Spar (test2) orthologous hit at 98% f78/78 (100.0%) over 78bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 100% f78/78 (100.0%) over 78bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 100% f78/78 (100.0%) over 78bp for offset 0 <== THIS IS REAL YDL133C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL133C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/465 (0.4%). Conflicting: 1/465 (0.2%). NoInfo: 1/465 (0.2%). Certain keep: 461/465 (99.1%) ########################## YDL132W (2448bp = 816AA) has 9 hits (CDC53) involved in G1 cyclin degradation Spar (test2) orthologous hit at 91% f2448/2448 (100.0%) over 2448bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2445/2447 (99.9%) over 2448bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2448/2448 (100.0%) over 2448bp for offset 0 <== THIS IS REAL YDL132W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL132W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/466 (0.4%). Conflicting: 1/466 (0.2%). NoInfo: 1/466 (0.2%). Certain keep: 462/466 (99.1%) ########################## YDL131W (1323bp = 441AA) has 8 hits (LYS21) homocitrate synthase, highly homolog..to YDL182W (94) Spar (test2) orthologous hit at 91% f1322/1322 (100.0%) over 1322bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1321/1321 (100.0%) over 1321bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f836/1314 (63.6%) over 1322bp for offset 1 Sbay (test3) Longest island has f100 at 87% over 830bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k1k |_____|______|______|______|______|_____|______|______|______|______|_____|______|______|_| 98f 85% 392bp 100f 87% 830bp Sb846full |=========================|oooooooooooooooooooooooooooooooooooooooooooooooooooooooo>.....>| YDL131W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL131W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/467 (0.4%). Conflicting: 1/467 (0.2%). NoInfo: 1/467 (0.2%). Certain keep: 463/467 (99.1%) ########################## YDL130W-A (261bp = 87AA) has 35 hits (STF1) ATPase stabilizing factor Spar (test2) orthologous hit at 91% f261/261 (100.0%) over 261bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f261/261 (100.0%) over 261bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f261/261 (100.0%) over 261bp for offset 0 <== THIS IS REAL YDL130W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL130W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/468 (0.4%). Conflicting: 1/468 (0.2%). NoInfo: 1/468 (0.2%). Certain keep: 464/468 (99.1%) ########################## YDL128W (1236bp = 412AA) has 7 hits (VCX1) vacuolar H+/Ca2+ exchanger Spar (test2) orthologous hit at 91% f1236/1236 (100.0%) over 1236bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1236/1236 (100.0%) over 1236bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f1019/1024 (99.5%) over 1025bp for offset 1 <== THIS IS REAL YDL128W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL128W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/469 (0.4%). Conflicting: 1/469 (0.2%). NoInfo: 1/469 (0.2%). Certain keep: 465/469 (99.1%) ########################## YDL127W (840bp = 280AA) has 12 hits (PCL2) G1 cyclin Spar (test2) orthologous hit at 88% f788/840 (93.8%) over 840bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f779/838 (93.0%) over 840bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f495/552 (89.7%) over 553bp for offset 1 Sbay (test3) Longest island has f97 at 75% over 510bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 840 |_________|__________|__________|_________|__________|__________|__________|_________|____| 97f 75% 510bp Sb961brk |=====================================================>....>| YDL127W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL127W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/470 (0.4%). Conflicting: 1/470 (0.2%). NoInfo: 1/470 (0.2%). Certain keep: 466/470 (99.1%) ########################## YDL126C (2508bp = 836AA) has 142 hits (CDC48) microsomal ATPase Spar (test2) orthologous hit at 92% f2508/2508 (100.0%) over 2508bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2341/2392 (97.9%) over 2392bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f2506/2508 (99.9%) over 2508bp for offset 0 <== THIS IS REAL YDL126C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL126C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/471 (0.4%). Conflicting: 1/471 (0.2%). NoInfo: 1/471 (0.2%). Certain keep: 467/471 (99.2%) ########################## YDL123W (423bp = 141AA) has 3 hits (SNA4) Small integral membrane protein Spar (test2) orthologous hit at 89% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f395/416 (95.0%) over 423bp for offset 0 <== THIS IS REAL YDL123W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL123W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/472 (0.4%). Conflicting: 1/472 (0.2%). NoInfo: 1/472 (0.2%). Certain keep: 468/472 (99.2%) ########################## YDL122W (2430bp = 810AA) has 89 hits (UBP1) Ubiquitin-specific protease Spar (test2) orthologous hit at 85% f1993/2078 (95.9%) over 2088bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1267/1382 (91.7%) over 1393bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2081/2352 (88.5%) over 2378bp for offset 1 Sbay (test3) Longest island has f99 at 81% over 1923bp <== THIS IS REAL 0 100 200 300400 500 600700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k2k |__|___|___|__|___|___|__|___|___|___|__|___|___|__|___|___|__|___|___|___|__|___|___|__|_| 99f 81% 1923bp Sb961full |======================================================================>................> | YDL122W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL122W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/473 (0.4%). Conflicting: 1/473 (0.2%). NoInfo: 1/473 (0.2%). Certain keep: 469/473 (99.2%) ########################## YDL120W (525bp = 175AA) has 6 hits (YFH1) mitochondrial protein that regulates m..cumulation (110) Spar (test2) orthologous hit at 90% f522/522 (100.0%) over 525bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f520/521 (99.8%) over 524bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f509/520 (97.9%) over 525bp for offset 0 <== THIS IS REAL YDL120W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL120W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/474 (0.4%). Conflicting: 1/474 (0.2%). NoInfo: 1/474 (0.2%). Certain keep: 470/474 (99.2%) ########################## YDL117W (2658bp = 886AA) has 13 hits (CYK3) may be involved in cytokinesis Spar (test2) orthologous hit at 89% f2432/2436 (99.8%) over 2436bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2640/2655 (99.4%) over 2658bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2618/2652 (98.7%) over 2658bp for offset 0 <== THIS IS REAL YDL117W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL117W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/475 (0.4%). Conflicting: 1/475 (0.2%). NoInfo: 1/475 (0.2%). Certain keep: 471/475 (99.2%) ########################## YDL116W (2181bp = 727AA) has 23 hits (NUP84) Protein with homology to mammalian Nup107p Spar (test2) orthologous hit at 88% f2178/2180 (99.9%) over 2181bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2151/2177 (98.8%) over 2181bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2151/2176 (98.9%) over 2181bp for offset 0 <== THIS IS REAL YDL116W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL116W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/476 (0.4%). Conflicting: 1/476 (0.2%). NoInfo: 1/476 (0.2%). Certain keep: 472/476 (99.2%) ########################## YDL115C (723bp = 241AA) has 33 hits (IWR1) Hypothetical ORF Spar (test2) orthologous hit at 90% f723/723 (100.0%) over 723bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f723/723 (100.0%) over 723bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f723/723 (100.0%) over 723bp for offset 0 <== THIS IS REAL YDL115C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL115C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/477 (0.4%). Conflicting: 1/477 (0.2%). NoInfo: 1/477 (0.2%). Certain keep: 473/477 (99.2%) ########################## YDL112W (4311bp = 1437AA) has 16 hits (TRM3) tRNA (Gm18) ribose methylase Spar (test2) orthologous hit at 87% f4308/4310 (100.0%) over 4311bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f4253/4301 (98.9%) over 4311bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f4244/4297 (98.8%) over 4311bp for offset 0 <== THIS IS REAL YDL112W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL112W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/478 (0.4%). Conflicting: 1/478 (0.2%). NoInfo: 1/478 (0.2%). Certain keep: 474/478 (99.2%) ########################## YDL111C (798bp = 266AA) has 4 hits (RRP42) Component of the exosome 3->5 exoribo.. (Rrp44p). (143) Spar (test2) orthologous hit at 90% f794/797 (99.6%) over 798bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f798/798 (100.0%) over 798bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f798/798 (100.0%) over 798bp for offset 0 <== THIS IS REAL YDL111C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL111C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/479 (0.4%). Conflicting: 1/479 (0.2%). NoInfo: 1/479 (0.2%). Certain keep: 475/479 (99.2%) ########################## YDL107W (1056bp = 352AA) has 11 hits (MSS2) cox1 pre-mRNA splicing factor Spar (test2) orthologous hit at 86% f1044/1054 (99.1%) over 1056bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1049/1055 (99.4%) over 1056bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1033/1052 (98.2%) over 1056bp for offset 0 <== THIS IS REAL YDL107W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL107W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/480 (0.4%). Conflicting: 1/480 (0.2%). NoInfo: 1/480 (0.2%). Certain keep: 476/480 (99.2%) ########################## YDL106C (1680bp = 560AA) has 588 hits (PHO2) Homeobox-domain containing transcri..her genes. (148) Spar (test2) orthologous hit at 88% f1639/1667 (98.3%) over 1672bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1661/1673 (99.3%) over 1680bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f544/551 (98.7%) over 552bp for offset 0 <== THIS IS REAL YDL106C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL106C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/481 (0.4%). Conflicting: 1/481 (0.2%). NoInfo: 1/481 (0.2%). Certain keep: 477/481 (99.2%) ########################## YDL105W (1209bp = 403AA) has 12 hits (QRI2) Product of gene unknown Spar (test2) orthologous hit at 89% f1208/1209 (99.9%) over 1209bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f350/657 (53.3%) over 657bp for offset 0 Smik (test3) Longest island has f100 at 82% over 350bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 55% f257/546 (47.1%) over 586bp for offset 0 Sbay (test3) Longest island has f73 at 55% over 106bp Sbay (test2) non-orthologous hit at 64% f57/138 (41.3%) over 146bp for offset 1 Sbay (test3) Longest island has f81 at 59% over 59bp 0 100 200 300 400 500 600 700 800 900 1k 1k 11k |______|______|_______|______|_______|______|_______|______|______|_______|______|_______|| 100f 82% 350bp 100f 87% 307bp Sm184brk |=========================|oooooooooooooooooooooo| 91f 70%86f 49%66f 59% 44bp 73f 55% 106bp Sb876full |....|=>....|x>....|===>..........|=======>.> | 81f 68f83100f 75% 12bp Sb627full ||ooo|==|x|> | YDL105W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDL105W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/482 (0.4%). Conflicting: 1/482 (0.2%). NoInfo: 1/482 (0.2%). Certain keep: 478/482 (99.2%) ########################## YDL104C (1224bp = 408AA) has 6 hits (QRI7) similar to H.influenzae sialoglycoprotease Spar (test2) orthologous hit at 88% f1217/1223 (99.5%) over 1224bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f845/871 (97.0%) over 873bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f514/522 (98.5%) over 523bp for offset 0 <== THIS IS REAL YDL104C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL104C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/483 (0.4%). Conflicting: 1/483 (0.2%). NoInfo: 1/483 (0.2%). Certain keep: 479/483 (99.2%) ########################## YDL103C (1434bp = 478AA) has 6 hits (QRI1) UDP-N-acetylglucosamine pyrophosphorylase Spar (test2) orthologous hit at 89% f1427/1433 (99.6%) over 1434bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1423/1432 (99.4%) over 1434bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1411/1429 (98.7%) over 1434bp for offset 0 <== THIS IS REAL YDL103C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL103C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/484 (0.4%). Conflicting: 1/484 (0.2%). NoInfo: 1/484 (0.2%). Certain keep: 480/484 (99.2%) ########################## YDL102W (3294bp = 1098AA) has 12 hits (CDC2) largest and catalytic subunit of DN..II (delta) (104) Spar (test2) orthologous hit at 91% f3294/3294 (100.0%) over 3294bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3283/3292 (99.7%) over 3294bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2880/2880 (100.0%) over 2880bp for offset 0 <== THIS IS REAL YDL102W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL102W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/485 (0.4%). Conflicting: 1/485 (0.2%). NoInfo: 1/485 (0.2%). Certain keep: 481/485 (99.2%) ########################## YDL101C (1542bp = 514AA) has 56 hits (DUN1) protein kinase Spar (test2) orthologous hit at 91% f1542/1542 (100.0%) over 1542bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1528/1540 (99.2%) over 1542bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f1520/1538 (98.8%) over 1542bp for offset 0 <== THIS IS REAL YDL101C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL101C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/486 (0.4%). Conflicting: 1/486 (0.2%). NoInfo: 1/486 (0.2%). Certain keep: 482/486 (99.2%) ########################## YDL100C (1065bp = 355AA) has 8 hits (ARR4) resistance to arsenicals Spar (test2) orthologous hit at 93% f1065/1065 (100.0%) over 1065bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1065/1065 (100.0%) over 1065bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f927/959 (96.7%) over 959bp for offset 0 <== THIS IS REAL YDL100C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL100C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/487 (0.4%). Conflicting: 1/487 (0.2%). NoInfo: 1/487 (0.2%). Certain keep: 483/487 (99.2%) ########################## YDL098C (585bp = 195AA) has 11 hits (SNU23) Putative RNA binding zinc finger protein Spar (test2) orthologous hit at 85% f585/585 (100.0%) over 585bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f567/582 (97.4%) over 585bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f568/576 (98.6%) over 577bp for offset 0 <== THIS IS REAL YDL098C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL098C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/488 (0.4%). Conflicting: 1/488 (0.2%). NoInfo: 1/488 (0.2%). Certain keep: 484/488 (99.2%) ########################## YDL097C (1305bp = 435AA) has 6 hits (RPN6) Subunit of the regulatory particle of..proteasome (95) Spar (test2) orthologous hit at 91% f1159/1159 (100.0%) over 1159bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f790/1295 (61.0%) over 1299bp for offset 0 Smik (test3) Longest island has f100 at 87% over 785bp <== THIS IS REAL Sbay (test2) orthologous hit at 84% f766/791 (96.8%) over 791bp for offset 2 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 11k |_____|______|______|______|______|______|______|______|______|_____|______|______|______|| 97f 85% 515bp 100f 87% 785bp Sm183brk |==================================>|ooooooooooooooooooooooooooooooooooooooooooooooooooooo| YDL097C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL097C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/489 (0.4%). Conflicting: 1/489 (0.2%). NoInfo: 1/489 (0.2%). Certain keep: 485/489 (99.2%) ########################## YDL095W (2454bp = 818AA) has 31 hits (PMT1) dolichyl phosphate-D-mannose:protein..ransferase (104) Flanking ORFs are: YDL098C and YDL096C. YDL095W skipped ########################## YDL093W (2232bp = 744AA) has 26 hits (PMT5) dolichyl phosphate-D-mannose:protein..ransferase (104) Flanking ORFs are: YDL098C and YDL096C. YDL093W skipped ########################## YDL092W (441bp = 147AA) has 45 hits (SRP14) Signal recognition particle subunit Spar (test2) orthologous hit at 88% f383/441 (86.8%) over 441bp for offset 1 Spar (test3) Longest island has f100 at 89% over 383bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f437/438 (99.8%) over 441bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f441/441 (100.0%) over 441bp for offset 0 <== THIS IS REAL 0 100 200 300 400 441 |___________________|___________________|____________________|___________________|________| 100f 89% 383bp Sp100full |...........|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YDL092W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL092W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/490 (0.4%). Conflicting: 1/490 (0.2%). NoInfo: 1/490 (0.2%). Certain keep: 486/490 (99.2%) ########################## YDL090C (1296bp = 432AA) has 8 hits (RAM1) beta subunit of farnesyltransferase Spar (test2) orthologous hit at 88% f1291/1294 (99.8%) over 1295bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1263/1286 (98.2%) over 1287bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1272/1285 (99.0%) over 1286bp for offset 0 <== THIS IS REAL YDL090C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL090C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/491 (0.4%). Conflicting: 1/491 (0.2%). NoInfo: 1/491 (0.2%). Certain keep: 487/491 (99.2%) ########################## YDL088C (1587bp = 529AA) has 188 hits (ASM4) Nuclear pore complex protein Spar (test2) orthologous hit at 86% f1579/1580 (99.9%) over 1586bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1464/1530 (95.7%) over 1536bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 64% f1236/1555 (79.5%) over 1587bp for offset 0 Sbay (test3) Longest island has f95 at 74% over 866bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k |____|_____|_____|____|_____|_____|____|_____|_____|____|_____|_____|____|_____|_____|____| 95f 74% 866bp Sb799full |..........................................|==============================================|=> YDL088C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL088C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/492 (0.4%). Conflicting: 1/492 (0.2%). NoInfo: 1/492 (0.2%). Certain keep: 488/492 (99.2%) ########################## YDL087C (786bp = 262AA) has 5 hits (LUC7) (putative) involved in mRNA processing Spar (test2) orthologous hit at 91% f782/785 (99.6%) over 786bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f773/775 (99.7%) over 778bp for offset 0 <== THIS IS REAL YDL087C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL087C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/493 (0.4%). Conflicting: 1/493 (0.2%). NoInfo: 1/493 (0.2%). Certain keep: 489/493 (99.2%) ########################## YDL085W (1638bp = 546AA) has 13 hits (NDE2) Hypothetical ORF Spar (test2) orthologous hit at 90% f1638/1638 (100.0%) over 1638bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1620/1635 (99.1%) over 1638bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1628/1637 (99.5%) over 1638bp for offset 0 <== THIS IS REAL YDL085W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL085W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/494 (0.4%). Conflicting: 1/494 (0.2%). NoInfo: 1/494 (0.2%). Certain keep: 490/494 (99.2%) ########################## YDL084W (1341bp = 447AA) has 55 hits (SUB2) RNA helicase Spar (test2) orthologous hit at 94% f1341/1341 (100.0%) over 1341bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1040/1152 (90.3%) over 1154bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f1341/1341 (100.0%) over 1341bp for offset 0 <== THIS IS REAL YDL084W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL084W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/495 (0.4%). Conflicting: 1/495 (0.2%). NoInfo: 1/495 (0.2%). Certain keep: 491/495 (99.2%) ########################## YDL081C (321bp = 107AA) has 92 hits (RPP1A) Acidic ribosomal protein P1A (YP1alpha) (A1) Spar (test2) orthologous hit at 96% f321/321 (100.0%) over 321bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 93% f321/321 (100.0%) over 321bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 91% f320/320 (100.0%) over 320bp for offset 0 <== THIS IS REAL YDL081C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL081C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/496 (0.4%). Conflicting: 1/496 (0.2%). NoInfo: 1/496 (0.2%). Certain keep: 492/496 (99.2%) ########################## YDL080C (1830bp = 610AA) has 17 hits (THI3) alpha-ketoisocaproate decarboxylase Spar (test2) non-orthologous hit at 91% f1805/1829 (98.7%) over 1830bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1802/1828 (98.6%) over 1830bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1402/1827 (76.7%) over 1830bp for offset 0 Sbay (test3) Longest island has f99 at 85% over 1382bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k1k |___|____|____|____|____|____|____|____|____|____|____|____|___|____|____|____|____|____|_| 99f 85% 1382bp 100f 82% 215Sb799full |===================================================================>.........|ooooooooo>.| YDL080C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL080C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/497 (0.4%). Conflicting: 1/497 (0.2%). NoInfo: 1/497 (0.2%). Certain keep: 493/497 (99.2%) ########################## YDL078C (1032bp = 344AA) has 9 hits (MDH3) malate dehydrogenase Spar (test2) orthologous hit at 91% f1032/1032 (100.0%) over 1032bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1025/1031 (99.4%) over 1032bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1032/1032 (100.0%) over 1032bp for offset 0 <== THIS IS REAL YDL078C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL078C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/498 (0.4%). Conflicting: 1/498 (0.2%). NoInfo: 1/498 (0.2%). Certain keep: 494/498 (99.2%) ########################## YDL077C (3150bp = 1050AA) has 20 hits (VAM6) involved in vacuolar morphogenesis Spar (test2) orthologous hit at 90% f3150/3150 (100.0%) over 3150bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1447/1457 (99.3%) over 1459bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3107/3143 (98.9%) over 3150bp for offset 0 <== THIS IS REAL YDL077C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL077C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/499 (0.4%). Conflicting: 1/499 (0.2%). NoInfo: 1/499 (0.2%). Certain keep: 495/499 (99.2%) ########################## YDL074C (2103bp = 701AA) has 60 hits (BRE1) putative coiled-coil protein with RI..ke domains (113) Spar (test2) orthologous hit at 87% f1138/1138 (100.0%) over 1138bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1825/1843 (99.0%) over 1853bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2081/2099 (99.1%) over 2103bp for offset 0 <== THIS IS REAL YDL074C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL074C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/500 (0.4%). Conflicting: 1/500 (0.2%). NoInfo: 1/500 (0.2%). Certain keep: 496/500 (99.2%) ########################## YDL070W (1917bp = 639AA) has 119 hits (BDF2) Bromodomain protein, homolog of Bdf1 Flanking ORFs are: YDL075W and YDL073W. YDL070W skipped ########################## YDL069C (702bp = 234AA) has 20 hits (CBS1) translational activator of cytochrome b Flanking ORFs are: YDL075W and YDL073W. YDL069C skipped ########################## YDL067C (180bp = 60AA) has 18 hits (COX9) Subunit VIIa of cytochrome c oxidase Spar (test2) orthologous hit at 96% f180/180 (100.0%) over 180bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f180/180 (100.0%) over 180bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f105/180 (58.3%) over 180bp for offset 0 Sbay (test3) Longest island has f100 at 90% over 105bp 0 100 180 |_________________________________________________|_______________________________________| 100f 90% 105bp 100f 88% 75bp Sb798full ||===================================================>|ooooooooooooooooooooooooooooooooooo|> YDL067C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDL067C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/501 (0.4%). Conflicting: 1/501 (0.2%). NoInfo: 1/501 (0.2%). Certain keep: 497/501 (99.2%) ########################## YDL066W (1287bp = 429AA) has 13 hits (IDP1) Mitochondrial form of NADP-specific ..ydrogenase (104) Spar (test2) orthologous hit at 93% f1284/1287 (99.8%) over 1287bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1286/1286 (100.0%) over 1286bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f125/125 (100.0%) over 125bp for offset 0 Sbay (test3) Longest island has f100 at 87% over 125bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |_____|______|______|______|______|______|______|______|______|______|______|______|______| 100f 87% Sb797brk |========| YDL066W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDL066W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/502 (0.4%). Conflicting: 1/502 (0.2%). NoInfo: 1/502 (0.2%). Certain keep: 498/502 (99.2%) ########################## YDL065C (1053bp = 351AA) has 33 hits (PEX19) 40 kDa farnesylated protein associa..eroxisomes (100) Spar (test2) orthologous hit at 87% f1034/1047 (98.8%) over 1053bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1028/1049 (98.0%) over 1051bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1024/1049 (97.6%) over 1053bp for offset 1 <== THIS IS REAL YDL065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/503 (0.4%). Conflicting: 1/503 (0.2%). NoInfo: 1/503 (0.2%). Certain keep: 499/503 (99.2%) ########################## YDL061C (171bp = 57AA) has 23 hits (RPS29B) Ribosomal protein S29B (S36B) (YS29) Spar (test2) orthologous hit at 98% f171/171 (100.0%) over 171bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 98% f171/171 (100.0%) over 171bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f171/171 (100.0%) over 171bp for offset 0 <== THIS IS REAL YDL061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/504 (0.4%). Conflicting: 1/504 (0.2%). NoInfo: 1/504 (0.2%). Certain keep: 500/504 (99.2%) ########################## YDL060W (2367bp = 789AA) has 69 hits (TSR1) Spar (test2) orthologous hit at 89% f2367/2367 (100.0%) over 2367bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1404/1406 (99.9%) over 1407bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1393/1426 (97.7%) over 1427bp for offset 0 <== THIS IS REAL YDL060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/505 (0.4%). Conflicting: 1/505 (0.2%). NoInfo: 1/505 (0.2%). Certain keep: 501/505 (99.2%) ########################## YDL059C (717bp = 239AA) has 6 hits (RAD59) The RAD59 gene product has homology t..2 protein. (100) Spar (test2) orthologous hit at 90% f717/717 (100.0%) over 717bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f689/710 (97.0%) over 716bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f691/714 (96.8%) over 717bp for offset 0 <== THIS IS REAL YDL059C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL059C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/506 (0.4%). Conflicting: 1/506 (0.2%). NoInfo: 1/506 (0.2%). Certain keep: 502/506 (99.2%) ########################## YDL058W (5373bp = 1791AA) has 478 hits (USO1) Integrin analogue gene Spar (test2) orthologous hit at 86% f5321/5364 (99.2%) over 5373bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f4535/4646 (97.6%) over 4667bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f5110/5327 (95.9%) over 5368bp for offset 1 <== THIS IS REAL YDL058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/507 (0.4%). Conflicting: 1/507 (0.2%). NoInfo: 1/507 (0.2%). Certain keep: 503/507 (99.2%) ########################## YDL056W (2502bp = 834AA) has 44 hits (MBP1) transcription factor Spar (test2) orthologous hit at 88% f1782/1798 (99.1%) over 1800bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1778/1793 (99.2%) over 1797bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1770/1785 (99.2%) over 1787bp for offset 0 <== THIS IS REAL YDL056W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL056W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/508 (0.4%). Conflicting: 1/508 (0.2%). NoInfo: 1/508 (0.2%). Certain keep: 504/508 (99.2%) ########################## YDL055C (1086bp = 362AA) has 5 hits (PSA1) mannose-1-phosphate guanyltransferase..sphorylase (111) Spar (test2) orthologous hit at 95% f1086/1086 (100.0%) over 1086bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f1086/1086 (100.0%) over 1086bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 88% f1086/1086 (100.0%) over 1086bp for offset 0 <== THIS IS REAL YDL055C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL055C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/509 (0.4%). Conflicting: 1/509 (0.2%). NoInfo: 1/509 (0.2%). Certain keep: 505/509 (99.2%) ########################## YDL054C (1461bp = 487AA) has 4 hits (MCH1) monocarboxylate permease homologue Spar (test2) orthologous hit at 89% f1461/1461 (100.0%) over 1461bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1434/1456 (98.5%) over 1461bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1424/1450 (98.2%) over 1453bp for offset 0 <== THIS IS REAL YDL054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/510 (0.4%). Conflicting: 1/510 (0.2%). NoInfo: 1/510 (0.2%). Certain keep: 506/510 (99.2%) ########################## YDL052C (912bp = 304AA) has 8 hits (SLC1) putative 1-acyl-sn-gylcerol-3-phosphat..ransferase (98) Spar (test2) orthologous hit at 93% f912/912 (100.0%) over 912bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f510/510 (100.0%) over 510bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f894/907 (98.6%) over 912bp for offset 0 <== THIS IS REAL YDL052C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL052C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/511 (0.4%). Conflicting: 1/511 (0.2%). NoInfo: 1/511 (0.2%). Certain keep: 507/511 (99.2%) ########################## YDL051W (828bp = 276AA) has 8 hits (LHP1) RNA binding protein similar to human L..utoantigen (93) Flanking ORFs are: YDL053C and YDL051W. YDL051W skipped ########################## YDL049C (807bp = 269AA) has 9 hits (KNH1) KRE9 homolog Spar (test2) orthologous hit at 88% f807/807 (100.0%) over 807bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f796/796 (100.0%) over 796bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f541/543 (99.6%) over 544bp for offset 0 <== THIS IS REAL YDL049C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL049C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/512 (0.4%). Conflicting: 1/512 (0.2%). NoInfo: 1/512 (0.2%). Certain keep: 508/512 (99.2%) ########################## YDL048C (1473bp = 491AA) has 17 hits (STP4) involved in tRNA splicing Spar (test2) orthologous hit at 89% f1468/1470 (99.9%) over 1473bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1456/1466 (99.3%) over 1473bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 73% f684/719 (95.1%) over 721bp for offset 0 <== THIS IS REAL YDL048C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL048C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/513 (0.4%). Conflicting: 1/513 (0.2%). NoInfo: 1/513 (0.2%). Certain keep: 509/513 (99.2%) ########################## YDL047W (936bp = 312AA) has 30 hits (SIT4) type 2A related protein phosphatase Spar (test2) orthologous hit at 92% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f558/854 (65.3%) over 854bp for offset 0 Sbay (test3) Longest island has f100 at 86% over 558bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 936 |________|_________|________|_________|_________|________|_________|________|_________|___| 100f 86% 296bp 100f 86% 558bp Sb793brk |===========================|ooooooooooooooooooooooooooooooooooooooooooooooooooooo> | YDL047W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL047W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/514 (0.4%). Conflicting: 1/514 (0.2%). NoInfo: 1/514 (0.2%). Certain keep: 510/514 (99.2%) ########################## YDL045W-A (288bp = 96AA) has 5 hits (MRP10) homologous to Yml37p, component of t.. ribosomes (122) Spar (test2) orthologous hit at 89% f288/288 (100.0%) over 288bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f288/288 (100.0%) over 288bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f283/287 (98.6%) over 288bp for offset 0 <== THIS IS REAL YDL045W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL045W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/515 (0.4%). Conflicting: 1/515 (0.2%). NoInfo: 1/515 (0.2%). Certain keep: 511/515 (99.2%) ########################## YDL045C (921bp = 307AA) has 3 hits (FAD1) FAD synthetase Spar (test2) orthologous hit at 91% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL YDL045C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL045C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/516 (0.4%). Conflicting: 1/516 (0.2%). NoInfo: 1/516 (0.2%). Certain keep: 512/516 (99.2%) ########################## YDL044C (1323bp = 441AA) has 8 hits (MTF2) involved in mRNA splicing Spar (test2) orthologous hit at 87% f1315/1321 (99.5%) over 1323bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1291/1317 (98.0%) over 1322bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f982/1294 (75.9%) over 1323bp for offset 0 Sbay (test3) Longest island has f97 at 78% over 787bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k1k |_____|______|______|______|______|_____|______|______|______|______|_____|______|______|_| 97f 78% 787bp Sb792full |.....................................|===================================================|=> YDL044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/517 (0.4%). Conflicting: 1/517 (0.2%). NoInfo: 1/517 (0.2%). Certain keep: 513/517 (99.2%) ########################## YDL043C (801bp = 267AA) has 8 hits (PRP11) snRNA-associated protein Spar (test2) orthologous hit at 85% f801/801 (100.0%) over 801bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f684/757 (90.4%) over 759bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f772/796 (97.0%) over 801bp for offset 0 <== THIS IS REAL YDL043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/518 (0.4%). Conflicting: 1/518 (0.2%). NoInfo: 1/518 (0.2%). Certain keep: 514/518 (99.2%) ########################## YDL042C (1689bp = 563AA) has 19 hits (SIR2) regulator of silencing at HML, HMR, .., and rDNA (99) Flanking ORFs are: YDL044C and YDL042C. YDL042C skipped ########################## YDL041W (354bp = 118AA) has 5 hits (KRE26) Hypothetical ORF Flanking ORFs are: YDL044C and YDL042C. YDL041W skipped ########################## YDL040C (2565bp = 855AA) has 10 hits (NAT1) N-terminal acetyltransferase Spar (test2) orthologous hit at 89% f2563/2564 (100.0%) over 2564bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1781/1781 (100.0%) over 1781bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2535/2553 (99.3%) over 2555bp for offset 0 <== THIS IS REAL YDL040C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL040C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/519 (0.4%). Conflicting: 1/519 (0.2%). NoInfo: 1/519 (0.2%). Certain keep: 515/519 (99.2%) ########################## YDL039C (348bp = 116AA) has 5 hits (PRM7) Flanking ORFs are: YDL041W and YDL039C. YDL039C skipped ########################## YDL035C (2886bp = 962AA) has 1611 hits (GPR1) G-protein coupled receptor Flanking ORFs are: YDL041W and YDL039C. YDL035C skipped ########################## YDL031W (2988bp = 996AA) has 143 hits (DBP10) similar to RNA helicases Spar (test2) orthologous hit at 90% f2961/2987 (99.1%) over 2988bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2807/2903 (96.7%) over 2922bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2768/2831 (97.8%) over 2838bp for offset 0 <== THIS IS REAL YDL031W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL031W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/520 (0.4%). Conflicting: 1/520 (0.2%). NoInfo: 1/520 (0.2%). Certain keep: 516/520 (99.2%) ########################## YDL030W (1593bp = 531AA) has 22 hits (PRP9) RNA splicing factor Spar (test2) orthologous hit at 87% f1588/1592 (99.7%) over 1593bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1566/1588 (98.6%) over 1593bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1541/1586 (97.2%) over 1593bp for offset 0 <== THIS IS REAL YDL030W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL030W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/521 (0.4%). Conflicting: 1/521 (0.2%). NoInfo: 1/521 (0.2%). Certain keep: 517/521 (99.2%) ########################## YDL028C (2295bp = 765AA) has 35 hits (MPS1) serine/threonine/tyrosine protein ki..n in vivo. (289) Spar (test2) orthologous hit at 90% f2286/2294 (99.7%) over 2295bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1536/1573 (97.6%) over 1575bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2258/2289 (98.6%) over 2295bp for offset 0 <== THIS IS REAL YDL028C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL028C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/522 (0.4%). Conflicting: 1/522 (0.2%). NoInfo: 1/522 (0.2%). Certain keep: 518/522 (99.2%) ########################## YDL024C (1407bp = 469AA) has 17 hits (DIA3) involved in invasive and pseudohyphal growth Spar (test2) orthologous hit at 86% f1394/1404 (99.3%) over 1407bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 67% f159/233 (68.2%) over 247bp for offset 0 Smik (test3) Longest island has f85 at 72% over 163bp Sbay (test2) non-orthologous hit at 66% f1238/1379 (89.8%) over 1407bp for offset 0 Sbay (test3) Longest island has f89 at 67% over 977bp Sbay (test2) non-orthologous hit at 66% f1242/1379 (90.1%) over 1406bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 11k |_____|_____|______|_____|_____|______|_____|______|_____|_____|______|_____|______|_____|| 85f 72% 163176f 62% 29bp Sm709full |.|ooooooooo>||=> | 89f 67% 977bp 93f 69% 301bp Sb10full |.......|==============================================================>|=================|> YDL024C: kill: Smik - keep: Spar Sbay YDL024C - Conflicting. Kill (Smik) and Keep (Spar Sbay) Current total: Certain kills: 2/523 (0.4%). Conflicting: 2/523 (0.4%). NoInfo: 1/523 (0.2%). Certain keep: 518/523 (99.0%) ########################## YDL022W (1176bp = 392AA) has 8 hits (GPD1) glycerol-3-phosphate dehydrogenase Flanking ORFs are: YDL025C and YDL023C. YDL022W skipped ########################## YDL021W (936bp = 312AA) has 20 hits (GPM2) phosphoglycerate mutase, involved in glycolysis Spar (test2) orthologous hit at 90% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f243/363 (66.9%) over 371bp for offset 1 Smik (test3) Longest island has f100 at 89% over 227bp Smik (test2) orthologous hit at 86% f90/128 (70.3%) over 128bp for offset 0 Smik (test3) Longest island has f100 at 84% over 90bp Sbay (test2) orthologous hit at 83% f927/934 (99.3%) over 936bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 936 |________|_________|________|_________|_________|________|_________|________|_________|___| 100f 89% 227bp Sm710brk |.............|ooooooooooooooooooooo| 100f 84%100f 95% 38bp Sm709brk |=======|ooo> | YDL021W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDL021W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/524 (0.4%). Conflicting: 2/524 (0.4%). NoInfo: 1/524 (0.2%). Certain keep: 519/524 (99.0%) ########################## YDL020C (1596bp = 532AA) has 47 hits (RPN4) ubiquitin-mediated 26S proteasome subunit Spar (test2) orthologous hit at 88% f927/927 (100.0%) over 927bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f702/728 (96.4%) over 734bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1129/1268 (89.0%) over 1287bp for offset 0 Sbay (test3) Longest island has f97 at 78% over 715bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k |____|_____|____|_____|_____|____|_____|_____|____|_____|_____|____|_____|____|_____|_____| 97f 82% 385bp 97f 78% 715bp Sb621full |.|====================>..........|======================================|> YDL020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/525 (0.4%). Conflicting: 2/525 (0.4%). NoInfo: 1/525 (0.2%). Certain keep: 520/525 (99.0%) ########################## YDL019C (3852bp = 1284AA) has 44 hits (OSH2) Oxysterol Binding Protein Spar (test2) orthologous hit at 90% f3588/3847 (93.3%) over 3851bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1577/1583 (99.6%) over 1584bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1348/1392 (96.8%) over 1392bp for offset 2 <== THIS IS REAL YDL019C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL019C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/526 (0.4%). Conflicting: 2/526 (0.4%). NoInfo: 1/526 (0.2%). Certain keep: 521/526 (99.0%) ########################## YDL018C (678bp = 226AA) has 5 hits (ERP3) p24 protein involved in membrane trafficking Spar (test2) orthologous hit at 91% f678/678 (100.0%) over 678bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f677/677 (100.0%) over 677bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f678/678 (100.0%) over 678bp for offset 0 <== THIS IS REAL YDL018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/527 (0.4%). Conflicting: 2/527 (0.4%). NoInfo: 1/527 (0.2%). Certain keep: 522/527 (99.1%) ########################## YDL017W (1524bp = 508AA) has 30 hits (CDC7) serine/threonine protein kinase Flanking ORFs are: YDL019C and YDL017W. YDL017W skipped ########################## YDL015C (933bp = 311AA) has 11 hits (TSC13) ER protein involved in very long cha.. synthesis (103) Spar (test2) orthologous hit at 93% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f449/449 (100.0%) over 449bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f926/932 (99.4%) over 933bp for offset 0 <== THIS IS REAL YDL015C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL015C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/528 (0.4%). Conflicting: 2/528 (0.4%). NoInfo: 1/528 (0.2%). Certain keep: 523/528 (99.1%) ########################## YDL014W (984bp = 328AA) has 56 hits (NOP1) nucleolar protein, homologous to mamm..ibrillarin (97) Spar (test2) orthologous hit at 87% f959/968 (99.1%) over 976bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f804/815 (98.7%) over 822bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f960/961 (99.9%) over 970bp for offset 0 <== THIS IS REAL YDL014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/529 (0.4%). Conflicting: 2/529 (0.4%). NoInfo: 1/529 (0.2%). Certain keep: 524/529 (99.1%) ########################## YDL013W (1860bp = 620AA) has 11 hits (HEX3) involved in hexose metabolism Spar (test2) orthologous hit at 90% f1435/1481 (96.9%) over 1485bp for offset 1 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1485/1488 (99.8%) over 1489bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1192/1196 (99.7%) over 1197bp for offset 0 <== THIS IS REAL YDL013W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL013W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/530 (0.4%). Conflicting: 2/530 (0.4%). NoInfo: 1/530 (0.2%). Certain keep: 525/530 (99.1%) ########################## YDL008W (498bp = 166AA) has 4 hits (APC11) subunit of the anaphase promoting complex (APC) Spar (test2) orthologous hit at 91% f492/497 (99.0%) over 498bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f495/497 (99.6%) over 498bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f489/496 (98.6%) over 498bp for offset 0 <== THIS IS REAL YDL008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/531 (0.4%). Conflicting: 2/531 (0.4%). NoInfo: 1/531 (0.2%). Certain keep: 526/531 (99.1%) ########################## YDL007W (1314bp = 438AA) has 57 hits (RPT2) (putative) 26S protease subunit Spar (test2) orthologous hit at 94% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL YDL007W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL007W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/532 (0.4%). Conflicting: 2/532 (0.4%). NoInfo: 1/532 (0.2%). Certain keep: 527/532 (99.1%) ########################## YDL006W (846bp = 282AA) has 7 hits (PTC1) serine-threonine protein phosphatase Spar (test2) orthologous hit at 92% f846/846 (100.0%) over 846bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f846/846 (100.0%) over 846bp for offset 0 <== THIS IS REAL YDL006W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL006W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/533 (0.4%). Conflicting: 2/533 (0.4%). NoInfo: 1/533 (0.2%). Certain keep: 528/533 (99.1%) ########################## YDL005C (1296bp = 432AA) has 1111 hits (MED2) Stoichiometric member of mediator complex Spar (test2) orthologous hit at 83% f1084/1096 (98.9%) over 1104bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1108/1117 (99.2%) over 1126bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 59% f599/921 (65.0%) over 951bp for offset 0 Sbay (test3) Longest island has f94 at 70% over 403bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |_____|______|______|______|______|______|______|______|______|______|______|______|______| 94f 70% 403bp Sb1065ful |.......................................|=========================|=> YDL005C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL005C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/534 (0.4%). Conflicting: 2/534 (0.4%). NoInfo: 1/534 (0.2%). Certain keep: 529/534 (99.1%) ########################## YDL004W (483bp = 161AA) has 5 hits (ATP16) ATP synthase delta subunit Spar (test2) orthologous hit at 89% f480/480 (100.0%) over 483bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f482/482 (100.0%) over 482bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f482/482 (100.0%) over 482bp for offset 0 <== THIS IS REAL YDL004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/535 (0.4%). Conflicting: 2/535 (0.4%). NoInfo: 1/535 (0.2%). Certain keep: 530/535 (99.1%) ########################## YDL003W (1701bp = 567AA) has 14 hits (MCD1) involved in mitosis, similar to pombe Rad21 Spar (test2) orthologous hit at 86% f1694/1695 (99.9%) over 1701bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1678/1696 (98.9%) over 1701bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1595/1689 (94.4%) over 1701bp for offset 1 <== THIS IS REAL YDL003W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL003W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/536 (0.4%). Conflicting: 2/536 (0.4%). NoInfo: 1/536 (0.2%). Certain keep: 531/536 (99.1%) ########################## YDL002C (612bp = 204AA) has 38 hits (NHP10) HMG1-box containing protein Spar (test2) orthologous hit at 91% f612/612 (100.0%) over 612bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f526/526 (100.0%) over 526bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f605/610 (99.2%) over 611bp for offset 0 <== THIS IS REAL YDL002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDL002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/537 (0.4%). Conflicting: 2/537 (0.4%). NoInfo: 1/537 (0.2%). Certain keep: 532/537 (99.1%) ########################## YDR001C (2256bp = 752AA) has 12 hits (NTH1) neutral trehalase Spar (test2) orthologous hit at 93% f2256/2256 (100.0%) over 2256bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2256/2256 (100.0%) over 2256bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2246/2253 (99.7%) over 2255bp for offset 0 <== THIS IS REAL YDR001C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR001C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/538 (0.4%). Conflicting: 2/538 (0.4%). NoInfo: 1/538 (0.2%). Certain keep: 533/538 (99.1%) ########################## YDR002W (606bp = 202AA) has 23 hits (YRB1) nuclear GTPase-activating protein for Ran Spar (test2) orthologous hit at 94% f606/606 (100.0%) over 606bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f606/606 (100.0%) over 606bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f369/369 (100.0%) over 369bp for offset 0 <== THIS IS REAL YDR002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/539 (0.4%). Conflicting: 2/539 (0.4%). NoInfo: 1/539 (0.2%). Certain keep: 534/539 (99.1%) ########################## YDR004W (1383bp = 461AA) has 7 hits (RAD57) RecA homolog (similar to DMC1, RAD51..d analysis (139) Spar (test2) orthologous hit at 89% f1372/1382 (99.3%) over 1383bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1325/1336 (99.2%) over 1337bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1307/1380 (94.7%) over 1383bp for offset 2 <== THIS IS REAL YDR004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/540 (0.4%). Conflicting: 2/540 (0.4%). NoInfo: 1/540 (0.2%). Certain keep: 535/540 (99.1%) ########################## YDR006C (2706bp = 902AA) has 15 hits (SOK1) high copy suppressor of cAMP-depende.. mutations (131) Spar (test2) orthologous hit at 92% f2698/2705 (99.7%) over 2706bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2680/2703 (99.1%) over 2706bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2164/2193 (98.7%) over 2207bp for offset 0 <== THIS IS REAL YDR006C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR006C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/541 (0.4%). Conflicting: 2/541 (0.4%). NoInfo: 1/541 (0.2%). Certain keep: 536/541 (99.1%) ########################## YDR007W (675bp = 225AA) has 4 hits (TRP1) n-(5'-phosphoribosyl)-anthranilate isomerase Flanking ORFs are: YDR005C and YDR007W. YDR007W skipped ########################## YDR009W (1563bp = 521AA) has 7 hits (GAL3) involved in galactose induction of GAL genes Spar (test2) non-orthologous hit at 90% f1563/1563 (100.0%) over 1563bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1546/1561 (99.0%) over 1563bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1514/1557 (97.2%) over 1563bp for offset 0 <== THIS IS REAL YDR009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/542 (0.4%). Conflicting: 2/542 (0.4%). NoInfo: 1/542 (0.2%). Certain keep: 537/542 (99.1%) ########################## YDR011W (4506bp = 1502AA) has 99 hits (SNQ2) ABC transporter Spar (test2) orthologous hit at 91% f4501/4505 (99.9%) over 4506bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f3949/3958 (99.8%) over 3960bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f2754/2757 (99.9%) over 2758bp for offset 0 <== THIS IS REAL YDR011W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR011W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/543 (0.4%). Conflicting: 2/543 (0.4%). NoInfo: 1/543 (0.2%). Certain keep: 538/543 (99.1%) ########################## YDR012W (1089bp = 363AA) has 10 hits (RPL4B) Ribosomal protein L4B (L2B) (rp2) (YL2) Spar (test2) orthologous hit at 96% f1089/1089 (100.0%) over 1089bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 93% f251/269 (93.3%) over 270bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f1088/1088 (100.0%) over 1088bp for offset 0 <== THIS IS REAL YDR012W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR012W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/544 (0.4%). Conflicting: 2/544 (0.4%). NoInfo: 1/544 (0.2%). Certain keep: 539/544 (99.1%) ########################## YDR014W (1944bp = 648AA) has 92 hits (RAD61) Affects radiation sensitivity Spar (test2) orthologous hit at 84% f1933/1943 (99.5%) over 1944bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f228/312 (73.1%) over 313bp for offset 0 Smik (test3) Longest island has f100 at 74% over 228bp Sbay (test2) orthologous hit at 72% f1793/1888 (95.0%) over 1913bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|____|___|____|____|___|____|___|____|____|___|____|____|___|____|___|__| 100f 74% 228bp Sm723brk |=========>...> | YDR014W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR014W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/545 (0.4%). Conflicting: 2/545 (0.4%). NoInfo: 1/545 (0.2%). Certain keep: 540/545 (99.1%) ########################## YDR016C (285bp = 95AA) has 4 hits (DAD1) Duo1 And Dam1 interacting; localized to..ole bodies (126) Spar (test2) orthologous hit at 90% f280/280 (100.0%) over 280bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 57% f99/252 (39.3%) over 272bp for offset 1 Smik (test3) Longest island has f76 at 61% over 76bp Smik (test2) non-orthologous hit at 58% f77/197 (39.1%) over 213bp for offset 0 Smik (test3) Longest island has f85 at 53% over 34bp Sbay (test2) non-orthologous hit at 79% f282/282 (100.0%) over 282bp for offset 0 <== THIS IS REAL 0 100 200 285 |______________________________|_______________________________|__________________________| 89f 59% 37bp76f 61% 76bp 80f 44% 41bp 78f 67% 27bp 100f 59Sm117full |....|xxxxxxxxxxx>=======================>|ooooooooooo>.............|xxxxxxx>......|ooooo>| 100f 59% 22bp 60f 60% 3085f 53% 34b79f 53% 19bp 100f 79% 33bp Sm804full |.....|ooooo>..........|xxxxxxxx>|=========>|ooooo>.........|ooooooooo> | YDR016C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR016C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/546 (0.4%). Conflicting: 2/546 (0.4%). NoInfo: 1/546 (0.2%). Certain keep: 541/546 (99.1%) ########################## YDR017C (3153bp = 1051AA) has 15 hits (KCS1) Shows homology to basic leucine zip..on factors (115) Spar (test2) orthologous hit at 90% f1937/1937 (100.0%) over 1937bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f624/630 (99.0%) over 632bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1930/2625 (73.5%) over 2652bp for offset 0 Sbay (test3) Longest island has f98 at 78% over 1509bp <== THIS IS REAL 0 100200300400500607008009001k 1k 1k 1k1k 1k 1k 1k 1k 1k 2k2k 2k 2k 2k 2k 2k 2k2k 2k 3k 3k3k |_|__|__|__|__|__|_|__|__|__|__|__|__|_|__|__|__|__|__|__|_|__|__|__|__|__|__|_|__|__|__|_| 95f 75% 365bp 98f 78% 1509bp 99f 81% 436bSb809brk |=========>..........|==========================================|ooooooooooo| YDR017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/547 (0.4%). Conflicting: 2/547 (0.4%). NoInfo: 1/547 (0.2%). Certain keep: 542/547 (99.1%) ########################## YDR019C (1203bp = 401AA) has 4 hits (GCV1) glycine cleavage T protein (T subunit..se complex (113) Spar (test2) orthologous hit at 90% f1199/1199 (100.0%) over 1202bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1195/1201 (99.5%) over 1202bp for offset 0 <== THIS IS REAL YDR019C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDR019C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/548 (0.4%). Conflicting: 2/548 (0.4%). NoInfo: 1/548 (0.2%). Certain keep: 543/548 (99.1%) ########################## YDR021W (1200bp = 400AA) has 47 hits (FAL1) DEAD-box protein, putative RNA helicase Spar (test2) orthologous hit at 92% f1200/1200 (100.0%) over 1200bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1200/1200 (100.0%) over 1200bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1200/1200 (100.0%) over 1200bp for offset 0 <== THIS IS REAL YDR021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/549 (0.4%). Conflicting: 2/549 (0.4%). NoInfo: 1/549 (0.2%). Certain keep: 544/549 (99.1%) ########################## YDR022C (591bp = 197AA) has 21 hits (CIS1) involved in microtubule assembly Spar (test2) orthologous hit at 87% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f580/589 (98.5%) over 591bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f421/440 (95.7%) over 445bp for offset 0 <== THIS IS REAL YDR022C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR022C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/550 (0.4%). Conflicting: 2/550 (0.4%). NoInfo: 1/550 (0.2%). Certain keep: 545/550 (99.1%) ########################## YDR023W (1389bp = 463AA) has 19 hits (SES1) seryl-tRNA synthetase Spar (test2) non-orthologous hit at 53% f633/1212 (52.2%) over 1279bp for offset 0 Spar (test3) Longest island has f78 at 55% over 174bp Spar (test2) non-orthologous hit at 93% f733/733 (100.0%) over 733bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f882/931 (94.7%) over 931bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 86% f851/851 (100.0%) over 851bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|_____|______|_____|______|_____|______|_____|______|_____|______|_____|______|_____| 84f 60% 88b78f 55% 174b82f 54%93f Sp37full |...................................................|ooooo>....|oooooooooo>|oooo>.|ooo|> YDR023W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR023W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/551 (0.4%). Conflicting: 2/551 (0.4%). NoInfo: 1/551 (0.2%). Certain keep: 546/551 (99.1%) ########################## YDR024W (486bp = 162AA) has 6 hits (FYV1) Hypothetical ORF Spar (test2) orthologous hit at 73% f106/286 (37.1%) over 299bp for offset 2 Spar (test3) Longest island has f93 at 74% over 82bp Spar (test2) orthologous hit at 82% f94/175 (53.7%) over 181bp for offset 1 Spar (test3) Longest island has f89 at 85% over 99bp Smik (test2) non-orthologous hit at 66% f212/470 (45.1%) over 486bp for offset 0 Smik (test3) Longest island has f81 at 69% over 114bp Sbay (test2) orthologous hit at 66% f126/247 (51.0%) over 252bp for offset 0 Sbay (test3) Longest island has f93 at 70% over 113bp 0 100 200 300 400 486 |_________________|__________________|_________________|__________________|_______________| 79f 73% 63bp 93f 82% 56bp 93f 74% 82bp 100f 67% 27bp Sp135brk |==========>...|ooooooooo>.......|xxxxxxxxxxxxxx|oooo>.> | 74f 71%100f 91% 89f 85% 99bp Sp135full |======|xxxxxxx>|ooooooooooooooooo| 100f 82% 34bp 73f 53% 60bp 100f 6981f 69% 114bp 80f 68% 91bp Sm728full |=====>..................|==========>............|ooooo>|====================|xxxxxxxxxxxx|xxx> 100f 58% 19bp 100f 6100f93f 70% 113bp Sb894full |.|oo>...........|ooooo|===|xxxxxxxxxxxxxxxxxxx|> YDR024W: kill: - keep: YDR024W - Not enough info. Kill () and Keep () Current total: Certain kills: 2/552 (0.4%). Conflicting: 2/552 (0.4%). NoInfo: 2/552 (0.4%). Certain keep: 546/552 (98.9%) ########################## YDR027C (2670bp = 890AA) has 19 hits (LUV1) involved in vacuole biogenesis Spar (test2) orthologous hit at 89% f1606/1632 (98.4%) over 1635bp for offset 1 <== THIS IS REAL Smik (test2) non-orthologous hit at 73% f491/670 (73.3%) over 686bp for offset 1 Smik (test3) Longest island has f99 at 86% over 410bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1457/1482 (98.3%) over 1487bp for offset 0 <== THIS IS REAL 0 100200 300400500 600700800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k |__|__|___|__|__|___|__|__|___|__|___|__|__|___|__|__|___|__|___|__|__|___|__|__|___|__|__| 99f 86% 410bp Sm731brk |........|=============> | YDR027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/553 (0.4%). Conflicting: 2/553 (0.4%). NoInfo: 2/553 (0.4%). Certain keep: 547/553 (98.9%) ########################## YDR028C (3045bp = 1015AA) has 69 hits (REG1) regulator of phosphatase Glc7p, inv..repression (107) Spar (test2) orthologous hit at 87% f2428/2524 (96.2%) over 2535bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 75% f1396/1636 (85.3%) over 1666bp for offset 1 Smik (test3) Longest island has f96 at 82% over 1323bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 73% f1671/1869 (89.4%) over 1893bp for offset 0 Sbay (test3) Longest island has f95 at 78% over 986bp <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k2k 2k 2k 2k 2k 2k 2k 3k3k |_|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|_| 96f 82% 1323bp Sm1278brk |..........|oooooooooooooooooooooooooooooooooooooo> | 94f 75% 2595f 78% 986bp 94f 74% 452bpSb895full |...|======>..|============================>|============| YDR028C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR028C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/554 (0.4%). Conflicting: 2/554 (0.4%). NoInfo: 2/554 (0.4%). Certain keep: 548/554 (98.9%) ########################## YDR030C (1521bp = 507AA) has 7 hits (RAD28) involved in DNA repair, has WD repeats Spar (test2) orthologous hit at 87% f1504/1518 (99.1%) over 1521bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1466/1514 (96.8%) over 1521bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1457/1512 (96.4%) over 1521bp for offset 0 <== THIS IS REAL YDR030C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR030C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/555 (0.4%). Conflicting: 2/555 (0.4%). NoInfo: 2/555 (0.4%). Certain keep: 549/555 (98.9%) ########################## YDR032C (597bp = 199AA) has 12 hits (PST2) Protoplasts-SecreTed protein; the gen..rotoplasts (158) Spar (test2) orthologous hit at 93% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL YDR032C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR032C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/556 (0.4%). Conflicting: 2/556 (0.4%). NoInfo: 2/556 (0.4%). Certain keep: 550/556 (98.9%) ########################## YDR033W (963bp = 321AA) has 18 hits (MRH1) Membrane protein Related to Hsp30p; L..nostained. (324) Spar (test2) orthologous hit at 95% f962/962 (100.0%) over 962bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 91% f962/962 (100.0%) over 962bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f961/962 (99.9%) over 962bp for offset 0 <== THIS IS REAL YDR033W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR033W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/557 (0.4%). Conflicting: 2/557 (0.4%). NoInfo: 2/557 (0.4%). Certain keep: 551/557 (98.9%) ########################## YDR034C (2373bp = 791AA) has 35 hits (LYS14) transcription factor involved in ly..osynthesis (97) Spar (test2) orthologous hit at 89% f2056/2070 (99.3%) over 2070bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1591/1591 (100.0%) over 1591bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2069/2153 (96.1%) over 2166bp for offset 1 <== THIS IS REAL YDR034C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR034C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/558 (0.4%). Conflicting: 2/558 (0.4%). NoInfo: 2/558 (0.4%). Certain keep: 552/558 (98.9%) ########################## YDR035W (1113bp = 371AA) has 14 hits (ARO3) DAHP synthase; a.k.a. phospho-2-dehy..e synthase (274) Spar (test2) orthologous hit at 96% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f763/763 (100.0%) over 763bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1112/1112 (100.0%) over 1112bp for offset 0 <== THIS IS REAL YDR035W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR035W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/559 (0.4%). Conflicting: 2/559 (0.4%). NoInfo: 2/559 (0.4%). Certain keep: 553/559 (98.9%) ########################## YDR037W (1776bp = 592AA) has 17 hits (KRS1) lysyl-tRNA synthetase Spar (test2) orthologous hit at 99% f1776/1776 (100.0%) over 1776bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 89% f1776/1776 (100.0%) over 1776bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1776/1776 (100.0%) over 1776bp for offset 0 <== THIS IS REAL YDR037W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR037W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/560 (0.4%). Conflicting: 2/560 (0.4%). NoInfo: 2/560 (0.4%). Certain keep: 554/560 (98.9%) ########################## YDR038C (3276bp = 1092AA) has 48 hits (ENA5) Na(+) ATPase Spar (test2) orthologous hit at 96% f2148/2148 (100.0%) over 2148bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3263/3274 (99.7%) over 3276bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f664/683 (97.2%) over 687bp for offset 1 <== THIS IS REAL YDR038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/561 (0.4%). Conflicting: 2/561 (0.4%). NoInfo: 2/561 (0.4%). Certain keep: 555/561 (98.9%) ########################## YDR039C (3276bp = 1092AA) has 48 hits (ENA2) plasma membrane protein; putative N..ype ATPase (102) Spar (test2) non-orthologous hit at 95% f2148/2148 (100.0%) over 2148bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f3263/3274 (99.7%) over 3276bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 78% f1477/1489 (99.2%) over 1493bp for offset 0 <== THIS IS REAL YDR039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/562 (0.4%). Conflicting: 2/562 (0.4%). NoInfo: 2/562 (0.4%). Certain keep: 556/562 (98.9%) ########################## YDR040C (3276bp = 1092AA) has 50 hits (ENA1) Plasma membrane Na+ pump; P-type ATPase Spar (test2) orthologous hit at 94% f1204/1209 (99.6%) over 1211bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3263/3274 (99.7%) over 3276bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1477/1489 (99.2%) over 1493bp for offset 0 <== THIS IS REAL YDR040C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR040C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/563 (0.4%). Conflicting: 2/563 (0.4%). NoInfo: 2/563 (0.4%). Certain keep: 557/563 (98.9%) ########################## YDR041W (612bp = 204AA) has 6 hits (RSM10) mitochondrial ribosome small subunit component Spar (test2) non-orthologous hit at 88% f593/605 (98.0%) over 606bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f603/611 (98.7%) over 612bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f612/612 (100.0%) over 612bp for offset 0 <== THIS IS REAL YDR041W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR041W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/564 (0.4%). Conflicting: 2/564 (0.4%). NoInfo: 2/564 (0.4%). Certain keep: 558/564 (98.9%) ########################## YDR043C (696bp = 232AA) has 16 hits (NRG1) transcriptional repressor which can b..with Ssn6p (147) Spar (test2) orthologous hit at 90% f696/696 (100.0%) over 696bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f696/696 (100.0%) over 696bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f691/695 (99.4%) over 696bp for offset 0 <== THIS IS REAL YDR043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/565 (0.4%). Conflicting: 2/565 (0.4%). NoInfo: 2/565 (0.4%). Certain keep: 559/565 (98.9%) ########################## YDR044W (987bp = 329AA) has 7 hits (HEM13) Coproporphyrinogen III oxidase Spar (test2) orthologous hit at 93% f986/986 (100.0%) over 986bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f289/289 (100.0%) over 289bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f987/987 (100.0%) over 987bp for offset 0 <== THIS IS REAL YDR044W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR044W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/566 (0.4%). Conflicting: 2/566 (0.4%). NoInfo: 2/566 (0.4%). Certain keep: 560/566 (98.9%) ########################## YDR045C (333bp = 111AA) has 5 hits (RPC11) TFIIS-like small Pol III subunit C11 Spar (test2) orthologous hit at 95% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 91% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL YDR045C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR045C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/567 (0.4%). Conflicting: 2/567 (0.4%). NoInfo: 2/567 (0.4%). Certain keep: 561/567 (98.9%) ########################## YDR046C (1815bp = 605AA) has 44 hits (BAP3) Valine transporter Spar (test2) orthologous hit at 90% f1815/1815 (100.0%) over 1815bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f745/745 (100.0%) over 745bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1814/1814 (100.0%) over 1814bp for offset 0 <== THIS IS REAL YDR046C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR046C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/568 (0.4%). Conflicting: 2/568 (0.4%). NoInfo: 2/568 (0.4%). Certain keep: 562/568 (98.9%) ########################## YDR047W (1089bp = 363AA) has 5 hits (HEM12) uroporphyrinogen decarboxylase Spar (test2) orthologous hit at 91% f1088/1088 (100.0%) over 1088bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f569/569 (100.0%) over 569bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1086/1088 (99.8%) over 1088bp for offset 0 <== THIS IS REAL YDR047W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR047W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/569 (0.4%). Conflicting: 2/569 (0.4%). NoInfo: 2/569 (0.4%). Certain keep: 563/569 (98.9%) ########################## YDR050C (747bp = 249AA) has 5 hits (TPI1) triosephosphate isomerase Spar (test2) orthologous hit at 97% f747/747 (100.0%) over 747bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 95% f219/219 (100.0%) over 219bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f313/331 (94.6%) over 332bp for offset 0 <== THIS IS REAL YDR050C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR050C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/570 (0.4%). Conflicting: 2/570 (0.4%). NoInfo: 2/570 (0.4%). Certain keep: 564/570 (98.9%) ########################## YDR052C (2115bp = 705AA) has 25 hits (DBF4) Regulatory subunit of Cdc7p-Dbf4p ki..se complex (92) Flanking ORFs are: YDR049W and YDR051C. YDR052C skipped ########################## YDR054C (888bp = 296AA) has 191 hits (CDC34) ubiquitin-conjugating enzyme, E2 Spar (test2) orthologous hit at 94% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f884/888 (99.5%) over 888bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f886/888 (99.8%) over 888bp for offset 0 <== THIS IS REAL YDR054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/571 (0.4%). Conflicting: 2/571 (0.4%). NoInfo: 2/571 (0.4%). Certain keep: 565/571 (98.9%) ########################## YDR055W (1335bp = 445AA) has 11 hits (PST1) The gene product has been detected a..rotoplasts (134) Spar (test2) orthologous hit at 89% f1249/1249 (100.0%) over 1249bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1063/1070 (99.3%) over 1072bp for offset 0 <== THIS IS REAL YDR055W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR055W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/572 (0.3%). Conflicting: 2/572 (0.3%). NoInfo: 2/572 (0.3%). Certain keep: 566/572 (99.0%) ########################## YDR058C (981bp = 327AA) has 10 hits (TGL2) Triglyceride Lipase Spar (test2) orthologous hit at 90% f981/981 (100.0%) over 981bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f911/980 (93.0%) over 981bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f966/979 (98.7%) over 981bp for offset 0 <== THIS IS REAL YDR058C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR058C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/573 (0.3%). Conflicting: 2/573 (0.3%). NoInfo: 2/573 (0.3%). Certain keep: 567/573 (99.0%) ########################## YDR060W (3078bp = 1026AA) has 218 hits (MAK21) protein required for 60S ribosoma..biogenesis (100) Spar (test2) orthologous hit at 86% f2672/2713 (98.5%) over 2717bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 71% f436/554 (78.7%) over 564bp for offset 1 Smik (test3) Longest island has f95 at 76% over 409bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2621/2827 (92.7%) over 2853bp for offset 1 <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k2k 2k 2k 3k 3k |_|__|__|__|__|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__|__|__|__|__|_|__|__|__|__| 95f 76% 409bp Sm870brk |==========>....> | YDR060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/574 (0.3%). Conflicting: 2/574 (0.3%). NoInfo: 2/574 (0.3%). Certain keep: 568/574 (99.0%) ########################## YDR062W (1686bp = 562AA) has 9 hits (LCB2) Probable component of serine palmitoy..ingolipids (168) Spar (test2) orthologous hit at 92% f1686/1686 (100.0%) over 1686bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1639/1650 (99.3%) over 1653bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1674/1683 (99.5%) over 1686bp for offset 0 <== THIS IS REAL YDR062W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR062W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/575 (0.3%). Conflicting: 2/575 (0.3%). NoInfo: 2/575 (0.3%). Certain keep: 569/575 (99.0%) ########################## YDR068W (933bp = 311AA) has 330 hits (DOS2) Product of gene unknown Spar (test2) orthologous hit at 85% f908/911 (99.7%) over 915bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f358/378 (94.7%) over 384bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f798/855 (93.3%) over 869bp for offset 0 <== THIS IS REAL YDR068W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR068W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/576 (0.3%). Conflicting: 2/576 (0.3%). NoInfo: 2/576 (0.3%). Certain keep: 570/576 (99.0%) ########################## YDR069C (2781bp = 927AA) has 59 hits (DOA4) ubiquitin isopeptidase Spar (test2) orthologous hit at 90% f2777/2780 (99.9%) over 2781bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f1665/1669 (99.8%) over 1670bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2743/2774 (98.9%) over 2781bp for offset 0 <== THIS IS REAL YDR069C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR069C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/577 (0.3%). Conflicting: 2/577 (0.3%). NoInfo: 2/577 (0.3%). Certain keep: 571/577 (99.0%) ########################## YDR072C (1584bp = 528AA) has 8 hits (IPT1) inositolphosphotransferase 1 Spar (test2) orthologous hit at 91% f1576/1582 (99.6%) over 1584bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1566/1581 (99.1%) over 1584bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1550/1576 (98.4%) over 1584bp for offset 0 <== THIS IS REAL YDR072C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR072C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/578 (0.3%). Conflicting: 2/578 (0.3%). NoInfo: 2/578 (0.3%). Certain keep: 572/578 (99.0%) ########################## YDR073W (510bp = 170AA) has 78 hits (SNF11) component of SWI/SNF global transcri..or complex (103) Spar (test2) orthologous hit at 89% f424/424 (100.0%) over 424bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f431/432 (99.8%) over 435bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 73% f470/505 (93.1%) over 508bp for offset 0 <== THIS IS REAL YDR073W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR073W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/579 (0.3%). Conflicting: 2/579 (0.3%). NoInfo: 2/579 (0.3%). Certain keep: 573/579 (99.0%) ########################## YDR074W (2691bp = 897AA) has 21 hits (TPS2) Trehalose-6-phosphate phosphatase Spar (test2) orthologous hit at 91% f2691/2691 (100.0%) over 2691bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2691/2691 (100.0%) over 2691bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL YDR074W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR074W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/580 (0.3%). Conflicting: 2/580 (0.3%). NoInfo: 2/580 (0.3%). Certain keep: 574/580 (99.0%) ########################## YDR075W (927bp = 309AA) has 36 hits (PPH3) protein phosphatase type 2A Spar (test2) orthologous hit at 92% f927/927 (100.0%) over 927bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f655/662 (98.9%) over 663bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f916/926 (98.9%) over 927bp for offset 0 <== THIS IS REAL YDR075W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR075W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/581 (0.3%). Conflicting: 2/581 (0.3%). NoInfo: 2/581 (0.3%). Certain keep: 575/581 (99.0%) ########################## YDR076W (1221bp = 407AA) has 8 hits (RAD55) RecA homolog (related to DMC1, RAD51..d analysis (145) Spar (test2) orthologous hit at 89% f1221/1221 (100.0%) over 1221bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1217/1220 (99.8%) over 1221bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1201/1216 (98.8%) over 1221bp for offset 0 <== THIS IS REAL YDR076W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR076W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/582 (0.3%). Conflicting: 2/582 (0.3%). NoInfo: 2/582 (0.3%). Certain keep: 576/582 (99.0%) ########################## YDR077W (1017bp = 339AA) has 95 hits (SED1) putative cell surface glycoprotein Spar (test2) orthologous hit at 91% f506/506 (100.0%) over 506bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f754/782 (96.4%) over 792bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f692/718 (96.4%) over 732bp for offset 0 <== THIS IS REAL YDR077W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR077W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/583 (0.3%). Conflicting: 2/583 (0.3%). NoInfo: 2/583 (0.3%). Certain keep: 577/583 (99.0%) ########################## YDR078C (672bp = 224AA) has 12 hits (SHU2) Spar (test2) orthologous hit at 89% f669/671 (99.7%) over 672bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL YDR078C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR078C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/584 (0.3%). Conflicting: 2/584 (0.3%). NoInfo: 2/584 (0.3%). Certain keep: 578/584 (99.0%) ########################## YDR079W (336bp = 112AA) has 17 hits (PET100) cytochrome c oxidase-specific assembly factor Spar (test2) orthologous hit at 93% f331/333 (99.4%) over 336bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f330/333 (99.1%) over 336bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f333/333 (100.0%) over 336bp for offset 0 <== THIS IS REAL YDR079W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR079W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/585 (0.3%). Conflicting: 2/585 (0.3%). NoInfo: 2/585 (0.3%). Certain keep: 579/585 (99.0%) ########################## YDR080W (2979bp = 993AA) has 323 hits (VPS41) component of vacuolar membrane pro..in complex (92) Spar (test2) orthologous hit at 88% f2792/2850 (98.0%) over 2859bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1899/1958 (97.0%) over 1974bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2755/2819 (97.7%) over 2832bp for offset 2 <== THIS IS REAL YDR080W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR080W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/586 (0.3%). Conflicting: 2/586 (0.3%). NoInfo: 2/586 (0.3%). Certain keep: 580/586 (99.0%) ########################## YDR081C (2778bp = 926AA) has 320 hits (PDC2) Asparagine and serine-rich protein Spar (test2) orthologous hit at 90% f1683/1683 (100.0%) over 1683bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 75% f1293/1465 (88.3%) over 1491bp for offset 0 Smik (test3) Longest island has f97 at 81% over 1201bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1661/1746 (95.1%) over 1761bp for offset 0 <== THIS IS REAL 0 100200300400 500600700800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k |__|__|__|__|___|__|__|__|___|__|__|__|___|__|__|__|___|__|__|__|___|__|__|__|__|___|__|__| 97f 81% 1201bp Sm863brk |.........|======================================| YDR081C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR081C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/587 (0.3%). Conflicting: 2/587 (0.3%). NoInfo: 2/587 (0.3%). Certain keep: 581/587 (99.0%) ########################## YDR082W (1485bp = 495AA) has 11 hits (STN1) involved in telomere length regulation Spar (test2) orthologous hit at 84% f1478/1481 (99.8%) over 1485bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f748/771 (97.0%) over 776bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1433/1474 (97.2%) over 1485bp for offset 0 <== THIS IS REAL YDR082W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR082W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/588 (0.3%). Conflicting: 2/588 (0.3%). NoInfo: 2/588 (0.3%). Certain keep: 582/588 (99.0%) ########################## YDR083W (1209bp = 403AA) has 76 hits (RRP8) Spar (test2) orthologous hit at 90% f1169/1206 (96.9%) over 1209bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1162/1201 (96.8%) over 1207bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1073/1202 (89.3%) over 1209bp for offset 1 Sbay (test3) Longest island has f98 at 85% over 891bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 11k |______|______|_______|______|_______|______|_______|______|______|_______|______|_______|| 94f 76% 210bp 98f 85% 891bp Sb902full |...|xxxxxxxxxxxxxx>...|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>| YDR083W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR083W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/589 (0.3%). Conflicting: 2/589 (0.3%). NoInfo: 2/589 (0.3%). Certain keep: 583/589 (99.0%) ########################## YDR085C (1863bp = 621AA) has 19 hits (AFR1) cytoskeletal protein, similar to arrestins Spar (test2) orthologous hit at 85% f1854/1861 (99.6%) over 1863bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f694/744 (93.3%) over 750bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1134/1222 (92.8%) over 1236bp for offset 0 <== THIS IS REAL YDR085C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR085C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/590 (0.3%). Conflicting: 2/590 (0.3%). NoInfo: 2/590 (0.3%). Certain keep: 584/590 (99.0%) ########################## YDR086C (243bp = 81AA) has 15 hits (SSS1) endoplasmic reticulum protein that is ..ic complex (144) Spar (test2) orthologous hit at 95% f242/242 (100.0%) over 242bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f242/242 (100.0%) over 242bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f236/242 (97.5%) over 243bp for offset 0 <== THIS IS REAL YDR086C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR086C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/591 (0.3%). Conflicting: 2/591 (0.3%). NoInfo: 2/591 (0.3%). Certain keep: 585/591 (99.0%) ########################## YDR087C (837bp = 279AA) has 45 hits (RRP1) involved in rRNA processing Spar (test2) orthologous hit at 90% f834/837 (99.6%) over 837bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f757/759 (99.7%) over 759bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f595/627 (94.9%) over 631bp for offset 0 <== THIS IS REAL YDR087C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR087C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/592 (0.3%). Conflicting: 2/592 (0.3%). NoInfo: 2/592 (0.3%). Certain keep: 586/592 (99.0%) ########################## YDR088C (1149bp = 383AA) has 23 hits (SLU7) involved in mRNA splicing Spar (test2) orthologous hit at 88% f1138/1146 (99.3%) over 1149bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1127/1146 (98.3%) over 1149bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1106/1142 (96.8%) over 1148bp for offset 0 <== THIS IS REAL YDR088C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR088C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/593 (0.3%). Conflicting: 2/593 (0.3%). NoInfo: 2/593 (0.3%). Certain keep: 587/593 (99.0%) ########################## YDR091C (1827bp = 609AA) has 13 hits (RLI1) putative member of nontransporter gr..uperfamily (125) Spar (test2) orthologous hit at 93% f958/958 (100.0%) over 958bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 91% f1827/1827 (100.0%) over 1827bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f1827/1827 (100.0%) over 1827bp for offset 0 <== THIS IS REAL YDR091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/594 (0.3%). Conflicting: 2/594 (0.3%). NoInfo: 2/594 (0.3%). Certain keep: 588/594 (99.0%) ########################## YDR093W (4839bp = 1613AA) has 73 hits (DNF2) Hypothetical ORF . YDR093W skipped ########################## YDR096W (2685bp = 895AA) has 69 hits (GIS1) putative zinc finger protein; repres..nscription (105) Spar (test2) orthologous hit at 87% f2319/2326 (99.7%) over 2334bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f2662/2676 (99.5%) over 2685bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1074/1202 (89.4%) over 1224bp for offset 0 Sbay (test3) Longest island has f99 at 83% over 867bp <== THIS IS REAL 0 100200 300400500 600700800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k |__|__|___|__|__|___|__|__|___|__|__|___|__|__|___|__|__|___|__|___|__|__|___|__|__|___|__| 99f 83% 867bp Sb947brk |............|============================| YDR096W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR096W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/595 (0.3%). Conflicting: 2/595 (0.3%). NoInfo: 2/595 (0.3%). Certain keep: 589/595 (99.0%) ########################## YDR097C (3729bp = 1243AA) has 71 hits (MSH6) Homolog of the human GTBP protein, ..n mispairs (228) Spar (test2) orthologous hit at 88% f1957/1982 (98.7%) over 1987bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 85% f721/721 (100.0%) over 721bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3184/3213 (99.1%) over 3219bp for offset 0 <== THIS IS REAL YDR097C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR097C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/596 (0.3%). Conflicting: 2/596 (0.3%). NoInfo: 2/596 (0.3%). Certain keep: 590/596 (99.0%) ########################## YDR098C (858bp = 286AA) has 82 hits (GRX3) Protein with glutaredoxin activity Spar (test2) non-orthologous hit at 87% f766/855 (89.6%) over 857bp for offset 0 Spar (test3) Longest island has f100 at 89% over 763bp <== THIS IS REAL Smik (test2) non-orthologous hit at 65% f365/425 (85.9%) over 438bp for offset 0 Smik (test3) Longest island has f92 at 67% over 324bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f776/828 (93.7%) over 830bp for offset 2 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 858 |_________|_________|__________|_________|__________|_________|__________|_________|______| 100f 89% 763bp Sp123full |.........|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| 92f 67% 324bp 76f 65% 34bp Sm2full ||================================>.|===>.....> | YDR098C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR098C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/597 (0.3%). Conflicting: 2/597 (0.3%). NoInfo: 2/597 (0.3%). Certain keep: 591/597 (99.0%) ########################## YDR099W (822bp = 274AA) has 782 hits (BMH2) member of conserved eukaryotic 14-3-..ene family (93) Spar (test2) orthologous hit at 92% f821/822 (99.9%) over 822bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f783/801 (97.8%) over 808bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f788/800 (98.5%) over 804bp for offset 2 <== THIS IS REAL YDR099W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR099W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/598 (0.3%). Conflicting: 2/598 (0.3%). NoInfo: 2/598 (0.3%). Certain keep: 592/598 (99.0%) ########################## YDR101C (1782bp = 594AA) has 7 hits (ARX1) Spar (test2) orthologous hit at 91% f1781/1781 (100.0%) over 1781bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1781/1781 (100.0%) over 1781bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1754/1780 (98.5%) over 1781bp for offset 0 <== THIS IS REAL YDR101C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR101C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/599 (0.3%). Conflicting: 2/599 (0.3%). NoInfo: 2/599 (0.3%). Certain keep: 593/599 (99.0%) ########################## YDR103W (2754bp = 918AA) has 35 hits (STE5) scaffold protein for MAP kinase cascade Spar (test2) orthologous hit at 86% f2747/2748 (100.0%) over 2754bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f2158/2178 (99.1%) over 2187bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 76% f1899/1932 (98.3%) over 1939bp for offset 0 <== THIS IS REAL YDR103W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR103W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/600 (0.3%). Conflicting: 2/600 (0.3%). NoInfo: 2/600 (0.3%). Certain keep: 594/600 (99.0%) ########################## YDR104C (3738bp = 1246AA) has 14 hits (SPO71) Product of gene unknown Spar (test2) orthologous hit at 87% f3725/3735 (99.7%) over 3738bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2927/2956 (99.0%) over 2960bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1014/1019 (99.5%) over 1023bp for offset 0 <== THIS IS REAL YDR104C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR104C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/601 (0.3%). Conflicting: 2/601 (0.3%). NoInfo: 2/601 (0.3%). Certain keep: 595/601 (99.0%) ########################## YDR106W (855bp = 285AA) has 11 hits (ARP10) Actin-related protein Spar (test2) orthologous hit at 85% f847/854 (99.2%) over 855bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 75% f819/850 (96.4%) over 855bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 70% f772/844 (91.5%) over 852bp for offset 2 <== THIS IS REAL YDR106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/602 (0.3%). Conflicting: 2/602 (0.3%). NoInfo: 2/602 (0.3%). Certain keep: 596/602 (99.0%) ########################## YDR108W (2097bp = 699AA) has 20 hits (GSG1) involved in meiosis Spar (test2) orthologous hit at 89% f2093/2096 (99.9%) over 2097bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1274/2095 (60.8%) over 2097bp for offset 0 Smik (test3) Longest island has f99 at 84% over 1288bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1879/1953 (96.2%) over 1965bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k |___|___|___|____|___|___|____|___|___|___|____|___|___|____|___|___|___|____|___|___|____| 100f 86% 802bp 99f 84% 1288bp Sm1086ful |=================================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YDR108W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR108W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/603 (0.3%). Conflicting: 2/603 (0.3%). NoInfo: 2/603 (0.3%). Certain keep: 597/603 (99.0%) ########################## YDR110W (1701bp = 567AA) has 19 hits (FOB1) DNA replication fork blocking protein Spar (test2) orthologous hit at 85% f1409/1457 (96.7%) over 1462bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1512/1599 (94.6%) over 1609bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f878/1505 (58.3%) over 1511bp for offset 0 Sbay (test3) Longest island has f99 at 82% over 865bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 11k |____|____|____|_____|____|____|_____|____|____|____|_____|____|____|_____|____|____|____|| 99f 84% 605bp 99f 82% 865bp Sb217full |===============================|ooooooooooooooooooooooooooooooooooooooooooooo>.> | YDR110W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR110W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/604 (0.3%). Conflicting: 2/604 (0.3%). NoInfo: 2/604 (0.3%). Certain keep: 598/604 (99.0%) ########################## YDR113C (1122bp = 374AA) has 12 hits (PDS1) 42-kDa nuclear protein Spar (test2) orthologous hit at 85% f1103/1117 (98.7%) over 1119bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f571/576 (99.1%) over 576bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f990/1108 (89.4%) over 1119bp for offset 0 Sbay (test3) Longest island has f98 at 77% over 770bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k1k |_______|_______|_______|_______|_______|_______|_______|_______|_______|_______|_______|_| 98f 77% 770bp 83f 64% 251bp Sb217full |=============================================================>........|==================|> YDR113C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR113C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/605 (0.3%). Conflicting: 2/605 (0.3%). NoInfo: 2/605 (0.3%). Certain keep: 599/605 (99.0%) ########################## YDR118W (1959bp = 653AA) has 22 hits (APC4) subunit of the anaphase promoting co..plex (APC) (91) Spar (test2) orthologous hit at 87% f1947/1957 (99.5%) over 1959bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1633/1697 (96.2%) over 1703bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1911/1940 (98.5%) over 1945bp for offset 0 <== THIS IS REAL YDR118W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR118W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/606 (0.3%). Conflicting: 2/606 (0.3%). NoInfo: 2/606 (0.3%). Certain keep: 600/606 (99.0%) ########################## YDR120C (1713bp = 571AA) has 8 hits (TRM1) N2,N2-dimethylguanosine-specific tRNA..ransferase (98) Spar (test2) orthologous hit at 90% f1713/1713 (100.0%) over 1713bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1708/1712 (99.8%) over 1713bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1655/1698 (97.5%) over 1701bp for offset 0 <== THIS IS REAL YDR120C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR120C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/607 (0.3%). Conflicting: 2/607 (0.3%). NoInfo: 2/607 (0.3%). Certain keep: 601/607 (99.0%) ########################## YDR121W (591bp = 197AA) has 23 hits (DPB4) DNA polymerase II (epsilon) 4th subunit Spar (test2) orthologous hit at 87% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f589/589 (100.0%) over 589bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f400/400 (100.0%) over 400bp for offset 0 <== THIS IS REAL YDR121W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR121W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/608 (0.3%). Conflicting: 2/608 (0.3%). NoInfo: 2/608 (0.3%). Certain keep: 602/608 (99.0%) ########################## YDR122W (3195bp = 1065AA) has 73 hits (KIN1) Serine/threonine protein kinase Spar (test2) orthologous hit at 89% f3190/3192 (99.9%) over 3195bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1266/1267 (99.9%) over 1273bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f353/381 (92.7%) over 383bp for offset 0 <== THIS IS REAL YDR122W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR122W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/609 (0.3%). Conflicting: 2/609 (0.3%). NoInfo: 2/609 (0.3%). Certain keep: 603/609 (99.0%) ########################## YDR123C (915bp = 305AA) has 4 hits (INO2) helix-loop-helix protein Spar (test2) orthologous hit at 88% f915/915 (100.0%) over 915bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f173/173 (100.0%) over 173bp for offset 0 Smik (test3) Longest island has f100 at 86% over 173bp Sbay (test2) non-orthologous hit at 76% f889/911 (97.6%) over 915bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 90915 |________|_________|_________|_________|_________|_________|________|_________|_________|_| 100f 86% 173bp Sm1080brk |================> | YDR123C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR123C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/610 (0.3%). Conflicting: 2/610 (0.3%). NoInfo: 2/610 (0.3%). Certain keep: 604/610 (99.0%) ########################## YDR125C (1362bp = 454AA) has 6 hits (ECM18) (putative) involved in cell wall biogenesis Spar (test2) orthologous hit at 87% f1352/1358 (99.6%) over 1359bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1329/1357 (97.9%) over 1359bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f1288/1330 (96.8%) over 1338bp for offset 0 <== THIS IS REAL YDR125C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR125C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/611 (0.3%). Conflicting: 2/611 (0.3%). NoInfo: 2/611 (0.3%). Certain keep: 605/611 (99.0%) ########################## YDR126W (1011bp = 337AA) has 7 hits (PSL10) Hypothetical ORF Spar (test2) orthologous hit at 88% f1004/1010 (99.4%) over 1011bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f986/1002 (98.4%) over 1011bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f996/1006 (99.0%) over 1011bp for offset 0 <== THIS IS REAL YDR126W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR126W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/612 (0.3%). Conflicting: 2/612 (0.3%). NoInfo: 2/612 (0.3%). Certain keep: 606/612 (99.0%) ########################## YDR127W (4767bp = 1589AA) has 8 hits (ARO1) pentafunctional arom polypeptide (co.. synthase) (227) Spar (test2) orthologous hit at 91% f4764/4766 (100.0%) over 4767bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f4373/4373 (100.0%) over 4373bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f4759/4764 (99.9%) over 4766bp for offset 0 <== THIS IS REAL YDR127W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR127W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/613 (0.3%). Conflicting: 2/613 (0.3%). NoInfo: 2/613 (0.3%). Certain keep: 607/613 (99.0%) ########################## YDR130C (876bp = 292AA) has 9 hits (FIN1) Cell cycle-dependent filament between nuclei Spar (test2) orthologous hit at 74% f632/841 (75.1%) over 862bp for offset 2 Spar (test3) Longest island has f98 at 87% over 556bp <== THIS IS REAL Smik (test2) non-orthologous hit at 68% f433/596 (72.7%) over 606bp for offset 2 Smik (test3) Longest island has f98 at 75% over 421bp <== THIS IS REAL Sbay (test2) orthologous hit at 75% f854/871 (98.0%) over 876bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 876 |_________|_________|_________|__________|_________|_________|_________|__________|_______| 98f 87% 556bp Sp122full |========================================================>..............................> | 98f 75% 421bp Sm1077brk |....................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YDR130C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR130C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/614 (0.3%). Conflicting: 2/614 (0.3%). NoInfo: 2/614 (0.3%). Certain keep: 608/614 (99.0%) ########################## YDR135C (4548bp = 1516AA) has 49 hits (YCF1) metal resistance protein, similar t..otein CFTR (144) Spar (test2) orthologous hit at 90% f2187/2187 (100.0%) over 2187bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1930/1985 (97.2%) over 1988bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f668/668 (100.0%) over 668bp for offset 0 <== THIS IS REAL YDR135C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR135C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/615 (0.3%). Conflicting: 2/615 (0.3%). NoInfo: 2/615 (0.3%). Certain keep: 609/615 (99.0%) ########################## YDR136C (573bp = 191AA) has 11 hits (VPS61) Hypothetical ORF Flanking ORFs are: YDR134C and YDR136C. YDR136C skipped ########################## YDR137W (1992bp = 664AA) has 13 hits (RGP1) involved in mitotic growth Flanking ORFs are: YDR134C and YDR136C. YDR137W skipped ########################## YDR138W (2259bp = 753AA) has 15 hits (HPR1) involved in mitosis, recombination; .. 2 regions (112) Spar (test2) orthologous hit at 85% f2249/2256 (99.7%) over 2259bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f2201/2252 (97.7%) over 2259bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2113/2208 (95.7%) over 2224bp for offset 2 <== THIS IS REAL YDR138W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR138W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/616 (0.3%). Conflicting: 2/616 (0.3%). NoInfo: 2/616 (0.3%). Certain keep: 610/616 (99.0%) ########################## YDR140W (666bp = 222AA) has 4 hits (FYV9) Hypothetical ORF Spar (test2) orthologous hit at 89% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f646/664 (97.3%) over 666bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f657/664 (98.9%) over 666bp for offset 0 <== THIS IS REAL YDR140W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR140W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/617 (0.3%). Conflicting: 2/617 (0.3%). NoInfo: 2/617 (0.3%). Certain keep: 611/617 (99.0%) ########################## YDR141C (5097bp = 1699AA) has 22 hits (DOP1) homolog of Emericella nidulans deve..ey (dopA). (120) Spar (test2) orthologous hit at 89% f4586/4586 (100.0%) over 4586bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f149/219 (68.0%) over 220bp for offset 2 Smik (test3) Longest island has f100 at 90% over 115bp Sbay (test2) orthologous hit at 80% f672/1184 (56.8%) over 1185bp for offset 0 Sbay (test3) Longest island has f99 at 79% over 661bp <== THIS IS REAL 010203045060708901k1k11k1k1k1k11k1k2k22k2k2k22k2k2k23k3k3k3k33k3k3k33k4k4k44k4k4k44k4k4k5k5k ||_|_|_||_|_|_||_|_|_||_|_|_|_||_|_|_||_|_|_||_|_|_||_|_|_|_||_|_|_||_|_|_||_|_|_||_|_|_|_| 1110Sm1072brk |||x| 99f 79% 661b100f 83% Sb210brk |==========>|oooooooo| YDR141C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR141C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/618 (0.3%). Conflicting: 2/618 (0.3%). NoInfo: 2/618 (0.3%). Certain keep: 612/618 (99.0%) ########################## YDR142C (1128bp = 376AA) has 5 hits (PEX7) Member of beta-transducin-related (WD..ein family (99) Spar (test2) orthologous hit at 90% f1126/1126 (100.0%) over 1126bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1122/1125 (99.7%) over 1126bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f859/1124 (76.4%) over 1126bp for offset 1 Sbay (test3) Longest island has f99 at 80% over 545bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|_______|_______|_______|_______|_______|__| 100f 82% 239bp 99f 80% 545bp 100f 83% 320bp Sb208full |==================|oooooooooooooooooooooooooooooooooooooooooo>.|ooooooooooooooooooooooooo| YDR142C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR142C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/619 (0.3%). Conflicting: 2/619 (0.3%). NoInfo: 2/619 (0.3%). Certain keep: 613/619 (99.0%) ########################## YDR143C (1833bp = 611AA) has 16 hits (SAN1) (putative) transcriptional regulator Spar (test2) orthologous hit at 86% f1118/1126 (99.3%) over 1134bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f924/966 (95.7%) over 971bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f982/1099 (89.4%) over 1115bp for offset 2 Sbay (test3) Longest island has f97 at 72% over 748bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k1k |___|____|____|____|____|____|____|____|____|____|____|___|____|____|____|____|____|____|_| 89f 72% 265bp 97f 72% 748bp Sb208full ||xxxxxxxxxxxx>....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | YDR143C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR143C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/620 (0.3%). Conflicting: 2/620 (0.3%). NoInfo: 2/620 (0.3%). Certain keep: 614/620 (99.0%) ########################## YDR144C (1791bp = 597AA) has 36 hits (MKC7) aspartyl protease related to Yap3p Spar (test2) orthologous hit at 87% f1791/1791 (100.0%) over 1791bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1769/1786 (99.0%) over 1790bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1201/1244 (96.5%) over 1256bp for offset 1 <== THIS IS REAL YDR144C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR144C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/621 (0.3%). Conflicting: 2/621 (0.3%). NoInfo: 2/621 (0.3%). Certain keep: 615/621 (99.0%) ########################## YDR145W (1620bp = 540AA) has 1105 hits (TAF12) TFIID subunit Spar (test2) orthologous hit at 83% f925/998 (92.7%) over 1010bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f1029/1321 (77.9%) over 1352bp for offset 0 Smik (test3) Longest island has f97 at 81% over 877bp <== THIS IS REAL Sbay (test2) orthologous hit at 69% f665/1239 (53.7%) over 1264bp for offset 0 Sbay (test3) Longest island has f100 at 83% over 544bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k1k |____|_____|____|_____|____|_____|____|_____|_____|____|_____|____|_____|____|_____|____|_| 97f 81% 877bp Sm1070brk |............................|==============================================|=> 100f 83% 544bp Sb208full |.........................................|oooooooooooooooooooooooooooo|> YDR145W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR145W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/622 (0.3%). Conflicting: 2/622 (0.3%). NoInfo: 2/622 (0.3%). Certain keep: 616/622 (99.0%) ########################## YDR146C (2130bp = 710AA) has 28 hits (SWI5) transcriptional activator Spar (test2) orthologous hit at 87% f2130/2130 (100.0%) over 2130bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1982/2021 (98.1%) over 2029bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f936/1239 (75.5%) over 1273bp for offset 0 Sbay (test3) Longest island has f95 at 77% over 841bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k2k |___|___|___|___|____|___|___|___|____|___|___|___|___|____|___|___|___|____|___|___|___|_| 95f 77% 841bp Sb1003brk |..................|===================================> | YDR146C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR146C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/623 (0.3%). Conflicting: 2/623 (0.3%). NoInfo: 2/623 (0.3%). Certain keep: 617/623 (99.0%) ########################## YDR147W (1605bp = 535AA) has 15 hits (EKI1) Ethanolamine Kinase Spar (test2) orthologous hit at 86% f1588/1600 (99.3%) over 1605bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f645/687 (93.9%) over 691bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1408/1501 (93.8%) over 1516bp for offset 2 <== THIS IS REAL YDR147W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR147W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/624 (0.3%). Conflicting: 2/624 (0.3%). NoInfo: 2/624 (0.3%). Certain keep: 618/624 (99.0%) ########################## YDR148C (1392bp = 464AA) has 10 hits (KGD2) dihydrolipoyl transsuccinylase compo..tochondria (145) Spar (test2) orthologous hit at 86% f904/921 (98.2%) over 923bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f874/889 (98.3%) over 893bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f831/837 (99.3%) over 840bp for offset 0 <== THIS IS REAL YDR148C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR148C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/625 (0.3%). Conflicting: 2/625 (0.3%). NoInfo: 2/625 (0.3%). Certain keep: 619/625 (99.0%) ########################## YDR150W (8247bp = 2749AA) has 158 hits (NUM1) Protein with variable number of ta..ogy domain (184) Flanking ORFs are: YDR147W and YDR149C. YDR150W skipped ########################## YDR151C (978bp = 326AA) has 10 hits (CTH1) member of the CCCH zinc finger protei..acid (aa)] (244) Spar (test2) orthologous hit at 86% f974/977 (99.7%) over 978bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f960/973 (98.7%) over 977bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 72% f749/871 (86.0%) over 880bp for offset 1 Sbay (test3) Longest island has f99 at 76% over 712bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 978 |________|________|________|________|_________|________|________|________|________|_______| 99f 76% 712bp Sb472full |.....|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo>.........>| YDR151C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR151C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/626 (0.3%). Conflicting: 2/626 (0.3%). NoInfo: 2/626 (0.3%). Certain keep: 620/626 (99.0%) ########################## YDR155C (489bp = 163AA) has 24 hits (CPR1) cyclophilin peptidyl-prolyl cis-trans isomerase Flanking ORFs are: YDR150W and YDR152W. YDR155C skipped ########################## YDR156W (414bp = 138AA) has 3 hits (RPA14) RNA polymerase I subunit A14 Flanking ORFs are: YDR150W and YDR152W. YDR156W skipped ########################## YDR158W (1098bp = 366AA) has 7 hits (HOM2) aspartic beta semi-aldehyde dehydrogenase Spar (test2) non-orthologous hit at 91% f1098/1098 (100.0%) over 1098bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1098/1098 (100.0%) over 1098bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 85% f1098/1098 (100.0%) over 1098bp for offset 0 <== THIS IS REAL YDR158W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR158W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/627 (0.3%). Conflicting: 2/627 (0.3%). NoInfo: 2/627 (0.3%). Certain keep: 621/627 (99.0%) ########################## YDR159W (3906bp = 1302AA) has 69 hits (SAC3) Leucine permease transcriptional regulator Spar (test2) orthologous hit at 81% f2162/2380 (90.8%) over 2403bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f3726/3886 (95.9%) over 3905bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1963/2218 (88.5%) over 2248bp for offset 2 Sbay (test3) Longest island has f99 at 78% over 1569bp <== THIS IS REAL 0 1020300405060070809001k1k1k1k 1k1k1k 1k1k1k 2k2k2k2k 2k2k2k 2k2k2k 3k3k3k 3k3k3k3k 3k3k33k |_|_|_|__|_|_|__|_|_|__|_|_|_|__|_|_|__|_|_|__|_|_|_|__|_|_|__|_|_|__|_|_|__|_|_|_|__|_|_|| 99f 78% 1569bp 88f 58% 365bp Sb473brk |===================================>.|=======>.....> | YDR159W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR159W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/628 (0.3%). Conflicting: 2/628 (0.3%). NoInfo: 2/628 (0.3%). Certain keep: 622/628 (99.0%) ########################## YDR160W (2559bp = 853AA) has 19 hits (SSY1) regulator of transporters Spar (test2) orthologous hit at 89% f1594/2556 (62.4%) over 2559bp for offset 0 Spar (test3) Longest island has f99 at 89% over 1604bp <== THIS IS REAL Smik (test2) orthologous hit at 84% f2553/2557 (99.8%) over 2558bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f813/817 (99.5%) over 818bp for offset 0 <== THIS IS REAL 0 100 200300 400500 600700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k |__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|__| 99f 89% 1604bp 100f 92% 953bp Sp118full |=======================================================|ooooooooooooooooooooooooooooooooo| YDR160W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR160W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/629 (0.3%). Conflicting: 2/629 (0.3%). NoInfo: 2/629 (0.3%). Certain keep: 623/629 (99.0%) ########################## YDR161W (1164bp = 388AA) has 5 hits (TCI1) interacts with PP2C Spar (test2) orthologous hit at 89% f1160/1160 (100.0%) over 1163bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1164/1164 (100.0%) over 1164bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f1159/1162 (99.7%) over 1163bp for offset 0 <== THIS IS REAL YDR161W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR161W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/630 (0.3%). Conflicting: 2/630 (0.3%). NoInfo: 2/630 (0.3%). Certain keep: 624/630 (99.0%) ########################## YDR162C (711bp = 237AA) has 16 hits (NBP2) interacts with Nap1, which is involve..e assembly (101) Spar (test2) orthologous hit at 87% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f692/707 (97.9%) over 711bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f325/335 (97.0%) over 336bp for offset 0 <== THIS IS REAL YDR162C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR162C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/631 (0.3%). Conflicting: 2/631 (0.3%). NoInfo: 2/631 (0.3%). Certain keep: 625/631 (99.0%) ########################## YDR163W (528bp = 176AA) has 9 hits (CWC15) Hypothetical ORF Spar (test2) orthologous hit at 83% f509/520 (97.9%) over 528bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f507/524 (96.8%) over 527bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f325/347 (93.7%) over 357bp for offset 0 <== THIS IS REAL YDR163W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR163W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/632 (0.3%). Conflicting: 2/632 (0.3%). NoInfo: 2/632 (0.3%). Certain keep: 626/632 (99.1%) ########################## YDR164C (2175bp = 725AA) has 14 hits (SEC1) (putative) SNARE docking complex subunit Spar (test2) orthologous hit at 90% f2175/2175 (100.0%) over 2175bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2157/2172 (99.3%) over 2175bp for offset 0 <== THIS IS REAL YDR164C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR164C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/633 (0.3%). Conflicting: 2/633 (0.3%). NoInfo: 2/633 (0.3%). Certain keep: 627/633 (99.1%) ########################## YDR165W (1335bp = 445AA) has 14 hits (TRM82) tRNA methyltransferase Spar (test2) orthologous hit at 87% f1326/1334 (99.4%) over 1335bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1168/1237 (94.4%) over 1247bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f778/855 (91.0%) over 858bp for offset 2 <== THIS IS REAL YDR165W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR165W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/634 (0.3%). Conflicting: 2/634 (0.3%). NoInfo: 2/634 (0.3%). Certain keep: 628/634 (99.1%) ########################## YDR166C (2916bp = 972AA) has 48 hits (SEC5) 107 kDa component of the Exocyst com..xocytosis. (110) Spar (test2) orthologous hit at 90% f2916/2916 (100.0%) over 2916bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2807/2912 (96.4%) over 2915bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1765/1847 (95.6%) over 1853bp for offset 0 <== THIS IS REAL YDR166C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR166C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/635 (0.3%). Conflicting: 2/635 (0.3%). NoInfo: 2/635 (0.3%). Certain keep: 629/635 (99.1%) ########################## YDR167W (621bp = 207AA) has 53 hits (TAF10) TFIID subunit Spar (test2) orthologous hit at 91% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f620/620 (100.0%) over 620bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f614/620 (99.0%) over 621bp for offset 0 <== THIS IS REAL YDR167W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR167W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/636 (0.3%). Conflicting: 2/636 (0.3%). NoInfo: 2/636 (0.3%). Certain keep: 630/636 (99.1%) ########################## YDR168W (1521bp = 507AA) has 30 hits (CDC37) (putative) chaperone, involved in s..ough START (134) Spar (test2) orthologous hit at 90% f1520/1520 (100.0%) over 1520bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1521/1521 (100.0%) over 1521bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1493/1516 (98.5%) over 1521bp for offset 0 <== THIS IS REAL YDR168W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR168W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/637 (0.3%). Conflicting: 2/637 (0.3%). NoInfo: 2/637 (0.3%). Certain keep: 631/637 (99.1%) ########################## YDR169C (1542bp = 514AA) has 12 hits (STB3) Sin3 binding protein Spar (test2) orthologous hit at 89% f1538/1541 (99.8%) over 1542bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f52/58 (89.7%) over 59bp for offset 0 Smik (test3) Longest island has f100 at 88% over 52bp Sbay (test2) orthologous hit at 80% f1445/1464 (98.7%) over 1466bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k |____|_____|_____|_____|_____|_____|____|_____|_____|_____|_____|_____|____|_____|_____|__| 100Sm761brkb ||xx| YDR169C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR169C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/638 (0.3%). Conflicting: 2/638 (0.3%). NoInfo: 2/638 (0.3%). Certain keep: 632/638 (99.1%) ########################## YDR170C (6030bp = 2010AA) has 657 hits (SEC7) Guanine nucleotide exchange protein for ARF Spar (test2) orthologous hit at 88% f5755/5920 (97.2%) over 5947bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2117/2121 (99.8%) over 2122bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1287/1287 (100.0%) over 1287bp for offset 0 <== THIS IS REAL YDR170C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR170C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/639 (0.3%). Conflicting: 2/639 (0.3%). NoInfo: 2/639 (0.3%). Certain keep: 633/639 (99.1%) ########################## YDR171W (1128bp = 376AA) has 22 hits (HSP42) heat shock protein similar to HSP26..n assembly (115) Spar (test2) orthologous hit at 86% f1104/1122 (98.4%) over 1128bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f576/616 (93.5%) over 618bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f617/659 (93.6%) over 662bp for offset 0 <== THIS IS REAL YDR171W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR171W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/640 (0.3%). Conflicting: 2/640 (0.3%). NoInfo: 2/640 (0.3%). Certain keep: 634/640 (99.1%) ########################## YDR172W (2058bp = 686AA) has 35 hits (SUP35) translation termination factor eRF3 Spar (test2) orthologous hit at 92% f2058/2058 (100.0%) over 2058bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f275/275 (100.0%) over 275bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 74% f1460/1769 (82.5%) over 1804bp for offset 0 Sbay (test3) Longest island has f100 at 86% over 1149bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k |___|___|____|___|___|____|___|___|____|___|____|___|___|____|___|___|____|___|____|___|__| 100f 86% 1149bp Sb478brk |.............................|==================================================> | YDR172W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR172W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/641 (0.3%). Conflicting: 2/641 (0.3%). NoInfo: 2/641 (0.3%). Certain keep: 635/641 (99.1%) ########################## YDR173C (1068bp = 356AA) has 233 hits (ARG82) dual-specificity inositol 1,4,5-tr.. 3-kinase) (166) Spar (test2) orthologous hit at 87% f1062/1062 (100.0%) over 1068bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f885/885 (100.0%) over 885bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 66% f101/119 (84.9%) over 120bp for offset 0 Sbay (test3) Longest island has f86 at 71% over 93bp 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|________|_______|________|_______|_______|________|_______|________|_____| 81186f 71% 93bp Sb478full |=||=======> | YDR173C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDR173C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/642 (0.3%). Conflicting: 2/642 (0.3%). NoInfo: 2/642 (0.3%). Certain keep: 636/642 (99.1%) ########################## YDR174W (741bp = 247AA) has 92 hits (HMO1) 35 kDa protein belonging to the high ..f proteins (119) Spar (test2) orthologous hit at 94% f741/741 (100.0%) over 741bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f741/741 (100.0%) over 741bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f622/622 (100.0%) over 622bp for offset 0 <== THIS IS REAL YDR174W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR174W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/643 (0.3%). Conflicting: 2/643 (0.3%). NoInfo: 2/643 (0.3%). Certain keep: 637/643 (99.1%) ########################## YDR175C (960bp = 320AA) has 8 hits (RSM24) mitochondrial ribosome small subunit component Spar (test2) orthologous hit at 90% f835/839 (99.5%) over 840bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f835/839 (99.5%) over 840bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f843/856 (98.5%) over 857bp for offset 0 <== THIS IS REAL YDR175C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR175C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/644 (0.3%). Conflicting: 2/644 (0.3%). NoInfo: 2/644 (0.3%). Certain keep: 638/644 (99.1%) ########################## YDR176W (2109bp = 703AA) has 23 hits (NGG1) transcription factor; genetic and mu..GA complex (252) Spar (test2) orthologous hit at 90% f2099/2105 (99.7%) over 2109bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2091/2106 (99.3%) over 2109bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2007/2100 (95.6%) over 2109bp for offset 0 <== THIS IS REAL YDR176W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR176W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/645 (0.3%). Conflicting: 2/645 (0.3%). NoInfo: 2/645 (0.3%). Certain keep: 639/645 (99.1%) ########################## YDR177W (648bp = 216AA) has 16 hits (UBC1) ubiquitin-conjugating enzyme Spar (test2) orthologous hit at 92% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL YDR177W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR177W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/646 (0.3%). Conflicting: 2/646 (0.3%). NoInfo: 2/646 (0.3%). Certain keep: 640/646 (99.1%) ########################## YDR178W (546bp = 182AA) has 7 hits (SDH4) succinate dehydrogenase membrane anchor subunit Spar (test2) orthologous hit at 90% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f526/544 (96.7%) over 546bp for offset 0 <== THIS IS REAL YDR178W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR178W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/647 (0.3%). Conflicting: 2/647 (0.3%). NoInfo: 2/647 (0.3%). Certain keep: 641/647 (99.1%) ########################## YDR180W (4482bp = 1494AA) has 38 hits (SCC2) Sister chromatid cohesion protein Spar (test2) orthologous hit at 87% f4482/4482 (100.0%) over 4482bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1415/1426 (99.2%) over 1429bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f4385/4422 (99.2%) over 4433bp for offset 0 <== THIS IS REAL YDR180W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR180W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/648 (0.3%). Conflicting: 2/648 (0.3%). NoInfo: 2/648 (0.3%). Certain keep: 642/648 (99.1%) ########################## YDR181C (1446bp = 482AA) has 18 hits (SAS4) involved in silencing at telomeres, ..L, and HMR (92) Spar (test2) orthologous hit at 86% f1243/1258 (98.8%) over 1259bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 77% f1214/1234 (98.4%) over 1240bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1114/1185 (94.0%) over 1196bp for offset 0 <== THIS IS REAL YDR181C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR181C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/649 (0.3%). Conflicting: 2/649 (0.3%). NoInfo: 2/649 (0.3%). Certain keep: 643/649 (99.1%) ########################## YDR182W (1476bp = 492AA) has 7 hits (CDC1) involved in ion homeostasis Spar (test2) orthologous hit at 88% f1475/1476 (99.9%) over 1476bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1103/1108 (99.5%) over 1109bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1464/1474 (99.3%) over 1475bp for offset 0 <== THIS IS REAL YDR182W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR182W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/650 (0.3%). Conflicting: 2/650 (0.3%). NoInfo: 2/650 (0.3%). Certain keep: 644/650 (99.1%) ########################## YDR183W (693bp = 231AA) has 11 hits (PLP1) Phosducin-Like Protein Spar (test2) orthologous hit at 87% f693/693 (100.0%) over 693bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f683/690 (99.0%) over 693bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f678/684 (99.1%) over 692bp for offset 0 <== THIS IS REAL YDR183W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR183W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/651 (0.3%). Conflicting: 2/651 (0.3%). NoInfo: 2/651 (0.3%). Certain keep: 645/651 (99.1%) ########################## YDR184C (885bp = 295AA) has 10 hits (ATC1) nuclear protein that interacts with Aip3 Spar (test2) orthologous hit at 90% f880/884 (99.5%) over 885bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f870/878 (99.1%) over 879bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f882/885 (99.7%) over 885bp for offset 0 <== THIS IS REAL YDR184C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR184C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/652 (0.3%). Conflicting: 2/652 (0.3%). NoInfo: 2/652 (0.3%). Certain keep: 646/652 (99.1%) ########################## YDR188W (1641bp = 547AA) has 13 hits (CCT6) component of cytoplasmic chaperonin complex Flanking ORFs are: YDR183W and YDR185C. YDR188W skipped ########################## YDR189W (2001bp = 667AA) has 14 hits (SLY1) SNARE docking complex subunit Spar (test2) orthologous hit at 90% f2001/2001 (100.0%) over 2001bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1992/1997 (99.7%) over 2001bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1994/1995 (99.9%) over 2001bp for offset 0 <== THIS IS REAL YDR189W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR189W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/653 (0.3%). Conflicting: 2/653 (0.3%). NoInfo: 2/653 (0.3%). Certain keep: 647/653 (99.1%) ########################## YDR190C (1392bp = 464AA) has 12 hits (RVB1) RUVB-like protein Spar (test2) orthologous hit at 92% f1392/1392 (100.0%) over 1392bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1389/1391 (99.9%) over 1392bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1392/1392 (100.0%) over 1392bp for offset 0 <== THIS IS REAL YDR190C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR190C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/654 (0.3%). Conflicting: 2/654 (0.3%). NoInfo: 2/654 (0.3%). Certain keep: 648/654 (99.1%) ########################## YDR191W (1113bp = 371AA) has 7 hits (HST4) similar to nuclear lamins, involved i.. silencing (101) Spar (test2) orthologous hit at 90% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f770/770 (100.0%) over 770bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1102/1110 (99.3%) over 1112bp for offset 0 <== THIS IS REAL YDR191W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR191W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/655 (0.3%). Conflicting: 2/655 (0.3%). NoInfo: 2/655 (0.3%). Certain keep: 649/655 (99.1%) ########################## YDR192C (1293bp = 431AA) has 10 hits (NUP42) 42-kD protein associated with nucle..e proteins (175) Flanking ORFs are: YDR190C and YDR192C. YDR192C skipped ########################## YDR194C (1995bp = 665AA) has 72 hits (MSS116) Mitochondrial DEAD box RNA helicase Spar (test2) orthologous hit at 89% f1992/1994 (99.9%) over 1995bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1398/1476 (94.7%) over 1482bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1980/1989 (99.5%) over 1995bp for offset 0 <== THIS IS REAL YDR194C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR194C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/656 (0.3%). Conflicting: 2/656 (0.3%). NoInfo: 2/656 (0.3%). Certain keep: 650/656 (99.1%) ########################## YDR195W (1602bp = 534AA) has 17 hits (REF2) RNA-binding protein, involved in mRN..processing (92) Spar (test2) orthologous hit at 90% f1576/1593 (98.9%) over 1602bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f832/893 (93.2%) over 899bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f881/982 (89.7%) over 993bp for offset 1 Sbay (test3) Longest island has f97 at 79% over 809bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 11k |____|_____|____|_____|_____|____|_____|____|_____|_____|____|_____|_____|____|_____|____|| 97f 79% 809bp Sb494full |..........|oooooooooooooooooooooooooooooooooooooooooooo| YDR195W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR195W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/657 (0.3%). Conflicting: 2/657 (0.3%). NoInfo: 2/657 (0.3%). Certain keep: 651/657 (99.1%) ########################## YDR197W (1170bp = 390AA) has 8 hits (CBS2) cytochrome b translational activator Spar (test2) orthologous hit at 86% f1166/1169 (99.7%) over 1170bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f344/344 (100.0%) over 344bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1151/1165 (98.8%) over 1170bp for offset 0 <== THIS IS REAL YDR197W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR197W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/658 (0.3%). Conflicting: 2/658 (0.3%). NoInfo: 2/658 (0.3%). Certain keep: 652/658 (99.1%) ########################## YDR200C (1815bp = 605AA) has 52 hits (VPS64) Flanking ORFs are: YDR196C and YDR198C. YDR200C skipped ########################## YDR201W (498bp = 166AA) has 29 hits (SPC19) component of spindle pole Spar (test2) orthologous hit at 81% f432/475 (90.9%) over 483bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f446/474 (94.1%) over 482bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f326/364 (89.6%) over 372bp for offset 0 Sbay (test3) Longest island has f95 at 76% over 300bp Sbay (test2) orthologous hit at 82% f102/125 (81.6%) over 126bp for offset 1 Sbay (test3) Longest island has f93 at 87% over 110bp 0 100 200 300 400 498 |_________________|_________________|_________________|_________________|_________________| 95f 76% 300bp Sb495brk |=====================================================>............> | 10093f 87% 110bp Sb495brk |==|ooooooooooooooooooo| YDR201W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDR201W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/659 (0.3%). Conflicting: 2/659 (0.3%). NoInfo: 2/659 (0.3%). Certain keep: 653/659 (99.1%) ########################## YDR202C (1056bp = 352AA) has 6 hits (RAV2) Regulator of (H+)-ATPase in Vacuolar membrane Flanking ORFs are: YDR200C and YDR202C. YDR202C skipped ########################## YDR204W (1008bp = 336AA) has 6 hits (COQ4) involved in ubiquinone biosynthesis Spar (test2) orthologous hit at 89% f1008/1008 (100.0%) over 1008bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f600/608 (98.7%) over 610bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f986/990 (99.6%) over 991bp for offset 0 <== THIS IS REAL YDR204W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR204W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/660 (0.3%). Conflicting: 2/660 (0.3%). NoInfo: 2/660 (0.3%). Certain keep: 654/660 (99.1%) ########################## YDR205W (2223bp = 741AA) has 14 hits (MSC2) Spar (test2) orthologous hit at 87% f2222/2223 (100.0%) over 2223bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1902/1930 (98.5%) over 1940bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2120/2189 (96.8%) over 2206bp for offset 2 <== THIS IS REAL YDR205W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR205W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/661 (0.3%). Conflicting: 2/661 (0.3%). NoInfo: 2/661 (0.3%). Certain keep: 655/661 (99.1%) ########################## YDR206W (2655bp = 885AA) has 21 hits (EBS1) similar to Est1, which is a putative..telomerase (104) Spar (test2) orthologous hit at 84% f2517/2594 (97.0%) over 2602bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1668/1703 (97.9%) over 1712bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2044/2157 (94.8%) over 2176bp for offset 0 <== THIS IS REAL YDR206W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR206W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/662 (0.3%). Conflicting: 2/662 (0.3%). NoInfo: 2/662 (0.3%). Certain keep: 656/662 (99.1%) ########################## YDR207C (2511bp = 837AA) has 18 hits (UME6) Ume6p is a C6 zinc finger URS1-bindi..g protein. (91) Spar (test2) orthologous hit at 89% f1315/1328 (99.0%) over 1337bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1326/1334 (99.4%) over 1341bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 65% f1219/1526 (79.9%) over 1576bp for offset 1 Sbay (test3) Longest island has f94 at 77% over 631bp <== THIS IS REAL 0 100 200300 400500 600 700800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 22k |__|___|__|___|__|___|___|__|___|__|___|___|__|___|__|___|__|___|___|__|___|__|___|___|__|| 94f 77% 631bp 97f 82% 232bp 79f 51% 222bp Sb495full |======================>...|=======>..........|=======>..> | YDR207C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR207C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/663 (0.3%). Conflicting: 2/663 (0.3%). NoInfo: 2/663 (0.3%). Certain keep: 657/663 (99.1%) ########################## YDR208W (2340bp = 780AA) has 18 hits (MSS4) Phosphatidylinositol 4-phosphate kinase Spar (test2) orthologous hit at 90% f2334/2334 (100.0%) over 2340bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1393/1459 (95.5%) over 1464bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f429/507 (84.6%) over 515bp for offset 0 Sbay (test3) Longest island has f95 at 78% over 452bp <== THIS IS REAL 0 100 200 300 400 500 600700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k2k |__|___|___|___|___|___|__|___|___|___|___|___|___|__|___|___|___|___|___|__|___|___|___|_| 95f 78% 452bp Sb495brk |================>.> | YDR208W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR208W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/664 (0.3%). Conflicting: 2/664 (0.3%). NoInfo: 2/664 (0.3%). Certain keep: 658/664 (99.1%) ########################## YDR211W (2139bp = 713AA) has 15 hits (GCD6) Translation initiation factor eIF-2B..on subunit (96) Spar (test2) orthologous hit at 91% f2125/2136 (99.5%) over 2138bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f680/683 (99.6%) over 687bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2136/2136 (100.0%) over 2139bp for offset 0 <== THIS IS REAL YDR211W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR211W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/665 (0.3%). Conflicting: 2/665 (0.3%). NoInfo: 2/665 (0.3%). Certain keep: 659/665 (99.1%) ########################## YDR212W (1680bp = 560AA) has 29 hits (TCP1) chaperonin subunit alpha Spar (test2) orthologous hit at 93% f1680/1680 (100.0%) over 1680bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1680/1680 (100.0%) over 1680bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1680/1680 (100.0%) over 1680bp for offset 0 <== THIS IS REAL YDR212W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR212W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/666 (0.3%). Conflicting: 2/666 (0.3%). NoInfo: 2/666 (0.3%). Certain keep: 660/666 (99.1%) ########################## YDR213W (2742bp = 914AA) has 382 hits (UPC2) zinc finger transcription factor of..omain type (127) Spar (test2) orthologous hit at 90% f2736/2742 (99.8%) over 2742bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1676/1676 (100.0%) over 1679bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1283/2068 (62.0%) over 2081bp for offset 0 Sbay (test3) Longest island has f98 at 82% over 1308bp <== THIS IS REAL 0 100200300 400500600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k2k |__|__|__|___|__|__|__|___|__|__|___|__|__|__|___|__|__|___|__|__|__|___|__|__|___|__|__|_| 99f 82% 768bp 98f 82% 1308bp Sb496full ||xxxxxxxxxxxxxxxxxxxxxxxx|==========================================| YDR213W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR213W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/667 (0.3%). Conflicting: 2/667 (0.3%). NoInfo: 2/667 (0.3%). Certain keep: 661/667 (99.1%) ########################## YDR214W (1053bp = 351AA) has 9 hits (AHA1) Hypothetical ORF Spar (test2) orthologous hit at 88% f1038/1046 (99.2%) over 1053bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1039/1046 (99.3%) over 1053bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 78% f619/643 (96.3%) over 650bp for offset 0 <== THIS IS REAL YDR214W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR214W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/668 (0.3%). Conflicting: 2/668 (0.3%). NoInfo: 2/668 (0.3%). Certain keep: 662/668 (99.1%) ########################## YDR216W (3972bp = 1324AA) has 35 hits (ADR1) positive transcriptional regulator ..tein genes (117) Spar (test2) orthologous hit at 87% f2748/2753 (99.8%) over 2757bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f1761/2344 (75.1%) over 2347bp for offset 2 Smik (test3) Longest island has f99 at 82% over 1770bp <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1373/2606 (52.7%) over 2621bp for offset 0 Sbay (test3) Longest island has f99 at 78% over 1363bp <== THIS IS REAL 0 102030040506070080901k1k 1k1k1k1k 1k1k1k 1k2k2k2k 2k2k2k2k 2k2k2k3k 3k3k3k 3k3k3k3k 3k3k3k |_|_|_|__|_|_|_|__|_|_|_|__|_|_|_|__|_|_|__|_|_|_|__|_|_|_|__|_|_|_|__|_|_|__|_|_|_|__|_|_| 99f 82% 1770bp 98f 78% 583bpSm221brk |=======================================>|xxxxxxxxxxxx| 99f 78% 1363bp 96f 77% 1273bp Sb498brk |==============================|oooooooooooooooooooooooooooo| YDR216W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR216W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/669 (0.3%). Conflicting: 2/669 (0.3%). NoInfo: 2/669 (0.3%). Certain keep: 663/669 (99.1%) ########################## YDR217C (3930bp = 1310AA) has 36 hits (RAD9) cell cycle arrest protein Spar (test2) orthologous hit at 85% f3886/3924 (99.0%) over 3930bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1673/1745 (95.9%) over 1761bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2885/3003 (96.1%) over 3024bp for offset 2 <== THIS IS REAL YDR217C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR217C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/670 (0.3%). Conflicting: 2/670 (0.3%). NoInfo: 2/670 (0.3%). Certain keep: 664/670 (99.1%) ########################## YDR218C (1272bp = 424AA) has 34 hits (SPR28) septin-related protein expressed du..porulation (96) Spar (test2) orthologous hit at 87% f1083/1086 (99.7%) over 1087bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f1076/1084 (99.3%) over 1086bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1069/1080 (99.0%) over 1083bp for offset 0 <== THIS IS REAL YDR218C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR218C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/671 (0.3%). Conflicting: 2/671 (0.3%). NoInfo: 2/671 (0.3%). Certain keep: 665/671 (99.1%) ########################## YDR224C (396bp = 132AA) has 10 hits (HTB1) Histone H2B (HTB1 and HTB2 code for n.. proteins) (105) Spar (test2) orthologous hit at 95% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL YDR224C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR224C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/672 (0.3%). Conflicting: 2/672 (0.3%). NoInfo: 2/672 (0.3%). Certain keep: 666/672 (99.1%) ########################## YDR225W (399bp = 133AA) has 12 hits (HTA1) Histone H2A (HTA1 and HTA2 code for n.. proteins) (105) Spar (test2) orthologous hit at 96% f399/399 (100.0%) over 399bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f399/399 (100.0%) over 399bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f399/399 (100.0%) over 399bp for offset 0 <== THIS IS REAL YDR225W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR225W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/673 (0.3%). Conflicting: 2/673 (0.3%). NoInfo: 2/673 (0.3%). Certain keep: 667/673 (99.1%) ########################## YDR226W (669bp = 223AA) has 4 hits (ADK1) adenylate kinase Spar (test2) orthologous hit at 92% f669/669 (100.0%) over 669bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f490/669 (73.2%) over 669bp for offset 0 Smik (test3) Longest island has f100 at 92% over 490bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 88% f669/669 (100.0%) over 669bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 669 |____________|____________|_____________|____________|_____________|____________|_________| 100f 92% 490bp Sm225full |.......................|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YDR226W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR226W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/674 (0.3%). Conflicting: 2/674 (0.3%). NoInfo: 2/674 (0.3%). Certain keep: 668/674 (99.1%) ########################## YDR227W (4077bp = 1359AA) has 33 hits (SIR4) regulator of silencing at HML, HMR,.. telomeres (94) Spar (test2) orthologous hit at 80% f4021/4066 (98.9%) over 4077bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 69% f1184/1361 (87.0%) over 1384bp for offset 0 Smik (test3) Longest island has f96 at 75% over 989bp <== THIS IS REAL Sbay (test2) orthologous hit at 63% f1048/1258 (83.3%) over 1289bp for offset 0 Sbay (test3) Longest island has f95 at 68% over 659bp <== THIS IS REAL 0 102030400506070809001k1k1k1k1k 1k1k1k1k1k 2k2k2k2k2k 2k2k2k2k 2k3k3k3k3k 3k3k3k3k3k 3k4k4k |_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_| 96f 75% 989bp Sm226brk |.........|oooooooooooooooooooo> | 95f 68% 659bp 90f 65% 262bp Sb500brk |=============>.......|=====> | YDR227W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR227W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/675 (0.3%). Conflicting: 2/675 (0.3%). NoInfo: 2/675 (0.3%). Certain keep: 669/675 (99.1%) ########################## YDR228C (1881bp = 627AA) has 587 hits (PCF11) Component of pre-mRNA cleavage and..n factor I (105) Spar (test2) orthologous hit at 88% f1195/1195 (100.0%) over 1195bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 79% f1227/1264 (97.1%) over 1273bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1125/1148 (98.0%) over 1152bp for offset 0 <== THIS IS REAL YDR228C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR228C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/676 (0.3%). Conflicting: 2/676 (0.3%). NoInfo: 2/676 (0.3%). Certain keep: 670/676 (99.1%) ########################## YDR231C (618bp = 206AA) has 4 hits (COX20) protein required for maturation and a..subunit II (120) Flanking ORFs are: YDR227W and YDR229W. YDR231C skipped ########################## YDR232W (1647bp = 549AA) has 10 hits (HEM1) 5-aminolevulinate synthase Spar (test2) orthologous hit at 91% f1647/1647 (100.0%) over 1647bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1643/1646 (99.8%) over 1647bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1023/1645 (62.2%) over 1647bp for offset 1 Sbay (test3) Longest island has f99 at 84% over 1034bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|____|____|_____|__| 100f 84% 615bp 99f 84% 1034bp Sb501full |================================|oooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YDR232W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR232W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/677 (0.3%). Conflicting: 2/677 (0.3%). NoInfo: 2/677 (0.3%). Certain keep: 671/677 (99.1%) ########################## YDR234W (2082bp = 694AA) has 7 hits (LYS4) homoaconitase Spar (test2) orthologous hit at 91% f2081/2081 (100.0%) over 2081bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1034/1034 (100.0%) over 1034bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1071/1074 (99.7%) over 1075bp for offset 0 <== THIS IS REAL YDR234W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR234W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/678 (0.3%). Conflicting: 2/678 (0.3%). NoInfo: 2/678 (0.3%). Certain keep: 672/678 (99.1%) ########################## YDR235W (1635bp = 545AA) has 25 hits (PRP42) U1 snRNP protein that shares 50% se.. TPR motif (176) Spar (test2) orthologous hit at 90% f1635/1635 (100.0%) over 1635bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1183/1188 (99.6%) over 1188bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1621/1630 (99.4%) over 1633bp for offset 0 <== THIS IS REAL YDR235W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR235W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/679 (0.3%). Conflicting: 2/679 (0.3%). NoInfo: 2/679 (0.3%). Certain keep: 673/679 (99.1%) ########################## YDR236C (657bp = 219AA) has 6 hits (FMN1) Riboflavin kinase Spar (test2) orthologous hit at 88% f657/657 (100.0%) over 657bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f654/656 (99.7%) over 657bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f651/656 (99.2%) over 657bp for offset 0 <== THIS IS REAL YDR236C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR236C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/680 (0.3%). Conflicting: 2/680 (0.3%). NoInfo: 2/680 (0.3%). Certain keep: 674/680 (99.1%) ########################## YDR237W (879bp = 293AA) has 3 hits (MRPL7) Mitochondrial ribosomal protein MRPL7 (YmL7) Spar (test2) orthologous hit at 90% f878/878 (100.0%) over 878bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f879/879 (100.0%) over 879bp for offset 0 <== THIS IS REAL YDR237W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR237W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/681 (0.3%). Conflicting: 2/681 (0.3%). NoInfo: 2/681 (0.3%). Certain keep: 675/681 (99.1%) ########################## YDR238C (2922bp = 974AA) has 10 hits (SEC26) encodes a subunit of yeast coatomer Spar (test2) orthologous hit at 92% f2922/2922 (100.0%) over 2922bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2913/2921 (99.7%) over 2922bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2085/2922 (71.4%) over 2922bp for offset 0 Sbay (test3) Longest island has f100 at 85% over 2085bp <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 22k |__|__|__|__|__|__|__|__|__|__|__|__|___|__|__|__|__|__|__|__|__|__|__|__|___|__|__|__|__|| 100f 87% 837bp 100f 85% 2085bp Sb502full |========================|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YDR238C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR238C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/682 (0.3%). Conflicting: 2/682 (0.3%). NoInfo: 2/682 (0.3%). Certain keep: 676/682 (99.1%) ########################## YDR240C (1479bp = 493AA) has 10 hits (SNU56) U1 snRNP protein Flanking ORFs are: YDR237W and YDR239C. YDR240C skipped ########################## YDR241W (288bp = 96AA) has 391 hits (BUD26) Flanking ORFs are: YDR237W and YDR239C. YDR241W skipped ########################## YDR242W (1650bp = 550AA) has 6 hits (AMD2) putative amidase Spar (test2) orthologous hit at 90% f1650/1650 (100.0%) over 1650bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1643/1649 (99.6%) over 1650bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1068/1647 (64.8%) over 1649bp for offset 2 Sbay (test3) Longest island has f99 at 82% over 1074bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|_____|____|_____|____|_____|____|_____|____|_____|____|____|_____|____|_____|__| 100f 79% 575bp 99f 82% 1074bp Sb502full |==============================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YDR242W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR242W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/683 (0.3%). Conflicting: 2/683 (0.3%). NoInfo: 2/683 (0.3%). Certain keep: 677/683 (99.1%) ########################## YDR243C (1767bp = 589AA) has 68 hits (PRP28) RNA helicase Spar (test2) orthologous hit at 86% f1767/1767 (100.0%) over 1767bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1650/1758 (93.9%) over 1767bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f1672/1754 (95.3%) over 1767bp for offset 0 <== THIS IS REAL YDR243C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR243C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/684 (0.3%). Conflicting: 2/684 (0.3%). NoInfo: 2/684 (0.3%). Certain keep: 678/684 (99.1%) ########################## YDR244W (1839bp = 613AA) has 23 hits (PEX5) 69-kDa protein containing tetratrico..peat (TPR) (100) Spar (test2) orthologous hit at 87% f1813/1829 (99.1%) over 1836bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f337/394 (85.5%) over 396bp for offset 1 Smik (test3) Longest island has f92 at 76% over 365bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1806/1832 (98.6%) over 1839bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k1k |___|____|____|____|____|____|____|____|____|___|____|____|____|____|____|____|____|____|_| 92f 76% 365bp 100f 81% 36bp Sm231brk |================>|> | YDR244W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR244W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/685 (0.3%). Conflicting: 2/685 (0.3%). NoInfo: 2/685 (0.3%). Certain keep: 679/685 (99.1%) ########################## YDR245W (1182bp = 394AA) has 8 hits (MNN10) galactosyltransferase Spar (test2) orthologous hit at 90% f1181/1181 (100.0%) over 1181bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f626/626 (100.0%) over 626bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1169/1179 (99.2%) over 1181bp for offset 0 <== THIS IS REAL YDR245W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR245W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/686 (0.3%). Conflicting: 2/686 (0.3%). NoInfo: 2/686 (0.3%). Certain keep: 680/686 (99.1%) ########################## YDR246W (660bp = 220AA) has 7 hits (TRS23) TRAPP subunit of 23 kDa Spar (test2) orthologous hit at 90% f657/660 (99.5%) over 660bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f360/362 (99.4%) over 362bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f372/658 (56.5%) over 660bp for offset 0 Sbay (test3) Longest island has f98 at 83% over 379bp <== THIS IS REAL 0 100 200 300 400 500 600 660 |____________|_____________|____________|_____________|_____________|____________|________| 98f 83% 379bp 97f 83% 286bp Sb503full |==================================================>|ooooooooooooooooooooooooooooooooooooo| YDR246W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR246W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/687 (0.3%). Conflicting: 2/687 (0.3%). NoInfo: 2/687 (0.3%). Certain keep: 681/687 (99.1%) ########################## YDR251W (2493bp = 831AA) has 50 hits (PAM1) multicopy suppressor of protein phosphatase 2A Spar (test2) orthologous hit at 88% f1627/1635 (99.5%) over 1640bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 53% f513/1311 (39.1%) over 1390bp for offset 0 Smik (test3) Longest island has f69 at 48% over 91bp Smik (test2) non-orthologous hit at 80% f862/876 (98.4%) over 878bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1624/1758 (92.4%) over 1770bp for offset 0 <== THIS IS REAL 0 100 200300 400 500600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k |__|___|__|___|___|__|___|__|___|___|__|___|__|___|___|__|___|__|___|___|__|___|___|__|___| 82f 48% 61b69f 48%87f 567f 52% 89bp 81f 58% 48bp Sm345brk |.......|x>........|xx>...|=>..|==>..............|> | YDR251W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR251W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/688 (0.3%). Conflicting: 2/688 (0.3%). NoInfo: 2/688 (0.3%). Certain keep: 682/688 (99.1%) ########################## YDR252W (450bp = 150AA) has 13 hits (BTT1) negative regulator of RNA polymerase II Spar (test2) orthologous hit at 87% f450/450 (100.0%) over 450bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f216/225 (96.0%) over 226bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f445/449 (99.1%) over 450bp for offset 0 <== THIS IS REAL YDR252W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR252W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/689 (0.3%). Conflicting: 2/689 (0.3%). NoInfo: 2/689 (0.3%). Certain keep: 683/689 (99.1%) ########################## YDR253C (576bp = 192AA) has 18 hits (MET32) zinc finger DNA binding factor, tran.. to Met31p (162) Spar (test2) orthologous hit at 92% f576/576 (100.0%) over 576bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f568/568 (100.0%) over 568bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f192/192 (100.0%) over 192bp for offset 0 Sbay (test3) Longest island has f100 at 80% over 192bp 0 100 200 300 400 500 576 |______________|_______________|______________|_______________|_______________|___________| 100f 80% 192bp Sb504brk |=============================| YDR253C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDR253C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/690 (0.3%). Conflicting: 2/690 (0.3%). NoInfo: 2/690 (0.3%). Certain keep: 684/690 (99.1%) ########################## YDR254W (1377bp = 459AA) has 23 hits (CHL4) chromosome segregation protein Spar (test2) orthologous hit at 88% f1376/1376 (100.0%) over 1376bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1005/1374 (73.1%) over 1377bp for offset 0 Smik (test3) Longest island has f99 at 82% over 1011bp <== THIS IS REAL Sbay (test2) orthologous hit at 76% f618/624 (99.0%) over 626bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|_____|______|_____|______|_____|______|_____|______|_____|_____| 98f 82% 369bp 99f 82% 1011bp Sm237full |=======================|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YDR254W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR254W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/691 (0.3%). Conflicting: 2/691 (0.3%). NoInfo: 2/691 (0.3%). Certain keep: 685/691 (99.1%) ########################## YDR256C (1548bp = 516AA) has 9 hits (CTA1) catalase A Spar (test2) orthologous hit at 92% f1543/1543 (100.0%) over 1543bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1263/1273 (99.2%) over 1275bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1536/1536 (100.0%) over 1536bp for offset 0 <== THIS IS REAL YDR256C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR256C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/692 (0.3%). Conflicting: 2/692 (0.3%). NoInfo: 2/692 (0.3%). Certain keep: 686/692 (99.1%) ########################## YDR257C (1485bp = 495AA) has 34 hits (RMS1) (putative) transcriptional regulator Spar (test2) orthologous hit at 87% f672/676 (99.4%) over 677bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f863/868 (99.4%) over 869bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1427/1477 (96.6%) over 1485bp for offset 0 <== THIS IS REAL YDR257C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR257C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/693 (0.3%). Conflicting: 2/693 (0.3%). NoInfo: 2/693 (0.3%). Certain keep: 687/693 (99.1%) ########################## YDR258C (2436bp = 812AA) has 20 hits (HSP78) Mitochondrial heat shock protein 78 kDa Spar (test2) orthologous hit at 91% f2096/2096 (100.0%) over 2096bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f437/437 (100.0%) over 437bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2385/2428 (98.2%) over 2436bp for offset 0 <== THIS IS REAL YDR258C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR258C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/694 (0.3%). Conflicting: 2/694 (0.3%). NoInfo: 2/694 (0.3%). Certain keep: 688/694 (99.1%) ########################## YDR259C (1152bp = 384AA) has 137 hits (YAP6) basic leucine zipper transcription factor Spar (test2) orthologous hit at 89% f562/562 (100.0%) over 562bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 68% f740/969 (76.4%) over 992bp for offset 0 Smik (test3) Longest island has f96 at 76% over 696bp <== THIS IS REAL Sbay (test2) orthologous hit at 68% f978/1128 (86.7%) over 1152bp for offset 0 Sbay (test3) Longest island has f95 at 71% over 625bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|______|_______|_______|_______|_______|______|____| 96f 76% 696bp Sm239brk |=====================================================>......................> | 95f 71% 625bp 100f 78% 246bp Sb505full |===============================================>........................|================|=> YDR259C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR259C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/695 (0.3%). Conflicting: 2/695 (0.3%). NoInfo: 2/695 (0.3%). Certain keep: 689/695 (99.1%) ########################## YDR260C (513bp = 171AA) has 2 hits (SWM1) Spore Wall Maturation 1 Spar (test2) orthologous hit at 92% f513/513 (100.0%) over 513bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f454/506 (89.7%) over 506bp for offset 0 Sbay (test3) Longest island has f100 at 80% over 454bp <== THIS IS REAL 0 100 200 300 400 500513 |________________|_________________|________________|_________________|________________|__| 100f 80% 454bp Sb505brk |.........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YDR260C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR260C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/696 (0.3%). Conflicting: 2/696 (0.3%). NoInfo: 2/696 (0.3%). Certain keep: 690/696 (99.1%) ########################## YDR261C (1689bp = 563AA) has 15 hits (EXG2) Exo-1,3-b-glucanase Spar (test2) orthologous hit at 88% f1689/1689 (100.0%) over 1689bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f833/837 (99.5%) over 839bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f1624/1681 (96.6%) over 1689bp for offset 2 <== THIS IS REAL YDR261C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR261C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/697 (0.3%). Conflicting: 2/697 (0.3%). NoInfo: 2/697 (0.3%). Certain keep: 691/697 (99.1%) ########################## YDR263C (1293bp = 431AA) has 20 hits (DIN7) involved in DNA repair Spar (test2) orthologous hit at 87% f1293/1293 (100.0%) over 1293bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f414/414 (100.0%) over 414bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1176/1239 (94.9%) over 1245bp for offset 2 <== THIS IS REAL YDR263C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR263C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/698 (0.3%). Conflicting: 2/698 (0.3%). NoInfo: 2/698 (0.3%). Certain keep: 692/698 (99.1%) ########################## YDR264C (2295bp = 765AA) has 13 hits (AKR1) Ankyrin repeat-containing protein Spar (test2) orthologous hit at 89% f1676/1722 (97.3%) over 1729bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2288/2294 (99.7%) over 2295bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2274/2289 (99.3%) over 2295bp for offset 0 <== THIS IS REAL YDR264C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR264C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/699 (0.3%). Conflicting: 2/699 (0.3%). NoInfo: 2/699 (0.3%). Certain keep: 693/699 (99.1%) ########################## YDR265W (1014bp = 338AA) has 5 hits (PEX10) C3HC4 zinc-binding integral peroxiso..ne protein (100) Spar (test2) orthologous hit at 87% f1011/1013 (99.8%) over 1014bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1007/1013 (99.4%) over 1014bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f988/1010 (97.8%) over 1014bp for offset 0 <== THIS IS REAL YDR265W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR265W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/700 (0.3%). Conflicting: 2/700 (0.3%). NoInfo: 2/700 (0.3%). Certain keep: 694/700 (99.1%) ########################## YDR268W (1140bp = 380AA) has 7 hits (MSW1) mitochondrial tryptophanyl-tRNA synthetase Spar (test2) orthologous hit at 90% f1140/1140 (100.0%) over 1140bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f324/324 (100.0%) over 324bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1133/1138 (99.6%) over 1140bp for offset 0 <== THIS IS REAL YDR268W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR268W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/701 (0.3%). Conflicting: 2/701 (0.3%). NoInfo: 2/701 (0.3%). Certain keep: 695/701 (99.1%) ########################## YDR270W (3015bp = 1005AA) has 19 hits (CCC2) Cu(2+)-transporting ATPase . YDR270W skipped ########################## YDR272W (825bp = 275AA) has 13 hits (GLO2) Cytoplasmic glyoxylase-II Spar (test2) orthologous hit at 90% f821/824 (99.6%) over 825bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f822/824 (99.8%) over 825bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f814/823 (98.9%) over 825bp for offset 0 <== THIS IS REAL YDR272W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR272W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/702 (0.3%). Conflicting: 2/702 (0.3%). NoInfo: 2/702 (0.3%). Certain keep: 696/702 (99.1%) ########################## YDR273W (1098bp = 366AA) has 21 hits (DON1) Spar (test2) orthologous hit at 77% f705/770 (91.6%) over 774bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f892/1076 (82.9%) over 1098bp for offset 1 Smik (test3) Longest island has f98 at 77% over 697bp <== THIS IS REAL Sbay (test2) orthologous hit at 68% f489/514 (95.1%) over 520bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|_______|_______|________|_______|_______|_______|_______|________| 98f 77% 697bp Sm386full |========================================================>................................| YDR273W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR273W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/703 (0.3%). Conflicting: 2/703 (0.3%). NoInfo: 2/703 (0.3%). Certain keep: 697/703 (99.1%) ########################## YDR276C (168bp = 56AA) has 18 hits (PMP3) hypothetical transmembrane protein Spar (test2) orthologous hit at 95% f168/168 (100.0%) over 168bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f168/168 (100.0%) over 168bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f168/168 (100.0%) over 168bp for offset 0 <== THIS IS REAL YDR276C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR276C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/704 (0.3%). Conflicting: 2/704 (0.3%). NoInfo: 2/704 (0.3%). Certain keep: 698/704 (99.1%) ########################## YDR277C (1302bp = 434AA) has 11 hits (MTH1) Protein is 61% identical to Msn3p Spar (test2) orthologous hit at 91% f1302/1302 (100.0%) over 1302bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1298/1299 (99.9%) over 1302bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1287/1299 (99.1%) over 1302bp for offset 0 <== THIS IS REAL YDR277C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR277C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/705 (0.3%). Conflicting: 2/705 (0.3%). NoInfo: 2/705 (0.3%). Certain keep: 699/705 (99.1%) ########################## YDR280W (918bp = 306AA) has 5 hits (RRP45) Putative 3'->5' exoribonuclease; comp..onucleases (127) Spar (test2) orthologous hit at 91% f918/918 (100.0%) over 918bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f914/917 (99.7%) over 918bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f741/741 (100.0%) over 741bp for offset 0 <== THIS IS REAL YDR280W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR280W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/706 (0.3%). Conflicting: 2/706 (0.3%). NoInfo: 2/706 (0.3%). Certain keep: 700/706 (99.2%) ########################## YDR281C (315bp = 105AA) has 4 hits (PHM6) phosphate metabolism; transcription is..PHO system (104) Spar (test2) orthologous hit at 85% f315/315 (100.0%) over 315bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f281/310 (90.6%) over 313bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f275/304 (90.5%) over 309bp for offset 0 <== THIS IS REAL YDR281C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR281C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/707 (0.3%). Conflicting: 2/707 (0.3%). NoInfo: 2/707 (0.3%). Certain keep: 701/707 (99.2%) ########################## YDR283C (4980bp = 1660AA) has 99 hits (GCN2) eukaryotic initiation factor 2 alph..ha) kinase (101) Spar (test2) orthologous hit at 92% f3442/3593 (95.8%) over 3593bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3675/3675 (100.0%) over 3675bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1224/1233 (99.3%) over 1234bp for offset 0 <== THIS IS REAL YDR283C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR283C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/708 (0.3%). Conflicting: 2/708 (0.3%). NoInfo: 2/708 (0.3%). Certain keep: 702/708 (99.2%) ########################## YDR284C (870bp = 290AA) has 7 hits (DPP1) Diacylglycerol Pyrophosphate Phosphatase Spar (test2) orthologous hit at 90% f856/862 (99.3%) over 863bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f863/869 (99.3%) over 870bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f858/868 (98.8%) over 870bp for offset 0 <== THIS IS REAL YDR284C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR284C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/709 (0.3%). Conflicting: 2/709 (0.3%). NoInfo: 2/709 (0.3%). Certain keep: 703/709 (99.2%) ########################## YDR285W (2628bp = 876AA) has 129 hits (ZIP1) synaptonemal complex protein Spar (test2) orthologous hit at 86% f2627/2627 (100.0%) over 2627bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f2583/2619 (98.6%) over 2627bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2552/2617 (97.5%) over 2627bp for offset 0 <== THIS IS REAL YDR285W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR285W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/710 (0.3%). Conflicting: 2/710 (0.3%). NoInfo: 2/710 (0.3%). Certain keep: 704/710 (99.2%) ########################## YDR289C (1230bp = 410AA) has 415 hits (RTT103) regulator of Ty1 Transposition Flanking ORFs are: YDR284C and YDR286C. YDR289C skipped ########################## YDR292C (1866bp = 622AA) has 12 hits (SRP101) signal recognition particle recept..ha subunit (98) Spar (test2) orthologous hit at 90% f1865/1865 (100.0%) over 1865bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1196/1239 (96.5%) over 1241bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1866/1866 (100.0%) over 1866bp for offset 0 <== THIS IS REAL YDR292C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR292C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/711 (0.3%). Conflicting: 2/711 (0.3%). NoInfo: 2/711 (0.3%). Certain keep: 705/711 (99.2%) ########################## YDR293C (3753bp = 1251AA) has 30 hits (SSD1) Product of gene unknown Spar (test2) orthologous hit at 87% f3472/3634 (95.5%) over 3651bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3750/3750 (100.0%) over 3753bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3348/3380 (99.1%) over 3384bp for offset 2 <== THIS IS REAL YDR293C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR293C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/712 (0.3%). Conflicting: 2/712 (0.3%). NoInfo: 2/712 (0.3%). Certain keep: 706/712 (99.2%) ########################## YDR294C (1770bp = 590AA) has 4 hits (DPL1) dihydrosphingosine phosphate lyase (a..ate lyase) (121) Spar (test2) orthologous hit at 90% f1770/1770 (100.0%) over 1770bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1761/1768 (99.6%) over 1770bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1762/1764 (99.9%) over 1765bp for offset 0 <== THIS IS REAL YDR294C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR294C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/713 (0.3%). Conflicting: 2/713 (0.3%). NoInfo: 2/713 (0.3%). Certain keep: 707/713 (99.2%) ########################## YDR295C (2025bp = 675AA) has 34 hits (PLO2) Ploidy-related Spar (test2) orthologous hit at 87% f2025/2025 (100.0%) over 2025bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2005/2021 (99.2%) over 2025bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1974/2016 (97.9%) over 2025bp for offset 0 <== THIS IS REAL YDR295C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR295C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/714 (0.3%). Conflicting: 2/714 (0.3%). NoInfo: 2/714 (0.3%). Certain keep: 708/714 (99.2%) ########################## YDR296W (681bp = 227AA) has 3 hits (MHR1) Involved in mitochondrial homologous D..ombination (96) Spar (test2) orthologous hit at 88% f680/680 (100.0%) over 680bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f681/681 (100.0%) over 681bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f530/665 (79.7%) over 667bp for offset 2 Sbay (test3) Longest island has f99 at 79% over 536bp <== THIS IS REAL 0 100 200 300 400 500 600 681 |____________|____________|____________|____________|_____________|____________|__________| 99f 79% 536bp Sb511full |................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | YDR296W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR296W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/715 (0.3%). Conflicting: 2/715 (0.3%). NoInfo: 2/715 (0.3%). Certain keep: 709/715 (99.2%) ########################## YDR297W (1050bp = 350AA) has 12 hits (SUR2) Syringomycin response protein 2 Spar (test2) orthologous hit at 91% f1050/1050 (100.0%) over 1050bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f915/915 (100.0%) over 915bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1044/1048 (99.6%) over 1049bp for offset 0 <== THIS IS REAL YDR297W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR297W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/716 (0.3%). Conflicting: 2/716 (0.3%). NoInfo: 2/716 (0.3%). Certain keep: 710/716 (99.2%) ########################## YDR298C (639bp = 213AA) has 5 hits (ATP5) ATP synthase subunit 5; oligomycin sen..ng protein (107) Spar (test2) orthologous hit at 92% f639/639 (100.0%) over 639bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f639/639 (100.0%) over 639bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f638/638 (100.0%) over 638bp for offset 0 <== THIS IS REAL YDR298C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR298C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/717 (0.3%). Conflicting: 2/717 (0.3%). NoInfo: 2/717 (0.3%). Certain keep: 711/717 (99.2%) ########################## YDR299W (1605bp = 535AA) has 530 hits (BFR2) involved in secretion Spar (test2) orthologous hit at 88% f1604/1605 (99.9%) over 1605bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1392/1536 (90.6%) over 1551bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 53% f445/1112 (40.0%) over 1179bp for offset 0 Sbay (test3) Longest island has f75 at 47% over 116bp Sbay (test2) non-orthologous hit at 53% f503/1101 (45.7%) over 1170bp for offset 1 Sbay (test3) Longest island has f79 at 59% over 80bp Sbay (test2) non-orthologous hit at 54% f312/801 (39.0%) over 851bp for offset 1 Sbay (test3) Longest island has f81 at 58% over 160bp Sbay (test2) non-orthologous hit at 53% f339/803 (42.2%) over 844bp for offset 0 Sbay (test3) Longest island has f84 at 56% over 143bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 11k |____|_____|____|_____|_____|____|_____|____|_____|_____|____|_____|____|_____|_____|____|| 90f 565f 59% 49bp 77f 54% 48bp 75f 47% 116bp 73f 54% 78bp Sb809full |...|==>.|o>..............|xx>..............|======>.........|ooo>> | 87f 6479f 59% 82f 42%67f 47% 5778f 46% 69bp 87f 52% 62bp Sb351full |...|oo>..|ooo>...|x>....|oo>......|xxx>...................|oo>..> | 81f 58% 160b93f 575f 51% 79f 51% 71bp Sb940full |.........|oooooooo>..|xxx>|==>....|xxx>........> | 88f 584f 56% 143bp 73f 47% 77b82f 53% 72b83f 56% 48bp Sb332full |....|o>..|=======>.....|xxx>......|===>......|oo> | YDR299W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDR299W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/718 (0.3%). Conflicting: 2/718 (0.3%). NoInfo: 2/718 (0.3%). Certain keep: 712/718 (99.2%) ########################## YDR300C (1287bp = 429AA) has 11 hits (PRO1) gamma-glutamyl kinase Spar (test2) orthologous hit at 90% f1287/1287 (100.0%) over 1287bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1280/1286 (99.5%) over 1287bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f1112/1139 (97.6%) over 1140bp for offset 2 <== THIS IS REAL YDR300C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR300C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/719 (0.3%). Conflicting: 2/719 (0.3%). NoInfo: 2/719 (0.3%). Certain keep: 713/719 (99.2%) ########################## YDR301W (4074bp = 1358AA) has 32 hits (CFT1) Component of pre-mRNA cleavage fact..r 1 (PF I) (157) Spar (test2) orthologous hit at 88% f3688/3819 (96.6%) over 3827bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 85% f4063/4067 (99.9%) over 4074bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2773/2782 (99.7%) over 2786bp for offset 0 <== THIS IS REAL YDR301W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR301W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/720 (0.3%). Conflicting: 2/720 (0.3%). NoInfo: 2/720 (0.3%). Certain keep: 714/720 (99.2%) ########################## YDR302W (660bp = 220AA) has 20 hits (GPI11) GPI-phosphoethanolamine transferase ..7p subunit (93) Spar (test2) orthologous hit at 92% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL YDR302W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR302W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/721 (0.3%). Conflicting: 2/721 (0.3%). NoInfo: 2/721 (0.3%). Certain keep: 715/721 (99.2%) ########################## YDR303C (2658bp = 886AA) has 65 hits (RSC3) RSC complex component Spar (test2) orthologous hit at 86% f1399/1408 (99.4%) over 1410bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2206/2652 (83.2%) over 2657bp for offset 0 Smik (test3) Longest island has f99 at 82% over 2193bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2623/2653 (98.9%) over 2658bp for offset 0 <== THIS IS REAL 0 100200 300400500 600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k2k |__|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|__|___|__|___|__|__|___|__|___|_| 99f 91% 439bp 99f 82% 2193bp Sm379full ||oooooooooooooo|=========================================================================| YDR303C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR303C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/722 (0.3%). Conflicting: 2/722 (0.3%). NoInfo: 2/722 (0.3%). Certain keep: 716/722 (99.2%) ########################## YDR304C (678bp = 226AA) has 24 hits (CPR5) Cyclophilin D, Peptidyl-prolyl cis-tr..somerase D (95) Spar (test2) non-orthologous hit at 89% f678/678 (100.0%) over 678bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f678/678 (100.0%) over 678bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f647/666 (97.1%) over 672bp for offset 0 <== THIS IS REAL YDR304C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR304C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/723 (0.3%). Conflicting: 2/723 (0.3%). NoInfo: 2/723 (0.3%). Certain keep: 717/723 (99.2%) ########################## YDR308C (423bp = 141AA) has 10 hits (SRB7) RNA polymerase II holoenzyme component Spar (test2) orthologous hit at 92% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 89% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL YDR308C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR308C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/724 (0.3%). Conflicting: 2/724 (0.3%). NoInfo: 2/724 (0.3%). Certain keep: 718/724 (99.2%) ########################## YDR309C (1152bp = 384AA) has 6 hits (GIC2) Cdc42 binding protein, involved in bu.. emergence (91) Spar (test2) orthologous hit at 89% f1144/1146 (99.8%) over 1152bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f651/1141 (57.1%) over 1152bp for offset 0 Smik (test3) Longest island has f96 at 79% over 676bp <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1091/1140 (95.7%) over 1152bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|______|_______|_______|_______|_______|______|____| 96f 79% 676bp 98f 85% 461bp Sm377full |===================================================>.|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YDR309C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR309C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/725 (0.3%). Conflicting: 2/725 (0.3%). NoInfo: 2/725 (0.3%). Certain keep: 719/725 (99.2%) ########################## YDR310C (3189bp = 1063AA) has 60 hits (SUM1) nuclear protein involved in silencing Spar (test2) orthologous hit at 88% f3173/3180 (99.8%) over 3189bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 72% f1519/1786 (85.1%) over 1810bp for offset 0 Smik (test3) Longest island has f98 at 78% over 1414bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f2016/2243 (89.9%) over 2270bp for offset 2 Sbay (test3) Longest island has f97 at 75% over 1950bp <== THIS IS REAL 0 100200300400506007008009001k 1k1k 1k 1k 1k 1k1k 1k 1k 2k 2k 2k2k 2k 2k 2k 2k 2k2k 3k 3k 3k |_|__|__|__|__|_|__|__|__|__|__|_|__|__|__|__|_|__|__|__|__|__|_|__|__|__|__|__|_|__|__|__| 98f 78% 1414bp Sm377full |======================================>...........> | 97f 75% 1950bp Sb975full |======================================================>........> | YDR310C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR310C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/726 (0.3%). Conflicting: 2/726 (0.3%). NoInfo: 2/726 (0.3%). Certain keep: 720/726 (99.2%) ########################## YDR311W (1929bp = 643AA) has 64 hits (TFB1) Component of transcription initiatio..Da subunit (108) Spar (test2) orthologous hit at 90% f1923/1927 (99.8%) over 1928bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1922/1925 (99.8%) over 1926bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1333/1346 (99.0%) over 1349bp for offset 0 <== THIS IS REAL YDR311W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR311W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/727 (0.3%). Conflicting: 2/727 (0.3%). NoInfo: 2/727 (0.3%). Certain keep: 721/727 (99.2%) ########################## YDR312W (1362bp = 454AA) has 62 hits (SSF2) possibly involved in mating Spar (test2) orthologous hit at 88% f1362/1362 (100.0%) over 1362bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 73% f620/1202 (51.6%) over 1232bp for offset 2 Smik (test3) Longest island has f99 at 79% over 542bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 73% f1123/1324 (84.8%) over 1355bp for offset 2 Sbay (test3) Longest island has f98 at 83% over 916bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|______|_____|______|_____|______|______|_____|______|_____|____| 100f 84% 240bp 99f 79% 542bp Sm377full |.......|xxxxxxxxxxxxxx>|oooooooooooooooooooooooooooooooooo>.....................> | 98f 83% 916bp Sb42full |===========================================================>............................>| YDR312W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR312W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/728 (0.3%). Conflicting: 2/728 (0.3%). NoInfo: 2/728 (0.3%). Certain keep: 722/728 (99.2%) ########################## YDR313C (861bp = 287AA) has 12 hits (PIB1) phosphatidylinositol(3)-phosphate bin..ng protein (92) Spar (test2) orthologous hit at 87% f655/663 (98.8%) over 664bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f661/661 (100.0%) over 661bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 56% f153/403 (38.0%) over 426bp for offset 1 Sbay (test3) Longest island has f68 at 57% over 53bp Sbay (test2) non-orthologous hit at 58% f135/212 (63.7%) over 218bp for offset 0 Sbay (test3) Longest island has f87 at 56% over 97bp Sbay (test2) non-orthologous hit at 63% f94/167 (56.3%) over 175bp for offset 0 Sbay (test3) Longest island has f77 at 69% over 96bp 0 100 200 300 400 500 600 700 800 861 |_________|_________|__________|_________|__________|_________|__________|_________|______| 100f 69% 36b83f 589f 50% 3668f 57% 53bp Sb567full |.......|===>.......|===>|xx>......|xxxx>...> | 89f 61087f 56% 97bp75f 68% 40bp Sb758brk |====|>|=========>.|ooo> | 1067f 77f 69% 96bp Sb26full |.|>|ooo|xxxxxxxxx> | YDR313C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDR313C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/729 (0.3%). Conflicting: 2/729 (0.3%). NoInfo: 2/729 (0.3%). Certain keep: 723/729 (99.2%) ########################## YDR315C (846bp = 282AA) has 26 hits (IPK1) inositol 1,3,4,5,6-pentakisphosphate .. 2-kinase) (103) Spar (test2) orthologous hit at 87% f846/846 (100.0%) over 846bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f831/841 (98.8%) over 843bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f790/805 (98.1%) over 808bp for offset 1 <== THIS IS REAL YDR315C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR315C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/730 (0.3%). Conflicting: 2/730 (0.3%). NoInfo: 2/730 (0.3%). Certain keep: 724/730 (99.2%) ########################## YDR318W (756bp = 252AA) has 20 hits (MCM21) involved in minichromosome maintenance Spar (test2) orthologous hit at 89% f756/756 (100.0%) over 756bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f458/458 (100.0%) over 458bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f756/756 (100.0%) over 756bp for offset 0 <== THIS IS REAL YDR318W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR318W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/731 (0.3%). Conflicting: 2/731 (0.3%). NoInfo: 2/731 (0.3%). Certain keep: 725/731 (99.2%) ########################## YDR320C (2007bp = 669AA) has 17 hits (SWA2) auxilin-like protein Spar (test2) orthologous hit at 84% f1977/1997 (99.0%) over 2007bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1933/1994 (96.9%) over 2007bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f975/1062 (91.8%) over 1081bp for offset 0 <== THIS IS REAL YDR320C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR320C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/732 (0.3%). Conflicting: 2/732 (0.3%). NoInfo: 2/732 (0.3%). Certain keep: 726/732 (99.2%) ########################## YDR320C-A (219bp = 73AA) has 7 hits (HSK2) Hypothetical ORF identified by homolo..487:31-36. (118) Spar (test2) orthologous hit at 93% f218/218 (100.0%) over 218bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f219/219 (100.0%) over 219bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f218/218 (100.0%) over 218bp for offset 0 <== THIS IS REAL YDR320C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR320C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/733 (0.3%). Conflicting: 2/733 (0.3%). NoInfo: 2/733 (0.3%). Certain keep: 727/733 (99.2%) ########################## YDR321W (1146bp = 382AA) has 7 hits (ASP1) Asparaginase I, intracellular isozyme Spar (test2) orthologous hit at 92% f1146/1146 (100.0%) over 1146bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1146/1146 (100.0%) over 1146bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1135/1144 (99.2%) over 1146bp for offset 0 <== THIS IS REAL YDR321W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR321W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/734 (0.3%). Conflicting: 2/734 (0.3%). NoInfo: 2/734 (0.3%). Certain keep: 728/734 (99.2%) ########################## YDR322W (1104bp = 368AA) has 7 hits (MRPL35) Mitochondrial ribosomal protein MRP..35 (YmL35) (91) Spar (test2) orthologous hit at 89% f1089/1089 (100.0%) over 1089bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f884/897 (98.6%) over 899bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1052/1093 (96.2%) over 1104bp for offset 0 <== THIS IS REAL YDR322W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR322W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/735 (0.3%). Conflicting: 2/735 (0.3%). NoInfo: 2/735 (0.3%). Certain keep: 729/735 (99.2%) ########################## YDR322C-A (291bp = 97AA) has 14 hits (TIM11) subunit e of mitochondrial F1F0-ATPase Spar (test2) non-orthologous hit at 89% f291/291 (100.0%) over 291bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f291/291 (100.0%) over 291bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f283/290 (97.6%) over 291bp for offset 0 <== THIS IS REAL YDR322C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR322C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/736 (0.3%). Conflicting: 2/736 (0.3%). NoInfo: 2/736 (0.3%). Certain keep: 730/736 (99.2%) ########################## YDR323C (1548bp = 516AA) has 20 hits (PEP7) cytosolic and peripheral membrane pr..r function (174) Spar (test2) orthologous hit at 89% f1124/1124 (100.0%) over 1124bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1542/1547 (99.7%) over 1548bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1102/1171 (94.1%) over 1181bp for offset 0 <== THIS IS REAL YDR323C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR323C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/737 (0.3%). Conflicting: 2/737 (0.3%). NoInfo: 2/737 (0.3%). Certain keep: 731/737 (99.2%) ########################## YDR324C (2331bp = 777AA) has 40 hits (UTP4) Protein required for cell viability Spar (test2) non-orthologous hit at 90% f2094/2097 (99.9%) over 2098bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2279/2328 (97.9%) over 2331bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f959/993 (96.6%) over 995bp for offset 0 <== THIS IS REAL YDR324C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR324C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/738 (0.3%). Conflicting: 2/738 (0.3%). NoInfo: 2/738 (0.3%). Certain keep: 732/738 (99.2%) ########################## YDR325W (3156bp = 1052AA) has 51 hits (YCG1) Yeast Condensin G Spar (test2) orthologous hit at 88% f2968/2986 (99.4%) over 2995bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2550/2575 (99.0%) over 2576bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1586/1651 (96.1%) over 1662bp for offset 0 <== THIS IS REAL YDR325W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR325W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/739 (0.3%). Conflicting: 2/739 (0.3%). NoInfo: 2/739 (0.3%). Certain keep: 733/739 (99.2%) ########################## YDR328C (585bp = 195AA) has 46 hits (SKP1) Skp1p encodes Cbf3d, a 29 Kd kinetoch..lve Skp1p. (351) Flanking ORFs are: YDR324C and YDR326C. YDR328C skipped ########################## YDR329C (1326bp = 442AA) has 7 hits (PEX3) 48-kDa peroxisomal integral membrane protein Spar (test2) orthologous hit at 88% f1317/1320 (99.8%) over 1326bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f639/639 (100.0%) over 639bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1128/1143 (98.7%) over 1152bp for offset 0 <== THIS IS REAL YDR329C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR329C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/740 (0.3%). Conflicting: 2/740 (0.3%). NoInfo: 2/740 (0.3%). Certain keep: 734/740 (99.2%) ########################## YDR331W (1236bp = 412AA) has 12 hits (GPI8) (putative) transamidase involved in ..attachment (101) Spar (test2) orthologous hit at 90% f1236/1236 (100.0%) over 1236bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1231/1235 (99.7%) over 1236bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1224/1234 (99.2%) over 1236bp for offset 0 <== THIS IS REAL YDR331W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR331W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/741 (0.3%). Conflicting: 2/741 (0.3%). NoInfo: 2/741 (0.3%). Certain keep: 735/741 (99.2%) ########################## YDR334W (4545bp = 1515AA) has 127 hits (SWR1) DEAH-box protein, putative RNA helicase Spar (test2) orthologous hit at 89% f4527/4538 (99.8%) over 4545bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f3036/3045 (99.7%) over 3050bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f2652/3241 (81.8%) over 3314bp for offset 0 Sbay (test3) Longest island has f95 at 78% over 1881bp <== THIS IS REAL 01020304050607080901k1k1k1k1k1k1k1k1k1k2k2k2k2k2k2k2k2k2k2k3k3k3k3k3k3k3k3k3k3k4k4k4k4k4k44k ||_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|| 94f 74% 641bp 95f 78% 1881bp Sb444brk |===========>................|=====================================> | YDR334W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR334W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/742 (0.3%). Conflicting: 2/742 (0.3%). NoInfo: 2/742 (0.3%). Certain keep: 736/742 (99.2%) ########################## YDR335W (3675bp = 1225AA) has 17 hits (MSN5) member of major facilitator superfa..e response (116) Spar (test2) orthologous hit at 92% f2961/2961 (100.0%) over 2961bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1669/1673 (99.8%) over 1674bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f3171/3675 (86.3%) over 3675bp for offset 1 Sbay (test3) Longest island has f100 at 85% over 3171bp <== THIS IS REAL 0 10200304005060070800901k1k 1k1k 1k1k 1k1k 1k1k2k 2k2k 2k2k 2k2k 2k2k 2k3k3k 3k3k 3k3k 3k3k |_|_|__|_|__|_|__|_|__|_|_|__|_|__|_|__|_|__|_|_|__|_|__|_|__|_|__|_|__|_|_|__|_|__|_|__|_| 100f 89% 504100f 85% 3171bp Sb445full |===========|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YDR335W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR335W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/743 (0.3%). Conflicting: 2/743 (0.3%). NoInfo: 2/743 (0.3%). Certain keep: 737/743 (99.2%) ########################## YDR337W (861bp = 287AA) has 11 hits (MRPS28) Mitochondrial ribosomal protein MRP.. coli S15) (97) Spar (test2) orthologous hit at 90% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f662/684 (96.8%) over 684bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f424/435 (97.5%) over 436bp for offset 0 <== THIS IS REAL YDR337W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR337W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/744 (0.3%). Conflicting: 2/744 (0.3%). NoInfo: 2/744 (0.3%). Certain keep: 738/744 (99.2%) ########################## YDR342C (1713bp = 571AA) has 117 hits (HXT7) Hexose transporter Spar (test2) orthologous hit at 91% f851/851 (100.0%) over 851bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 90% f1713/1713 (100.0%) over 1713bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f998/1001 (99.7%) over 1002bp for offset 0 <== THIS IS REAL YDR342C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR342C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/745 (0.3%). Conflicting: 2/745 (0.3%). NoInfo: 2/745 (0.3%). Certain keep: 739/745 (99.2%) ########################## YDR343C (1713bp = 571AA) has 117 hits (HXT6) Hexose transporter Spar (test2) non-orthologous hit at 82% f1652/1698 (97.3%) over 1706bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 89% f1713/1713 (100.0%) over 1713bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 87% f1712/1712 (100.0%) over 1712bp for offset 0 <== THIS IS REAL YDR343C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR343C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/746 (0.3%). Conflicting: 2/746 (0.3%). NoInfo: 2/746 (0.3%). Certain keep: 740/746 (99.2%) ########################## YDR345C (1704bp = 568AA) has 119 hits (HXT3) Low-affinity glucose transporter Spar (test2) non-orthologous hit at 93% f1509/1554 (97.1%) over 1555bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f775/775 (100.0%) over 775bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 90% f1541/1553 (99.2%) over 1556bp for offset 0 <== THIS IS REAL YDR345C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR345C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/747 (0.3%). Conflicting: 2/747 (0.3%). NoInfo: 2/747 (0.3%). Certain keep: 741/747 (99.2%) ########################## YDR346C (1446bp = 482AA) has 252 hits (SGI1) Spar (test2) orthologous hit at 88% f750/758 (98.9%) over 764bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f813/823 (98.8%) over 835bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f781/899 (86.9%) over 913bp for offset 1 Sbay (test3) Longest island has f98 at 79% over 759bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|______|_____|_____|_____|______|_____|_____|_____|_____|______|__| 98f 79% 759bp Sb450brk |==============================================>........> | YDR346C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR346C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/748 (0.3%). Conflicting: 2/748 (0.3%). NoInfo: 2/748 (0.3%). Certain keep: 742/748 (99.2%) ########################## YDR347W (966bp = 322AA) has 5 hits (MRP1) 37 kDa mitochondrial ribosomal protein Spar (test2) orthologous hit at 89% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f954/964 (99.0%) over 966bp for offset 0 <== THIS IS REAL YDR347W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR347W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/749 (0.3%). Conflicting: 2/749 (0.3%). NoInfo: 2/749 (0.3%). Certain keep: 743/749 (99.2%) ########################## YDR349C (1791bp = 597AA) has 6 hits (YPS7) GPI-anchored aspartic protease Spar (test2) orthologous hit at 88% f1757/1761 (99.8%) over 1762bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1779/1788 (99.5%) over 1791bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1725/1779 (97.0%) over 1789bp for offset 0 <== THIS IS REAL YDR349C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR349C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/750 (0.3%). Conflicting: 2/750 (0.3%). NoInfo: 2/750 (0.3%). Certain keep: 744/750 (99.2%) ########################## YDR350C (1836bp = 612AA) has 7 hits (TCM10) Product of gene unknown Spar (test2) orthologous hit at 87% f1769/1835 (96.4%) over 1836bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1737/1830 (94.9%) over 1836bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1715/1827 (93.9%) over 1836bp for offset 1 <== THIS IS REAL YDR350C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR350C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/751 (0.3%). Conflicting: 2/751 (0.3%). NoInfo: 2/751 (0.3%). Certain keep: 745/751 (99.2%) ########################## YDR351W (2595bp = 865AA) has 31 hits (SBE2) involved in bud growth Spar (test2) orthologous hit at 88% f2583/2592 (99.7%) over 2594bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2576/2591 (99.4%) over 2595bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1398/1401 (99.8%) over 1402bp for offset 0 <== THIS IS REAL YDR351W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR351W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/752 (0.3%). Conflicting: 2/752 (0.3%). NoInfo: 2/752 (0.3%). Certain keep: 746/752 (99.2%) ########################## YDR353W (960bp = 320AA) has 8 hits (TRR1) Thioredoxin reductase Spar (test2) orthologous hit at 93% f960/960 (100.0%) over 960bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f959/959 (100.0%) over 959bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f947/957 (99.0%) over 959bp for offset 0 <== THIS IS REAL YDR353W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR353W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/753 (0.3%). Conflicting: 2/753 (0.3%). NoInfo: 2/753 (0.3%). Certain keep: 747/753 (99.2%) ########################## YDR354W (1143bp = 381AA) has 6 hits (TRP4) anthranilate phosphoribosyl transferase Spar (test2) orthologous hit at 89% f1132/1141 (99.2%) over 1143bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1131/1142 (99.0%) over 1143bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f823/860 (95.7%) over 865bp for offset 0 <== THIS IS REAL YDR354W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR354W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/754 (0.3%). Conflicting: 2/754 (0.3%). NoInfo: 2/754 (0.3%). Certain keep: 748/754 (99.2%) ########################## YDR356W (2835bp = 945AA) has 357 hits (SPC110) component of the spindle pole bod..Da protein (142) Flanking ORFs are: YDR353W and YDR355C. YDR356W skipped ########################## YDR358W (1674bp = 558AA) has 18 hits (GGA1) Arf-binding protein Spar (test2) orthologous hit at 86% f1674/1674 (100.0%) over 1674bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1636/1666 (98.2%) over 1674bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1630/1668 (97.7%) over 1674bp for offset 0 <== THIS IS REAL YDR358W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR358W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/755 (0.3%). Conflicting: 2/755 (0.3%). NoInfo: 2/755 (0.3%). Certain keep: 749/755 (99.2%) ########################## YDR359C (2880bp = 960AA) has 60 hits (VID21) vacuolar import degradation Flanking ORFs are: YDR357C and YDR359C. YDR359C skipped ########################## YDR361C (852bp = 284AA) has 14 hits (BCP1) Hypothetical ORF Spar (test2) orthologous hit at 92% f852/852 (100.0%) over 852bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f846/851 (99.4%) over 852bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f843/851 (99.1%) over 852bp for offset 0 <== THIS IS REAL YDR361C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR361C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/756 (0.3%). Conflicting: 2/756 (0.3%). NoInfo: 2/756 (0.3%). Certain keep: 750/756 (99.2%) ########################## YDR362C (2019bp = 673AA) has 31 hits (TFC6) 91 kDa tau91 subunit of transcriptio..C (TFIIIC) (102) Spar (test2) orthologous hit at 90% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1593/2012 (79.2%) over 2019bp for offset 2 Smik (test3) Longest island has f99 at 84% over 1598bp <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1968/2004 (98.2%) over 2013bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 22k |___|___|____|___|____|___|____|___|____|___|____|___|___|____|___|____|___|____|___|____|| 96f 76% 423bp 99f 84% 1598bp Sm360full |=================>xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YDR362C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR362C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/757 (0.3%). Conflicting: 2/757 (0.3%). NoInfo: 2/757 (0.3%). Certain keep: 751/757 (99.2%) ########################## YDR363W (1371bp = 457AA) has 39 hits (ESC2) establishes silent chromatin Spar (test2) orthologous hit at 87% f1363/1368 (99.6%) over 1369bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1326/1365 (97.1%) over 1371bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1014/1242 (81.6%) over 1257bp for offset 0 Sbay (test3) Longest island has f99 at 75% over 957bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|_____|______|_____|______|______|_____|______|_____|______|____| 99f 75% 957bp Sb451full |.........|==============================================================>........>| YDR363W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR363W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/758 (0.3%). Conflicting: 2/758 (0.3%). NoInfo: 2/758 (0.3%). Certain keep: 752/758 (99.2%) ########################## YDR363W-A (270bp = 90AA) has 90 hits (SEM1) unknown function, similar to S. pombe Dss1 Spar (test2) orthologous hit at 93% f270/270 (100.0%) over 270bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f270/270 (100.0%) over 270bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f266/266 (100.0%) over 266bp for offset 0 <== THIS IS REAL YDR363W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR363W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/759 (0.3%). Conflicting: 2/759 (0.3%). NoInfo: 2/759 (0.3%). Certain keep: 753/759 (99.2%) ########################## YDR364C (1368bp = 456AA) has 12 hits (CDC40) Member of the beta transducin family Spar (test2) orthologous hit at 89% f1364/1367 (99.8%) over 1368bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1353/1364 (99.2%) over 1367bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1333/1364 (97.7%) over 1367bp for offset 0 <== THIS IS REAL YDR364C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR364C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/760 (0.3%). Conflicting: 2/760 (0.3%). NoInfo: 2/760 (0.3%). Certain keep: 754/760 (99.2%) ########################## YDR368W (939bp = 313AA) has 21 hits (YPR1) similar to aldo-keto reductase Spar (test2) orthologous hit at 89% f939/939 (100.0%) over 939bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f936/938 (99.8%) over 939bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f935/938 (99.7%) over 939bp for offset 0 <== THIS IS REAL YDR368W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR368W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/761 (0.3%). Conflicting: 2/761 (0.3%). NoInfo: 2/761 (0.3%). Certain keep: 755/761 (99.2%) ########################## YDR369C (2565bp = 855AA) has 21 hits (XRS2) DNA repair protein Spar (test2) orthologous hit at 79% f2417/2519 (96.0%) over 2532bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 64% f1728/2272 (76.1%) over 2348bp for offset 0 Smik (test3) Longest island has f93 at 72% over 1439bp <== THIS IS REAL Sbay (test2) orthologous hit at 70% f1220/1371 (89.0%) over 1391bp for offset 0 Sbay (test3) Longest island has f96 at 72% over 787bp <== THIS IS REAL 0 100 200300 400500 600700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k |__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|__| 93f 72% 1439bp Sm358brk |=================================================>...............................> | 96f 72% 787bp Sb452full |==========================>....................> | YDR369C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR369C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/762 (0.3%). Conflicting: 2/762 (0.3%). NoInfo: 2/762 (0.3%). Certain keep: 756/762 (99.2%) ########################## YDR371W (1536bp = 512AA) has 18 hits (CTS2) chitinase Spar (test2) orthologous hit at 88% f1518/1518 (100.0%) over 1518bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1514/1531 (98.9%) over 1536bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1474/1530 (96.3%) over 1536bp for offset 0 <== THIS IS REAL YDR371W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR371W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/763 (0.3%). Conflicting: 2/763 (0.3%). NoInfo: 2/763 (0.3%). Certain keep: 757/763 (99.2%) ########################## YDR372C (1038bp = 346AA) has 9 hits (VPS74) Spar (test2) orthologous hit at 92% f1035/1038 (99.7%) over 1038bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f892/900 (99.1%) over 903bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1031/1035 (99.6%) over 1038bp for offset 0 <== THIS IS REAL YDR372C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR372C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/764 (0.3%). Conflicting: 2/764 (0.3%). NoInfo: 2/764 (0.3%). Certain keep: 758/764 (99.2%) ########################## YDR373W (573bp = 191AA) has 7 hits (FRQ1) Product of gene unknown Spar (test2) orthologous hit at 91% f573/573 (100.0%) over 573bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f573/573 (100.0%) over 573bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f573/573 (100.0%) over 573bp for offset 0 <== THIS IS REAL YDR373W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR373W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/765 (0.3%). Conflicting: 2/765 (0.3%). NoInfo: 2/765 (0.3%). Certain keep: 759/765 (99.2%) ########################## YDR375C (1371bp = 457AA) has 10 hits (BCS1) Mitochondrial ATPase (AAA family) Spar (test2) orthologous hit at 90% f1371/1371 (100.0%) over 1371bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1371/1371 (100.0%) over 1371bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1214/1216 (99.8%) over 1217bp for offset 0 <== THIS IS REAL YDR375C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR375C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/766 (0.3%). Conflicting: 2/766 (0.3%). NoInfo: 2/766 (0.3%). Certain keep: 760/766 (99.2%) ########################## YDR376W (1482bp = 494AA) has 6 hits (ARH1) adrenodoxin oxidoreductase homolog Spar (test2) orthologous hit at 88% f876/876 (100.0%) over 876bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1461/1471 (99.3%) over 1474bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1454/1476 (98.5%) over 1481bp for offset 0 <== THIS IS REAL YDR376W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR376W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/767 (0.3%). Conflicting: 2/767 (0.3%). NoInfo: 2/767 (0.3%). Certain keep: 761/767 (99.2%) ########################## YDR377W (306bp = 102AA) has 4 hits (ATP17) ATP synthase subunit f Spar (test2) orthologous hit at 91% f306/306 (100.0%) over 306bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f301/305 (98.7%) over 306bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f306/306 (100.0%) over 306bp for offset 0 <== THIS IS REAL YDR377W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR377W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/768 (0.3%). Conflicting: 2/768 (0.3%). NoInfo: 2/768 (0.3%). Certain keep: 762/768 (99.2%) ########################## YDR378C (372bp = 124AA) has 6 hits (LSM6) Sm-like protein Spar (test2) orthologous hit at 87% f371/371 (100.0%) over 371bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f332/371 (89.5%) over 371bp for offset 1 Smik (test3) Longest island has f99 at 81% over 337bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f268/369 (72.6%) over 371bp for offset 0 Sbay (test3) Longest island has f100 at 83% over 265bp 0 100 200 300 372 |_______________________|_______________________|_______________________|_________________| 99f 81% 337bp Sm357full |........|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| 100f 83% 265bp Sb454full |..........................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YDR378C: kill: Sbay - keep: Spar Smik YDR378C - Conflicting. Kill (Sbay) and Keep (Spar Smik) Current total: Certain kills: 2/769 (0.3%). Conflicting: 3/769 (0.4%). NoInfo: 2/769 (0.3%). Certain keep: 762/769 (99.1%) ########################## YDR379W (3030bp = 1010AA) has 21 hits (RGA2) Contains a Rho-GAP domain and two L.. Rho-GAPs. (166) Spar (test2) orthologous hit at 88% f3018/3027 (99.7%) over 3030bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f59/69 (85.5%) over 70bp for offset 2 Smik (test3) Longest island has f100 at 81% over 59bp Sbay (test2) orthologous hit at 75% f2931/3006 (97.5%) over 3030bp for offset 0 <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 2k 33k |_|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|| 1100f 60% 10bp Sm357brk ||> | YDR379W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR379W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/770 (0.3%). Conflicting: 3/770 (0.4%). NoInfo: 2/770 (0.3%). Certain keep: 763/770 (99.1%) ########################## YDR380W (1908bp = 636AA) has 21 hits (ARO10) Spar (test2) orthologous hit at 89% f1907/1907 (100.0%) over 1907bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1635/1646 (99.3%) over 1649bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1891/1903 (99.4%) over 1906bp for offset 0 <== THIS IS REAL YDR380W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR380W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/771 (0.3%). Conflicting: 3/771 (0.4%). NoInfo: 2/771 (0.3%). Certain keep: 764/771 (99.1%) ########################## YDR382W (333bp = 111AA) has 80 hits (RPP2B) Ribosomal protein P2B (YP2beta) (L45) Spar (test2) orthologous hit at 97% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 96% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL YDR382W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR382W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/772 (0.3%). Conflicting: 3/772 (0.4%). NoInfo: 2/772 (0.3%). Certain keep: 765/772 (99.1%) ########################## YDR383C (759bp = 253AA) has 17 hits (NKP1) Hypothetical ORF Spar (test2) orthologous hit at 86% f730/755 (96.7%) over 756bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f738/745 (99.1%) over 745bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f402/406 (99.0%) over 407bp for offset 0 <== THIS IS REAL YDR383C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR383C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/773 (0.3%). Conflicting: 3/773 (0.4%). NoInfo: 2/773 (0.3%). Certain keep: 766/773 (99.1%) ########################## YDR385W (2529bp = 843AA) has 23 hits (EFT2) translation elongation factor 2 (EF-2) Spar (test2) orthologous hit at 96% f2529/2529 (100.0%) over 2529bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f890/890 (100.0%) over 890bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f1695/1703 (99.5%) over 1705bp for offset 0 <== THIS IS REAL YDR385W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR385W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/774 (0.3%). Conflicting: 3/774 (0.4%). NoInfo: 2/774 (0.3%). Certain keep: 767/774 (99.1%) ########################## YDR386W (1899bp = 633AA) has 7 hits (MUS81) involved in DNA repair, interacts with Rad54 Spar (test2) orthologous hit at 87% f1899/1899 (100.0%) over 1899bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1889/1897 (99.6%) over 1899bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1853/1892 (97.9%) over 1898bp for offset 0 <== THIS IS REAL YDR386W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR386W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/775 (0.3%). Conflicting: 3/775 (0.4%). NoInfo: 2/775 (0.3%). Certain keep: 768/775 (99.1%) ########################## YDR388W (1449bp = 483AA) has 175 hits (RVS167) (putative) cytoskeletal protein Spar (test2) orthologous hit at 91% f1078/1087 (99.2%) over 1088bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1088/1092 (99.6%) over 1093bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f583/723 (80.6%) over 724bp for offset 2 Sbay (test3) Longest island has f99 at 79% over 588bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|______|_____|_____|_____|_____|______|_____|_____|_____|_____|___| 99f 79% 588bp Sb456brk |........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | YDR388W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR388W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/776 (0.3%). Conflicting: 3/776 (0.4%). NoInfo: 2/776 (0.3%). Certain keep: 769/776 (99.1%) ########################## YDR389W (1965bp = 655AA) has 26 hits (SAC7) GTPase activating protein (GAP) for RHO1 Spar (test2) orthologous hit at 91% f1961/1964 (99.8%) over 1965bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1614/1962 (82.3%) over 1965bp for offset 2 Smik (test3) Longest island has f99 at 86% over 1629bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1957/1964 (99.6%) over 1965bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|___|____|____|___|____|___|____|___|____|____|___|____|___|____|____|__| 99f 86% 1629bp 100f 85% 337bp Sm351full |=========================================================================|xxxxxxxxxxxxxxx| YDR389W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR389W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/777 (0.3%). Conflicting: 3/777 (0.4%). NoInfo: 2/777 (0.3%). Certain keep: 770/777 (99.1%) ########################## YDR390C (1911bp = 637AA) has 25 hits (UBA2) similar to ubiquitin activating enzyme (E1) Spar (test2) orthologous hit at 88% f1911/1911 (100.0%) over 1911bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f1885/1905 (99.0%) over 1911bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1866/1902 (98.1%) over 1911bp for offset 0 <== THIS IS REAL YDR390C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR390C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/778 (0.3%). Conflicting: 3/778 (0.4%). NoInfo: 2/778 (0.3%). Certain keep: 771/778 (99.1%) ########################## YDR392W (1014bp = 338AA) has 21 hits (SPT3) transcription factor, member of the ..GA complex (118) Spar (test2) orthologous hit at 91% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL YDR392W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR392W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/779 (0.3%). Conflicting: 3/779 (0.4%). NoInfo: 2/779 (0.3%). Certain keep: 772/779 (99.1%) ########################## YDR393W (1371bp = 457AA) has 23 hits (SHE9) similar to Arabidopsis Cip1, lethal ..rexpressed (98) Spar (test2) orthologous hit at 89% f1365/1370 (99.6%) over 1371bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1365/1370 (99.6%) over 1371bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1138/1155 (98.5%) over 1159bp for offset 0 <== THIS IS REAL YDR393W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR393W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/780 (0.3%). Conflicting: 3/780 (0.4%). NoInfo: 2/780 (0.3%). Certain keep: 773/780 (99.1%) ########################## YDR394W (1287bp = 429AA) has 53 hits (RPT3) ATPase (AAA family) component of the..me complex (103) Spar (test2) orthologous hit at 94% f1287/1287 (100.0%) over 1287bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f663/1285 (51.6%) over 1287bp for offset 0 Smik (test3) Longest island has f100 at 91% over 663bp <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1287/1287 (100.0%) over 1287bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |_____|______|______|______|______|______|______|______|______|______|______|______|______| 100f 89% 409bp 100f 89% 213bp 100f 91% 663bp Sm350full |===========================|xxxxxxxxxxxxxx|oooooooooooooooooooooooooooooooooooooooooooooo| YDR394W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR394W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/781 (0.3%). Conflicting: 3/781 (0.4%). NoInfo: 2/781 (0.3%). Certain keep: 774/781 (99.1%) ########################## YDR395W (2835bp = 945AA) has 16 hits (SXM1) Sxm1p shares similarity with Cse1p h..ar protein (275) Spar (test2) orthologous hit at 91% f2835/2835 (100.0%) over 2835bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f279/279 (100.0%) over 279bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2833/2833 (100.0%) over 2833bp for offset 0 <== THIS IS REAL YDR395W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR395W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/782 (0.3%). Conflicting: 3/782 (0.4%). NoInfo: 2/782 (0.3%). Certain keep: 775/782 (99.1%) ########################## YDR398W (1932bp = 644AA) has 59 hits (UTP5) Protein required for cell viability Spar (test2) orthologous hit at 90% f1927/1929 (99.9%) over 1932bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f675/683 (98.8%) over 686bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1910/1928 (99.1%) over 1932bp for offset 0 <== THIS IS REAL YDR398W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR398W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/783 (0.3%). Conflicting: 3/783 (0.4%). NoInfo: 2/783 (0.3%). Certain keep: 776/783 (99.1%) ########################## YDR399W (666bp = 222AA) has 13 hits (HPT1) hypoxanthine guanine phosphoribosyltransferase Spar (test2) orthologous hit at 92% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL YDR399W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR399W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/784 (0.3%). Conflicting: 3/784 (0.4%). NoInfo: 2/784 (0.3%). Certain keep: 777/784 (99.1%) ########################## YDR400W (1137bp = 379AA) has 6 hits (URH1) uridine nucleosidase (uridine ribohyd..EC 3.2.2.3 (99) Spar (test2) orthologous hit at 88% f1067/1136 (93.9%) over 1137bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1046/1133 (92.3%) over 1137bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1015/1027 (98.8%) over 1028bp for offset 0 <== THIS IS REAL YDR400W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR400W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/785 (0.3%). Conflicting: 3/785 (0.4%). NoInfo: 2/785 (0.3%). Certain keep: 778/785 (99.1%) ########################## YDR402C (1470bp = 490AA) has 12 hits (DIT2) Cytochrome P450 56, Dit2p catalyzes ..e in vitro (147) Flanking ORFs are: YDR399W and YDR401W. YDR402C skipped ########################## YDR403W (1611bp = 537AA) has 11 hits (DIT1) first enzyme in dityrosine synthesis..porulation (212) Spar (test2) orthologous hit at 91% f1602/1609 (99.6%) over 1611bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f172/185 (93.0%) over 188bp for offset 0 Smik (test3) Longest island has f91 at 86% over 188bp Sbay (test2) orthologous hit at 83% f1046/1140 (91.8%) over 1143bp for offset 2 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 11k |____|_____|____|_____|____|_____|_____|____|_____|____|_____|_____|____|_____|____|_____|| 91f 86% 188Sm1424brk |==========| YDR403W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YDR403W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 2/786 (0.3%). Conflicting: 3/786 (0.4%). NoInfo: 2/786 (0.3%). Certain keep: 779/786 (99.1%) ########################## YDR404C (516bp = 172AA) has 4 hits (RPB7) dissociable subunit of RNA polymerase II Spar (test2) orthologous hit at 94% f516/516 (100.0%) over 516bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 92% f516/516 (100.0%) over 516bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f516/516 (100.0%) over 516bp for offset 0 <== THIS IS REAL YDR404C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR404C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/787 (0.3%). Conflicting: 3/787 (0.4%). NoInfo: 2/787 (0.3%). Certain keep: 780/787 (99.1%) ########################## YDR405W (792bp = 264AA) has 4 hits (MRP20) 263-amino acid mitochondrial ribosoma..l proteins (148) Spar (test2) orthologous hit at 89% f788/791 (99.6%) over 792bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f782/786 (99.5%) over 792bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f786/791 (99.4%) over 791bp for offset 0 <== THIS IS REAL YDR405W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR405W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/788 (0.3%). Conflicting: 3/788 (0.4%). NoInfo: 2/788 (0.3%). Certain keep: 781/788 (99.1%) ########################## YDR406W (4590bp = 1530AA) has 104 hits (PDR15) probable multidrug resistance transporter Spar (test2) orthologous hit at 89% f3578/3718 (96.2%) over 3727bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 73% f402/509 (79.0%) over 525bp for offset 1 Smik (test3) Longest island has f99 at 83% over 338bp <== THIS IS REAL Sbay (test2) orthologous hit at 70% f356/459 (77.6%) over 469bp for offset 0 Sbay (test3) Longest island has f95 at 77% over 310bp <== THIS IS REAL 01020304050607080901k1k1k1k1k1k1k1k1k1k2k2k2k2k2k22k2k2k2k3k3k3k3k3k3k3k3k3k3k4k4k4k4k4k4k4k ||_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_||_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_| 99f 83% 338bp Sm1354brk |..|xxxxxx> | 95f 77% 310bp Sb457brk |..|=====> | YDR406W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR406W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/789 (0.3%). Conflicting: 3/789 (0.4%). NoInfo: 2/789 (0.3%). Certain keep: 782/789 (99.1%) ########################## YDR407C (3870bp = 1290AA) has 26 hits (TRS120) Component of targeting complex (T..ne traffic (126) Spar (test2) orthologous hit at 90% f931/984 (94.6%) over 985bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1906/1915 (99.5%) over 1920bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3786/3860 (98.1%) over 3870bp for offset 0 <== THIS IS REAL YDR407C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR407C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/790 (0.3%). Conflicting: 3/790 (0.4%). NoInfo: 2/790 (0.3%). Certain keep: 783/790 (99.1%) ########################## YDR408C (645bp = 215AA) has 4 hits (ADE8) glycinamide ribotide transformylase Spar (test2) orthologous hit at 90% f645/645 (100.0%) over 645bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f645/645 (100.0%) over 645bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f641/641 (100.0%) over 641bp for offset 0 <== THIS IS REAL YDR408C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR408C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/791 (0.3%). Conflicting: 3/791 (0.4%). NoInfo: 2/791 (0.3%). Certain keep: 784/791 (99.1%) ########################## YDR409W (2715bp = 905AA) has 1025 hits (SIZ1) Spar (test2) orthologous hit at 85% f1190/1247 (95.4%) over 1265bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2036/2136 (95.3%) over 2152bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1646/1823 (90.3%) over 1852bp for offset 0 <== THIS IS REAL YDR409W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR409W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/792 (0.3%). Conflicting: 3/792 (0.4%). NoInfo: 2/792 (0.3%). Certain keep: 785/792 (99.1%) ########################## YDR410C (720bp = 240AA) has 10 hits (STE14) farnesyl cysteine-carboxyl methyltransferase Spar (test2) orthologous hit at 87% f713/718 (99.3%) over 719bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f719/719 (100.0%) over 719bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f692/718 (96.4%) over 720bp for offset 0 <== THIS IS REAL YDR410C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR410C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/793 (0.3%). Conflicting: 3/793 (0.4%). NoInfo: 2/793 (0.3%). Certain keep: 786/793 (99.1%) ########################## YDR414C (1089bp = 363AA) has 3 hits (ERD1) involved in rentention of lumenal ER proteins Spar (test2) orthologous hit at 87% f1089/1089 (100.0%) over 1089bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1080/1086 (99.4%) over 1089bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1070/1085 (98.6%) over 1089bp for offset 0 <== THIS IS REAL YDR414C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR414C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/794 (0.3%). Conflicting: 3/794 (0.4%). NoInfo: 2/794 (0.3%). Certain keep: 787/794 (99.1%) ########################## YDR416W (2580bp = 860AA) has 9 hits (SYF1) (putative) involved in cell cyle; sim..ooked neck (111) Spar (test2) orthologous hit at 87% f2565/2571 (99.8%) over 2572bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 76% f991/2020 (49.1%) over 2038bp for offset 1 Smik (test3) Longest island has f97 at 78% over 995bp <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2512/2566 (97.9%) over 2577bp for offset 1 <== THIS IS REAL 0 100200 300400 500600 700800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k |__|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__| 99f 79% 918bp 97f 78% 995bp Sm1293brk |===============================>....|oooooooooooooooooooooooooooooooooo> | YDR416W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR416W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/795 (0.3%). Conflicting: 3/795 (0.4%). NoInfo: 2/795 (0.3%). Certain keep: 788/795 (99.1%) ########################## YDR418W (498bp = 166AA) has 8 hits (RPL12B) Ribosomal protein L12B (L15B) (YL23) Flanking ORFs are: YDR415C and YDR417C. YDR418W skipped ########################## YDR419W (1899bp = 633AA) has 9 hits (RAD30) similar to E. coli DinB and S. cerevisiae REV1 Spar (test2) orthologous hit at 86% f113/122 (92.6%) over 123bp for offset 0 Spar (test3) Longest island has f100 at 88% over 113bp Smik (test2) non-orthologous hit at 84% f1221/1223 (99.8%) over 1224bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1879/1894 (99.2%) over 1897bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|___|____|____|____|___|____|____|____|___|____|____|____|___|____|____|____| 100f 100f 78% 9bp Sp232brk |====| | YDR419W: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YDR419W - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 2/796 (0.3%). Conflicting: 3/796 (0.4%). NoInfo: 2/796 (0.3%). Certain keep: 789/796 (99.1%) ########################## YDR420W (5409bp = 1803AA) has 96 hits (HKR1) Type 1 membrane protein with EF hand motif Spar (test2) orthologous hit at 79% f3176/3404 (93.3%) over 3443bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 68% f1528/3324 (46.0%) over 3388bp for offset 2 Smik (test3) Longest island has f99 at 77% over 1307bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1390/1541 (90.2%) over 1560bp for offset 2 <== THIS IS REAL 01023040560708901k11k1k11k1k11k1k22k2k22k2k22k2k23k3k33k3k33k3k33k4k44k4k44k4k44k4k55k5k555k ||_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||| 91f 62% 98f 73% 808bp 99f 77% 1307bp Sm645brk |............|===>...|oooooooooooo>.|xxxxxxxxxxxxxxxxxxxx|> YDR420W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR420W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/797 (0.3%). Conflicting: 3/797 (0.4%). NoInfo: 2/797 (0.3%). Certain keep: 790/797 (99.1%) ########################## YDR421W (2853bp = 951AA) has 20 hits (ARO80) Spar (test2) orthologous hit at 88% f2296/2296 (100.0%) over 2296bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2624/2829 (92.8%) over 2853bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1792/1879 (95.4%) over 1893bp for offset 1 <== THIS IS REAL YDR421W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR421W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/798 (0.3%). Conflicting: 3/798 (0.4%). NoInfo: 2/798 (0.3%). Certain keep: 791/798 (99.1%) ########################## YDR422C (2592bp = 864AA) has 10 hits (SIP1) SNF1 protein kinase substrate Spar (test2) orthologous hit at 88% f2463/2586 (95.2%) over 2588bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2473/2580 (95.9%) over 2591bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f1123/1145 (98.1%) over 1150bp for offset 0 <== THIS IS REAL YDR422C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR422C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/799 (0.3%). Conflicting: 3/799 (0.4%). NoInfo: 2/799 (0.3%). Certain keep: 792/799 (99.1%) ########################## YDR423C (1230bp = 410AA) has 10 hits (CAD1) basic leucine zipper transcription factor Spar (test2) orthologous hit at 78% f855/859 (99.5%) over 860bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 66% f779/910 (85.6%) over 925bp for offset 0 Smik (test3) Longest island has f93 at 68% over 719bp <== THIS IS REAL Sbay (test2) orthologous hit at 66% f202/303 (66.7%) over 306bp for offset 1 Sbay (test3) Longest island has f96 at 71% over 211bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|_______|______|______|_______|______|______|_______|______|______|__| 93f 68% 719bp Sm645full |...............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> 96f 71% 211bp Sb460full |==============>......> | YDR423C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDR423C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 2/800 (0.2%). Conflicting: 3/800 (0.4%). NoInfo: 2/800 (0.2%). Certain keep: 793/800 (99.1%) ########################## YDR427W (1182bp = 394AA) has 23 hits (RPN9) Subunit of the regulatory particle o..proteasome (96) Spar (test2) orthologous hit at 92% f1180/1180 (100.0%) over 1180bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1180/1180 (100.0%) over 1180bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1177/1180 (99.7%) over 1181bp for offset 0 <== THIS IS REAL YDR427W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR427W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/801 (0.2%). Conflicting: 3/801 (0.4%). NoInfo: 2/801 (0.2%). Certain keep: 794/801 (99.1%) ########################## YDR429C (825bp = 275AA) has 23 hits (TIF35) translation initiation factor eIF3 subunit Spar (test2) orthologous hit at 94% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL YDR429C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR429C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/802 (0.2%). Conflicting: 3/802 (0.4%). NoInfo: 2/802 (0.2%). Certain keep: 795/802 (99.1%) ########################## YDR430C (2970bp = 990AA) has 16 hits (CYM1) Hypothetical ORF Flanking ORFs are: YDR428C and YDR430C. YDR430C skipped ########################## YDR432W (1245bp = 415AA) has 41 hits (NPL3) nuclear shuttling protein with an RN..tion motif (99) Flanking ORFs are: YDR428C and YDR430C. YDR432W skipped ########################## YDR433W (441bp = 147AA) has 41 hits (KRE22) Hypothetical ORF Flanking ORFs are: YDR428C and YDR430C. YDR433W skipped ########################## YDR434W (1605bp = 535AA) has 15 hits (GPI17) YDR434W Spar (test2) orthologous hit at 90% f1583/1601 (98.9%) over 1605bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1605/1605 (100.0%) over 1605bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1581/1598 (98.9%) over 1604bp for offset 0 <== THIS IS REAL YDR434W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR434W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/803 (0.2%). Conflicting: 3/803 (0.4%). NoInfo: 2/803 (0.2%). Certain keep: 796/803 (99.1%) ########################## YDR435C (987bp = 329AA) has 5 hits (PPM1) carboxy methyl transferase for protein..ic subunit (113) Spar (test2) orthologous hit at 87% f987/987 (100.0%) over 987bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f985/985 (100.0%) over 985bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f967/983 (98.4%) over 987bp for offset 0 <== THIS IS REAL YDR435C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR435C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/804 (0.2%). Conflicting: 3/804 (0.4%). NoInfo: 2/804 (0.2%). Certain keep: 797/804 (99.1%) ########################## YDR436W (2133bp = 711AA) has 44 hits (PPZ2) serine-threonine phosphatase Z Spar (test2) orthologous hit at 90% f2130/2130 (100.0%) over 2133bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1868/2081 (89.8%) over 2107bp for offset 0 Smik (test3) Longest island has f98 at 84% over 1675bp <== THIS IS REAL Sbay (test2) orthologous hit at 85% f285/285 (100.0%) over 285bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k2k |___|___|___|___|____|___|___|___|___|____|___|___|___|____|___|___|___|___|____|___|___|_| 98f 84% 1675bp Sm645full |..................|=====================================================================|> YDR436W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR436W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/805 (0.2%). Conflicting: 3/805 (0.4%). NoInfo: 2/805 (0.2%). Certain keep: 798/805 (99.1%) ########################## YDR439W (1044bp = 348AA) has 20 hits (LRS4) involved in rDNA silencing Spar (test2) orthologous hit at 86% f1040/1041 (99.9%) over 1044bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1014/1041 (97.4%) over 1044bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 67% f531/607 (87.5%) over 624bp for offset 0 Sbay (test3) Longest island has f88 at 71% over 512bp Sbay (test2) orthologous hit at 78% f340/340 (100.0%) over 340bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|________|_______|________|________|_______|________|_______|________|________|___| 88f 71% 512bp Sb465full |===========================================>.........> | YDR439W: kill: Sbay - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR439W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/806 (0.2%). Conflicting: 3/806 (0.4%). NoInfo: 2/806 (0.2%). Certain keep: 799/806 (99.1%) ########################## YDR440W (1749bp = 583AA) has 25 hits (DOT1) involved in meiosis and transcriptio.. silencing (93) Spar (test2) orthologous hit at 87% f1733/1747 (99.2%) over 1749bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1697/1743 (97.4%) over 1749bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1335/1440 (92.7%) over 1457bp for offset 0 <== THIS IS REAL YDR440W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR440W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/807 (0.2%). Conflicting: 3/807 (0.4%). NoInfo: 2/807 (0.2%). Certain keep: 800/807 (99.1%) ########################## YDR441C (546bp = 182AA) has 6 hits (APT2) Adenine Phosphoribosyltransferase Spar (test2) orthologous hit at 87% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f543/545 (99.6%) over 546bp for offset 0 <== THIS IS REAL YDR441C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR441C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/808 (0.2%). Conflicting: 3/808 (0.4%). NoInfo: 2/808 (0.2%). Certain keep: 801/808 (99.1%) ########################## YDR443C (4263bp = 1421AA) has 242 hits (SSN2) transcription factor Flanking ORFs are: YDR440W and YDR442W. YDR443C skipped ########################## YDR446W (909bp = 303AA) has 5 hits (ECM11) (putative) involved in cell wall biogenesis Spar (test2) orthologous hit at 88% f900/905 (99.4%) over 909bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f870/904 (96.2%) over 909bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f777/820 (94.8%) over 824bp for offset 2 <== THIS IS REAL YDR446W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR446W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/809 (0.2%). Conflicting: 3/809 (0.4%). NoInfo: 2/809 (0.2%). Certain keep: 802/809 (99.1%) ########################## YDR448W (1305bp = 435AA) has 8 hits (ADA2) transcription factor, member of ADA a..)complexes (157) Spar (test2) orthologous hit at 90% f1305/1305 (100.0%) over 1305bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1305/1305 (100.0%) over 1305bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1305/1305 (100.0%) over 1305bp for offset 0 <== THIS IS REAL YDR448W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR448W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/810 (0.2%). Conflicting: 3/810 (0.4%). NoInfo: 2/810 (0.2%). Certain keep: 803/810 (99.1%) ########################## YDR449C (1323bp = 441AA) has 29 hits (UTP6) Protein required for cell viability Spar (test2) orthologous hit at 90% f1323/1323 (100.0%) over 1323bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1323/1323 (100.0%) over 1323bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1319/1322 (99.8%) over 1323bp for offset 0 <== THIS IS REAL YDR449C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR449C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/811 (0.2%). Conflicting: 3/811 (0.4%). NoInfo: 2/811 (0.2%). Certain keep: 804/811 (99.1%) ########################## YDR451C (1062bp = 354AA) has 12 hits (YHP1) Spar (test2) orthologous hit at 87% f1061/1061 (100.0%) over 1061bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f815/847 (96.2%) over 849bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1050/1061 (99.0%) over 1062bp for offset 0 <== THIS IS REAL YDR451C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR451C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/812 (0.2%). Conflicting: 3/812 (0.4%). NoInfo: 2/812 (0.2%). Certain keep: 805/812 (99.1%) ########################## YDR452W (2025bp = 675AA) has 102 hits (PPN1) vacuolar polyphosphatase Spar (test2) orthologous hit at 89% f2014/2022 (99.6%) over 2025bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2007/2021 (99.3%) over 2025bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1974/2014 (98.0%) over 2025bp for offset 0 <== THIS IS REAL YDR452W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR452W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/813 (0.2%). Conflicting: 3/813 (0.4%). NoInfo: 2/813 (0.2%). Certain keep: 806/813 (99.1%) ########################## YDR453C (591bp = 197AA) has 8 hits (TSA2) Hypothetical ORF Spar (test2) orthologous hit at 89% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f279/585 (47.7%) over 590bp for offset 2 Smik (test3) Longest island has f100 at 81% over 182bp Sbay (test2) orthologous hit at 84% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 591 |______________|______________|______________|______________|_______________|_____________| 100f 84% 73b100f 87% 176bp 100f 81% 182bp 100f 82% 103bp Sm648full |==========>|xxxxxxxxxxxxxxxxxxxxxxxxx|===========================|xxxxxxxxxxxxxxx>......>| YDR453C: kill: Smik - keep: Spar Sbay YDR453C - Conflicting. Kill (Smik) and Keep (Spar Sbay) Current total: Certain kills: 2/814 (0.2%). Conflicting: 4/814 (0.5%). NoInfo: 2/814 (0.2%). Certain keep: 806/814 (99.0%) ########################## YDR454C (564bp = 188AA) has 8 hits (GUK1) guanylate kinase Spar (test2) orthologous hit at 90% f564/564 (100.0%) over 564bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f564/564 (100.0%) over 564bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f564/564 (100.0%) over 564bp for offset 0 <== THIS IS REAL YDR454C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR454C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/815 (0.2%). Conflicting: 4/815 (0.5%). NoInfo: 2/815 (0.2%). Certain keep: 807/815 (99.0%) ########################## YDR456W (1902bp = 634AA) has 8 hits (NHX1) Na+/H+ exchanger Flanking ORFs are: YDR453C and YDR455C. YDR456W skipped ########################## YDR457W (9807bp = 3269AA) has 83 hits (TOM1) hect-domain-containing protein, con..ar to Rsp5 (118) Spar (test2) orthologous hit at 90% f9071/9088 (99.8%) over 9094bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f5821/9797 (59.4%) over 9807bp for offset 0 Smik (test3) Longest island has f99 at 86% over 5856bp <== THIS IS REAL Sbay (test2) orthologous hit at 83% f9717/9783 (99.3%) over 9807bp for offset 0 <== THIS IS REAL 1234567891111111112222222223333333334444444445555555555666666666777777777888888888999999999k ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 99f 86% 5856bp 100f 86% 3961bp Sm648full |====================================================|oooooooooooooooooooooooooooooooooooo| YDR457W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR457W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/816 (0.2%). Conflicting: 4/816 (0.5%). NoInfo: 2/816 (0.2%). Certain keep: 808/816 (99.0%) ########################## YDR460W (966bp = 322AA) has 37 hits (TFB3) TFIIH subunit Tfb3 , contains ring fi..AK subunit (124) Spar (test2) orthologous hit at 92% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f962/965 (99.7%) over 966bp for offset 0 <== THIS IS REAL YDR460W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR460W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/817 (0.2%). Conflicting: 4/817 (0.5%). NoInfo: 2/817 (0.2%). Certain keep: 809/817 (99.0%) ########################## YDR461W (111bp = 37AA) has 19 hits (MFA1) a-factor mating pheromone precursor Spar (test2) orthologous hit at 92% f111/111 (100.0%) over 111bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f111/111 (100.0%) over 111bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f105/110 (95.5%) over 111bp for offset 0 <== THIS IS REAL YDR461W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR461W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/818 (0.2%). Conflicting: 4/818 (0.5%). NoInfo: 2/818 (0.2%). Certain keep: 810/818 (99.0%) ########################## YDR462W (444bp = 148AA) has 4 hits (MRPL28) Mitochondrial ribosomal protein MRPL28 (YmL28) Spar (test2) orthologous hit at 89% f444/444 (100.0%) over 444bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f441/443 (99.5%) over 444bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f444/444 (100.0%) over 444bp for offset 0 <== THIS IS REAL YDR462W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR462W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/819 (0.2%). Conflicting: 4/819 (0.5%). NoInfo: 2/819 (0.2%). Certain keep: 811/819 (99.0%) ########################## YDR463W (1734bp = 578AA) has 10 hits (STP1) Nuclear-localized protein containing..ger motifs (99) Spar (test2) orthologous hit at 87% f1618/1708 (94.7%) over 1712bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1187/1320 (89.9%) over 1327bp for offset 1 Smik (test3) Longest island has f99 at 82% over 1125bp <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1113/1225 (90.9%) over 1234bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k1k |____|____|____|____|____|_____|____|____|____|____|_____|____|____|____|____|_____|____|_| 99f 82% 1125bp Sm648full |.......|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooo>.> | YDR463W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR463W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/820 (0.2%). Conflicting: 4/820 (0.5%). NoInfo: 2/820 (0.2%). Certain keep: 812/820 (99.0%) ########################## YDR464W (4308bp = 1436AA) has 95 hits (SPP41) negative regulator of prp genes Spar (test2) orthologous hit at 82% f3625/3806 (95.2%) over 3839bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f3061/3277 (93.4%) over 3311bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1288/1380 (93.3%) over 1396bp for offset 0 <== THIS IS REAL YDR464W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR464W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/821 (0.2%). Conflicting: 4/821 (0.5%). NoInfo: 2/821 (0.2%). Certain keep: 813/821 (99.0%) ########################## YDR465C (1239bp = 413AA) has 9 hits (RMT2) Protein arginine methyltransferase Spar (test2) orthologous hit at 90% f1233/1235 (99.8%) over 1239bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1206/1227 (98.3%) over 1239bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1190/1227 (97.0%) over 1238bp for offset 0 <== THIS IS REAL YDR465C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR465C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/822 (0.2%). Conflicting: 4/822 (0.5%). NoInfo: 2/822 (0.2%). Certain keep: 814/822 (99.0%) ########################## YDR468C (675bp = 225AA) has 12 hits (TLG1) tSNARE that affects a Late Golgi compartment Spar (test2) orthologous hit at 90% f672/674 (99.7%) over 675bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f666/672 (99.1%) over 673bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f352/352 (100.0%) over 352bp for offset 0 <== THIS IS REAL YDR468C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR468C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/823 (0.2%). Conflicting: 4/823 (0.5%). NoInfo: 2/823 (0.2%). Certain keep: 815/823 (99.0%) ########################## YDR469W (528bp = 176AA) has 21 hits (SDC1) Spar (test2) orthologous hit at 87% f518/526 (98.5%) over 528bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f509/522 (97.5%) over 528bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f507/526 (96.4%) over 528bp for offset 0 <== THIS IS REAL YDR469W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR469W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/824 (0.2%). Conflicting: 4/824 (0.5%). NoInfo: 2/824 (0.2%). Certain keep: 816/824 (99.0%) ########################## YDR470C (1509bp = 503AA) has 19 hits (UGO1) outer membrane protein required for ..ial fusion (104) Spar (test2) orthologous hit at 89% f1508/1509 (99.9%) over 1509bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1499/1503 (99.7%) over 1509bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f989/991 (99.8%) over 991bp for offset 0 <== THIS IS REAL YDR470C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR470C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/825 (0.2%). Conflicting: 4/825 (0.5%). NoInfo: 2/825 (0.2%). Certain keep: 817/825 (99.0%) ########################## YDR472W (852bp = 284AA) has 5 hits (TRS31) Component of targeting complex (TRAPP..ne traffic (122) Spar (test2) orthologous hit at 87% f852/852 (100.0%) over 852bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f847/851 (99.5%) over 852bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f473/541 (87.4%) over 544bp for offset 1 Sbay (test3) Longest island has f99 at 82% over 471bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 852 |_________|__________|_________|__________|_________|__________|_________|__________|_____| 99f 82% 471bp Sb466full |........|oooooooooooooooooooooooooooooooooooooooooooooooo|> YDR472W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR472W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/826 (0.2%). Conflicting: 4/826 (0.5%). NoInfo: 2/826 (0.2%). Certain keep: 818/826 (99.0%) ########################## YDR473C (1410bp = 470AA) has 124 hits (PRP3) snRNP from U4/U6 and U5 snRNPs Spar (test2) orthologous hit at 87% f1384/1405 (98.5%) over 1410bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1351/1403 (96.3%) over 1410bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f809/815 (99.3%) over 819bp for offset 0 <== THIS IS REAL YDR473C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR473C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/827 (0.2%). Conflicting: 4/827 (0.5%). NoInfo: 2/827 (0.2%). Certain keep: 819/827 (99.0%) ########################## YDR477W (1902bp = 634AA) has 84 hits (SNF1) protein serine/threonine kinase Spar (test2) orthologous hit at 92% f1902/1902 (100.0%) over 1902bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1836/1897 (96.8%) over 1902bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1874/1896 (98.8%) over 1902bp for offset 0 <== THIS IS REAL YDR477W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR477W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/828 (0.2%). Conflicting: 4/828 (0.5%). NoInfo: 2/828 (0.2%). Certain keep: 820/828 (99.0%) ########################## YDR478W (597bp = 199AA) has 6 hits (SNM1) RNase MRP (Mitochondrial RNA Processin.. component (100) Spar (test2) orthologous hit at 85% f596/597 (99.8%) over 597bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f577/592 (97.5%) over 595bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 67% f455/488 (93.2%) over 492bp for offset 0 <== THIS IS REAL YDR478W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR478W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/829 (0.2%). Conflicting: 4/829 (0.5%). NoInfo: 2/829 (0.2%). Certain keep: 821/829 (99.0%) ########################## YDR480W (972bp = 324AA) has 5 hits (DIG2) MAP kinase-associated protein Spar (test2) orthologous hit at 87% f972/972 (100.0%) over 972bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f963/968 (99.5%) over 972bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f849/909 (93.4%) over 924bp for offset 2 <== THIS IS REAL YDR480W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR480W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/830 (0.2%). Conflicting: 4/830 (0.5%). NoInfo: 2/830 (0.2%). Certain keep: 822/830 (99.0%) ########################## YDR481C (1701bp = 567AA) has 6 hits (PHO8) repressible alkaline phosphatase Spar (test2) orthologous hit at 89% f1701/1701 (100.0%) over 1701bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1701/1701 (100.0%) over 1701bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1683/1695 (99.3%) over 1701bp for offset 0 <== THIS IS REAL YDR481C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR481C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/831 (0.2%). Conflicting: 4/831 (0.5%). NoInfo: 2/831 (0.2%). Certain keep: 823/831 (99.0%) ########################## YDR482C (408bp = 136AA) has 7 hits (CWC21) YDR482C Spar (test2) orthologous hit at 93% f408/408 (100.0%) over 408bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f407/408 (99.8%) over 408bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f374/397 (94.2%) over 401bp for offset 0 <== THIS IS REAL YDR482C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR482C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/832 (0.2%). Conflicting: 4/832 (0.5%). NoInfo: 2/832 (0.2%). Certain keep: 824/832 (99.0%) ########################## YDR483W (1329bp = 443AA) has 41 hits (KRE2) alpha-1,2-mannosyltransferase Spar (test2) orthologous hit at 89% f1322/1328 (99.5%) over 1329bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1288/1322 (97.4%) over 1329bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1320/1327 (99.5%) over 1329bp for offset 0 <== THIS IS REAL YDR483W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR483W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/833 (0.2%). Conflicting: 4/833 (0.5%). NoInfo: 2/833 (0.2%). Certain keep: 825/833 (99.0%) ########################## YDR484W (1926bp = 642AA) has 31 hits (SAC2) involved in localization of actin and chitin Spar (test2) orthologous hit at 89% f1926/1926 (100.0%) over 1926bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1912/1923 (99.4%) over 1926bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1907/1918 (99.4%) over 1926bp for offset 0 <== THIS IS REAL YDR484W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR484W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/834 (0.2%). Conflicting: 4/834 (0.5%). NoInfo: 2/834 (0.2%). Certain keep: 826/834 (99.0%) ########################## YDR485C (2433bp = 811AA) has 278 hits (VPS72) Spar (test2) orthologous hit at 80% f2019/2212 (91.3%) over 2228bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 65% f1604/2135 (75.1%) over 2197bp for offset 0 Smik (test3) Longest island has f96 at 75% over 1291bp <== THIS IS REAL Sbay (test2) orthologous hit at 64% f1103/1373 (80.3%) over 1412bp for offset 0 Sbay (test3) Longest island has f92 at 71% over 849bp <== THIS IS REAL 0 100 200 300400 500 600700 800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k2k |__|___|___|__|___|___|__|___|___|__|___|___|___|__|___|___|__|___|___|__|___|___|___|__|_| 96f 75% 1291bp Sm650full |...................................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|x> 92f 71% 849bp Sb467full |............|===============================>......> | YDR485C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR485C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/835 (0.2%). Conflicting: 4/835 (0.5%). NoInfo: 2/835 (0.2%). Certain keep: 827/835 (99.0%) ########################## YDR486C (789bp = 263AA) has 10 hits (VPS60) vacuolar protein sorting (putative) Spar (test2) orthologous hit at 89% f722/770 (93.8%) over 772bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 86% f723/767 (94.3%) over 774bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f711/764 (93.1%) over 771bp for offset 0 <== THIS IS REAL YDR486C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR486C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/836 (0.2%). Conflicting: 4/836 (0.5%). NoInfo: 2/836 (0.2%). Certain keep: 828/836 (99.0%) ########################## YDR487C (627bp = 209AA) has 4 hits (RIB3) 3,4-dihydroxy-2-butanone 4-phosphate synthase Spar (test2) orthologous hit at 91% f627/627 (100.0%) over 627bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f627/627 (100.0%) over 627bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f627/627 (100.0%) over 627bp for offset 0 <== THIS IS REAL YDR487C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR487C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/837 (0.2%). Conflicting: 4/837 (0.5%). NoInfo: 2/837 (0.2%). Certain keep: 829/837 (99.0%) ########################## YDR488C (1602bp = 534AA) has 9 hits (PAC11) similar to rat dynein intermediate chain Spar (test2) orthologous hit at 80% f1311/1436 (91.3%) over 1451bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1324/1346 (98.4%) over 1359bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f798/1233 (64.7%) over 1252bp for offset 0 Sbay (test3) Longest island has f93 at 71% over 842bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 11k |____|_____|____|_____|_____|____|_____|____|_____|_____|____|_____|_____|____|_____|____|| 95f 70% 421bp 93f 71% 842bp Sb467full ||oooooooooooooooooooooo>==============================================|> YDR488C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR488C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/838 (0.2%). Conflicting: 4/838 (0.5%). NoInfo: 2/838 (0.2%). Certain keep: 830/838 (99.0%) ########################## YDR490C (2301bp = 767AA) has 52 hits (PKH1) Ser/Thr protein kinase Spar (test2) orthologous hit at 86% f2294/2298 (99.8%) over 2301bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1631/1671 (97.6%) over 1679bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2272/2290 (99.2%) over 2301bp for offset 0 <== THIS IS REAL YDR490C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR490C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/839 (0.2%). Conflicting: 4/839 (0.5%). NoInfo: 2/839 (0.2%). Certain keep: 831/839 (99.0%) ########################## YDR494W (867bp = 289AA) has 8 hits (RSM28) Hypothetical ORF Spar (test2) orthologous hit at 89% f797/813 (98.0%) over 816bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 79% f779/804 (96.9%) over 816bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 63% f499/778 (64.1%) over 803bp for offset 1 Sbay (test3) Longest island has f98 at 77% over 364bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 867 |_________|_________|__________|_________|_________|__________|_________|__________|______| 98f 77% 364bp Sb467full |................................................|ooooooooooooooooooooooooooooooooooooo> | YDR494W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR494W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/840 (0.2%). Conflicting: 4/840 (0.5%). NoInfo: 2/840 (0.2%). Certain keep: 832/840 (99.0%) ########################## YDR495C (3036bp = 1012AA) has 87 hits (VPS3) vacuolar protein targeting protein Spar (test2) orthologous hit at 87% f3016/3033 (99.4%) over 3036bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2959/3025 (97.8%) over 3036bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2810/2975 (94.5%) over 2996bp for offset 0 <== THIS IS REAL YDR495C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR495C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/841 (0.2%). Conflicting: 4/841 (0.5%). NoInfo: 2/841 (0.2%). Certain keep: 833/841 (99.0%) ########################## YDR496C (1971bp = 657AA) has 96 hits (PUF6) YDR496C Spar (test2) orthologous hit at 90% f1959/1966 (99.6%) over 1970bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1925/1961 (98.2%) over 1970bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1170/1194 (98.0%) over 1196bp for offset 0 <== THIS IS REAL YDR496C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR496C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/842 (0.2%). Conflicting: 4/842 (0.5%). NoInfo: 2/842 (0.2%). Certain keep: 834/842 (99.0%) ########################## YDR497C (1755bp = 585AA) has 10 hits (ITR1) myo-inositol transporter Spar (test2) orthologous hit at 91% f1749/1752 (99.8%) over 1753bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1749/1753 (99.8%) over 1754bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1660/1677 (99.0%) over 1682bp for offset 0 <== THIS IS REAL YDR497C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR497C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/843 (0.2%). Conflicting: 4/843 (0.5%). NoInfo: 2/843 (0.2%). Certain keep: 835/843 (99.1%) ########################## YDR498C (1152bp = 384AA) has 11 hits (SEC20) membrane glycoprotein, sorted by HD..val system (99) Spar (test2) orthologous hit at 88% f1152/1152 (100.0%) over 1152bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1136/1147 (99.0%) over 1152bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f597/612 (97.5%) over 617bp for offset 0 <== THIS IS REAL YDR498C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR498C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/844 (0.2%). Conflicting: 4/844 (0.5%). NoInfo: 2/844 (0.2%). Certain keep: 836/844 (99.1%) ########################## YDR499W (2244bp = 748AA) has 30 hits (LCD1) required for the DNA integrity check..(putative) (140) Spar (test2) orthologous hit at 89% f2237/2241 (99.8%) over 2244bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2220/2240 (99.1%) over 2243bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2199/2219 (99.1%) over 2225bp for offset 0 <== THIS IS REAL YDR499W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR499W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/845 (0.2%). Conflicting: 4/845 (0.5%). NoInfo: 2/845 (0.2%). Certain keep: 837/845 (99.1%) ########################## YDR501W (1566bp = 522AA) has 12 hits (PLM2) PLasmid Maintenance Spar (test2) orthologous hit at 86% f1557/1564 (99.6%) over 1566bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1529/1560 (98.0%) over 1566bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f955/967 (98.8%) over 969bp for offset 0 <== THIS IS REAL YDR501W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR501W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/846 (0.2%). Conflicting: 4/846 (0.5%). NoInfo: 2/846 (0.2%). Certain keep: 838/846 (99.1%) ########################## YDR502C (1155bp = 385AA) has 8 hits (SAM2) S-adenosylmethionine synthetase Spar (test2) orthologous hit at 94% f1155/1155 (100.0%) over 1155bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1154/1154 (100.0%) over 1154bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1150/1154 (99.7%) over 1155bp for offset 0 <== THIS IS REAL YDR502C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR502C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/847 (0.2%). Conflicting: 4/847 (0.5%). NoInfo: 2/847 (0.2%). Certain keep: 839/847 (99.1%) ########################## YDR503C (825bp = 275AA) has 4 hits (LPP1) Lipid phosphate phosphatase Spar (test2) orthologous hit at 89% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL YDR503C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR503C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/848 (0.2%). Conflicting: 4/848 (0.5%). NoInfo: 2/848 (0.2%). Certain keep: 840/848 (99.1%) ########################## YDR505C (2526bp = 842AA) has 154 hits (PSP1) high-copy suppressor of cdc17 DNA p.. mutations (105) Spar (test2) orthologous hit at 86% f1524/1578 (96.6%) over 1585bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1623/1839 (88.3%) over 1869bp for offset 0 Smik (test3) Longest island has f99 at 84% over 1462bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1457/1469 (99.2%) over 1470bp for offset 0 <== THIS IS REAL 0 100 200300 400500 600700 800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 22k |__|___|__|___|__|___|__|___|___|__|___|__|___|__|___|___|__|___|__|___|__|___|__|___|___|| 99f 84% 1462bp Sm650full |..............|===================================================| YDR505C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR505C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/849 (0.2%). Conflicting: 4/849 (0.5%). NoInfo: 2/849 (0.2%). Certain keep: 841/849 (99.1%) ########################## YDR507C (3429bp = 1143AA) has 220 hits (GIN4) putative serine/threonine kinase Spar (test2) orthologous hit at 89% f2944/2951 (99.8%) over 2952bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2899/2933 (98.8%) over 2939bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f2861/2977 (96.1%) over 2992bp for offset 1 <== THIS IS REAL YDR507C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR507C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/850 (0.2%). Conflicting: 4/850 (0.5%). NoInfo: 2/850 (0.2%). Certain keep: 842/850 (99.1%) ########################## YDR508C (1992bp = 664AA) has 55 hits (GNP1) high-affinity glutamine permease Flanking ORFs are: YDR506C and YDR508C. YDR508C skipped ########################## YDR510W (306bp = 102AA) has 4 hits (SMT3) ubiquitin-like protein Spar (test2) orthologous hit at 92% f306/306 (100.0%) over 306bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f306/306 (100.0%) over 306bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f306/306 (100.0%) over 306bp for offset 0 <== THIS IS REAL YDR510W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR510W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/851 (0.2%). Conflicting: 4/851 (0.5%). NoInfo: 2/851 (0.2%). Certain keep: 843/851 (99.1%) ########################## YDR511W (402bp = 134AA) has 6 hits (ACN9) Spar (test2) orthologous hit at 88% f402/402 (100.0%) over 402bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f402/402 (100.0%) over 402bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f396/401 (98.8%) over 402bp for offset 0 <== THIS IS REAL YDR511W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR511W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/852 (0.2%). Conflicting: 4/852 (0.5%). NoInfo: 2/852 (0.2%). Certain keep: 844/852 (99.1%) ########################## YDR513W (432bp = 144AA) has 10 hits (TTR1) Glutaredoxin (thioltransferase) (glut..reductase) (98) Flanking ORFs are: YDR510W and YDR512C. YDR513W skipped ########################## YDR515W (1344bp = 448AA) has 68 hits (SLF1) RNA binding protein with La motif Spar (test2) orthologous hit at 77% f885/1025 (86.3%) over 1047bp for offset 0 Spar (test3) Longest island has f97 at 86% over 778bp <== THIS IS REAL Smik (test2) orthologous hit at 77% f751/789 (95.2%) over 799bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 67% f864/1042 (82.9%) over 1074bp for offset 2 Sbay (test3) Longest island has f94 at 74% over 771bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|______|_____|______|______|_____|______|______|_____|______|______|______|__| 97f 86% 778bp Sp348full |...................|==================================================|> 94f 74% 771bp Sb469full |....................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YDR515W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR515W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/853 (0.2%). Conflicting: 4/853 (0.5%). NoInfo: 2/853 (0.2%). Certain keep: 845/853 (99.1%) ########################## YDR517W (1119bp = 373AA) has 6 hits (GRH1) Yeast homologue of mammalian GRASP pr..apparatus. (126) Spar (test2) orthologous hit at 88% f1110/1113 (99.7%) over 1119bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1108/1113 (99.6%) over 1119bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f879/881 (99.8%) over 881bp for offset 0 <== THIS IS REAL YDR517W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR517W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/854 (0.2%). Conflicting: 4/854 (0.5%). NoInfo: 2/854 (0.2%). Certain keep: 846/854 (99.1%) ########################## YDR518W (1554bp = 518AA) has 14 hits (EUG1) Protein disulfide isomerase homolog Spar (test2) orthologous hit at 90% f1541/1551 (99.4%) over 1554bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1503/1513 (99.3%) over 1516bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1544/1551 (99.5%) over 1553bp for offset 0 <== THIS IS REAL YDR518W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR518W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/855 (0.2%). Conflicting: 4/855 (0.5%). NoInfo: 2/855 (0.2%). Certain keep: 847/855 (99.1%) ########################## YDR519W (408bp = 136AA) has 12 hits (FPR2) FKBP (FK506 binding protein) 13; pept..e activity (119) Spar (test2) orthologous hit at 89% f408/408 (100.0%) over 408bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f402/402 (100.0%) over 402bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f403/406 (99.3%) over 407bp for offset 0 <== THIS IS REAL YDR519W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR519W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/856 (0.2%). Conflicting: 4/856 (0.5%). NoInfo: 2/856 (0.2%). Certain keep: 848/856 (99.1%) ########################## YDR522C (1509bp = 503AA) (tdist=46.6k) has 49 hits (SPS2) involved in meiosis Spar (test2) orthologous hit at 88% f1494/1508 (99.1%) over 1508bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1416/1457 (97.2%) over 1464bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f1151/1160 (99.2%) over 1163bp for offset 0 <== THIS IS REAL YDR522C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR522C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/857 (0.2%). Conflicting: 4/857 (0.5%). NoInfo: 2/857 (0.2%). Certain keep: 849/857 (99.1%) ########################## YDR523C (1473bp = 491AA) (tdist=44.8k) has 69 hits (SPS1) serine/threonine kinas..te meiosis (136) Spar (test2) orthologous hit at 91% f1467/1472 (99.7%) over 1473bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1473/1473 (100.0%) over 1473bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f1456/1462 (99.6%) over 1464bp for offset 0 <== THIS IS REAL YDR523C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR523C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/858 (0.2%). Conflicting: 4/858 (0.5%). NoInfo: 2/858 (0.2%). Certain keep: 850/858 (99.1%) ########################## YDR524C (1449bp = 483AA) (tdist=42.9k) has 16 hits (AGE1) ARF GAP with effector ..unction(s) (91) Spar (test2) orthologous hit at 90% f1448/1448 (100.0%) over 1448bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f763/811 (94.1%) over 816bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f494/506 (97.6%) over 511bp for offset 0 <== THIS IS REAL YDR524C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR524C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 2/859 (0.2%). Conflicting: 4/859 (0.5%). NoInfo: 2/859 (0.2%). Certain keep: 851/859 (99.1%) ########################## YDR525W (330bp = 110AA) (tdist=41.6k) has 5 hits (API2) Spar (test2) orthologous hit at 90% f198/323 (61.3%) over 327bp for offset 0 Spar (test3) Longest island has f97 at 92% over 191bp Smik (test2) orthologous hit at 84% f265/326 (81.3%) over 330bp for offset 1 Smik (test3) Longest island has f88 at 86% over 159bp Sbay (test2) orthologous hit at 76% f162/325 (49.8%) over 330bp for offset 2 Sbay (test3) Longest island has f93 at 79% over 118bp 0 100 200 300 330 |__________________________|__________________________|__________________________|________| 100f 89% 100f 95% 60bp 100f 97f 92% 191bp Sp348full |..|xxxxxxxx|================>...|xxxx|oooooooooooooooooooooooooooooooooooooooooooooooooo|> 100f 84% 99bp 100f 81% 26bp88f 86% 159bp Sm652full |.|oooooooooooooooooooooooooo>.....|oooooo>.....|ooooooooooooooooooooooooooooooooooooooooo|> 100f 84% 38bp 100f 84% 32bp 75f 80% 44bp 93f 79% 118bp 100fSb437full |....|xxxxxxxxx>......|oooooooo>......|===========>|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>...|ooo|ooo> YDR525W: kill: Spar - keep: YDR525W - Certain Kill. Kill (Spar) and Keep () Current total: Certain kills: 3/860 (0.3%). Conflicting: 4/860 (0.5%). NoInfo: 2/860 (0.2%). Certain keep: 851/860 (99.0%) ########################## YDR525W-A (240bp = 80AA) (tdist=41.0k) has 14 hits (SNA2) Small integral membrane protein Spar (test2) orthologous hit at 90% f240/240 (100.0%) over 240bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f240/240 (100.0%) over 240bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f239/240 (99.6%) over 240bp for offset 0 <== THIS IS REAL YDR525W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR525W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/861 (0.3%). Conflicting: 4/861 (0.5%). NoInfo: 2/861 (0.2%). Certain keep: 852/861 (99.0%) ########################## YDR528W (1272bp = 424AA) (tdist=36.0k) has 9 hits (HLR1) LRE1 homolog; antagonistic to PKA Spar (test2) orthologous hit at 88% f1265/1265 (100.0%) over 1271bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1254/1265 (99.1%) over 1271bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1223/1258 (97.2%) over 1271bp for offset 0 <== THIS IS REAL YDR528W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR528W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/862 (0.3%). Conflicting: 4/862 (0.5%). NoInfo: 2/862 (0.2%). Certain keep: 853/862 (99.0%) ########################## YDR529C (384bp = 128AA) (tdist=35.3k) has 6 hits (QCR7) ubiquinol-cytochrome c o..7 (14 kDa) (112) Spar (test2) orthologous hit at 91% f384/384 (100.0%) over 384bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f384/384 (100.0%) over 384bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f384/384 (100.0%) over 384bp for offset 0 <== THIS IS REAL YDR529C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR529C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/863 (0.3%). Conflicting: 4/863 (0.5%). NoInfo: 2/863 (0.2%). Certain keep: 854/863 (99.0%) ########################## YDR530C (978bp = 326AA) (tdist=34.1k) has 9 hits (APA2) 5',5'''-P-1,P-4-tetrapho..orylase II (103) Spar (test2) orthologous hit at 88% f978/978 (100.0%) over 978bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f964/975 (98.9%) over 978bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f960/973 (98.7%) over 975bp for offset 0 <== THIS IS REAL YDR530C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR530C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/864 (0.3%). Conflicting: 4/864 (0.5%). NoInfo: 2/864 (0.2%). Certain keep: 855/864 (99.0%) ########################## YDR532C (1158bp = 386AA) (tdist=31.3k) has 52 hits (KRE28) Hypothetical ORF Spar (test2) orthologous hit at 88% f1154/1157 (99.7%) over 1158bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1149/1155 (99.5%) over 1156bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1142/1155 (98.9%) over 1158bp for offset 0 <== THIS IS REAL YDR532C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR532C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/865 (0.3%). Conflicting: 4/865 (0.5%). NoInfo: 2/865 (0.2%). Certain keep: 856/865 (99.0%) ########################## YDR534C (1587bp = 529AA) (tdist=27.0k) has 202 hits (FIT1) Hypothetical ORF Spar (test2) orthologous hit at 59% f891/1108 (80.4%) over 1163bp for offset 0 Spar (test3) Longest island has f81 at 66% over 350bp Spar (test2) orthologous hit at 61% f929/1063 (87.4%) over 1093bp for offset 0 Spar (test3) Longest island has f88 at 63% over 401bp Spar (test2) orthologous hit at 70% f611/688 (88.8%) over 708bp for offset 2 Spar (test3) Longest island has f91 at 74% over 440bp <== THIS IS REAL Smik (test2) non-orthologous hit at 55% f450/697 (64.6%) over 745bp for offset 0 Smik (test3) Longest island has f76 at 57% over 308bp Smik (test2) non-orthologous hit at 54% f462/704 (65.6%) over 736bp for offset 0 Smik (test3) Longest island has f75 at 56% over 285bp Smik (test2) non-orthologous hit at 56% f465/667 (69.7%) over 699bp for offset 0 Smik (test3) Longest island has f72 at 57% over 384bp Smik (test2) non-orthologous hit at 55% f421/622 (67.7%) over 657bp for offset 0 Smik (test3) Longest island has f75 at 57% over 231bp Sbay (test2) non-orthologous hit at 55% f953/1239 (76.9%) over 1299bp for offset 2 Sbay (test3) Longest island has f81 at 58% over 574bp Sbay (test2) non-orthologous hit at 55% f641/896 (71.5%) over 954bp for offset 1 Sbay (test3) Longest island has f74 at 57% over 340bp Sbay (test2) non-orthologous hit at 56% f560/694 (80.7%) over 715bp for offset 2 Sbay (test3) Longest island has f84 at 57% over 582bp Sbay (test2) non-orthologous hit at 56% f491/596 (82.4%) over 614bp for offset 1 Sbay (test3) Longest island has f86 at 58% over 448bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k |____|_____|_____|____|_____|_____|____|_____|_____|____|_____|_____|____|_____|_____|____| 81f 66% 350bp 82f 54% 194bp 86f 57% 170bp 82f 61% 285bp Sp348full |==================>|==========>..|=========>....|===============> | 86f 50% 235bp 94f 75% 313bp 88f 63% 401bp Sp348full |============>|=================>........|======================> | 87f 66% 245bp 91f 74% 440bp Sp348full ||xxxxxxxxxxxxx>.|xxxxxxxxxxxxxxxxxxxxxxx| 76f 57% 308bp 81f 47% 669f 54% 52bp Sm740brk |.............|================>|===>....|==> | 75f 56% 285bp 100f 53% 62bp 67f 64% 45bSm740brk |===============>...|===>.........|==>...> | 84f 672f 57% 384bp Sm943brk |===>|====================>.............> | 75f 57% 231bp77f 61% 128bp Sm943brk |============|=======>...............> | 81f 58% 574bp 74f 54% 212bp Sb633full |xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.......|xxxxxxxxxxx>...................> | 74f 57% 340bp Sb68full |...........|oooooooooooooooooo>......................> | 84f 57% 582bp Sb602full |xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>......> | 86f 58% 448bp Sb602full |..........|ooooooooooooooooooooooooo> | YDR534C: kill: - keep: Spar YDR534C - Not enough info. Kill () and Keep (Spar) Current total: Certain kills: 3/866 (0.3%). Conflicting: 4/866 (0.5%). NoInfo: 3/866 (0.3%). Certain keep: 856/866 (98.8%) ########################## YDR536W (1710bp = 570AA) (tdist=22.2k) has 20 hits (STL1) sugar transporter-like protein Spar (test2) orthologous hit at 90% f1703/1703 (100.0%) over 1703bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1703/1703 (100.0%) over 1703bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1671/1697 (98.5%) over 1701bp for offset 1 <== THIS IS REAL YDR536W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YDR536W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/867 (0.3%). Conflicting: 4/867 (0.5%). NoInfo: 3/867 (0.3%). Certain keep: 857/867 (98.8%) ########################## YDR538W (729bp = 243AA) (tdist=20.2k) has 3 hits (PAD1) Phenylacrylic acid decarboxylase Flanking ORFs are: YDR535C and YDR537C. YDR538W skipped ########################## YDR545W (5391bp = 1797AA) (tdist=222) has 67 hits (YRF1-1) Y'-helicase protein 1 Spar (test2) non-orthologous hit at 94% f1591/2234 (71.2%) over 2234bp for offset 1 Spar (test3) Longest island has f100 at 95% over 1591bp <== THIS IS REAL Smik (test2) non-orthologous hit at 93% f2287/2294 (99.7%) over 2294bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 55% f272/543 (50.1%) over 571bp for offset 1 Sbay (test3) Longest island has f74 at 57% over 117bp Sbay (test2) non-orthologous hit at 56% f253/409 (61.9%) over 431bp for offset 2 Sbay (test3) Longest island has f81 at 49% over 150bp Sbay (test2) non-orthologous hit at 55% f266/416 (63.9%) over 439bp for offset 0 Sbay (test3) Longest island has f94 at 54% over 78bp Sbay (test2) non-orthologous hit at 55% f229/393 (58.3%) over 414bp for offset 2 Sbay (test3) Longest island has f80 at 50% over 138bp 01020340506708091k1k11k1k11k1k11k2k22k2k22k2k22k2k33k3k33k3k33k3k34k4k44k4k44k4k44k5k55k5k5k ||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_| 100f 94% 6100f 95% 1591bp Sp284brk |=========|oooooooooooooooooooooooooo> | 74f71766f81f 56% 54bp Sb781brk |=>|x||=>|> | 100781100f 72% 25bp Sb272brk ||>.||o|> | 808876f94f 54% 78bp Sb294brk |>|||>.|> | 74f18082f 55% 22bp Sb91full |x>||=|> | YDR545W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YDR545W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 3/868 (0.3%). Conflicting: 4/868 (0.5%). NoInfo: 3/868 (0.3%). Certain keep: 858/868 (98.8%) ########################## YEL071W (1491bp = 497AA) (tdist=16.3k) has 11 hits (DLD3) D-lactate dehydrogenase Spar (test2) orthologous hit at 92% f1491/1491 (100.0%) over 1491bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1491/1491 (100.0%) over 1491bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1479/1488 (99.4%) over 1491bp for offset 0 <== THIS IS REAL YEL071W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL071W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/869 (0.3%). Conflicting: 4/869 (0.5%). NoInfo: 3/869 (0.3%). Certain keep: 859/869 (98.8%) ########################## YEL069C (1695bp = 565AA) (tdist=21.5k) has 97 hits (HXT13) high-affinity hexose ..ransporter (91) Spar (test2) non-orthologous hit at 90% f1686/1692 (99.6%) over 1695bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f703/722 (97.4%) over 723bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 65% f1305/1541 (84.7%) over 1577bp for offset 0 Sbay (test3) Longest island has f91 at 67% over 795bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|_____|____|____|_____|____|____|_____|____|____|_____|____|____|____|_____| 87f 66% 524bp 91f 67% 795bp Sb447full |.............|xxxxxxxxxxxxxxxxxxxxxxxxxxx>|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | YEL069C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL069C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/870 (0.3%). Conflicting: 4/870 (0.5%). NoInfo: 3/870 (0.3%). Certain keep: 860/870 (98.9%) ########################## YEL066W (540bp = 180AA) (tdist=26.6k) has 5 hits (HPA3) histone acetyltransferas..ex subunit (97) Flanking ORFs are: YEL070W and YEL068C. YEL066W skipped ########################## YEL065W (1887bp = 629AA) (tdist=27.6k) has 18 hits (SIT1) Ferrioxamine B permease Spar (test2) orthologous hit at 90% f1877/1886 (99.5%) over 1887bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1882/1886 (99.8%) over 1887bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1883/1883 (100.0%) over 1886bp for offset 0 <== THIS IS REAL YEL065W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL065W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/871 (0.3%). Conflicting: 4/871 (0.5%). NoInfo: 3/871 (0.3%). Certain keep: 861/871 (98.9%) ########################## YEL063C (1773bp = 591AA) (tdist=31.6k) has 53 hits (CAN1) arginine permease Spar (test2) orthologous hit at 91% f1763/1771 (99.5%) over 1772bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1772/1772 (100.0%) over 1772bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1745/1768 (98.7%) over 1772bp for offset 0 <== THIS IS REAL YEL063C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL063C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/872 (0.3%). Conflicting: 4/872 (0.5%). NoInfo: 3/872 (0.3%). Certain keep: 862/872 (98.9%) ########################## YEL062W (1875bp = 625AA) (tdist=34.3k) has 9 hits (NPR2) Non-membrane-embedded, ..ng protein (112) Spar (test2) orthologous hit at 88% f1866/1875 (99.5%) over 1875bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1859/1872 (99.3%) over 1875bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1313/1332 (98.6%) over 1337bp for offset 2 <== THIS IS REAL YEL062W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL062W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/873 (0.3%). Conflicting: 4/873 (0.5%). NoInfo: 3/873 (0.3%). Certain keep: 863/873 (98.9%) ########################## YEL061C (3117bp = 1039AA) (tdist=36.5k) has 115 hits (CIN8) kinesin-related prot..ic spindle (144) Spar (test2) orthologous hit at 90% f3057/3115 (98.1%) over 3116bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3022/3097 (97.6%) over 3116bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3036/3102 (97.9%) over 3111bp for offset 0 <== THIS IS REAL YEL061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/874 (0.3%). Conflicting: 4/874 (0.5%). NoInfo: 3/874 (0.3%). Certain keep: 864/874 (98.9%) ########################## YEL060C (1908bp = 636AA) (tdist=40.0k) has 33 hits (PRB1) vacuolar protease B Spar (test2) orthologous hit at 88% f1652/1698 (97.3%) over 1710bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1594/1626 (98.0%) over 1635bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1581/1781 (88.8%) over 1802bp for offset 0 Sbay (test3) Longest island has f99 at 84% over 1455bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 11k |___|____|____|___|____|____|____|___|____|____|___|____|____|____|___|____|____|___|____|| 99f 84% 1455bp Sb280full |................|===================================================================|> YEL060C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL060C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/875 (0.3%). Conflicting: 4/875 (0.5%). NoInfo: 3/875 (0.3%). Certain keep: 865/875 (98.9%) ########################## YEL059C-A (225bp = 75AA) (tdist=42.4k) has 6 hits (SOM1) involved in mitochondri..e function (107) Spar (test2) orthologous hit at 91% f225/225 (100.0%) over 225bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f224/224 (100.0%) over 224bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f216/223 (96.9%) over 224bp for offset 0 <== THIS IS REAL YEL059C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL059C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/876 (0.3%). Conflicting: 4/876 (0.5%). NoInfo: 3/876 (0.3%). Certain keep: 866/876 (98.9%) ########################## YEL058W (1674bp = 558AA) (tdist=43.2k) has 5 hits (PCM1) Phosphoacetylglucosamine Mutase Spar (test2) orthologous hit at 88% f1666/1668 (99.9%) over 1674bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1658/1668 (99.4%) over 1674bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1628/1652 (98.5%) over 1669bp for offset 0 <== THIS IS REAL YEL058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/877 (0.3%). Conflicting: 4/877 (0.5%). NoInfo: 3/877 (0.3%). Certain keep: 867/877 (98.9%) ########################## YEL056W (1206bp = 402AA) (tdist=47.1k) has 5 hits (HAT2) subunit of a cytoplasmi..ransferase (107) Spar (test2) orthologous hit at 90% f1206/1206 (100.0%) over 1206bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1196/1204 (99.3%) over 1206bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1202/1205 (99.8%) over 1206bp for offset 0 <== THIS IS REAL YEL056W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL056W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/878 (0.3%). Conflicting: 4/878 (0.5%). NoInfo: 3/878 (0.3%). Certain keep: 868/878 (98.9%) ########################## YEL055C (3069bp = 1023AA) (tdist=48.4k) has 124 hits (POL5) DNA polymerase V Spar (test2) orthologous hit at 88% f3057/3062 (99.8%) over 3069bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f3038/3057 (99.4%) over 3068bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2998/3040 (98.6%) over 3054bp for offset 0 <== THIS IS REAL YEL055C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL055C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/879 (0.3%). Conflicting: 4/879 (0.5%). NoInfo: 3/879 (0.3%). Certain keep: 869/879 (98.9%) ########################## YEL054C (498bp = 166AA) has 8 hits (RPL12A) Ribosomal protein L12A (L15A) (YL23) Spar (test2) orthologous hit at 96% f498/498 (100.0%) over 498bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f498/498 (100.0%) over 498bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f498/498 (100.0%) over 498bp for offset 0 <== THIS IS REAL YEL054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/880 (0.3%). Conflicting: 4/880 (0.5%). NoInfo: 3/880 (0.3%). Certain keep: 870/880 (98.9%) ########################## YEL053C (2202bp = 734AA) has 11 hits (MAK10) glucose-repressible protein require..sRNA virus (112) Spar (test2) orthologous hit at 89% f2202/2202 (100.0%) over 2202bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2195/2195 (100.0%) over 2195bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2086/2108 (99.0%) over 2113bp for offset 0 <== THIS IS REAL YEL053C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL053C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/881 (0.3%). Conflicting: 4/881 (0.5%). NoInfo: 3/881 (0.3%). Certain keep: 871/881 (98.9%) ########################## YEL052W (1530bp = 510AA) has 6 hits (AFG1) ATPase family gene Spar (test2) orthologous hit at 91% f1524/1529 (99.7%) over 1530bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1523/1529 (99.6%) over 1530bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1519/1527 (99.5%) over 1530bp for offset 0 <== THIS IS REAL YEL052W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL052W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/882 (0.3%). Conflicting: 4/882 (0.5%). NoInfo: 3/882 (0.3%). Certain keep: 872/882 (98.9%) ########################## YEL051W (771bp = 257AA) has 20 hits (VMA8) vacuolar ATPase V1 domain subunit D Spar (test2) orthologous hit at 95% f770/771 (99.9%) over 771bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f771/771 (100.0%) over 771bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f713/713 (100.0%) over 713bp for offset 0 <== THIS IS REAL YEL051W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL051W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/883 (0.3%). Conflicting: 4/883 (0.5%). NoInfo: 3/883 (0.3%). Certain keep: 873/883 (98.9%) ########################## YEL050C (1182bp = 394AA) has 5 hits (RML2) mitochondrial ribosomal protein L2 of..ge subunit (98) Spar (test2) orthologous hit at 92% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL YEL050C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL050C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/884 (0.3%). Conflicting: 4/884 (0.5%). NoInfo: 3/884 (0.3%). Certain keep: 874/884 (98.9%) ########################## YEL049W (363bp = 121AA) has 126 hits (PAU2) similar to members of the seripauper..AU) family (95) Spar (test2) orthologous hit at 92% f347/347 (100.0%) over 347bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f363/363 (100.0%) over 363bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f297/342 (86.8%) over 344bp for offset 2 Sbay (test3) Longest island has f99 at 87% over 300bp <== THIS IS REAL 0 100 200 300 363 |_______________________|________________________|________________________|_______________| 99f 87% 300bp Sb280full |............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YEL049W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL049W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/885 (0.3%). Conflicting: 4/885 (0.5%). NoInfo: 3/885 (0.3%). Certain keep: 875/885 (98.9%) ########################## YEL046C (1164bp = 388AA) has 5 hits (GLY1) Threonine Aldolase Spar (test2) orthologous hit at 92% f1164/1164 (100.0%) over 1164bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 89% f737/1164 (63.3%) over 1164bp for offset 0 Smik (test3) Longest island has f100 at 90% over 723bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f1148/1162 (98.8%) over 1164bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|______|_______|_______|_______|______|_______|_______|_______|____| 100f 90% 723bp 100f 90% 250bp Sm1358ful |======================================================>|oooooooooooooooooo>..............| YEL046C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL046C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/886 (0.3%). Conflicting: 4/886 (0.5%). NoInfo: 3/886 (0.3%). Certain keep: 876/886 (98.9%) ########################## YEL044W (501bp = 167AA) has 25 hits (IES6) Ino80 Eighty Subunit 6 Spar (test2) orthologous hit at 86% f498/498 (100.0%) over 501bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 57% f155/283 (54.8%) over 298bp for offset 0 Smik (test3) Longest island has f93 at 61% over 70bp Smik (test2) non-orthologous hit at 62% f94/144 (65.3%) over 150bp for offset 1 Smik (test3) Longest island has f100 at 69% over 75bp Smik (test2) non-orthologous hit at 67% f60/81 (74.1%) over 82bp for offset 0 Smik (test3) Longest island has f100 at 72% over 60bp Smik (test2) non-orthologous hit at 74% f52/67 (77.6%) over 69bp for offset 0 Smik (test3) Longest island has f85 at 75% over 61bp Sbay (test2) orthologous hit at 78% f468/476 (98.3%) over 477bp for offset 1 <== THIS IS REAL 0 100 200 300 400 5501 |________________|_________________|_________________|_________________|_________________|| 93f 61% 70bp 81f 49% 37bp80f 53% 3074f 61% 61bp Sm689full |===========>.........|ooooo>.....|====>....|=========> | 100f 69% 75bp 100100100f 62% 13bp Sm398full |=============>...|o>|==|x>> | 100f 72% 60100f 57% 21bp Sm664brk |==========|xxx> | 85f 75% 61bp Sm136full ||xxxxxxxxxx> | YEL044W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YEL044W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 3/887 (0.3%). Conflicting: 4/887 (0.5%). NoInfo: 3/887 (0.3%). Certain keep: 877/887 (98.9%) ########################## YEL042W (1557bp = 519AA) has 7 hits (GDA1) Guanosine diphosphatase of Golgi membrane Spar (test2) orthologous hit at 89% f1539/1556 (98.9%) over 1557bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1534/1553 (98.8%) over 1557bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1526/1551 (98.4%) over 1557bp for offset 0 <== THIS IS REAL YEL042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/888 (0.3%). Conflicting: 4/888 (0.5%). NoInfo: 3/888 (0.3%). Certain keep: 878/888 (98.9%) ########################## YEL040W (1404bp = 468AA) has 188 hits (UTR2) Product of gene unknown Spar (test2) orthologous hit at 88% f1401/1403 (99.9%) over 1404bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1356/1397 (97.1%) over 1404bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1168/1197 (97.6%) over 1199bp for offset 0 <== THIS IS REAL YEL040W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL040W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/889 (0.3%). Conflicting: 4/889 (0.4%). NoInfo: 3/889 (0.3%). Certain keep: 879/889 (98.9%) ########################## YEL039C (342bp = 114AA) has 8 hits (CYC7) iso-2-cytochrome c Spar (test2) orthologous hit at 90% f342/342 (100.0%) over 342bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f341/341 (100.0%) over 341bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f342/342 (100.0%) over 342bp for offset 0 <== THIS IS REAL YEL039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/890 (0.3%). Conflicting: 4/890 (0.4%). NoInfo: 3/890 (0.3%). Certain keep: 880/890 (98.9%) ########################## YEL038W (726bp = 242AA) has 4 hits (UTR4) Product of gene unknown Spar (test2) orthologous hit at 87% f721/724 (99.6%) over 725bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f706/724 (97.5%) over 725bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f721/725 (99.4%) over 726bp for offset 0 <== THIS IS REAL YEL038W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL038W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/891 (0.3%). Conflicting: 4/891 (0.4%). NoInfo: 3/891 (0.3%). Certain keep: 881/891 (98.9%) ########################## YEL037C (1197bp = 399AA) has 11 hits (RAD23) ubiquitin-like protein Spar (test2) orthologous hit at 89% f1032/1034 (99.8%) over 1040bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1172/1190 (98.5%) over 1197bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f703/704 (99.9%) over 704bp for offset 0 <== THIS IS REAL YEL037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/892 (0.3%). Conflicting: 4/892 (0.4%). NoInfo: 3/892 (0.3%). Certain keep: 882/892 (98.9%) ########################## YEL036C (1503bp = 501AA) has 801 hits (ANP1) subunit of mannosyltransferase complex Spar (test2) orthologous hit at 92% f1502/1503 (99.9%) over 1503bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1408/1412 (99.7%) over 1413bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1407/1439 (97.8%) over 1445bp for offset 2 <== THIS IS REAL YEL036C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL036C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 3/893 (0.3%). Conflicting: 4/893 (0.4%). NoInfo: 3/893 (0.3%). Certain keep: 883/893 (98.9%) ########################## YEL035C (501bp = 167AA) has 5 hits (UTR5) Product of gene unknown Spar (test2) orthologous hit at 93% f345/494 (69.8%) over 496bp for offset 2 Spar (test3) Longest island has f98 at 94% over 258bp Smik (test2) orthologous hit at 86% f233/488 (47.7%) over 491bp for offset 1 Smik (test3) Longest island has f95 at 94% over 130bp Sbay (test2) orthologous hit at 73% f125/294 (42.5%) over 303bp for offset 0 Sbay (test3) Longest island has f89 at 80% over 122bp Sbay (test2) orthologous hit at 90% f88/149 (59.1%) over 149bp for offset 2 Sbay (test3) Longest island has f100 at 92% over 88bp Sbay (test2) orthologous hit at 89% f29/29 (100.0%) over 29bp for offset 0 Sbay (test3) Longest island has f100 at 90% over 29bp 0 100 200 300 400 5501 |________________|_________________|_________________|_________________|_________________|| 98f 94% 258bp Sp355full |................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.........................>| 100f 96% 74bp95f 94% 130bp 100f 84% 105bp 96f 79% 94bp Sm281full |..|xxxxxxxxxxxx|oooooooooooooooooooooo>|xxxxxxxxxxxxxxxxx>...............|===============| 100f 80% 61bp 100f 5488f 76%89f 80% 122bp Sb281full |.|oooooooooo>......|ooo>..|=====>|xxxxxxxxxxxxxxxxxxxxx> | 100f 92% 88bp 100f 92% 61bp Sb281full |===============|xxxxxxxxxx> | 100f 90% 29Sb281full ||====> | YEL035C: kill: Spar Smik Sbay Sbay Sbay - keep: YEL035C - Certain Kill. Kill (Spar Smik Sbay) and Keep () Current total: Certain kills: 4/894 (0.4%). Conflicting: 4/894 (0.4%). NoInfo: 3/894 (0.3%). Certain keep: 883/894 (98.8%) ########################## YEL034W (474bp = 158AA) has 7 hits (HYP2) Translation initiation factor eIF-5A Spar (test2) orthologous hit at 97% f474/474 (100.0%) over 474bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 95% f474/474 (100.0%) over 474bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f473/473 (100.0%) over 473bp for offset 0 <== THIS IS REAL YEL034W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL034W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/895 (0.4%). Conflicting: 4/895 (0.4%). NoInfo: 3/895 (0.3%). Certain keep: 884/895 (98.8%) ########################## YEL032W (2916bp = 972AA) has 38 hits (MCM3) component of DNA replication initiator complex Spar (test2) orthologous hit at 91% f2655/2655 (100.0%) over 2655bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2646/2651 (99.8%) over 2655bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2651/2655 (99.8%) over 2656bp for offset 0 <== THIS IS REAL YEL032W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL032W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/896 (0.4%). Conflicting: 4/896 (0.4%). NoInfo: 3/896 (0.3%). Certain keep: 885/896 (98.8%) ########################## YEL031W (3648bp = 1216AA) has 29 hits (SPF1) P-type ATPase Spar (test2) orthologous hit at 93% f3648/3648 (100.0%) over 3648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f3648/3648 (100.0%) over 3648bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f3636/3646 (99.7%) over 3648bp for offset 0 <== THIS IS REAL YEL031W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL031W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/897 (0.4%). Conflicting: 4/897 (0.4%). NoInfo: 3/897 (0.3%). Certain keep: 886/897 (98.8%) ########################## YEL030W (1935bp = 645AA) has 81 hits (ECM10) similar to Hsp70, involved in cell ..biogenesis (95) Spar (test2) orthologous hit at 89% f1922/1931 (99.5%) over 1935bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f498/525 (94.9%) over 530bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1899/1931 (98.3%) over 1935bp for offset 0 <== THIS IS REAL YEL030W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL030W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/898 (0.4%). Conflicting: 4/898 (0.4%). NoInfo: 3/898 (0.3%). Certain keep: 887/898 (98.8%) ########################## YEL029C (939bp = 313AA) has 11 hits (BUD16) Spar (test2) orthologous hit at 92% f939/939 (100.0%) over 939bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f931/938 (99.3%) over 939bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f936/938 (99.8%) over 939bp for offset 0 <== THIS IS REAL YEL029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/899 (0.4%). Conflicting: 4/899 (0.4%). NoInfo: 3/899 (0.3%). Certain keep: 888/899 (98.8%) ########################## YEL027W (483bp = 161AA) has 17 hits (CUP5) vacuolar ATPase V0 domain subunit c (17 kDa) Spar (test2) orthologous hit at 98% f483/483 (100.0%) over 483bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 95% f483/483 (100.0%) over 483bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f483/483 (100.0%) over 483bp for offset 0 <== THIS IS REAL YEL027W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL027W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/900 (0.4%). Conflicting: 4/900 (0.4%). NoInfo: 3/900 (0.3%). Certain keep: 889/900 (98.8%) ########################## YEL026W (381bp = 127AA) has 9 hits (SNU13) U4/U6.U5 snRNP component Spar (test2) orthologous hit at 97% f381/381 (100.0%) over 381bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 93% f381/381 (100.0%) over 381bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f381/381 (100.0%) over 381bp for offset 0 <== THIS IS REAL YEL026W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL026W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/901 (0.4%). Conflicting: 4/901 (0.4%). NoInfo: 3/901 (0.3%). Certain keep: 890/901 (98.8%) ########################## YEL025C (3567bp = 1189AA) has 8 hits (SRI1) SWI/SNF and RSC interacting protein 1 Spar (test2) orthologous hit at 83% f3522/3560 (98.9%) over 3567bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f3208/3300 (97.2%) over 3314bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f2667/2822 (94.5%) over 2850bp for offset 1 <== THIS IS REAL YEL025C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL025C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/902 (0.4%). Conflicting: 4/902 (0.4%). NoInfo: 3/902 (0.3%). Certain keep: 891/902 (98.8%) ########################## YEL024W (648bp = 216AA) has 4 hits (RIP1) Rieske iron-sulfur protein of the mito..c1 complex (112) Spar (test2) orthologous hit at 94% f647/647 (100.0%) over 647bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f647/647 (100.0%) over 647bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f647/647 (100.0%) over 647bp for offset 0 <== THIS IS REAL YEL024W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL024W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/903 (0.4%). Conflicting: 4/903 (0.4%). NoInfo: 3/903 (0.3%). Certain keep: 892/903 (98.8%) ########################## YEL022W (4380bp = 1460AA) has 37 hits (GEA2) ARF GTP/GDP exchange factor Spar (test2) orthologous hit at 91% f4368/4371 (99.9%) over 4372bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f4345/4371 (99.4%) over 4380bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f4319/4345 (99.4%) over 4349bp for offset 0 <== THIS IS REAL YEL022W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL022W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/904 (0.4%). Conflicting: 4/904 (0.4%). NoInfo: 3/904 (0.3%). Certain keep: 893/904 (98.8%) ########################## YEL021W (804bp = 268AA) has 5 hits (URA3) orotidine-5'-phosphate decarboxylase Spar (test2) orthologous hit at 92% f804/804 (100.0%) over 804bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f804/804 (100.0%) over 804bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f784/800 (98.0%) over 802bp for offset 0 <== THIS IS REAL YEL021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/905 (0.4%). Conflicting: 4/905 (0.4%). NoInfo: 3/905 (0.3%). Certain keep: 894/905 (98.8%) ########################## YEL020W-A (264bp = 88AA) has 10 hits (TIM9) mitochondrial inner membrane translocase Spar (test2) orthologous hit at 95% f264/264 (100.0%) over 264bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f264/264 (100.0%) over 264bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f264/264 (100.0%) over 264bp for offset 0 <== THIS IS REAL YEL020W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL020W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/906 (0.4%). Conflicting: 4/906 (0.4%). NoInfo: 3/906 (0.3%). Certain keep: 895/906 (98.8%) ########################## YEL019C (804bp = 268AA) has 6 hits (MMS21) involved in DNA repair Spar (test2) orthologous hit at 88% f804/804 (100.0%) over 804bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f797/801 (99.5%) over 802bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f804/804 (100.0%) over 804bp for offset 0 <== THIS IS REAL YEL019C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL019C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/907 (0.4%). Conflicting: 4/907 (0.4%). NoInfo: 3/907 (0.3%). Certain keep: 896/907 (98.8%) ########################## YEL018W (840bp = 280AA) has 8 hits (EAF5) YEL018w Spar (test2) orthologous hit at 90% f840/840 (100.0%) over 840bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f482/527 (91.5%) over 528bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f803/837 (95.9%) over 839bp for offset 0 <== THIS IS REAL YEL018W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL018W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/908 (0.4%). Conflicting: 4/908 (0.4%). NoInfo: 3/908 (0.3%). Certain keep: 897/908 (98.8%) ########################## YEL017C-A (132bp = 44AA) has 18 hits (PMP2) Proteolipid associated with plasma m..se (Pma1p) (107) Spar (test2) orthologous hit at 97% f132/132 (100.0%) over 132bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f132/132 (100.0%) over 132bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f132/132 (100.0%) over 132bp for offset 0 <== THIS IS REAL YEL017C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL017C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/909 (0.4%). Conflicting: 4/909 (0.4%). NoInfo: 3/909 (0.3%). Certain keep: 898/909 (98.8%) ########################## YEL013W (1737bp = 579AA) has 16 hits (VAC8) An armadillo repeat-containing prote..r membrane (117) Spar (test2) orthologous hit at 93% f1734/1734 (100.0%) over 1737bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1730/1736 (99.7%) over 1737bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f1663/1728 (96.2%) over 1734bp for offset 0 <== THIS IS REAL YEL013W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL013W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/910 (0.4%). Conflicting: 4/910 (0.4%). NoInfo: 3/910 (0.3%). Certain keep: 899/910 (98.8%) ########################## YEL011W (2115bp = 705AA) has 7 hits (GLC3) 1,4-glucan-6-(1,4-glucano)-transferase Spar (test2) orthologous hit at 91% f2115/2115 (100.0%) over 2115bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2109/2114 (99.8%) over 2115bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2102/2113 (99.5%) over 2115bp for offset 0 <== THIS IS REAL YEL011W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL011W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/911 (0.4%). Conflicting: 4/911 (0.4%). NoInfo: 3/911 (0.3%). Certain keep: 900/911 (98.8%) ########################## YEL009C (846bp = 282AA) has 7 hits (GCN4) transcriptional activator of amino aci..etic genes (100) Spar (test2) non-orthologous hit at 90% f845/846 (99.9%) over 846bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f846/846 (100.0%) over 846bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f558/571 (97.7%) over 573bp for offset 0 <== THIS IS REAL YEL009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/912 (0.4%). Conflicting: 4/912 (0.4%). NoInfo: 3/912 (0.3%). Certain keep: 901/912 (98.8%) ########################## YEL007W (2001bp = 667AA) has 952 hits (TOS9) Hypothetical ORF Spar (test2) orthologous hit at 90% f500/500 (100.0%) over 500bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f958/1081 (88.6%) over 1099bp for offset 0 Smik (test3) Longest island has f98 at 84% over 879bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1399/1413 (99.0%) over 1424bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 22k |___|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|| 98f 84% 879bp Sm283full |..........|======================================> | YEL007W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL007W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/913 (0.4%). Conflicting: 4/913 (0.4%). NoInfo: 3/913 (0.3%). Certain keep: 902/913 (98.8%) ########################## YEL005C (849bp = 283AA) has 8 hits (VAB2) Vac8p binding protein of 31 kDa Spar (test2) orthologous hit at 88% f357/360 (99.2%) over 361bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f573/573 (100.0%) over 573bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f813/844 (96.3%) over 849bp for offset 0 <== THIS IS REAL YEL005C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL005C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/914 (0.4%). Conflicting: 4/914 (0.4%). NoInfo: 3/914 (0.3%). Certain keep: 903/914 (98.8%) ########################## YEL004W (1029bp = 343AA) has 14 hits (YEA4) similar to Gog5, which is involved i..resistance (101) Spar (test2) orthologous hit at 88% f1029/1029 (100.0%) over 1029bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1021/1027 (99.4%) over 1029bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f969/1000 (96.9%) over 1005bp for offset 1 <== THIS IS REAL YEL004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/915 (0.4%). Conflicting: 4/915 (0.4%). NoInfo: 3/915 (0.3%). Certain keep: 904/915 (98.8%) ########################## YEL003W (372bp = 124AA) has 34 hits (GIM4) bovine prefoldin subunit 2 homolog (putative) Spar (test2) orthologous hit at 90% f357/368 (97.0%) over 369bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f321/358 (89.7%) over 360bp for offset 2 Smik (test3) Longest island has f100 at 89% over 321bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f365/369 (98.9%) over 370bp for offset 0 <== THIS IS REAL 0 100 200 300 372 |_______________________|_______________________|_______________________|_________________| 100f 89% 321bp Sm283full |.........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YEL003W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL003W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/916 (0.4%). Conflicting: 4/916 (0.4%). NoInfo: 3/916 (0.3%). Certain keep: 905/916 (98.8%) ########################## YEL002C (1293bp = 431AA) has 5 hits (WBP1) oligosaccharyl transferase glycoprote..ta subunit (104) Spar (test2) orthologous hit at 91% f1292/1292 (100.0%) over 1292bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1288/1291 (99.8%) over 1292bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1285/1292 (99.5%) over 1293bp for offset 0 <== THIS IS REAL YEL002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YEL002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/917 (0.4%). Conflicting: 4/917 (0.4%). NoInfo: 3/917 (0.3%). Certain keep: 906/917 (98.8%) ########################## YER001W (2289bp = 763AA) has 14 hits (MNN1) Alpha-1,3-mannosyltransferase Spar (test2) orthologous hit at 87% f2149/2158 (99.6%) over 2161bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f2248/2281 (98.6%) over 2288bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1404/1891 (74.2%) over 1905bp for offset 0 Sbay (test3) Longest island has f98 at 81% over 1393bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k |__|___|___|___|___|___|___|___|___|___|___|___|___|___|__|___|___|___|___|___|___|___|___| 93f 70% 239bp 98f 81% 1393bp Sb87full |.|=========>........|ooooooooooooooooooooooooooooooooooooooooooooooooooooo| YER001W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER001W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/918 (0.4%). Conflicting: 4/918 (0.4%). NoInfo: 3/918 (0.3%). Certain keep: 907/918 (98.8%) ########################## YER002W (696bp = 232AA) has 124 hits (NOP16) ribosome biogenesis protein Spar (test2) orthologous hit at 89% f689/689 (100.0%) over 695bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f682/694 (98.3%) over 696bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL YER002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/919 (0.4%). Conflicting: 4/919 (0.4%). NoInfo: 3/919 (0.3%). Certain keep: 908/919 (98.8%) ########################## YER005W (1893bp = 631AA) has 5 hits (YND1) apyrase (NDPase/NTPase) Spar (test2) orthologous hit at 90% f1893/1893 (100.0%) over 1893bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1889/1892 (99.8%) over 1893bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1876/1890 (99.3%) over 1893bp for offset 0 <== THIS IS REAL YER005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/920 (0.4%). Conflicting: 4/920 (0.4%). NoInfo: 3/920 (0.3%). Certain keep: 909/920 (98.8%) ########################## YER006W (1563bp = 521AA) has 16 hits (NUG1) Nuclear GTPase involved in Ribosome biogenesis Spar (test2) orthologous hit at 92% f1556/1561 (99.7%) over 1562bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1322/1562 (84.6%) over 1563bp for offset 0 Smik (test3) Longest island has f100 at 88% over 1326bp <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1555/1560 (99.7%) over 1562bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k |____|_____|_____|_____|____|_____|_____|_____|____|_____|_____|_____|____|_____|_____|___| 100f 88% 1326bp 100f 89% 238bpSm283full |===========================================================================|ooooooooooooo| YER006W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER006W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/921 (0.4%). Conflicting: 4/921 (0.4%). NoInfo: 3/921 (0.3%). Certain keep: 910/921 (98.8%) ########################## YER007W (1557bp = 519AA) has 15 hits (PAC2) (putative) tubulin cofactor E, invol.. stability (108) Spar (test2) orthologous hit at 86% f1501/1547 (97.0%) over 1548bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1477/1548 (95.4%) over 1556bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1445/1520 (95.1%) over 1530bp for offset 1 <== THIS IS REAL YER007W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER007W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/922 (0.4%). Conflicting: 4/922 (0.4%). NoInfo: 3/922 (0.3%). Certain keep: 911/922 (98.8%) ########################## YER008C (4011bp = 1337AA) has 166 hits (SEC3) SEC3 encodes the 144 kD and 91 kD ..ngth Sec3p (201) Spar (test2) orthologous hit at 88% f3995/4008 (99.7%) over 4011bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2941/3015 (97.5%) over 3024bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f811/814 (99.6%) over 815bp for offset 0 <== THIS IS REAL YER008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/923 (0.4%). Conflicting: 4/923 (0.4%). NoInfo: 3/923 (0.3%). Certain keep: 912/923 (98.8%) ########################## YER009W (378bp = 126AA) has 5 hits (NTF2) nuclear transport factor, homologous t..actor NTF2 (128) Spar (test2) orthologous hit at 95% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL YER009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/924 (0.4%). Conflicting: 4/924 (0.4%). NoInfo: 3/924 (0.3%). Certain keep: 913/924 (98.8%) ########################## YER011W (765bp = 255AA) has 250 hits (TIR1) Cold-shock induced protein of the Sr..h proteins (128) Spar (test2) orthologous hit at 84% f737/757 (97.4%) over 765bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f675/750 (90.0%) over 765bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f608/630 (96.5%) over 635bp for offset 0 <== THIS IS REAL YER011W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER011W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/925 (0.4%). Conflicting: 4/925 (0.4%). NoInfo: 3/925 (0.3%). Certain keep: 914/925 (98.8%) ########################## YER012W (597bp = 199AA) has 6 hits (PRE1) 22.6 kDa proteasome subunit Spar (test2) orthologous hit at 92% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL YER012W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER012W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/926 (0.4%). Conflicting: 4/926 (0.4%). NoInfo: 3/926 (0.3%). Certain keep: 915/926 (98.8%) ########################## YER013W (3438bp = 1146AA) has 49 hits (PRP22) helicase-like protein Spar (test2) orthologous hit at 90% f3433/3435 (99.9%) over 3438bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3413/3432 (99.4%) over 3438bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f3349/3426 (97.8%) over 3438bp for offset 0 <== THIS IS REAL YER013W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER013W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/927 (0.4%). Conflicting: 4/927 (0.4%). NoInfo: 3/927 (0.3%). Certain keep: 916/927 (98.8%) ########################## YER014W (1620bp = 540AA) has 8 hits (HEM14) protoporphyrinogen oxidase Flanking ORFs are: YER012W and YER014W. YER014W skipped ########################## YER015W (2235bp = 745AA) has 15 hits (FAA2) Acyl-CoA synthetase (fatty acid activator 2) Flanking ORFs are: YER012W and YER014W. YER015W skipped ########################## YER016W (1035bp = 345AA) has 6 hits (BIM1) microtubule-binding protein Spar (test2) orthologous hit at 90% f1032/1034 (99.8%) over 1035bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1035/1035 (100.0%) over 1035bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1001/1027 (97.5%) over 1035bp for offset 0 <== THIS IS REAL YER016W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER016W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/928 (0.4%). Conflicting: 4/928 (0.4%). NoInfo: 3/928 (0.3%). Certain keep: 917/928 (98.8%) ########################## YER017C (2286bp = 762AA) has 56 hits (AFG3) ATP-dependent metalloprotease Spar (test2) orthologous hit at 90% f2269/2279 (99.6%) over 2286bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2273/2280 (99.7%) over 2285bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2156/2264 (95.2%) over 2286bp for offset 0 <== THIS IS REAL YER017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/929 (0.4%). Conflicting: 4/929 (0.4%). NoInfo: 3/929 (0.3%). Certain keep: 918/929 (98.8%) ########################## YER018C (666bp = 222AA) has 6 hits (SPC25) component of spindle pole Spar (test2) orthologous hit at 89% f656/665 (98.6%) over 666bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f540/612 (88.2%) over 622bp for offset 0 Sbay (test3) Longest island has f99 at 76% over 507bp <== THIS IS REAL 0 100 200 300 400 500 600 666 |____________|_____________|____________|_____________|____________|_____________|________| 99f 76% 507bp Sb84full |===================================================================>...............> | YER018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/930 (0.4%). Conflicting: 4/930 (0.4%). NoInfo: 3/930 (0.3%). Certain keep: 919/930 (98.8%) ########################## YER019W (1434bp = 478AA) has 8 hits (ISC1) Spar (test2) orthologous hit at 88% f1373/1429 (96.1%) over 1434bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1359/1422 (95.6%) over 1425bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f228/302 (75.5%) over 310bp for offset 0 Sbay (test3) Longest island has f89 at 76% over 229bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|______|_____|_____|_____|______|_____|_____|______|_____|_____|_____|__| 100f189f 76% 229bp Sb84brk |>..||xxxxxxxxxxxxxx> | YER019W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YER019W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 4/931 (0.4%). Conflicting: 4/931 (0.4%). NoInfo: 3/931 (0.3%). Certain keep: 920/931 (98.8%) ########################## YER019C-A (267bp = 89AA) has 8 hits (SBH2) homologous to Sbh1p Spar (test2) orthologous hit at 93% f267/267 (100.0%) over 267bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f267/267 (100.0%) over 267bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f267/267 (100.0%) over 267bp for offset 0 <== THIS IS REAL YER019C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER019C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/932 (0.4%). Conflicting: 4/932 (0.4%). NoInfo: 3/932 (0.3%). Certain keep: 921/932 (98.8%) ########################## YER020W (1350bp = 450AA) has 55 hits (GPA2) nucleotide binding regulatory protein Spar (test2) orthologous hit at 88% f1320/1342 (98.4%) over 1350bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1184/1237 (95.7%) over 1243bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1167/1263 (92.4%) over 1271bp for offset 0 <== THIS IS REAL YER020W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER020W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/933 (0.4%). Conflicting: 4/933 (0.4%). NoInfo: 3/933 (0.3%). Certain keep: 922/933 (98.8%) ########################## YER021W (1572bp = 524AA) has 24 hits (RPN3) component of the regulatory module o..58 subunit (133) Spar (test2) orthologous hit at 92% f1572/1572 (100.0%) over 1572bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1564/1570 (99.6%) over 1572bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1572/1572 (100.0%) over 1572bp for offset 0 <== THIS IS REAL YER021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/934 (0.4%). Conflicting: 4/934 (0.4%). NoInfo: 3/934 (0.3%). Certain keep: 923/934 (98.8%) ########################## YER022W (2064bp = 688AA) has 37 hits (SRB4) subunit of RNA polymerase II holoenz..or complex (100) Spar (test2) orthologous hit at 90% f2064/2064 (100.0%) over 2064bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2012/2028 (99.2%) over 2033bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2043/2059 (99.2%) over 2064bp for offset 0 <== THIS IS REAL YER022W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER022W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/935 (0.4%). Conflicting: 4/935 (0.4%). NoInfo: 3/935 (0.3%). Certain keep: 924/935 (98.8%) ########################## YER023W (861bp = 287AA) has 5 hits (PRO3) delta 1-pyrroline-5-carboxylate reductase Spar (test2) orthologous hit at 93% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f861/861 (100.0%) over 861bp for offset 0 <== THIS IS REAL YER023W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER023W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/936 (0.4%). Conflicting: 4/936 (0.4%). NoInfo: 3/936 (0.3%). Certain keep: 925/936 (98.8%) ########################## YER024W (2772bp = 924AA) has 8 hits (YAT2) carnitine acetyltransferase Spar (test2) orthologous hit at 89% f1899/1920 (98.9%) over 1928bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2124/2131 (99.7%) over 2136bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2750/2766 (99.4%) over 2772bp for offset 0 <== THIS IS REAL YER024W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER024W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/937 (0.4%). Conflicting: 4/937 (0.4%). NoInfo: 3/937 (0.3%). Certain keep: 926/937 (98.8%) ########################## YER025W (1584bp = 528AA) has 10 hits (GCD11) gamma subunit of translational init..ctor eIF-2 (99) Spar (test2) orthologous hit at 94% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL YER025W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER025W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/938 (0.4%). Conflicting: 4/938 (0.4%). NoInfo: 3/938 (0.3%). Certain keep: 927/938 (98.8%) ########################## YER026C (831bp = 277AA) has 5 hits (CHO1) phosphatidylserine synthase Spar (test2) orthologous hit at 92% f831/831 (100.0%) over 831bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f831/831 (100.0%) over 831bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f826/830 (99.5%) over 831bp for offset 0 <== THIS IS REAL YER026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/939 (0.4%). Conflicting: 4/939 (0.4%). NoInfo: 3/939 (0.3%). Certain keep: 928/939 (98.8%) ########################## YER027C (1254bp = 418AA) has 20 hits (GAL83) glucose repression protein, a compo..f1 complex (104) Spar (test2) orthologous hit at 91% f1254/1254 (100.0%) over 1254bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1254/1254 (100.0%) over 1254bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1053/1100 (95.7%) over 1107bp for offset 1 <== THIS IS REAL YER027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/940 (0.4%). Conflicting: 4/940 (0.4%). NoInfo: 3/940 (0.3%). Certain keep: 929/940 (98.8%) ########################## YER029C (591bp = 197AA) has 45 hits (SMB1) U1 snRNP protein Spar (test2) orthologous hit at 90% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f518/518 (100.0%) over 518bp for offset 0 <== THIS IS REAL YER029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/941 (0.4%). Conflicting: 4/941 (0.4%). NoInfo: 3/941 (0.3%). Certain keep: 930/941 (98.8%) ########################## YER031C (672bp = 224AA) has 32 hits (YPT31) ras-like GTPase, highly homologous to YPT32 Spar (test2) orthologous hit at 93% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL YER031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/942 (0.4%). Conflicting: 4/942 (0.4%). NoInfo: 3/942 (0.3%). Certain keep: 931/942 (98.8%) ########################## YER032W (2778bp = 926AA) has 14 hits (FIR1) Putative participant in 3' mRNA processing Spar (test2) orthologous hit at 84% f2674/2766 (96.7%) over 2778bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f2571/2757 (93.3%) over 2778bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f2539/2737 (92.8%) over 2769bp for offset 2 <== THIS IS REAL YER032W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER032W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/943 (0.4%). Conflicting: 4/943 (0.4%). NoInfo: 3/943 (0.3%). Certain keep: 932/943 (98.8%) ########################## YER033C (3231bp = 1077AA) has 346 hits (ZRG8) zinc regulated gene Spar (test2) orthologous hit at 73% f1720/2049 (83.9%) over 2093bp for offset 0 Spar (test3) Longest island has f97 at 84% over 1449bp <== THIS IS REAL Smik (test2) orthologous hit at 68% f1527/1900 (80.4%) over 1944bp for offset 0 Smik (test3) Longest island has f97 at 79% over 1146bp <== THIS IS REAL Sbay (test2) orthologous hit at 68% f1356/1555 (87.2%) over 1584bp for offset 0 Sbay (test3) Longest island has f95 at 74% over 1008bp <== THIS IS REAL 0 10020030040500600700800901k 1k 1k 1k1k 1k 1k 1k 1k1k 2k 2k 2k 2k2k 2k 2k 2k2k 2k 3k 3k 33k |_|__|__|__|_|__|__|__|__|_|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|_|__|__|__|__|| 97f 84% 1449bp Sp424full |..................|ooooooooooooooooooooooooooooooooooooooo|> 97f 79% 1146bp Sm283full |.......................|==============================|> 95f 74% 1008bp Sb83full |................|===========================| YER033C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER033C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/944 (0.4%). Conflicting: 4/944 (0.4%). NoInfo: 3/944 (0.3%). Certain keep: 933/944 (98.8%) ########################## YER035W (438bp = 146AA) has 6 hits (EDC2) Functions with Edc1p to stimulate mRNA decapping Spar (test2) orthologous hit at 85% f434/435 (99.8%) over 438bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f424/432 (98.1%) over 436bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f437/438 (99.8%) over 438bp for offset 0 <== THIS IS REAL YER035W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER035W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/945 (0.4%). Conflicting: 4/945 (0.4%). NoInfo: 3/945 (0.3%). Certain keep: 934/945 (98.8%) ########################## YER036C (1833bp = 611AA) has 47 hits (KRE30) Hypothetical ORF Spar (test2) orthologous hit at 94% f1833/1833 (100.0%) over 1833bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1833/1833 (100.0%) over 1833bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1122/1132 (99.1%) over 1134bp for offset 0 <== THIS IS REAL YER036C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER036C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/946 (0.4%). Conflicting: 4/946 (0.4%). NoInfo: 3/946 (0.3%). Certain keep: 935/946 (98.8%) ########################## YER037W (966bp = 322AA) has 12 hits (PHM8) involved in phosphate metabolism Spar (test2) orthologous hit at 91% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f947/964 (98.2%) over 966bp for offset 0 <== THIS IS REAL YER037W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER037W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/947 (0.4%). Conflicting: 4/947 (0.4%). NoInfo: 3/947 (0.3%). Certain keep: 936/947 (98.8%) ########################## YER038C (1395bp = 465AA) has 36 hits (KRE29) Hypothetical ORF Spar (test2) orthologous hit at 85% f1376/1388 (99.1%) over 1395bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1094/1113 (98.3%) over 1124bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1230/1271 (96.8%) over 1285bp for offset 0 <== THIS IS REAL YER038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/948 (0.4%). Conflicting: 4/948 (0.4%). NoInfo: 3/948 (0.3%). Certain keep: 937/948 (98.8%) ########################## YER039C (750bp = 250AA) has 11 hits (HVG1) (putative) nucleotide sugar transporter Spar (test2) orthologous hit at 89% f748/748 (100.0%) over 748bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f181/371 (48.8%) over 374bp for offset 1 Smik (test3) Longest island has f100 at 75% over 178bp Smik (test2) orthologous hit at 76% f250/371 (67.4%) over 376bp for offset 0 Smik (test3) Longest island has f100 at 77% over 241bp Sbay (test2) orthologous hit at 79% f745/748 (99.6%) over 749bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 750 |___________|___________|___________|___________|___________|___________|___________|_____| 100f 75% 178bp 100f 79% 9295f 81% 103bpSm283full |=====================|xxxxxxxxxx|ooooooooooo>| 100f 77% 241bp Sm283full |....|xxxxxxxxxxxxxxxxxxxxxxxxxxxx>..........> | YER039C: kill: Smik Smik - keep: Spar Sbay YER039C - Conflicting. Kill (Smik) and Keep (Spar Sbay) Current total: Certain kills: 4/949 (0.4%). Conflicting: 5/949 (0.5%). NoInfo: 3/949 (0.3%). Certain keep: 937/949 (98.7%) ########################## YER040W (2193bp = 731AA) has 67 hits (GLN3) Transcriptional activator of nitroge..ated genes (97) Spar (test2) orthologous hit at 91% f2181/2187 (99.7%) over 2193bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1609/1626 (99.0%) over 1633bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2176/2183 (99.7%) over 2193bp for offset 0 <== THIS IS REAL YER040W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER040W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/950 (0.4%). Conflicting: 5/950 (0.5%). NoInfo: 3/950 (0.3%). Certain keep: 938/950 (98.7%) ########################## YER041W (2280bp = 760AA) has 18 hits (YEN1) Spar (test2) orthologous hit at 86% f2263/2278 (99.3%) over 2280bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2026/2065 (98.1%) over 2082bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2199/2265 (97.1%) over 2280bp for offset 0 <== THIS IS REAL YER041W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER041W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/951 (0.4%). Conflicting: 5/951 (0.5%). NoInfo: 3/951 (0.3%). Certain keep: 939/951 (98.7%) ########################## YER042W (555bp = 185AA) has 6 hits (MXR1) peptide methionine sulfoxide reductase Spar (test2) orthologous hit at 90% f555/555 (100.0%) over 555bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f555/555 (100.0%) over 555bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f545/554 (98.4%) over 555bp for offset 0 <== THIS IS REAL YER042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/952 (0.4%). Conflicting: 5/952 (0.5%). NoInfo: 3/952 (0.3%). Certain keep: 940/952 (98.7%) ########################## YER043C (1350bp = 450AA) has 4 hits (SAH1) putative S-adenosyl-L-homocysteine hydrolase Spar (test2) orthologous hit at 94% f1350/1350 (100.0%) over 1350bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1350/1350 (100.0%) over 1350bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f1350/1350 (100.0%) over 1350bp for offset 0 <== THIS IS REAL YER043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/953 (0.4%). Conflicting: 5/953 (0.5%). NoInfo: 3/953 (0.3%). Certain keep: 941/953 (98.7%) ########################## YER044C (447bp = 149AA) has 5 hits (ERG28) Spar (test2) orthologous hit at 94% f447/447 (100.0%) over 447bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f447/447 (100.0%) over 447bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f447/447 (100.0%) over 447bp for offset 0 <== THIS IS REAL YER044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/954 (0.4%). Conflicting: 5/954 (0.5%). NoInfo: 3/954 (0.3%). Certain keep: 942/954 (98.7%) ########################## YER045C (1470bp = 490AA) has 29 hits (ACA1) Spar (test2) orthologous hit at 79% f983/1050 (93.6%) over 1060bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f851/928 (91.7%) over 948bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f648/700 (92.6%) over 711bp for offset 0 <== THIS IS REAL YER045C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER045C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/955 (0.4%). Conflicting: 5/955 (0.5%). NoInfo: 3/955 (0.3%). Certain keep: 943/955 (98.7%) ########################## YER046W (432bp = 144AA) has 3 hits (SPO73) Hypothetical ORF Spar (test2) orthologous hit at 90% f431/431 (100.0%) over 431bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f426/430 (99.1%) over 431bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f429/431 (99.5%) over 432bp for offset 0 <== THIS IS REAL YER046W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER046W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/956 (0.4%). Conflicting: 5/956 (0.5%). NoInfo: 3/956 (0.3%). Certain keep: 944/956 (98.7%) ########################## YER047C (2694bp = 898AA) has 108 hits (SAP1) member of the AAA ATPase family of proteins Spar (test2) orthologous hit at 81% f2016/2164 (93.2%) over 2186bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1866/1909 (97.7%) over 1920bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2577/2666 (96.7%) over 2694bp for offset 0 <== THIS IS REAL YER047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/957 (0.4%). Conflicting: 5/957 (0.5%). NoInfo: 3/957 (0.3%). Certain keep: 945/957 (98.7%) ########################## YER048C (1176bp = 392AA) has 40 hits (CAJ1) homologous to E. coli DnaJ Spar (test2) orthologous hit at 91% f1176/1176 (100.0%) over 1176bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1176/1176 (100.0%) over 1176bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1176/1176 (100.0%) over 1176bp for offset 0 <== THIS IS REAL YER048C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER048C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/958 (0.4%). Conflicting: 5/958 (0.5%). NoInfo: 3/958 (0.3%). Certain keep: 946/958 (98.7%) ########################## YER050C (609bp = 203AA) has 11 hits (RSM18) mitochondrial ribosome small subunit component Spar (test2) orthologous hit at 85% f599/604 (99.2%) over 608bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f471/600 (78.5%) over 608bp for offset 0 Smik (test3) Longest island has f100 at 83% over 464bp <== THIS IS REAL Sbay (test2) orthologous hit at 75% f500/600 (83.3%) over 604bp for offset 2 Sbay (test3) Longest island has f98 at 82% over 476bp <== THIS IS REAL 0 100 200 300 400 500 60609 |_____________|______________|______________|______________|_____________|______________|_| 100f 83% 464bp Sm283full |......................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> 98f 82% 476bp Sb81full |....................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YER050C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER050C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/959 (0.4%). Conflicting: 5/959 (0.5%). NoInfo: 3/959 (0.3%). Certain keep: 947/959 (98.7%) ########################## YER052C (1584bp = 528AA) has 8 hits (HOM3) Aspartate kinase (L-aspartate 4-P-tra..C 2.7.2.4) (102) Spar (test2) orthologous hit at 93% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL YER052C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER052C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/960 (0.4%). Conflicting: 5/960 (0.5%). NoInfo: 3/960 (0.3%). Certain keep: 948/960 (98.8%) ########################## YER054C (1647bp = 549AA) has 21 hits (GIP2) (putative) regulator of Glc7, a PP1 ..hosphatase (106) Spar (test2) orthologous hit at 88% f686/686 (100.0%) over 686bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f967/973 (99.4%) over 976bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 76% f1561/1630 (95.8%) over 1647bp for offset 0 <== THIS IS REAL YER054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/961 (0.4%). Conflicting: 5/961 (0.5%). NoInfo: 3/961 (0.3%). Certain keep: 949/961 (98.8%) ########################## YER055C (894bp = 298AA) has 9 hits (HIS1) ATP phosphoribosyltransferase Spar (test2) non-orthologous hit at 90% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f891/893 (99.8%) over 894bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL YER055C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER055C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/962 (0.4%). Conflicting: 5/962 (0.5%). NoInfo: 3/962 (0.3%). Certain keep: 950/962 (98.8%) ########################## YER056C (1602bp = 534AA) has 23 hits (FCY2) purine-cytosine permease Spar (test2) orthologous hit at 90% f611/611 (100.0%) over 611bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1601/1601 (100.0%) over 1601bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1590/1598 (99.5%) over 1601bp for offset 0 <== THIS IS REAL YER056C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER056C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/963 (0.4%). Conflicting: 5/963 (0.5%). NoInfo: 3/963 (0.3%). Certain keep: 951/963 (98.8%) ########################## YER057C (390bp = 130AA) has 7 hits (HMF1) heat-regulated protein Spar (test2) orthologous hit at 91% f389/389 (100.0%) over 389bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f389/389 (100.0%) over 389bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f390/390 (100.0%) over 390bp for offset 0 <== THIS IS REAL YER057C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER057C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/964 (0.4%). Conflicting: 5/964 (0.5%). NoInfo: 3/964 (0.3%). Certain keep: 952/964 (98.8%) ########################## YER058W (324bp = 108AA) has 10 hits (PET117) cytochrome c oxidase assembly factor Spar (test2) orthologous hit at 90% f324/324 (100.0%) over 324bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f324/324 (100.0%) over 324bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f324/324 (100.0%) over 324bp for offset 0 <== THIS IS REAL YER058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/965 (0.4%). Conflicting: 5/965 (0.5%). NoInfo: 3/965 (0.3%). Certain keep: 953/965 (98.8%) ########################## YER059W (1263bp = 421AA) has 13 hits (PCL6) PHO85 cyclin Spar (test2) orthologous hit at 89% f1257/1259 (99.8%) over 1263bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f906/939 (96.5%) over 945bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f869/936 (92.8%) over 947bp for offset 0 <== THIS IS REAL YER059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/966 (0.4%). Conflicting: 5/966 (0.5%). NoInfo: 3/966 (0.3%). Certain keep: 954/966 (98.8%) ########################## YER060W (1587bp = 529AA) has 14 hits (FCY21) purine-cytosine permease Spar (test2) orthologous hit at 90% f1587/1587 (100.0%) over 1587bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1579/1586 (99.6%) over 1587bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1564/1581 (98.9%) over 1587bp for offset 0 <== THIS IS REAL YER060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/967 (0.4%). Conflicting: 5/967 (0.5%). NoInfo: 3/967 (0.3%). Certain keep: 955/967 (98.8%) ########################## YER060W-A (1593bp = 531AA) has 16 hits (FCY22) purine-cytosine permease Spar (test2) orthologous hit at 89% f1469/1471 (99.9%) over 1472bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1420/1429 (99.4%) over 1431bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1428/1441 (99.1%) over 1443bp for offset 0 <== THIS IS REAL YER060W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER060W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/968 (0.4%). Conflicting: 5/968 (0.5%). NoInfo: 3/968 (0.3%). Certain keep: 956/968 (98.8%) ########################## YER061C (1329bp = 443AA) has 8 hits (CEM1) Protein homologous to beta-keto-acyl synthase Spar (test2) orthologous hit at 88% f1329/1329 (100.0%) over 1329bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f385/385 (100.0%) over 388bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f639/639 (100.0%) over 639bp for offset 0 <== THIS IS REAL YER061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/969 (0.4%). Conflicting: 5/969 (0.5%). NoInfo: 3/969 (0.3%). Certain keep: 957/969 (98.8%) ########################## YER062C (753bp = 251AA) has 7 hits (HOR2) DL-glycerol-3-phosphatase Spar (test2) orthologous hit at 92% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f752/752 (100.0%) over 752bp for offset 0 <== THIS IS REAL YER062C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER062C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/970 (0.4%). Conflicting: 5/970 (0.5%). NoInfo: 3/970 (0.3%). Certain keep: 958/970 (98.8%) ########################## YER063W (657bp = 219AA) has 9 hits (THO1) (putative) involved in transcription Spar (test2) orthologous hit at 85% f421/430 (97.9%) over 437bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f358/380 (94.2%) over 383bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f314/317 (99.1%) over 317bp for offset 0 <== THIS IS REAL YER063W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER063W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/971 (0.4%). Conflicting: 5/971 (0.5%). NoInfo: 3/971 (0.3%). Certain keep: 959/971 (98.8%) ########################## YER065C (1674bp = 558AA) has 7 hits (ICL1) isocitrate lyase Spar (test2) orthologous hit at 91% f1674/1674 (100.0%) over 1674bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1674/1674 (100.0%) over 1674bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1667/1670 (99.8%) over 1674bp for offset 0 <== THIS IS REAL YER065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/972 (0.4%). Conflicting: 5/972 (0.5%). NoInfo: 3/972 (0.3%). Certain keep: 960/972 (98.8%) ########################## YER068W (1764bp = 588AA) has 11 hits (MOT2) putative zinc finger protein Spar (test2) orthologous hit at 90% f1764/1764 (100.0%) over 1764bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1756/1762 (99.7%) over 1763bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1759/1763 (99.8%) over 1764bp for offset 0 <== THIS IS REAL YER068W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER068W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/973 (0.4%). Conflicting: 5/973 (0.5%). NoInfo: 3/973 (0.3%). Certain keep: 961/973 (98.8%) ########################## YER069W (2592bp = 864AA) has 8 hits (ARG5,6) N-acetyl-gamma-glutamyl-phosphate r..ate kinase (115) Spar (test2) orthologous hit at 90% f2592/2592 (100.0%) over 2592bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2588/2591 (99.9%) over 2592bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1710/1775 (96.3%) over 1777bp for offset 0 <== THIS IS REAL YER069W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER069W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/974 (0.4%). Conflicting: 5/974 (0.5%). NoInfo: 3/974 (0.3%). Certain keep: 962/974 (98.8%) ########################## YER070W (2667bp = 889AA) has 14 hits (RNR1) ribonucleotide reductase Spar (test2) orthologous hit at 92% f2667/2667 (100.0%) over 2667bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2657/2661 (99.8%) over 2667bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2660/2665 (99.8%) over 2667bp for offset 0 <== THIS IS REAL YER070W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER070W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/975 (0.4%). Conflicting: 5/975 (0.5%). NoInfo: 3/975 (0.3%). Certain keep: 963/975 (98.8%) ########################## YER072W (390bp = 130AA) has 6 hits (VTC1) Homolog of S. pombe Nrf1 (97% identica..4ts mutant (228) Spar (test2) orthologous hit at 94% f390/390 (100.0%) over 390bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f390/390 (100.0%) over 390bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f390/390 (100.0%) over 390bp for offset 0 <== THIS IS REAL YER072W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER072W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/976 (0.4%). Conflicting: 5/976 (0.5%). NoInfo: 3/976 (0.3%). Certain keep: 964/976 (98.8%) ########################## YER073W (1563bp = 521AA) has 25 hits (ALD5) mitochondrial Aldehyde Dehydrogenase Spar (test2) orthologous hit at 91% f1563/1563 (100.0%) over 1563bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1557/1560 (99.8%) over 1561bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1555/1561 (99.6%) over 1563bp for offset 0 <== THIS IS REAL YER073W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER073W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/977 (0.4%). Conflicting: 5/977 (0.5%). NoInfo: 3/977 (0.3%). Certain keep: 965/977 (98.8%) ########################## YER075C (2787bp = 929AA) has 316 hits (PTP3) Protein tyrosine phosphatase Spar (test2) non-orthologous hit at 87% f2135/2135 (100.0%) over 2135bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 76% f2297/2588 (88.8%) over 2616bp for offset 0 Smik (test3) Longest island has f97 at 82% over 2199bp <== THIS IS REAL Sbay (test2) orthologous hit at 59% f93/217 (42.9%) over 229bp for offset 2 Sbay (test3) Longest island has f73 at 65% over 71bp 0 100200300400 500600700800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k |__|__|__|__|___|__|__|__|___|__|__|__|__|___|__|__|__|___|__|__|__|___|__|__|__|__|___|__| 97f 82% 2199bp Sm616full |======================================================================>............> | 117375f 50% 20bp Sb95full ||||x|>.> | YER075C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YER075C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 4/978 (0.4%). Conflicting: 5/978 (0.5%). NoInfo: 3/978 (0.3%). Certain keep: 966/978 (98.8%) ########################## YER081W (1410bp = 470AA) has 11 hits (SER3) 3-phosphoglycerate dehydrogenase Spar (test2) orthologous hit at 92% f1410/1410 (100.0%) over 1410bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1405/1409 (99.7%) over 1410bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1410/1410 (100.0%) over 1410bp for offset 0 <== THIS IS REAL YER081W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER081W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/979 (0.4%). Conflicting: 5/979 (0.5%). NoInfo: 3/979 (0.3%). Certain keep: 967/979 (98.8%) ########################## YER082C (1665bp = 555AA) has 7 hits (KRE31) Hypothetical ORF Spar (test2) orthologous hit at 90% f1662/1662 (100.0%) over 1665bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1658/1663 (99.7%) over 1665bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1609/1658 (97.0%) over 1661bp for offset 0 <== THIS IS REAL YER082C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER082C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/980 (0.4%). Conflicting: 5/980 (0.5%). NoInfo: 3/980 (0.3%). Certain keep: 968/980 (98.8%) ########################## YER086W (1731bp = 577AA) has 5 hits (ILV1) threonine deaminase Spar (test2) orthologous hit at 93% f1731/1731 (100.0%) over 1731bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1731/1731 (100.0%) over 1731bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1723/1730 (99.6%) over 1731bp for offset 0 <== THIS IS REAL YER086W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER086W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/981 (0.4%). Conflicting: 5/981 (0.5%). NoInfo: 3/981 (0.3%). Certain keep: 969/981 (98.8%) ########################## YER087C-A (249bp = 83AA) has 12 hits (SBH1) homologous to Sbh2p Spar (test2) orthologous hit at 94% f249/249 (100.0%) over 249bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f249/249 (100.0%) over 249bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f248/248 (100.0%) over 248bp for offset 0 <== THIS IS REAL YER087C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER087C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/982 (0.4%). Conflicting: 5/982 (0.5%). NoInfo: 3/982 (0.3%). Certain keep: 970/982 (98.8%) ########################## YER088C (2013bp = 671AA) has 19 hits (DOT6) nuclear protein with Myb domain invo.. silencing (107) Spar (test2) orthologous hit at 89% f2010/2010 (100.0%) over 2013bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1070/1079 (99.2%) over 1081bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 64% f1179/1491 (79.1%) over 1532bp for offset 1 Sbay (test3) Longest island has f95 at 72% over 487bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 22k |___|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|___|____|| 95f 72% 487bp 89f 71% 235bp94f 75% 280bp Sb371full |....................|oooooooooooooooooooo>..|ooooooooo>..|oooooooooooo> | YER088C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER088C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/983 (0.4%). Conflicting: 5/983 (0.5%). NoInfo: 3/983 (0.3%). Certain keep: 971/983 (98.8%) ########################## YER089C (1395bp = 465AA) has 11 hits (PTC2) Protein phosphatase type 2C Spar (test2) orthologous hit at 92% f1395/1395 (100.0%) over 1395bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1385/1394 (99.4%) over 1395bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1157/1229 (94.1%) over 1235bp for offset 0 <== THIS IS REAL YER089C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER089C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/984 (0.4%). Conflicting: 5/984 (0.5%). NoInfo: 3/984 (0.3%). Certain keep: 972/984 (98.8%) ########################## YER090W (1524bp = 508AA) has 5 hits (TRP2) anthranilate synthase Component I Spar (test2) orthologous hit at 90% f1523/1523 (100.0%) over 1523bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1516/1522 (99.6%) over 1523bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1507/1513 (99.6%) over 1514bp for offset 0 <== THIS IS REAL YER090W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER090W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/985 (0.4%). Conflicting: 5/985 (0.5%). NoInfo: 3/985 (0.3%). Certain keep: 973/985 (98.8%) ########################## YER091C (2304bp = 768AA) has 9 hits (MET6) vitamin B12-(cobalamin)-independent i..ansferase) (253) Spar (test2) orthologous hit at 93% f2304/2304 (100.0%) over 2304bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f2304/2304 (100.0%) over 2304bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f2304/2304 (100.0%) over 2304bp for offset 0 <== THIS IS REAL YER091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/986 (0.4%). Conflicting: 5/986 (0.5%). NoInfo: 3/986 (0.3%). Certain keep: 974/986 (98.8%) ########################## YER092W (378bp = 126AA) has 9 hits (IES5) Ino Eighty Subunit 5 Spar (test2) orthologous hit at 85% f374/375 (99.7%) over 378bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f363/375 (96.8%) over 378bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f362/375 (96.5%) over 378bp for offset 0 <== THIS IS REAL YER092W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER092W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/987 (0.4%). Conflicting: 5/987 (0.5%). NoInfo: 3/987 (0.3%). Certain keep: 975/987 (98.8%) ########################## YER094C (618bp = 206AA) has 5 hits (PUP3) 20S proteasome subunit beta3_sc Spar (test2) orthologous hit at 97% f208/208 (100.0%) over 208bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 90% f618/618 (100.0%) over 618bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f613/617 (99.4%) over 618bp for offset 0 <== THIS IS REAL YER094C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER094C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/988 (0.4%). Conflicting: 5/988 (0.5%). NoInfo: 3/988 (0.3%). Certain keep: 976/988 (98.8%) ########################## YER095W (1203bp = 401AA) has 8 hits (RAD51) RecA homolog; Rad51p colocalizes to ..ast cancer (292) Spar (test2) orthologous hit at 93% f1202/1202 (100.0%) over 1202bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1048/1048 (100.0%) over 1048bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1094/1105 (99.0%) over 1110bp for offset 0 <== THIS IS REAL YER095W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER095W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/989 (0.4%). Conflicting: 5/989 (0.5%). NoInfo: 3/989 (0.3%). Certain keep: 977/989 (98.8%) ########################## YER096W (1539bp = 513AA) has 15 hits (SHC1) sporulation-specific homolog of csd4 Spar (test2) orthologous hit at 88% f1155/1158 (99.7%) over 1159bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f192/211 (91.0%) over 211bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1127/1144 (98.5%) over 1146bp for offset 0 <== THIS IS REAL YER096W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER096W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/990 (0.4%). Conflicting: 5/990 (0.5%). NoInfo: 3/990 (0.3%). Certain keep: 978/990 (98.8%) ########################## YER098W (2265bp = 755AA) has 34 hits (UBP9) ubiquitin carboxyl-terminal hydrolase Flanking ORFs are: YER095W and YER097W. YER098W skipped ########################## YER099C (957bp = 319AA) has 25 hits (PRS2) ribose-phosphate pyrophosphokinase 2 Spar (test2) orthologous hit at 91% f956/956 (100.0%) over 956bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f957/957 (100.0%) over 957bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f956/956 (100.0%) over 956bp for offset 0 <== THIS IS REAL YER099C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER099C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/991 (0.4%). Conflicting: 5/991 (0.5%). NoInfo: 3/991 (0.3%). Certain keep: 979/991 (98.8%) ########################## YER100W (753bp = 251AA) has 9 hits (UBC6) ubiquitin-conjugating enzyme Spar (test2) orthologous hit at 91% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f749/752 (99.6%) over 753bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f746/749 (99.6%) over 753bp for offset 0 <== THIS IS REAL YER100W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER100W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/992 (0.4%). Conflicting: 5/992 (0.5%). NoInfo: 3/992 (0.3%). Certain keep: 980/992 (98.8%) ########################## YER101C (1293bp = 431AA) has 8 hits (AST2) involved in targeting of plasma membr..[H+]ATPase (94) Spar (test2) orthologous hit at 90% f1291/1291 (100.0%) over 1291bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1290/1292 (99.8%) over 1293bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1286/1292 (99.5%) over 1293bp for offset 0 <== THIS IS REAL YER101C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER101C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/993 (0.4%). Conflicting: 5/993 (0.5%). NoInfo: 3/993 (0.3%). Certain keep: 981/993 (98.8%) ########################## YER102W (603bp = 201AA) has 11 hits (RPS8B) Ribosomal protein S8B (S14B) (rp19) (YS9) Spar (test2) orthologous hit at 98% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 95% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL YER102W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER102W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/994 (0.4%). Conflicting: 5/994 (0.5%). NoInfo: 3/994 (0.3%). Certain keep: 982/994 (98.8%) ########################## YER103W (1929bp = 643AA) has 68 hits (SSA4) member of 70 kDa heat shock protein family Spar (test2) orthologous hit at 91% f1929/1929 (100.0%) over 1929bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1929/1929 (100.0%) over 1929bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1924/1928 (99.8%) over 1929bp for offset 0 <== THIS IS REAL YER103W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER103W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/995 (0.4%). Conflicting: 5/995 (0.5%). NoInfo: 3/995 (0.3%). Certain keep: 983/995 (98.8%) ########################## YER104W (627bp = 209AA) has 8 hits (RTT105) Regulator of Ty1 Transposition Spar (test2) orthologous hit at 87% f617/617 (100.0%) over 617bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f587/587 (100.0%) over 587bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f599/622 (96.3%) over 627bp for offset 0 <== THIS IS REAL YER104W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER104W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/996 (0.4%). Conflicting: 5/996 (0.5%). NoInfo: 3/996 (0.3%). Certain keep: 984/996 (98.8%) ########################## YER105C (4176bp = 1392AA) has 27 hits (NUP157) Nucleoporin similar to Nup157p an..an Nup155p (102) Spar (test2) orthologous hit at 86% f4143/4169 (99.4%) over 4176bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f4072/4163 (97.8%) over 4176bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f3817/3953 (96.6%) over 3979bp for offset 2 <== THIS IS REAL YER105C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER105C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/997 (0.4%). Conflicting: 5/997 (0.5%). NoInfo: 3/997 (0.3%). Certain keep: 985/997 (98.8%) ########################## YER106W (909bp = 303AA) has 44 hits (MAM1) monopolin; involved in chromosome att..ic spindle (106) Spar (test2) orthologous hit at 83% f872/893 (97.6%) over 899bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f759/790 (96.1%) over 795bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f630/775 (81.3%) over 788bp for offset 2 Sbay (test3) Longest island has f93 at 72% over 669bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 9909 |________|_________|_________|_________|_________|_________|_________|_________|_________|| 93f 72% 669bp Sb371full |.....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.....> | YER106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/998 (0.4%). Conflicting: 5/998 (0.5%). NoInfo: 3/998 (0.3%). Certain keep: 986/998 (98.8%) ########################## YER107C (1098bp = 366AA) has 5 hits (GLE2) homologous to S. pombe RAE1 gene; 2-h..th Nup116p (168) Spar (test2) orthologous hit at 91% f1098/1098 (100.0%) over 1098bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1098/1098 (100.0%) over 1098bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1098/1098 (100.0%) over 1098bp for offset 0 <== THIS IS REAL YER107C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER107C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/999 (0.4%). Conflicting: 5/999 (0.5%). NoInfo: 3/999 (0.3%). Certain keep: 987/999 (98.8%) ########################## YER109C (2400bp = 800AA) has 202 hits (FLO8) putative transcriptional activator of FLO1 Spar (test2) orthologous hit at 85% f2286/2381 (96.0%) over 2386bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2264/2319 (97.6%) over 2324bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f2124/2294 (92.6%) over 2327bp for offset 0 <== THIS IS REAL YER109C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER109C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1000 (0.4%). Conflicting: 5/1000 (0.5%). NoInfo: 3/1000 (0.3%). Certain keep: 988/1000 (98.8%) ########################## YER110C (3342bp = 1114AA) has 12 hits (KAP123) Karyopherin beta 4 Spar (test2) orthologous hit at 92% f3342/3342 (100.0%) over 3342bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3342/3342 (100.0%) over 3342bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f3338/3341 (99.9%) over 3342bp for offset 0 <== THIS IS REAL YER110C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER110C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1001 (0.4%). Conflicting: 5/1001 (0.5%). NoInfo: 3/1001 (0.3%). Certain keep: 989/1001 (98.8%) ########################## YER111C (3282bp = 1094AA) has 494 hits (SWI4) transcription factor Spar (test2) orthologous hit at 77% f1430/1693 (84.5%) over 1728bp for offset 0 Spar (test3) Longest island has f99 at 89% over 1171bp <== THIS IS REAL Smik (test2) orthologous hit at 65% f1890/2672 (70.7%) over 2773bp for offset 0 Smik (test3) Longest island has f97 at 81% over 1193bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1386/1704 (81.3%) over 1743bp for offset 1 Sbay (test3) Longest island has f98 at 81% over 1147bp <== THIS IS REAL 0 10020030400500600708009001k 1k1k 1k 1k 1k1k 1k 1k 1k2k 2k 2k 2k2k 2k 2k 2k2k 2k 3k 3k3k 3k |_|__|__|_|__|__|__|_|__|__|__|_|__|__|__|_|__|__|__|_|__|__|__|_|__|__|__|_|__|__|__|_|__| 99f 89% 1171bp Sp333full |...............|===============================> | 97f 81% 1193bp Sm620full |.............................................|==============================|=> 98f 81% 1147bp Sb371full |.........|ooooooooooooooooooooooooooooooo>....> | YER111C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER111C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1002 (0.4%). Conflicting: 5/1002 (0.5%). NoInfo: 3/1002 (0.3%). Certain keep: 990/1002 (98.8%) ########################## YER112W (564bp = 188AA) has 382 hits (LSM4) U6 snRNA associated protein Spar (test2) orthologous hit at 89% f469/475 (98.7%) over 478bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f498/554 (89.9%) over 564bp for offset 1 Smik (test3) Longest island has f98 at 84% over 499bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f501/501 (100.0%) over 501bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 564 |______________|_______________|_______________|_______________|_______________|__________| 98f 84% 499bp Sm620full |==============================================================================>..........| YER112W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER112W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1003 (0.4%). Conflicting: 5/1003 (0.5%). NoInfo: 3/1003 (0.3%). Certain keep: 991/1003 (98.8%) ########################## YER114C (3123bp = 1041AA) has 35 hits (BOI2) involved in bud formation, has SH3 domain Spar (test2) orthologous hit at 87% f1992/1998 (99.7%) over 1998bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f3076/3110 (98.9%) over 3123bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2050/2105 (97.4%) over 2118bp for offset 0 <== THIS IS REAL YER114C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER114C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1004 (0.4%). Conflicting: 5/1004 (0.5%). NoInfo: 3/1004 (0.3%). Certain keep: 992/1004 (98.8%) ########################## YER115C (576bp = 192AA) has 4 hits (SPR6) involved in sporulation Spar (test2) orthologous hit at 87% f576/576 (100.0%) over 576bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f566/572 (99.0%) over 576bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f555/572 (97.0%) over 576bp for offset 0 <== THIS IS REAL YER115C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER115C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1005 (0.4%). Conflicting: 5/1005 (0.5%). NoInfo: 3/1005 (0.3%). Certain keep: 993/1005 (98.8%) ########################## YER116C (825bp = 275AA) has 10 hits (SLX8) Spar (test2) orthologous hit at 83% f808/817 (98.9%) over 825bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 71% f644/723 (89.1%) over 733bp for offset 2 Smik (test3) Longest island has f98 at 76% over 614bp <== THIS IS REAL Sbay (test2) orthologous hit at 73% f575/602 (95.5%) over 612bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800825 |_________|__________|__________|__________|__________|__________|__________|__________|__| 98f 76% 614bp Sm620full |..............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YER116C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER116C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1006 (0.4%). Conflicting: 5/1006 (0.5%). NoInfo: 3/1006 (0.3%). Certain keep: 994/1006 (98.8%) ########################## YER118C (1104bp = 368AA) has 12 hits (SHO1) Transmembrane osmosensor Spar (test2) orthologous hit at 91% f1104/1104 (100.0%) over 1104bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1100/1103 (99.7%) over 1104bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1101/1104 (99.7%) over 1104bp for offset 0 <== THIS IS REAL YER118C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER118C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1007 (0.4%). Conflicting: 5/1007 (0.5%). NoInfo: 3/1007 (0.3%). Certain keep: 995/1007 (98.8%) ########################## YER120W (735bp = 245AA) has 4 hits (SCS2) involved in inositol metabolism, regul..expression (103) Flanking ORFs are: YER117W and YER119C. YER120W skipped ########################## YER122C (1482bp = 494AA) has 22 hits (GLO3) Zinc-finger-containing protein with ..and Sps18p (110) Spar (test2) orthologous hit at 91% f1475/1481 (99.6%) over 1482bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1479/1482 (99.8%) over 1482bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1423/1465 (97.1%) over 1482bp for offset 0 <== THIS IS REAL YER122C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER122C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1008 (0.4%). Conflicting: 5/1008 (0.5%). NoInfo: 3/1008 (0.3%). Certain keep: 996/1008 (98.8%) ########################## YER123W (1575bp = 525AA) has 45 hits (YCK3) plasma membrane-bound casein kinase I homolog Spar (test2) orthologous hit at 92% f1575/1575 (100.0%) over 1575bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1575/1575 (100.0%) over 1575bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1557/1568 (99.3%) over 1575bp for offset 0 <== THIS IS REAL YER123W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER123W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1009 (0.4%). Conflicting: 5/1009 (0.5%). NoInfo: 3/1009 (0.3%). Certain keep: 997/1009 (98.8%) ########################## YER124C (1722bp = 574AA) has 9 hits (DSE1) Daughter Specific Expression 1 Spar (test2) orthologous hit at 89% f1719/1721 (99.9%) over 1722bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1705/1716 (99.4%) over 1722bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1524/1598 (95.4%) over 1612bp for offset 0 <== THIS IS REAL YER124C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER124C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1010 (0.4%). Conflicting: 5/1010 (0.5%). NoInfo: 3/1010 (0.3%). Certain keep: 998/1010 (98.8%) ########################## YER125W (2430bp = 810AA) has 14 hits (RSP5) Rsp5p encodes a hect (homologous to ..E3 enzyme) (148) Spar (test2) orthologous hit at 93% f2430/2430 (100.0%) over 2430bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2424/2427 (99.9%) over 2430bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f2430/2430 (100.0%) over 2430bp for offset 0 <== THIS IS REAL YER125W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER125W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1011 (0.4%). Conflicting: 5/1011 (0.5%). NoInfo: 3/1011 (0.3%). Certain keep: 999/1011 (98.8%) ########################## YER126C (786bp = 262AA) has 12 hits (NSA2) Spar (test2) orthologous hit at 94% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL YER126C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER126C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1012 (0.4%). Conflicting: 5/1012 (0.5%). NoInfo: 3/1012 (0.3%). Certain keep: 1000/1012 (98.8%) ########################## YER127W (1074bp = 358AA) has 16 hits (LCP5) involved in ribosomal RNA processing Spar (test2) orthologous hit at 91% f614/614 (100.0%) over 614bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1063/1068 (99.5%) over 1074bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1057/1072 (98.6%) over 1074bp for offset 0 <== THIS IS REAL YER127W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER127W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1013 (0.4%). Conflicting: 5/1013 (0.5%). NoInfo: 3/1013 (0.3%). Certain keep: 1001/1013 (98.8%) ########################## YER129W (3429bp = 1143AA) has 42 hits (PAK1) DNA polymerase alpha suppressing pr..ein kinase (92) Spar (test2) orthologous hit at 87% f3411/3427 (99.5%) over 3429bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f3363/3413 (98.5%) over 3429bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1748/1872 (93.4%) over 1884bp for offset 1 <== THIS IS REAL YER129W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER129W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1014 (0.4%). Conflicting: 5/1014 (0.5%). NoInfo: 3/1014 (0.3%). Certain keep: 1002/1014 (98.8%) ########################## YER131W (360bp = 120AA) has 9 hits (RPS26B) Ribosomal protein S26B Spar (test2) orthologous hit at 94% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL YER131W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER131W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1015 (0.4%). Conflicting: 5/1015 (0.5%). NoInfo: 3/1015 (0.3%). Certain keep: 1003/1015 (98.8%) ########################## YER132C (5262bp = 1754AA) has 29 hits (PMD1) negative regulator of early meiotic..expression (96) Spar (test2) orthologous hit at 88% f5244/5258 (99.7%) over 5262bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f4052/4144 (97.8%) over 4160bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2727/2763 (98.7%) over 2771bp for offset 0 <== THIS IS REAL YER132C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER132C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1016 (0.4%). Conflicting: 5/1016 (0.5%). NoInfo: 3/1016 (0.3%). Certain keep: 1004/1016 (98.8%) ########################## YER136W (1356bp = 452AA) has 7 hits (GDI1) GDP dissociation inhibitor Spar (test2) orthologous hit at 93% f1355/1355 (100.0%) over 1355bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1356/1356 (100.0%) over 1356bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1356/1356 (100.0%) over 1356bp for offset 0 <== THIS IS REAL YER136W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER136W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1017 (0.4%). Conflicting: 5/1017 (0.5%). NoInfo: 3/1017 (0.3%). Certain keep: 1005/1017 (98.8%) ########################## YER141W (1461bp = 487AA) has 4 hits (COX15) cytochrome oxidase assembly factor Spar (test2) orthologous hit at 89% f1461/1461 (100.0%) over 1461bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1461/1461 (100.0%) over 1461bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1460/1460 (100.0%) over 1460bp for offset 0 <== THIS IS REAL YER141W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER141W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1018 (0.4%). Conflicting: 5/1018 (0.5%). NoInfo: 3/1018 (0.3%). Certain keep: 1006/1018 (98.8%) ########################## YER142C (891bp = 297AA) has 11 hits (MAG1) 3-methyladenine DNA glycosylase Spar (test2) orthologous hit at 87% f888/890 (99.8%) over 891bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f867/887 (97.7%) over 891bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f883/890 (99.2%) over 891bp for offset 0 <== THIS IS REAL YER142C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER142C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1019 (0.4%). Conflicting: 5/1019 (0.5%). NoInfo: 3/1019 (0.3%). Certain keep: 1007/1019 (98.8%) ########################## YER143W (1287bp = 429AA) has 6 hits (DDI1) DNA Damage Inducible; binds to T- and.. complexes (99) Spar (test2) orthologous hit at 89% f1287/1287 (100.0%) over 1287bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1269/1283 (98.9%) over 1287bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1263/1283 (98.4%) over 1287bp for offset 0 <== THIS IS REAL YER143W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER143W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1020 (0.4%). Conflicting: 5/1020 (0.5%). NoInfo: 3/1020 (0.3%). Certain keep: 1008/1020 (98.8%) ########################## YER144C (2418bp = 806AA) has 22 hits (UBP5) Putative Ubiquitin-specific protease Spar (test2) orthologous hit at 86% f2415/2417 (99.9%) over 2418bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2384/2411 (98.9%) over 2418bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1261/1422 (88.7%) over 1435bp for offset 0 Sbay (test3) Longest island has f98 at 80% over 1219bp <== THIS IS REAL 0 100 200 300400 500 600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 22k |__|___|___|__|___|___|___|__|___|___|__|___|___|___|__|___|___|__|___|___|___|__|___|___|| 98f 80% 1219bp Sb369full |........|============================================| YER144C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER144C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1021 (0.4%). Conflicting: 5/1021 (0.5%). NoInfo: 3/1021 (0.3%). Certain keep: 1009/1021 (98.8%) ########################## YER145C (1215bp = 405AA) has 8 hits (FTR1) Iron permease Spar (test2) orthologous hit at 93% f1215/1215 (100.0%) over 1215bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1215/1215 (100.0%) over 1215bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1206/1213 (99.4%) over 1215bp for offset 0 <== THIS IS REAL YER145C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER145C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1022 (0.4%). Conflicting: 5/1022 (0.5%). NoInfo: 3/1022 (0.3%). Certain keep: 1010/1022 (98.8%) ########################## YER146W (282bp = 94AA) has 5 hits (LSM5) Sm-like protein Spar (test2) orthologous hit at 90% f282/282 (100.0%) over 282bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f282/282 (100.0%) over 282bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f281/281 (100.0%) over 281bp for offset 0 <== THIS IS REAL YER146W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER146W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1023 (0.4%). Conflicting: 5/1023 (0.5%). NoInfo: 3/1023 (0.3%). Certain keep: 1011/1023 (98.8%) ########################## YER147C (1875bp = 625AA) has 8 hits (SCC4) Spar (test2) orthologous hit at 88% f1598/1601 (99.8%) over 1601bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1862/1873 (99.4%) over 1875bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1140/1162 (98.1%) over 1164bp for offset 0 <== THIS IS REAL YER147C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER147C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1024 (0.4%). Conflicting: 5/1024 (0.5%). NoInfo: 3/1024 (0.3%). Certain keep: 1012/1024 (98.8%) ########################## YER148W (723bp = 241AA) has 6 hits (SPT15) TATA-binding protein (tfIId) Spar (test2) orthologous hit at 94% f723/723 (100.0%) over 723bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f723/723 (100.0%) over 723bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f723/723 (100.0%) over 723bp for offset 0 <== THIS IS REAL YER148W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER148W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1025 (0.4%). Conflicting: 5/1025 (0.5%). NoInfo: 3/1025 (0.3%). Certain keep: 1013/1025 (98.8%) ########################## YER149C (1263bp = 421AA) has 15 hits (PEA2) Protein with coiled-coil domain Spar (test2) orthologous hit at 87% f1263/1263 (100.0%) over 1263bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1241/1260 (98.5%) over 1263bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f769/773 (99.5%) over 774bp for offset 0 <== THIS IS REAL YER149C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER149C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1026 (0.4%). Conflicting: 5/1026 (0.5%). NoInfo: 3/1026 (0.3%). Certain keep: 1014/1026 (98.8%) ########################## YER150W (447bp = 149AA) has 14 hits (SPI1) similar to Sed1; highly expressed in ..nary phase (96) Spar (test2) orthologous hit at 89% f447/447 (100.0%) over 447bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f432/438 (98.6%) over 440bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f303/303 (100.0%) over 303bp for offset 0 <== THIS IS REAL YER150W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER150W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1027 (0.4%). Conflicting: 5/1027 (0.5%). NoInfo: 3/1027 (0.3%). Certain keep: 1015/1027 (98.8%) ########################## YER151C (2739bp = 913AA) has 42 hits (UBP3) Ubiquitin-specific protease Spar (test2) orthologous hit at 89% f446/447 (99.8%) over 447bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2432/2480 (98.1%) over 2495bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f2147/2363 (90.9%) over 2399bp for offset 1 <== THIS IS REAL YER151C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER151C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1028 (0.4%). Conflicting: 5/1028 (0.5%). NoInfo: 3/1028 (0.3%). Certain keep: 1016/1028 (98.8%) ########################## YER153C (765bp = 255AA) has 4 hits (PET122) translational activator of cytochrom..ubunit III (103) Spar (test2) orthologous hit at 89% f760/764 (99.5%) over 765bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f757/764 (99.1%) over 765bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f659/717 (91.9%) over 725bp for offset 0 <== THIS IS REAL YER153C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER153C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1029 (0.4%). Conflicting: 5/1029 (0.5%). NoInfo: 3/1029 (0.3%). Certain keep: 1017/1029 (98.8%) ########################## YER154W (1209bp = 403AA) has 6 hits (OXA1) involved in cytochrome c oxidase and ..e assembly (101) Spar (test2) orthologous hit at 91% f1209/1209 (100.0%) over 1209bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1209/1209 (100.0%) over 1209bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1199/1207 (99.3%) over 1209bp for offset 0 <== THIS IS REAL YER154W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER154W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1030 (0.4%). Conflicting: 5/1030 (0.5%). NoInfo: 3/1030 (0.3%). Certain keep: 1018/1030 (98.8%) ########################## YER155C (6504bp = 2168AA) has 51 hits (BEM2) Rho-type GTPase activating protein (GAP) Spar (test2) orthologous hit at 86% f6114/6455 (94.7%) over 6486bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f5921/5993 (98.8%) over 6004bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f5163/5286 (97.7%) over 5313bp for offset 0 <== THIS IS REAL YER155C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER155C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1031 (0.4%). Conflicting: 5/1031 (0.5%). NoInfo: 3/1031 (0.3%). Certain keep: 1019/1031 (98.8%) ########################## YER157W (2406bp = 802AA) has 17 hits (SEC34) Sec34p is a 92.5 kD protein that is..ely 480kD. (326) Spar (test2) orthologous hit at 88% f2406/2406 (100.0%) over 2406bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2375/2400 (99.0%) over 2405bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2356/2399 (98.2%) over 2406bp for offset 0 <== THIS IS REAL YER157W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER157W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1032 (0.4%). Conflicting: 5/1032 (0.5%). NoInfo: 3/1032 (0.3%). Certain keep: 1020/1032 (98.8%) ########################## YER159C (429bp = 143AA) has 6 hits (BUR6) Transcriptional regulator which functi..ry in vivo (157) Spar (test2) orthologous hit at 90% f429/429 (100.0%) over 429bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f429/429 (100.0%) over 429bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL YER159C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER159C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1033 (0.4%). Conflicting: 5/1033 (0.5%). NoInfo: 3/1033 (0.3%). Certain keep: 1021/1033 (98.8%) ########################## YER161C (1002bp = 334AA) has 96 hits (SPT2) non-specific DNA binding protein (sin1) Spar (test2) non-orthologous hit at 90% f1001/1001 (100.0%) over 1001bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f982/1000 (98.2%) over 1002bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f993/1001 (99.2%) over 1002bp for offset 0 <== THIS IS REAL YER161C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER161C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1034 (0.4%). Conflicting: 5/1034 (0.5%). NoInfo: 3/1034 (0.3%). Certain keep: 1022/1034 (98.8%) ########################## YER162C (2265bp = 755AA) has 34 hits (RAD4) Nucleotide excision repair protein Spar (test2) orthologous hit at 88% f529/533 (99.2%) over 534bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2239/2258 (99.2%) over 2265bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1076/1079 (99.7%) over 1080bp for offset 0 <== THIS IS REAL YER162C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER162C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1035 (0.4%). Conflicting: 5/1035 (0.5%). NoInfo: 3/1035 (0.3%). Certain keep: 1023/1035 (98.8%) ########################## YER164W (4407bp = 1469AA) has 325 hits (CHD1) transcriptional regulator Spar (test2) orthologous hit at 91% f4407/4407 (100.0%) over 4407bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f4396/4404 (99.8%) over 4405bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f4380/4398 (99.6%) over 4405bp for offset 0 <== THIS IS REAL YER164W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER164W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1036 (0.4%). Conflicting: 5/1036 (0.5%). NoInfo: 3/1036 (0.3%). Certain keep: 1024/1036 (98.8%) ########################## YER165W (1734bp = 578AA) has 21 hits (PAB1) Poly(A) binding protein, cytoplasmic..nd nuclear (92) Spar (test2) orthologous hit at 95% f1734/1734 (100.0%) over 1734bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 93% f1734/1734 (100.0%) over 1734bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f1734/1734 (100.0%) over 1734bp for offset 0 <== THIS IS REAL YER165W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER165W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1037 (0.4%). Conflicting: 5/1037 (0.5%). NoInfo: 3/1037 (0.3%). Certain keep: 1025/1037 (98.8%) ########################## YER166W (4716bp = 1572AA) has 52 hits (DNF1) Hypothetical ORF Spar (test2) orthologous hit at 92% f4698/4713 (99.7%) over 4716bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f4716/4716 (100.0%) over 4716bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1105/1126 (98.1%) over 1130bp for offset 0 <== THIS IS REAL YER166W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER166W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1038 (0.4%). Conflicting: 5/1038 (0.5%). NoInfo: 3/1038 (0.3%). Certain keep: 1026/1038 (98.8%) ########################## YER167W (2556bp = 852AA) has 13 hits (BCK2) Serine/threonine protein kinase Spar (test2) orthologous hit at 90% f2556/2556 (100.0%) over 2556bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2535/2547 (99.5%) over 2556bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2522/2543 (99.2%) over 2556bp for offset 0 <== THIS IS REAL YER167W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER167W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1039 (0.4%). Conflicting: 5/1039 (0.5%). NoInfo: 3/1039 (0.3%). Certain keep: 1027/1039 (98.8%) ########################## YER168C (1641bp = 547AA) has 10 hits (CCA1) tRNA nucleotidyltransferase (tRNA CC..phorylase) (100) Spar (test2) orthologous hit at 90% f1641/1641 (100.0%) over 1641bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1637/1640 (99.8%) over 1641bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1631/1637 (99.6%) over 1639bp for offset 0 <== THIS IS REAL YER168C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER168C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1040 (0.4%). Conflicting: 5/1040 (0.5%). NoInfo: 3/1040 (0.3%). Certain keep: 1028/1040 (98.8%) ########################## YER169W (2391bp = 797AA) has 19 hits (RPH1) Repressor of PHR1 transcription; bin..o PHR1 URS (94) Spar (test2) orthologous hit at 89% f2391/2391 (100.0%) over 2391bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2340/2386 (98.1%) over 2391bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1842/1970 (93.5%) over 1986bp for offset 0 <== THIS IS REAL YER169W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER169W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1041 (0.4%). Conflicting: 5/1041 (0.5%). NoInfo: 3/1041 (0.3%). Certain keep: 1029/1041 (98.8%) ########################## YER170W (678bp = 226AA) has 9 hits (ADK2) Adenylate kinase (mitochondrial GTP:AM..ansferase) (101) Spar (test2) orthologous hit at 88% f665/677 (98.2%) over 677bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f512/512 (100.0%) over 512bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f657/675 (97.3%) over 676bp for offset 0 <== THIS IS REAL YER170W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER170W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1042 (0.4%). Conflicting: 5/1042 (0.5%). NoInfo: 3/1042 (0.3%). Certain keep: 1030/1042 (98.8%) ########################## YER171W (2337bp = 779AA) (tdist=47.4k) has 26 hits (RAD3) DNA repair helicase co..n factor b (113) Spar (test2) orthologous hit at 92% f2318/2336 (99.2%) over 2337bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2321/2326 (99.8%) over 2330bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f2315/2333 (99.2%) over 2337bp for offset 0 <== THIS IS REAL YER171W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER171W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1043 (0.4%). Conflicting: 5/1043 (0.5%). NoInfo: 3/1043 (0.3%). Certain keep: 1031/1043 (98.8%) ########################## YER172C (6492bp = 2164AA) (tdist=40.8k) has 92 hits (BRR2) putative ATP-dependen..A helicase (94) Spar (test2) orthologous hit at 89% f6488/6491 (100.0%) over 6492bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f6433/6475 (99.4%) over 6491bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f6388/6462 (98.9%) over 6492bp for offset 0 <== THIS IS REAL YER172C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER172C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1044 (0.4%). Conflicting: 5/1044 (0.5%). NoInfo: 3/1044 (0.3%). Certain keep: 1032/1044 (98.9%) ########################## YER173W (1980bp = 660AA) (tdist=38.5k) has 16 hits (RAD24) (putative) cell cycle..xonuclease (92) Spar (test2) orthologous hit at 86% f1955/1971 (99.2%) over 1980bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1968/1978 (99.5%) over 1980bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1922/1969 (97.6%) over 1980bp for offset 0 <== THIS IS REAL YER173W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER173W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1045 (0.4%). Conflicting: 5/1045 (0.5%). NoInfo: 3/1045 (0.3%). Certain keep: 1033/1045 (98.9%) ########################## YER174C (735bp = 245AA) (tdist=37.7k) has 11 hits (GRX4) Protein with glutaredox..n activity (91) Spar (test2) orthologous hit at 90% f735/735 (100.0%) over 735bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f734/734 (100.0%) over 734bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f734/734 (100.0%) over 734bp for offset 0 <== THIS IS REAL YER174C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER174C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1046 (0.4%). Conflicting: 5/1046 (0.5%). NoInfo: 3/1046 (0.3%). Certain keep: 1034/1046 (98.9%) ########################## YER175C (900bp = 300AA) (tdist=36.5k) has 6 hits (TMT1) Hypothetical ORF Spar (test2) orthologous hit at 86% f900/900 (100.0%) over 900bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f882/897 (98.3%) over 900bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f892/898 (99.3%) over 900bp for offset 0 <== THIS IS REAL YER175C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER175C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1047 (0.4%). Conflicting: 5/1047 (0.5%). NoInfo: 3/1047 (0.3%). Certain keep: 1035/1047 (98.9%) ########################## YER176W (3366bp = 1122AA) (tdist=31.8k) has 32 hits (ECM32) DNA Helicase I Spar (test2) orthologous hit at 88% f3365/3366 (100.0%) over 3366bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2649/2859 (92.7%) over 2892bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2098/2109 (99.5%) over 2116bp for offset 0 <== THIS IS REAL YER176W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER176W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1048 (0.4%). Conflicting: 5/1048 (0.5%). NoInfo: 3/1048 (0.3%). Certain keep: 1036/1048 (98.9%) ########################## YER177W (804bp = 268AA) (tdist=30.4k) has 103 hits (BMH1) Homolog of mammalian 1..3 proteins (94) Spar (test2) orthologous hit at 93% f801/801 (100.0%) over 804bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f772/772 (100.0%) over 772bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f762/772 (98.7%) over 772bp for offset 0 <== THIS IS REAL YER177W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER177W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1049 (0.4%). Conflicting: 5/1049 (0.5%). NoInfo: 3/1049 (0.3%). Certain keep: 1037/1049 (98.9%) ########################## YER178W (1332bp = 444AA) (tdist=28.7k) has 4 hits (PDA1) alpha subunit of pyruva..(E1 alpha) (107) Spar (test2) orthologous hit at 92% f1328/1328 (100.0%) over 1328bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1328/1328 (100.0%) over 1328bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1290/1323 (97.5%) over 1328bp for offset 0 <== THIS IS REAL YER178W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER178W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1050 (0.4%). Conflicting: 5/1050 (0.5%). NoInfo: 3/1050 (0.3%). Certain keep: 1038/1050 (98.9%) ########################## YER180C (804bp = 268AA) (tdist=26.3k) has 6 hits (ISC10) involved in meoisis, sp.. formation (93) Spar (test2) non-orthologous hit at 88% f795/803 (99.0%) over 804bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 79% f775/799 (97.0%) over 804bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 76% f774/798 (97.0%) over 803bp for offset 0 <== THIS IS REAL YER180C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER180C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1051 (0.4%). Conflicting: 5/1051 (0.5%). NoInfo: 3/1051 (0.3%). Certain keep: 1039/1051 (98.9%) ########################## YER183C (636bp = 212AA) (tdist=22.9k) has 4 hits (FAU1) Hypothetical ORF Spar (test2) orthologous hit at 87% f630/634 (99.4%) over 635bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f631/634 (99.5%) over 635bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f625/633 (98.7%) over 635bp for offset 0 <== THIS IS REAL YER183C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YER183C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1052 (0.4%). Conflicting: 5/1052 (0.5%). NoInfo: 3/1052 (0.3%). Certain keep: 1040/1052 (98.9%) ########################## YER187W-A (594bp = 198AA) (tdist=10.6k) has 5 hits (KHS1) Killer toxin Flanking ORFs are: YER182W and YER184C. YER187W-A skipped ########################## YER190W (5046bp = 1682AA) (tdist=349) has 64 hits (YRF1-2) Y'-helicase protein 1 Flanking ORFs are: YER182W and YER184C. YER190W skipped ########################## YFL062W (1140bp = 380AA) (tdist=6.4k) has 71 hits (COS4) similar to subtelomeric..d proteins (101) Spar (test2) non-orthologous hit at 80% f1101/1132 (97.3%) over 1139bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f1090/1129 (96.5%) over 1139bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 66% f561/1128 (49.7%) over 1139bp for offset 2 Sbay (test3) Longest island has f97 at 65% over 444bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|_______|_______|_______|______|_______|___| 97f 65% 444bp 98f 71% 369bp Sb206full |.......................|==================================>.|xxxxxxxxxxxxxxxxxxxxxxxxxxxx| YFL062W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL062W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1053 (0.4%). Conflicting: 5/1053 (0.5%). NoInfo: 3/1053 (0.3%). Certain keep: 1041/1053 (98.9%) ########################## YFL060C (669bp = 223AA) (tdist=10.3k) has 24 hits (SNO3) member of the stationar..ene family (107) Spar (test2) non-orthologous hit at 87% f669/669 (100.0%) over 669bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 77% f636/652 (97.5%) over 652bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f647/665 (97.3%) over 668bp for offset 0 <== THIS IS REAL YFL060C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL060C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1054 (0.4%). Conflicting: 5/1054 (0.5%). NoInfo: 3/1054 (0.3%). Certain keep: 1042/1054 (98.9%) ########################## YFL059W (897bp = 299AA) (tdist=11.3k) has 20 hits (SNZ3) member of the stationar..ene family (107) Spar (test2) non-orthologous hit at 90% f893/896 (99.7%) over 897bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f897/897 (100.0%) over 897bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f691/796 (86.8%) over 798bp for offset 2 Sbay (test3) Longest island has f99 at 82% over 695bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 897 |_________|_________|_________|_________|_________|_________|_________|_________|_________| 99f 82% 695bp Sb837brk |=====================================================================>.........> | YFL059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1055 (0.4%). Conflicting: 5/1055 (0.5%). NoInfo: 3/1055 (0.3%). Certain keep: 1043/1055 (98.9%) ########################## YFL058W (1023bp = 341AA) (tdist=12.9k) has 30 hits (THI5) a thiamine regulated p..sis enzyme (119) Spar (test2) non-orthologous hit at 94% f1023/1023 (100.0%) over 1023bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 91% f758/758 (100.0%) over 758bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 88% f1015/1021 (99.4%) over 1023bp for offset 0 <== THIS IS REAL YFL058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1056 (0.4%). Conflicting: 5/1056 (0.5%). NoInfo: 3/1056 (0.3%). Certain keep: 1044/1056 (98.9%) ########################## YFL056C (639bp = 213AA) (tdist=14.7k) has 16 hits (AAD6) Hypothetical aryl-alcoh..nase (AAD) (102) Spar (test2) orthologous hit at 88% f517/639 (80.9%) over 639bp for offset 0 Spar (test3) Longest island has f100 at 87% over 517bp <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f512/638 (80.3%) over 639bp for offset 1 Smik (test3) Longest island has f99 at 82% over 516bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f512/638 (80.3%) over 639bp for offset 0 Sbay (test3) Longest island has f99 at 79% over 516bp <== THIS IS REAL 0 100 200 300 400 500 600 639 |_____________|_____________|_____________|_____________|_____________|_____________|_____| 100f 87% 517bp Sp345full |=======================================================================>.................| 99f 82% 516bp Sm1143ful |=======================================================================>.................| 99f 79% 516bp Sb206full |=======================================================================>.................| YFL056C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL056C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1057 (0.4%). Conflicting: 5/1057 (0.5%). NoInfo: 3/1057 (0.3%). Certain keep: 1045/1057 (98.9%) ########################## YFL055W (1677bp = 559AA) (tdist=17.0k) has 20 hits (AGP3) Amino acid permease Spar (test2) orthologous hit at 89% f1674/1676 (99.9%) over 1677bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 65% f738/1630 (45.3%) over 1670bp for offset 0 Smik (test3) Longest island has f97 at 68% over 546bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 55% f337/627 (53.7%) over 657bp for offset 2 Sbay (test3) Longest island has f82 at 61% over 178bp Sbay (test2) non-orthologous hit at 55% f407/591 (68.9%) over 616bp for offset 0 Sbay (test3) Longest island has f83 at 54% over 197bp Sbay (test2) non-orthologous hit at 57% f368/540 (68.1%) over 562bp for offset 0 Sbay (test3) Longest island has f86 at 62% over 94bp Sbay (test2) non-orthologous hit at 55% f156/302 (51.7%) over 314bp for offset 2 Sbay (test3) Longest island has f87 at 50% over 105bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|_____|____|____|_____|____|____|_____|____|_____|____|____|_____|____|____|____| 97f 68% 546bp 93f 68% 247bp Sm1154ful |...........................................|xxxxxxxxxxxxxxxxxxxxxxxxxxxx>..|=============| 10082f 61% 178bp 77f71f 57% 89bp Sb698full |.|==|ooooooooo>.......|o>|oooo>....> | 83f 54% 197b82f 60% 1100f 50%100f 58% 67bp Sb109brk |..|xxxxxxxxx>.|xxxxxx>.|x>.....|xx> | 86f 62% 85f 77f 6174f 586f 57% 93bp Sb280full |oooo>..|oo>|oo>..|oo>.|oooo>.> | 87f 50%90f 55%100f 56% 25bp Sb64brk ||xxxx>.|oo>xxx|>> | YFL055W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YFL055W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 4/1058 (0.4%). Conflicting: 5/1058 (0.5%). NoInfo: 3/1058 (0.3%). Certain keep: 1046/1058 (98.9%) ########################## YFL053W (1776bp = 592AA) (tdist=23.4k) has 14 hits (DAK2) dihydroxyacetone kinase Spar (test2) orthologous hit at 93% f1776/1776 (100.0%) over 1776bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1776/1776 (100.0%) over 1776bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1765/1773 (99.5%) over 1775bp for offset 0 <== THIS IS REAL YFL053W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL053W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1059 (0.4%). Conflicting: 5/1059 (0.5%). NoInfo: 3/1059 (0.3%). Certain keep: 1047/1059 (98.9%) ########################## YFL050C (2577bp = 859AA) (tdist=33.2k) has 31 hits (ALR2) (putative) ion transporter Spar (test2) orthologous hit at 81% f2520/2564 (98.3%) over 2577bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f2201/2289 (96.2%) over 2301bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1840/1919 (95.9%) over 1932bp for offset 0 <== THIS IS REAL YFL050C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL050C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1060 (0.4%). Conflicting: 5/1060 (0.5%). NoInfo: 3/1060 (0.3%). Certain keep: 1048/1060 (98.9%) ########################## YFL048C (1338bp = 446AA) (tdist=38.8k) has 15 hits (EMP47) 47 kDa type I transme.. the Golgi (117) Spar (test2) orthologous hit at 90% f1328/1335 (99.5%) over 1337bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1326/1335 (99.3%) over 1337bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1314/1331 (98.7%) over 1338bp for offset 0 <== THIS IS REAL YFL048C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL048C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1061 (0.4%). Conflicting: 5/1061 (0.5%). NoInfo: 3/1061 (0.3%). Certain keep: 1049/1061 (98.9%) ########################## YFL047W (2145bp = 715AA) (tdist=40.4k) has 7 hits (RGD2) specific GTPase activat..n (RhoGAP) (100) Spar (test2) orthologous hit at 90% f2137/2142 (99.8%) over 2143bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2136/2143 (99.7%) over 2145bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2125/2140 (99.3%) over 2145bp for offset 0 <== THIS IS REAL YFL047W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL047W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1062 (0.4%). Conflicting: 5/1062 (0.5%). NoInfo: 3/1062 (0.3%). Certain keep: 1050/1062 (98.9%) ########################## YFL045C (765bp = 255AA) (tdist=43.6k) has 6 hits (SEC53) phosphomannomutase Spar (test2) orthologous hit at 92% f764/764 (100.0%) over 764bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f765/765 (100.0%) over 765bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f758/763 (99.3%) over 764bp for offset 0 <== THIS IS REAL YFL045C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL045C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1063 (0.4%). Conflicting: 5/1063 (0.5%). NoInfo: 3/1063 (0.3%). Certain keep: 1051/1063 (98.9%) ########################## YFL041W (1869bp = 623AA) (tdist=49.1k) has 20 hits (FET5) multicopper oxidase, t..ne protein (111) Spar (test2) orthologous hit at 90% f1869/1869 (100.0%) over 1869bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1865/1865 (100.0%) over 1865bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1865/1868 (99.8%) over 1869bp for offset 0 <== THIS IS REAL YFL041W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL041W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1064 (0.4%). Conflicting: 5/1064 (0.5%). NoInfo: 3/1064 (0.3%). Certain keep: 1052/1064 (98.9%) ########################## YFL038C (621bp = 207AA) has 27 hits (YPT1) Ras-like GTP-binding protein; most si..1A protein (112) Spar (test2) orthologous hit at 92% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL YFL038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1065 (0.4%). Conflicting: 5/1065 (0.5%). NoInfo: 3/1065 (0.3%). Certain keep: 1053/1065 (98.9%) ########################## YFL037W (1374bp = 458AA) has 16 hits (TUB2) beta-tubulin Spar (test2) orthologous hit at 94% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL YFL037W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL037W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1066 (0.4%). Conflicting: 5/1066 (0.5%). NoInfo: 3/1066 (0.3%). Certain keep: 1054/1066 (98.9%) ########################## YFL036W (4056bp = 1352AA) has 15 hits (RPO41) mitohcondrial RNA polymerase Spar (test2) orthologous hit at 90% f4056/4056 (100.0%) over 4056bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f4036/4053 (99.6%) over 4056bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3133/3147 (99.6%) over 3150bp for offset 0 <== THIS IS REAL YFL036W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL036W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1067 (0.4%). Conflicting: 5/1067 (0.5%). NoInfo: 3/1067 (0.3%). Certain keep: 1055/1067 (98.9%) ########################## YFL033C (5313bp = 1771AA) has 337 hits (RIM15) Trehalose-associated protein kina..ombe cek1+ (108) Spar (test2) orthologous hit at 90% f4273/4284 (99.7%) over 4286bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f4248/4258 (99.8%) over 4262bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3667/3879 (94.5%) over 3903bp for offset 0 <== THIS IS REAL YFL033C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL033C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1068 (0.4%). Conflicting: 5/1068 (0.5%). NoInfo: 3/1068 (0.3%). Certain keep: 1056/1068 (98.9%) ########################## YFL029C (1107bp = 369AA) has 12 hits (CAK1) Cyclin-dependent kinase-activating kinase Spar (test2) orthologous hit at 86% f1094/1102 (99.3%) over 1107bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1065/1099 (96.9%) over 1107bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1062/1099 (96.6%) over 1107bp for offset 0 <== THIS IS REAL YFL029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1069 (0.4%). Conflicting: 5/1069 (0.5%). NoInfo: 3/1069 (0.3%). Certain keep: 1057/1069 (98.9%) ########################## YFL028C (870bp = 290AA) has 13 hits (CAF16) ABC ATPase Spar (test2) orthologous hit at 90% f869/869 (100.0%) over 869bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f865/868 (99.7%) over 869bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f869/869 (100.0%) over 869bp for offset 0 <== THIS IS REAL YFL028C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL028C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1070 (0.4%). Conflicting: 5/1070 (0.5%). NoInfo: 3/1070 (0.3%). Certain keep: 1058/1070 (98.9%) ########################## YFL027C (1494bp = 498AA) has 8 hits (GYP8) Hypothetical ORF Spar (test2) orthologous hit at 88% f1494/1494 (100.0%) over 1494bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1487/1491 (99.7%) over 1493bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1468/1486 (98.8%) over 1493bp for offset 0 <== THIS IS REAL YFL027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1071 (0.4%). Conflicting: 5/1071 (0.5%). NoInfo: 3/1071 (0.3%). Certain keep: 1059/1071 (98.9%) ########################## YFL026W (1296bp = 432AA) has 7 hits (STE2) alpha-factor pheromone receptor; seve..in protein (110) Spar (test2) orthologous hit at 90% f1296/1296 (100.0%) over 1296bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1288/1295 (99.5%) over 1296bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1272/1293 (98.4%) over 1296bp for offset 0 <== THIS IS REAL YFL026W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL026W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1072 (0.4%). Conflicting: 5/1072 (0.5%). NoInfo: 3/1072 (0.3%). Certain keep: 1060/1072 (98.9%) ########################## YFL025C (3090bp = 1030AA) has 9 hits (BST1) negative regulator of COPII vesicle formation Spar (test2) orthologous hit at 88% f3087/3087 (100.0%) over 3090bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2767/2900 (95.4%) over 2922bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f3024/3077 (98.3%) over 3089bp for offset 0 <== THIS IS REAL YFL025C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL025C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1073 (0.4%). Conflicting: 5/1073 (0.5%). NoInfo: 3/1073 (0.3%). Certain keep: 1061/1073 (98.9%) ########################## YFL024C (2499bp = 833AA) has 776 hits (EPL1) Probable chromatin protein because ..f Polycomb (126) Spar (test2) orthologous hit at 89% f2409/2490 (96.7%) over 2497bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2418/2488 (97.2%) over 2494bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2382/2398 (99.3%) over 2401bp for offset 1 <== THIS IS REAL YFL024C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL024C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1074 (0.4%). Conflicting: 5/1074 (0.5%). NoInfo: 3/1074 (0.3%). Certain keep: 1062/1074 (98.9%) ########################## YFL023W (2391bp = 797AA) has 113 hits (FYV11) Hypothetical ORF Spar (test2) orthologous hit at 80% f1631/1747 (93.4%) over 1763bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 72% f1496/1689 (88.6%) over 1709bp for offset 0 Smik (test3) Longest island has f93 at 74% over 1592bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f629/723 (87.0%) over 737bp for offset 1 Sbay (test3) Longest island has f97 at 77% over 574bp <== THIS IS REAL 0 100 200 300 400500 600 700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k |__|___|___|___|__|___|___|___|__|___|___|___|__|___|___|___|__|___|___|___|___|__|___|___| 93f 74% 1592bp Sm514full |==========================================================>....> | 97f 77% 574bp Sb782brk |.....|ooooooooooooooooooooo| YFL023W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL023W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1075 (0.4%). Conflicting: 5/1075 (0.5%). NoInfo: 3/1075 (0.3%). Certain keep: 1063/1075 (98.9%) ########################## YFL022C (1512bp = 504AA) has 7 hits (FRS2) Phenylalanyl-tRNA synthetase, beta su..ytoplasmic (98) Spar (test2) orthologous hit at 92% f1512/1512 (100.0%) over 1512bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1512/1512 (100.0%) over 1512bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f365/365 (100.0%) over 365bp for offset 0 <== THIS IS REAL YFL022C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL022C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1076 (0.4%). Conflicting: 5/1076 (0.5%). NoInfo: 3/1076 (0.3%). Certain keep: 1064/1076 (98.9%) ########################## YFL021W (1533bp = 511AA) has 125 hits (GAT1) transcriptional activator with GATA..ding motif (115) Spar (test2) orthologous hit at 83% f873/950 (91.9%) over 956bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f893/915 (97.6%) over 923bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 54% f192/526 (36.5%) over 559bp for offset 0 Sbay (test3) Longest island has f73 at 60% over 143bp Sbay (test2) non-orthologous hit at 71% f265/343 (77.3%) over 352bp for offset 2 Sbay (test3) Longest island has f90 at 76% over 286bp Sbay (test2) non-orthologous hit at 57% f146/346 (42.2%) over 366bp for offset 2 Sbay (test3) Longest island has f100 at 74% over 57bp Sbay (test2) non-orthologous hit at 69% f196/269 (72.9%) over 281bp for offset 0 Sbay (test3) Longest island has f98 at 76% over 188bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k1k |____|_____|_____|_____|_____|_____|_____|____|_____|_____|_____|_____|_____|_____|_____|_| 73f 60% 143bp 82f 578f76f 55% 97bp Sb668full |=======>......|oo>.|xx|ooooo>...> | 90f 76% 286bp Sb37brk |================>...> | 10072f 8988f 72f 62% 53bp Sb301full |.|xx|==>|o|=>.|xx>..> | 74f70f98f 76% 188Sb37brk |==|x>|oooooooooo| YFL021W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YFL021W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 4/1077 (0.4%). Conflicting: 5/1077 (0.5%). NoInfo: 3/1077 (0.3%). Certain keep: 1065/1077 (98.9%) ########################## YFL020C (369bp = 123AA) has 96 hits (PAU5) member of the seripauperin (PAU) family Spar (test2) orthologous hit at 87% f264/363 (72.7%) over 369bp for offset 1 Spar (test3) Longest island has f100 at 89% over 262bp Smik (test2) orthologous hit at 81% f127/127 (100.0%) over 127bp for offset 0 Smik (test3) Longest island has f100 at 81% over 127bp Sbay (test2) orthologous hit at 84% f281/281 (100.0%) over 281bp for offset 0 <== THIS IS REAL 0 100 200 300 369 |_______________________|_______________________|________________________|________________| 100f 89% 262bp Sp344full |.........................|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| 100f 81% 127bp Sm514brk |==============================> | YFL020C: kill: - keep: Sbay Not a single protein hit, and yet, certain keep YFL020C - Certain Keep. Kill and Keep Sbay Current total: Certain kills: 4/1078 (0.4%). Conflicting: 5/1078 (0.5%). NoInfo: 3/1078 (0.3%). Certain keep: 1066/1078 (98.9%) ########################## YFL018C (1500bp = 500AA) has 7 hits (LPD1) dihydrolipoamide dehydrogenase precur..complexes) (162) Spar (test2) orthologous hit at 91% f1500/1500 (100.0%) over 1500bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1500/1500 (100.0%) over 1500bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1495/1499 (99.7%) over 1500bp for offset 0 <== THIS IS REAL YFL018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1079 (0.4%). Conflicting: 5/1079 (0.5%). NoInfo: 3/1079 (0.3%). Certain keep: 1067/1079 (98.9%) ########################## YFL017W-A (234bp = 78AA) has 10 hits (SMX2) snRNP G protein (the homologue of th..uman Sm-G) (93) Spar (test2) orthologous hit at 92% f234/234 (100.0%) over 234bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f234/234 (100.0%) over 234bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f234/234 (100.0%) over 234bp for offset 0 <== THIS IS REAL YFL017W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL017W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1080 (0.4%). Conflicting: 5/1080 (0.5%). NoInfo: 3/1080 (0.3%). Certain keep: 1068/1080 (98.9%) ########################## YFL017C (480bp = 160AA) has 4 hits (GNA1) glucosamine-phosphate N-acetyltransferase Spar (test2) orthologous hit at 90% f480/480 (100.0%) over 480bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f480/480 (100.0%) over 480bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f480/480 (100.0%) over 480bp for offset 0 <== THIS IS REAL YFL017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1081 (0.4%). Conflicting: 5/1081 (0.5%). NoInfo: 3/1081 (0.3%). Certain keep: 1069/1081 (98.9%) ########################## YFL016C (1536bp = 512AA) has 24 hits (MDJ1) DnaJ homolog involved in mitochondri..in folding (113) Spar (test2) orthologous hit at 90% f1524/1532 (99.5%) over 1536bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1520/1531 (99.3%) over 1536bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f996/1011 (98.5%) over 1016bp for offset 0 <== THIS IS REAL YFL016C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL016C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1082 (0.4%). Conflicting: 5/1082 (0.5%). NoInfo: 3/1082 (0.3%). Certain keep: 1070/1082 (98.9%) ########################## YFL014W (330bp = 110AA) has 4 hits (HSP12) 12 kDa heat shock protein Spar (test2) orthologous hit at 95% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f319/326 (97.9%) over 330bp for offset 0 <== THIS IS REAL YFL014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1083 (0.4%). Conflicting: 5/1083 (0.5%). NoInfo: 3/1083 (0.3%). Certain keep: 1071/1083 (98.9%) ########################## YFL013C (2079bp = 693AA) has 19 hits (IES1) Hypothetical ORF Flanking ORFs are: YFL015C and YFL013C. YFL013C skipped ########################## YFL011W (1641bp = 547AA) has 99 hits (HXT10) high-affinity hexose transporter Spar (test2) orthologous hit at 89% f1634/1640 (99.6%) over 1641bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1621/1638 (99.0%) over 1640bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1640/1640 (100.0%) over 1640bp for offset 0 <== THIS IS REAL YFL011W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL011W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1084 (0.4%). Conflicting: 5/1084 (0.5%). NoInfo: 3/1084 (0.3%). Certain keep: 1072/1084 (98.9%) ########################## YFL010W-A (285bp = 95AA) has 13 hits (AUA1) involved in ammonia regulation of Ga..d permease (113) Flanking ORFs are: YFL012W and YFL010W-A. YFL010W-A skipped ########################## YFL010C (636bp = 212AA) has 20 hits (WWM1) Hypothetical ORF Flanking ORFs are: YFL012W and YFL010W-A. YFL010C skipped ########################## YFL009W (2340bp = 780AA) has 14 hits (CDC4) part of a ubiquitin ligase complex Spar (test2) orthologous hit at 90% f2333/2334 (100.0%) over 2340bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1886/1898 (99.4%) over 1900bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1886/1892 (99.7%) over 1896bp for offset 0 <== THIS IS REAL YFL009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1085 (0.4%). Conflicting: 5/1085 (0.5%). NoInfo: 3/1085 (0.3%). Certain keep: 1073/1085 (98.9%) ########################## YFL008W (3678bp = 1226AA) has 157 hits (SMC1) SMC chromosomal ATPase family member Spar (test2) orthologous hit at 90% f3459/3464 (99.9%) over 3465bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3459/3464 (99.9%) over 3465bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3445/3461 (99.5%) over 3465bp for offset 0 <== THIS IS REAL YFL008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1086 (0.4%). Conflicting: 5/1086 (0.5%). NoInfo: 3/1086 (0.3%). Certain keep: 1074/1086 (98.9%) ########################## YFL007W (5415bp = 1805AA) has 17 hits (BLM3) Involved in protecting the cell aga..cin damage (101) Spar (test2) orthologous hit at 90% f5393/5414 (99.6%) over 5415bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3086/4599 (67.1%) over 4603bp for offset 0 Smik (test3) Longest island has f99 at 86% over 1594bp <== THIS IS REAL Sbay (test2) orthologous hit at 82% f5353/5405 (99.0%) over 5415bp for offset 1 <== THIS IS REAL 01023040560708901k11k1k11k1k11k1k22k2k22k2k22k2k23k3k33k3k33k3k33k4k44k4k44k4k44k4k55k5k555k ||_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||| 100f 86% 1511bp 99f 86% 1594bp 100f 84% 1478bp Sm515brk |========================|==========================|ooooooooooooooooooooooo> | YFL007W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL007W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1087 (0.4%). Conflicting: 5/1087 (0.5%). NoInfo: 3/1087 (0.3%). Certain keep: 1075/1087 (98.9%) ########################## YFL005W (648bp = 216AA) has 32 hits (SEC4) Ras-like small GTP-binding protein Spar (test2) orthologous hit at 94% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL YFL005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1088 (0.4%). Conflicting: 5/1088 (0.5%). NoInfo: 3/1088 (0.3%). Certain keep: 1076/1088 (98.9%) ########################## YFL004W (2487bp = 829AA) has 37 hits (VTC2) polyphosphate synthetase (putative) Spar (test2) orthologous hit at 92% f2486/2486 (100.0%) over 2486bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2486/2486 (100.0%) over 2486bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2454/2465 (99.6%) over 2479bp for offset 0 <== THIS IS REAL YFL004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1089 (0.4%). Conflicting: 5/1089 (0.5%). NoInfo: 3/1089 (0.3%). Certain keep: 1077/1089 (98.9%) ########################## YFL003C (2637bp = 879AA) has 26 hits (MSH4) meiosis specific protein, E.coli Mut..hromosomes (141) Spar (test2) orthologous hit at 90% f2637/2637 (100.0%) over 2637bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2633/2636 (99.9%) over 2637bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2604/2633 (98.9%) over 2637bp for offset 0 <== THIS IS REAL YFL003C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL003C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1090 (0.4%). Conflicting: 5/1090 (0.5%). NoInfo: 3/1090 (0.3%). Certain keep: 1078/1090 (98.9%) ########################## YFL002C (1821bp = 607AA) has 134 hits (SPB4) ATP-dependent RNA helicase Spar (test2) orthologous hit at 89% f1821/1821 (100.0%) over 1821bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1821/1821 (100.0%) over 1821bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1821/1821 (100.0%) over 1821bp for offset 0 <== THIS IS REAL YFL002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1091 (0.4%). Conflicting: 5/1091 (0.5%). NoInfo: 3/1091 (0.3%). Certain keep: 1079/1091 (98.9%) ########################## YFL001W (1329bp = 443AA) has 8 hits (DEG1) Depressed growth-rate protein Spar (test2) orthologous hit at 89% f1329/1329 (100.0%) over 1329bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1325/1328 (99.8%) over 1329bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1315/1327 (99.1%) over 1329bp for offset 2 <== THIS IS REAL YFL001W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFL001W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1092 (0.4%). Conflicting: 5/1092 (0.5%). NoInfo: 3/1092 (0.3%). Certain keep: 1080/1092 (98.9%) ########################## YFR001W (615bp = 205AA) has 58 hits (LOC1) Double-stranded RNA-binding protein Spar (test2) orthologous hit at 91% f614/614 (100.0%) over 614bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f614/614 (100.0%) over 614bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f614/614 (100.0%) over 614bp for offset 0 <== THIS IS REAL YFR001W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR001W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1093 (0.4%). Conflicting: 5/1093 (0.5%). NoInfo: 3/1093 (0.3%). Certain keep: 1081/1093 (98.9%) ########################## YFR002W (2520bp = 840AA) has 23 hits (NIC96) 96 kDa nucleoporin-interacting component Spar (test2) orthologous hit at 91% f2520/2520 (100.0%) over 2520bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2520/2520 (100.0%) over 2520bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2498/2517 (99.2%) over 2520bp for offset 0 <== THIS IS REAL YFR002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1094 (0.4%). Conflicting: 5/1094 (0.5%). NoInfo: 3/1094 (0.3%). Certain keep: 1082/1094 (98.9%) ########################## YFR004W (921bp = 307AA) has 15 hits (RPN11) Similar to S. pombe PAD1 gene product Spar (test2) orthologous hit at 93% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f920/920 (100.0%) over 920bp for offset 0 <== THIS IS REAL YFR004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1095 (0.4%). Conflicting: 5/1095 (0.5%). NoInfo: 3/1095 (0.3%). Certain keep: 1083/1095 (98.9%) ########################## YFR005C (1347bp = 449AA) has 7 hits (SAD1) Product of gene unknown Spar (test2) orthologous hit at 88% f1341/1346 (99.6%) over 1347bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1336/1345 (99.3%) over 1347bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1295/1336 (96.9%) over 1343bp for offset 0 <== THIS IS REAL YFR005C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR005C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1096 (0.4%). Conflicting: 5/1096 (0.5%). NoInfo: 3/1096 (0.3%). Certain keep: 1084/1096 (98.9%) ########################## YFR009W (2259bp = 753AA) has 46 hits (GCN20) Member of ATP-binding cassette (ABC..f proteins (100) Spar (test2) orthologous hit at 91% f2257/2257 (100.0%) over 2257bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2257/2257 (100.0%) over 2257bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2242/2254 (99.5%) over 2257bp for offset 0 <== THIS IS REAL YFR009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1097 (0.4%). Conflicting: 5/1097 (0.5%). NoInfo: 3/1097 (0.3%). Certain keep: 1085/1097 (98.9%) ########################## YFR010W (1500bp = 500AA) has 19 hits (UBP6) (putative) ubiquitin-specific protease Spar (test2) orthologous hit at 93% f1500/1500 (100.0%) over 1500bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1495/1499 (99.7%) over 1500bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1496/1499 (99.8%) over 1500bp for offset 0 <== THIS IS REAL YFR010W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR010W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1098 (0.4%). Conflicting: 5/1098 (0.5%). NoInfo: 3/1098 (0.3%). Certain keep: 1086/1098 (98.9%) ########################## YFR013W (2364bp = 788AA) has 43 hits (IOC3) ISWI One Complex Spar (test2) orthologous hit at 89% f2306/2319 (99.4%) over 2321bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2321/2322 (100.0%) over 2322bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2136/2299 (92.9%) over 2321bp for offset 0 <== THIS IS REAL YFR013W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR013W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1099 (0.4%). Conflicting: 5/1099 (0.5%). NoInfo: 3/1099 (0.3%). Certain keep: 1087/1099 (98.9%) ########################## YFR014C (1341bp = 447AA) has 49 hits (CMK1) Calmodulin-dependent protein kinase Spar (test2) orthologous hit at 89% f1334/1340 (99.6%) over 1341bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1331/1339 (99.4%) over 1341bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1321/1330 (99.3%) over 1334bp for offset 0 <== THIS IS REAL YFR014C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR014C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1100 (0.4%). Conflicting: 5/1100 (0.5%). NoInfo: 3/1100 (0.3%). Certain keep: 1088/1100 (98.9%) ########################## YFR015C (2127bp = 709AA) has 11 hits (GSY1) Glycogen synthase (UDP-gluocse--star..ansferase) (103) Spar (test2) orthologous hit at 92% f2127/2127 (100.0%) over 2127bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2120/2123 (99.9%) over 2127bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2103/2123 (99.1%) over 2127bp for offset 0 <== THIS IS REAL YFR015C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR015C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1101 (0.4%). Conflicting: 5/1101 (0.5%). NoInfo: 3/1101 (0.3%). Certain keep: 1089/1101 (98.9%) ########################## YFR019W (6837bp = 2279AA) has 588 hits (FAB1) type II PI(4)P5-kinase (PIP4,5 kin..n PIP5K-II (110) Spar (test2) orthologous hit at 88% f5742/5781 (99.3%) over 5793bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f3804/4261 (89.3%) over 4323bp for offset 0 Smik (test3) Longest island has f99 at 84% over 3144bp <== THIS IS REAL Sbay (test2) orthologous hit at 67% f244/255 (95.7%) over 255bp for offset 1 <== THIS IS REAL 0123045607890111k111k111k1222k222k222k233k333k333k3344k444k444k445k555k555k5556k666k666k666k ||||_|||_|||_|||_|||_|||_||||_|||_|||_|||_|||_|||_||||_|||_|||_|||_|||_|||_||||_|||_|||_||| 99f 84% 3144bp 100f 87% 328bp Sm268full |....|========================================>......|===> | YFR019W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR019W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1102 (0.4%). Conflicting: 5/1102 (0.5%). NoInfo: 3/1102 (0.3%). Certain keep: 1090/1102 (98.9%) ########################## YFR021W (1503bp = 501AA) has 7 hits (AUT10) Hypothetical ORF Spar (test2) orthologous hit at 92% f1503/1503 (100.0%) over 1503bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1500/1500 (100.0%) over 1503bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1487/1500 (99.1%) over 1503bp for offset 0 <== THIS IS REAL YFR021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1103 (0.4%). Conflicting: 5/1103 (0.5%). NoInfo: 3/1103 (0.3%). Certain keep: 1091/1103 (98.9%) ########################## YFR023W (1836bp = 612AA) has 45 hits (PES4) poly(A) binding protein; related to ..og YHR015w (108) Spar (test2) orthologous hit at 91% f1836/1836 (100.0%) over 1836bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1827/1835 (99.6%) over 1836bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1802/1831 (98.4%) over 1836bp for offset 0 <== THIS IS REAL YFR023W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR023W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1104 (0.4%). Conflicting: 5/1104 (0.5%). NoInfo: 3/1104 (0.3%). Certain keep: 1092/1104 (98.9%) ########################## YFR025C (1008bp = 336AA) has 6 hits (HIS2) Histidinolphosphatase Spar (test2) orthologous hit at 89% f1008/1008 (100.0%) over 1008bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1008/1008 (100.0%) over 1008bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f994/1005 (98.9%) over 1008bp for offset 0 <== THIS IS REAL YFR025C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR025C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1105 (0.4%). Conflicting: 5/1105 (0.5%). NoInfo: 3/1105 (0.3%). Certain keep: 1093/1105 (98.9%) ########################## YFR027W (846bp = 282AA) has 5 hits (ECO1) involved in establishment of cohesion ..chromatids (105) Spar (test2) orthologous hit at 89% f846/846 (100.0%) over 846bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f846/846 (100.0%) over 846bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f840/845 (99.4%) over 846bp for offset 0 <== THIS IS REAL YFR027W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR027W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1106 (0.4%). Conflicting: 5/1106 (0.5%). NoInfo: 3/1106 (0.3%). Certain keep: 1094/1106 (98.9%) ########################## YFR028C (1656bp = 552AA) has 6 hits (CDC14) soluble tyrosine-specific protein phosphatase Spar (test2) orthologous hit at 92% f1656/1656 (100.0%) over 1656bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1652/1655 (99.8%) over 1656bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1636/1653 (99.0%) over 1656bp for offset 0 <== THIS IS REAL YFR028C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR028C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1107 (0.4%). Conflicting: 5/1107 (0.5%). NoInfo: 3/1107 (0.3%). Certain keep: 1095/1107 (98.9%) ########################## YFR029W (2037bp = 679AA) has 7 hits (PTR3) regulator of peptide permease Spar (test2) orthologous hit at 90% f2037/2037 (100.0%) over 2037bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1929/1935 (99.7%) over 1940bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2010/2027 (99.2%) over 2036bp for offset 0 <== THIS IS REAL YFR029W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR029W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1108 (0.4%). Conflicting: 5/1108 (0.5%). NoInfo: 3/1108 (0.3%). Certain keep: 1096/1108 (98.9%) ########################## YFR030W (3108bp = 1036AA) has 6 hits (MET10) subunit of assimilatory sulfite reductase Spar (test2) orthologous hit at 90% f3097/3105 (99.7%) over 3107bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3099/3106 (99.8%) over 3108bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2348/3102 (75.7%) over 3108bp for offset 2 Sbay (test3) Longest island has f98 at 83% over 2385bp <== THIS IS REAL 0 100200300400500600700800901k 1k 1k 1k 1k 1k 1k 1k 1k 1k2k 2k 2k 2k 2k 2k 2k 2k 2k2k 3k 33k |_|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__|_|__|__|| 99f 81% 727bp 98f 83% 2385bp Sb687full |====================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YFR030W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR030W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1109 (0.4%). Conflicting: 5/1109 (0.5%). NoInfo: 3/1109 (0.3%). Certain keep: 1097/1109 (98.9%) ########################## YFR031C (3513bp = 1171AA) has 115 hits (SMC2) SMC chromosomal ATPase family member Spar (test2) orthologous hit at 90% f3513/3513 (100.0%) over 3513bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3492/3510 (99.5%) over 3513bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3479/3505 (99.3%) over 3513bp for offset 0 <== THIS IS REAL YFR031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1110 (0.4%). Conflicting: 5/1110 (0.5%). NoInfo: 3/1110 (0.3%). Certain keep: 1098/1110 (98.9%) ########################## YFR032C-A (180bp = 60AA) (tdist=46.7k) has 29 hits (RPL29) Ribosomal protein L29 (YL43) Spar (test2) orthologous hit at 98% f180/180 (100.0%) over 180bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 98% f180/180 (100.0%) over 180bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 96% f180/180 (100.0%) over 180bp for offset 0 <== THIS IS REAL YFR032C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR032C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1111 (0.4%). Conflicting: 5/1111 (0.5%). NoInfo: 3/1111 (0.3%). Certain keep: 1099/1111 (98.9%) ########################## YFR033C (444bp = 148AA) (tdist=45.3k) has 1437 hits (QCR6) ubiquinol-cytochrome ..6 (17 kDa) (115) Spar (test2) orthologous hit at 89% f438/441 (99.3%) over 444bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f434/439 (98.9%) over 444bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f433/442 (98.0%) over 444bp for offset 0 <== THIS IS REAL YFR033C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR033C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1112 (0.4%). Conflicting: 5/1112 (0.4%). NoInfo: 3/1112 (0.3%). Certain keep: 1100/1112 (98.9%) ########################## YFR034C (939bp = 313AA) (tdist=44.2k) has 6 hits (PHO4) myc-type helix-loop-heli..ion factor (102) Spar (test2) orthologous hit at 79% f821/929 (88.4%) over 939bp for offset 0 Spar (test3) Longest island has f98 at 85% over 466bp <== THIS IS REAL Smik (test2) orthologous hit at 76% f711/792 (89.8%) over 802bp for offset 2 Smik (test3) Longest island has f97 at 84% over 413bp <== THIS IS REAL Sbay (test2) orthologous hit at 72% f280/315 (88.9%) over 316bp for offset 0 Sbay (test3) Longest island has f98 at 78% over 254bp Sbay (test2) orthologous hit at 60% f155/265 (58.5%) over 279bp for offset 1 Sbay (test3) Longest island has f89 at 71% over 98bp 0 100 200 300 400 500 600 700 800 900 939 |________|_________|________|_________|________|_________|_________|________|_________|___| 98f 85% 466bp 97f 86% 331bp Sp434full |===========================================>...............|=============================|> 89f 71% 350bp 97f 84% 413bp Sm267full |...|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> 98f 78% 254bp Sb686brk |......|ooooooooooooooooooooooo| 89f 71% 98b100f 53%68f 76f 55% 33bp Sb686brk |========>.|>......|==>|==> | YFR034C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YFR034C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 4/1113 (0.4%). Conflicting: 5/1113 (0.4%). NoInfo: 3/1113 (0.3%). Certain keep: 1101/1113 (98.9%) ########################## YFR036W (375bp = 125AA) (tdist=42.8k) has 30 hits (CDC26) cell division control protein Spar (test2) orthologous hit at 75% f214/294 (72.8%) over 310bp for offset 0 Spar (test3) Longest island has f94 at 87% over 194bp Spar (test2) orthologous hit at 86% f215/215 (100.0%) over 215bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f243/307 (79.2%) over 311bp for offset 2 Smik (test3) Longest island has f100 at 80% over 206bp Smik (test2) orthologous hit at 72% f178/200 (89.0%) over 211bp for offset 0 Smik (test3) Longest island has f90 at 73% over 197bp Sbay (test2) orthologous hit at 77% f345/345 (100.0%) over 348bp for offset 0 <== THIS IS REAL 0 100 200 300 375 |_______________________|_______________________|_______________________|_________________| 75f 70% 40bp 66f 50%100f 43% 294f 87% 194bp Sp434full ||========>...|oooooo|xxxxx>...|===========================================|=> 100f 80% 206bp Sm267full |================================================>........................> | 90f 73% 197bp Sm267full |...|oooooooooooooooooooooooooooooooooooooooooooooo| YFR036W: kill: Spar - keep: Spar Sbay Not a single protein hit, and yet, certain keep YFR036W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 4/1114 (0.4%). Conflicting: 5/1114 (0.4%). NoInfo: 3/1114 (0.3%). Certain keep: 1102/1114 (98.9%) ########################## YFR037C (1674bp = 558AA) (tdist=40.9k) has 11 hits (RSC8) chromatin remodeling c..ex subunit (94) Spar (test2) orthologous hit at 91% f1674/1674 (100.0%) over 1674bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1669/1673 (99.8%) over 1674bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1643/1665 (98.7%) over 1674bp for offset 0 <== THIS IS REAL YFR037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1115 (0.4%). Conflicting: 5/1115 (0.4%). NoInfo: 3/1115 (0.3%). Certain keep: 1103/1115 (98.9%) ########################## YFR040W (2718bp = 906AA) (tdist=32.9k) has 342 hits (SAP155) cell cycle protein,.. with Sit4 (100) Spar (test2) orthologous hit at 89% f2690/2706 (99.4%) over 2716bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2347/2551 (92.0%) over 2569bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2646/2697 (98.1%) over 2711bp for offset 0 <== THIS IS REAL YFR040W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR040W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1116 (0.4%). Conflicting: 5/1116 (0.4%). NoInfo: 3/1116 (0.3%). Certain keep: 1104/1116 (98.9%) ########################## YFR047C (888bp = 296AA) (tdist=24.9k) has 5 hits (BNA6) YFR047C Spar (test2) orthologous hit at 92% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f885/887 (99.8%) over 888bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL YFR047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1117 (0.4%). Conflicting: 5/1117 (0.4%). NoInfo: 3/1117 (0.3%). Certain keep: 1105/1117 (98.9%) ########################## YFR049W (372bp = 124AA) (tdist=21.2k) has 5 hits (YMR31) mitochondrial ribosomal..precursor) (100) Spar (test2) orthologous hit at 87% f372/372 (100.0%) over 372bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f372/372 (100.0%) over 372bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f367/371 (98.9%) over 372bp for offset 0 <== THIS IS REAL YFR049W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR049W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1118 (0.4%). Conflicting: 5/1118 (0.4%). NoInfo: 3/1118 (0.3%). Certain keep: 1106/1118 (98.9%) ########################## YFR050C (801bp = 267AA) (tdist=20.2k) has 5 hits (PRE4) proteasome subunit neces..g activity (135) Spar (test2) orthologous hit at 91% f799/799 (100.0%) over 799bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f800/800 (100.0%) over 800bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f793/798 (99.4%) over 799bp for offset 0 <== THIS IS REAL YFR050C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR050C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1119 (0.4%). Conflicting: 5/1119 (0.4%). NoInfo: 3/1119 (0.3%). Certain keep: 1107/1119 (98.9%) ########################## YFR051C (1641bp = 547AA) (tdist=18.3k) has 7 hits (RET2) vesicle coat component Spar (test2) orthologous hit at 90% f1628/1640 (99.3%) over 1641bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1638/1638 (100.0%) over 1641bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1641/1641 (100.0%) over 1641bp for offset 0 <== THIS IS REAL YFR051C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR051C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1120 (0.4%). Conflicting: 5/1120 (0.4%). NoInfo: 3/1120 (0.3%). Certain keep: 1108/1120 (98.9%) ########################## YFR052W (825bp = 275AA) (tdist=16.8k) has 12 hits (RPN12) cytoplasmic 32 - 34 kDa protein Spar (test2) orthologous hit at 92% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f825/825 (100.0%) over 825bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f818/824 (99.3%) over 825bp for offset 0 <== THIS IS REAL YFR052W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR052W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1121 (0.4%). Conflicting: 5/1121 (0.4%). NoInfo: 3/1121 (0.3%). Certain keep: 1109/1121 (98.9%) ########################## YFR053C (1458bp = 486AA) (tdist=15.1k) has 20 hits (HXK1) Hexokinase I (PI) (als..okinase A) (102) Spar (test2) orthologous hit at 93% f1458/1458 (100.0%) over 1458bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1453/1457 (99.7%) over 1458bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1443/1455 (99.2%) over 1458bp for offset 0 <== THIS IS REAL YFR053C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YFR053C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1122 (0.4%). Conflicting: 5/1122 (0.4%). NoInfo: 3/1122 (0.3%). Certain keep: 1110/1122 (98.9%) ########################## YGL263W (1143bp = 381AA) (tdist=2.7k) has 63 hits (COS12) similar to subtelomeri..d proteins (102) Spar (test2) non-orthologous hit at 62% f710/883 (80.4%) over 898bp for offset 0 Spar (test3) Longest island has f94 at 67% over 550bp <== THIS IS REAL Smik (test2) non-orthologous hit at 91% f998/1092 (91.4%) over 1101bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 61% f472/909 (51.9%) over 934bp for offset 2 Sbay (test3) Longest island has f92 at 66% over 418bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|_______|______|_______|_______|_______|___| 94f 67% 550bp Sp55brk |..................|==========================================>.......> | 92f 66% 418bp Sb438full |================================>.......................................> | YGL263W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL263W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1123 (0.4%). Conflicting: 5/1123 (0.4%). NoInfo: 3/1123 (0.3%). Certain keep: 1111/1123 (98.9%) ########################## YGL259W (498bp = 166AA) (tdist=8.4k) has 17 hits (YPS5) GPI-anchored aspartic protease Spar (test2) non-orthologous hit at 77% f393/492 (79.9%) over 492bp for offset 1 Spar (test3) Longest island has f98 at 78% over 403bp <== THIS IS REAL Smik (test2) orthologous hit at 71% f346/346 (100.0%) over 346bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 64% f319/480 (66.5%) over 492bp for offset 1 Sbay (test3) Longest island has f90 at 68% over 198bp Sbay (test2) non-orthologous hit at 61% f222/476 (46.6%) over 482bp for offset 1 Sbay (test3) Longest island has f100 at 65% over 109bp Sbay (test2) non-orthologous hit at 60% f273/487 (56.1%) over 492bp for offset 0 Sbay (test3) Longest island has f100 at 66% over 187bp Sbay (test2) non-orthologous hit at 65% f310/333 (93.1%) over 343bp for offset 0 <== THIS IS REAL 0 100 200 300 400 498 |_________________|_________________|_________________|_________________|_________________| 98f 78% 403bp Sp283full |========================================================================>..............> | 91f 65% 150bp 80f 42% 490f 68% 198bp 94f 70% 100bp Sb481full |==========================|xxxxxxx>|===================================|ooooooooooooooooo| 100f 67% 86bp 100f 65% 109bp 92f 66% 71bp 100f 69% 83bp Sb244full |==============>|oooooooooooooooooo>.........................|oooooooooooo>|xxxxxxxxxxxxx>| 100f 66% 187bp 70f 49% 57bp 100f 50% 28bp 100f 69% 93bp Sb279full |================================>|ooooooooo>............|xxxx>...........|ooooooooooooooo|> YGL259W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL259W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1124 (0.4%). Conflicting: 5/1124 (0.4%). NoInfo: 3/1124 (0.3%). Certain keep: 1112/1124 (98.9%) ########################## YGL257C (1677bp = 559AA) (tdist=12.4k) has 19 hits (MNT2) Mannosyltransferase Spar (test2) orthologous hit at 82% f1664/1670 (99.6%) over 1674bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1016/1021 (99.5%) over 1026bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1516/1560 (97.2%) over 1570bp for offset 2 <== THIS IS REAL YGL257C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL257C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1125 (0.4%). Conflicting: 5/1125 (0.4%). NoInfo: 3/1125 (0.3%). Certain keep: 1113/1125 (98.9%) ########################## YGL256W (1398bp = 466AA) (tdist=14.9k) has 5 hits (ADH4) alcohol dehydrogenase i..oenzyme IV (91) Spar (test2) orthologous hit at 93% f1397/1397 (100.0%) over 1397bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1361/1397 (97.4%) over 1398bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1295/1365 (94.9%) over 1368bp for offset 0 <== THIS IS REAL YGL256W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL256W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1126 (0.4%). Conflicting: 5/1126 (0.4%). NoInfo: 3/1126 (0.3%). Certain keep: 1114/1126 (98.9%) ########################## YGL255W (1131bp = 377AA) (tdist=20.9k) has 12 hits (ZRT1) high-affinity zinc tra..rt protein (94) Spar (test2) orthologous hit at 91% f582/582 (100.0%) over 582bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f630/652 (96.6%) over 656bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f613/641 (95.6%) over 646bp for offset 0 <== THIS IS REAL YGL255W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL255W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1127 (0.4%). Conflicting: 5/1127 (0.4%). NoInfo: 3/1127 (0.3%). Certain keep: 1115/1127 (98.9%) ########################## YGL254W (900bp = 300AA) (tdist=22.3k) has 6 hits (FZF1) putative transcription f..nc fingers (108) Spar (test2) orthologous hit at 82% f886/897 (98.8%) over 900bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f888/898 (98.9%) over 900bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f800/882 (90.7%) over 900bp for offset 0 <== THIS IS REAL YGL254W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL254W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1128 (0.4%). Conflicting: 5/1128 (0.4%). NoInfo: 3/1128 (0.3%). Certain keep: 1116/1128 (98.9%) ########################## YGL253W (1461bp = 487AA) (tdist=23.9k) has 24 hits (HXK2) Hexokinase II (PII) (a..okinase B) (104) Spar (test2) orthologous hit at 95% f1461/1461 (100.0%) over 1461bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1461/1461 (100.0%) over 1461bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f1456/1460 (99.7%) over 1461bp for offset 0 <== THIS IS REAL YGL253W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL253W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1129 (0.4%). Conflicting: 5/1129 (0.4%). NoInfo: 3/1129 (0.3%). Certain keep: 1117/1129 (98.9%) ########################## YGL252C (1767bp = 589AA) (tdist=25.7k) has 9 hits (RTG2) involved in interorgane..nd nucleus (144) Spar (test2) orthologous hit at 92% f1762/1766 (99.8%) over 1767bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1767/1767 (100.0%) over 1767bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1766/1766 (100.0%) over 1766bp for offset 0 <== THIS IS REAL YGL252C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL252C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1130 (0.4%). Conflicting: 5/1130 (0.4%). NoInfo: 3/1130 (0.3%). Certain keep: 1118/1130 (98.9%) ########################## YGL249W (2115bp = 705AA) (tdist=33.0k) has 36 hits (ZIP2) involved in meiotic re..isjunction (107) Spar (test2) orthologous hit at 83% f2087/2110 (98.9%) over 2115bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f2006/2096 (95.7%) over 2115bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f900/954 (94.3%) over 964bp for offset 0 <== THIS IS REAL YGL249W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL249W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1131 (0.4%). Conflicting: 5/1131 (0.4%). NoInfo: 3/1131 (0.3%). Certain keep: 1119/1131 (98.9%) ########################## YGL248W (1110bp = 370AA) (tdist=35.6k) has 4 hits (PDE1) 3',5'-Cyclic-nucleotide..w affinity (112) Spar (test2) orthologous hit at 90% f1110/1110 (100.0%) over 1110bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1101/1108 (99.4%) over 1110bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1098/1107 (99.2%) over 1109bp for offset 0 <== THIS IS REAL YGL248W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL248W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1132 (0.4%). Conflicting: 5/1132 (0.4%). NoInfo: 3/1132 (0.3%). Certain keep: 1120/1132 (98.9%) ########################## YGL247W (594bp = 198AA) (tdist=36.9k) has 4 hits (BRR6) Protein required for cel.. viability (91) Spar (test2) orthologous hit at 86% f588/593 (99.2%) over 594bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f586/590 (99.3%) over 594bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f584/594 (98.3%) over 594bp for offset 0 <== THIS IS REAL YGL247W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL247W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1133 (0.4%). Conflicting: 5/1133 (0.4%). NoInfo: 3/1133 (0.3%). Certain keep: 1121/1133 (98.9%) ########################## YGL246C (1164bp = 388AA) (tdist=37.6k) has 12 hits (RAI1) Product of gene unknown Spar (test2) orthologous hit at 89% f1159/1163 (99.7%) over 1164bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1164/1164 (100.0%) over 1164bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1160/1160 (100.0%) over 1160bp for offset 0 <== THIS IS REAL YGL246C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL246C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1134 (0.4%). Conflicting: 5/1134 (0.4%). NoInfo: 3/1134 (0.3%). Certain keep: 1122/1134 (98.9%) ########################## YGL244W (1677bp = 559AA) (tdist=41.4k) has 132 hits (RTF1) Nuclear protein Spar (test2) orthologous hit at 91% f1674/1674 (100.0%) over 1677bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1105/1539 (71.8%) over 1541bp for offset 0 Smik (test3) Longest island has f99 at 87% over 1112bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1186/1294 (91.7%) over 1307bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|_____|____|____|_____|____|____|_____|____|_____|____|____|_____|____|____|____| 99f 87% 1112bp 99f 86% 435bp Sm349full |==========================================================>|xxxxxxxxxxxxxxxxxxxxxx| YGL244W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL244W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1135 (0.4%). Conflicting: 5/1135 (0.4%). NoInfo: 3/1135 (0.3%). Certain keep: 1123/1135 (98.9%) ########################## YGL243W (1203bp = 401AA) (tdist=43.3k) has 13 hits (TAD1) tRNA-specific adenosin..1p/scADAT1 (115) Spar (test2) orthologous hit at 87% f1160/1198 (96.8%) over 1199bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1173/1197 (98.0%) over 1203bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1137/1181 (96.3%) over 1188bp for offset 0 <== THIS IS REAL YGL243W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL243W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1136 (0.4%). Conflicting: 5/1136 (0.4%). NoInfo: 3/1136 (0.3%). Certain keep: 1124/1136 (98.9%) ########################## YGL241W (3015bp = 1005AA) (tdist=45.4k) has 81 hits (KAP114) Kap114p Spar (test2) orthologous hit at 86% f3001/3013 (99.6%) over 3015bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f3004/3013 (99.7%) over 3015bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2792/2920 (95.6%) over 2942bp for offset 0 <== THIS IS REAL YGL241W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL241W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1137 (0.4%). Conflicting: 5/1137 (0.4%). NoInfo: 3/1137 (0.3%). Certain keep: 1125/1137 (98.9%) ########################## YGL240W (852bp = 284AA) (tdist=48.5k) has 5 hits (DOC1) component of the anaphas..ng complex (99) Spar (test2) orthologous hit at 88% f820/852 (96.2%) over 852bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f763/851 (89.7%) over 852bp for offset 1 Smik (test3) Longest island has f100 at 86% over 763bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f836/849 (98.5%) over 851bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 852 |_________|__________|_________|__________|_________|__________|_________|__________|_____| 100f 86% 763bp Sm349full |........|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YGL240W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL240W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1138 (0.4%). Conflicting: 5/1138 (0.4%). NoInfo: 3/1138 (0.3%). Certain keep: 1126/1138 (98.9%) ########################## YGL238W (2883bp = 961AA) (tdist=49.5k) has 21 hits (CSE1) (putative) kinetochore protein Flanking ORFs are: YGL241W and YGL239C. YGL238W skipped ########################## YGL237C (798bp = 266AA) has 353 hits (HAP2) transcriptional activator protein of CYC1 Spar (test2) orthologous hit at 85% f464/508 (91.3%) over 511bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 87% f412/412 (100.0%) over 412bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f466/481 (96.9%) over 485bp for offset 0 <== THIS IS REAL YGL237C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL237C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1139 (0.4%). Conflicting: 5/1139 (0.4%). NoInfo: 3/1139 (0.3%). Certain keep: 1127/1139 (98.9%) ########################## YGL236C (2040bp = 680AA) has 9 hits (MTO1) Mitochondrial Translation Optimizatio.. coli GidA (116) Flanking ORFs are: YGL238W and YGL236C. YGL236C skipped ########################## YGL234W (2409bp = 803AA) has 6 hits (ADE5,7) glycinamide ribotide synthetase and..synthetase (115) Spar (test2) orthologous hit at 93% f2409/2409 (100.0%) over 2409bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2409/2409 (100.0%) over 2409bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2401/2408 (99.7%) over 2409bp for offset 0 <== THIS IS REAL YGL234W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL234W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1140 (0.4%). Conflicting: 5/1140 (0.4%). NoInfo: 3/1140 (0.3%). Certain keep: 1128/1140 (98.9%) ########################## YGL233W (2733bp = 911AA) has 53 hits (SEC15) 113kD component of the Exocyst comp..and EXO70. (176) Spar (test2) orthologous hit at 91% f2732/2732 (100.0%) over 2732bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2706/2728 (99.2%) over 2732bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2697/2720 (99.2%) over 2732bp for offset 0 <== THIS IS REAL YGL233W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL233W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1141 (0.4%). Conflicting: 5/1141 (0.4%). NoInfo: 3/1141 (0.3%). Certain keep: 1129/1141 (98.9%) ########################## YGL229C (2457bp = 819AA) has 264 hits (SAP4) Sit4 protein phosphatase-associated protein Spar (test2) orthologous hit at 88% f2447/2453 (99.8%) over 2457bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2377/2447 (97.1%) over 2457bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f1932/2395 (80.7%) over 2451bp for offset 0 Sbay (test3) Longest island has f95 at 76% over 1569bp <== THIS IS REAL 0 100 200300 400 500600 700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k |__|___|__|___|___|__|___|___|__|___|___|__|___|___|__|___|___|__|___|___|__|___|___|__|__| 95f 76% 1569bp Sb629full |========================================================>...............................>| YGL229C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL229C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1142 (0.4%). Conflicting: 5/1142 (0.4%). NoInfo: 3/1142 (0.3%). Certain keep: 1130/1142 (98.9%) ########################## YGL228W (1734bp = 578AA) has 33 hits (SHE10) lethal when overexpressed Spar (test2) orthologous hit at 85% f1660/1705 (97.4%) over 1709bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1706/1727 (98.8%) over 1731bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1669/1703 (98.0%) over 1715bp for offset 0 <== THIS IS REAL YGL228W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL228W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1143 (0.3%). Conflicting: 5/1143 (0.4%). NoInfo: 3/1143 (0.3%). Certain keep: 1131/1143 (99.0%) ########################## YGL227W (2877bp = 959AA) has 427 hits (VID30) TOR inhibitory protein, similar to..ine kinase (134) Spar (test2) orthologous hit at 77% f1718/2022 (85.0%) over 2049bp for offset 1 Spar (test3) Longest island has f99 at 88% over 1464bp <== THIS IS REAL Smik (test2) orthologous hit at 76% f2076/2426 (85.6%) over 2464bp for offset 0 Smik (test3) Longest island has f98 at 83% over 1918bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2839/2864 (99.1%) over 2877bp for offset 0 <== THIS IS REAL 0 100200300400500600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 2k |__|__|__|__|__|__|__|___|__|__|__|__|__|__|__|___|__|__|__|__|__|__|__|___|__|__|__|__|__| 99f 88% 1464bp Sp283full ||xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.................> | 98f 83% 1918bp Sm349full |===========================================================>................> | YGL227W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL227W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1144 (0.3%). Conflicting: 5/1144 (0.4%). NoInfo: 3/1144 (0.3%). Certain keep: 1132/1144 (99.0%) ########################## YGL225W (1014bp = 338AA) has 13 hits (VRG4) Golgi GDP-mannose transporter Spar (test2) orthologous hit at 93% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL YGL225W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL225W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1145 (0.3%). Conflicting: 5/1145 (0.4%). NoInfo: 3/1145 (0.3%). Certain keep: 1133/1145 (99.0%) ########################## YGL224C (843bp = 281AA) has 9 hits (SDT1) Spar (test2) orthologous hit at 90% f843/843 (100.0%) over 843bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f842/842 (100.0%) over 842bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f837/842 (99.4%) over 843bp for offset 0 <== THIS IS REAL YGL224C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL224C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1146 (0.3%). Conflicting: 5/1146 (0.4%). NoInfo: 3/1146 (0.3%). Certain keep: 1134/1146 (99.0%) ########################## YGL223C (1254bp = 418AA) has 9 hits (COD3) Interacts with Sec35 Spar (test2) orthologous hit at 85% f1254/1254 (100.0%) over 1254bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1254/1254 (100.0%) over 1254bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1239/1250 (99.1%) over 1252bp for offset 0 <== THIS IS REAL YGL223C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL223C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1147 (0.3%). Conflicting: 5/1147 (0.4%). NoInfo: 3/1147 (0.3%). Certain keep: 1135/1147 (99.0%) ########################## YGL222C (528bp = 176AA) has 9 hits (EDC1) Enhancer of mRNA Decapping Spar (test2) orthologous hit at 90% f528/528 (100.0%) over 528bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f527/527 (100.0%) over 527bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f269/276 (97.5%) over 277bp for offset 0 <== THIS IS REAL YGL222C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL222C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1148 (0.3%). Conflicting: 5/1148 (0.4%). NoInfo: 3/1148 (0.3%). Certain keep: 1136/1148 (99.0%) ########################## YGL221C (867bp = 289AA) has 6 hits (NIF3) similar to Listeria monocytogenes majo..e product) (114) Spar (test2) orthologous hit at 88% f867/867 (100.0%) over 867bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f867/867 (100.0%) over 867bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f447/486 (92.0%) over 488bp for offset 0 <== THIS IS REAL YGL221C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL221C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1149 (0.3%). Conflicting: 5/1149 (0.4%). NoInfo: 3/1149 (0.3%). Certain keep: 1137/1149 (99.0%) ########################## YGL219C (1380bp = 460AA) has 9 hits (MMM2) Hypothetical ORF Flanking ORFs are: YGL222C and YGL220W. YGL219C skipped ########################## YGL216W (2418bp = 806AA) has 13 hits (KIP3) kinesin-related protein involved in mitosis Flanking ORFs are: YGL222C and YGL220W. YGL216W skipped ########################## YGL215W (1359bp = 453AA) has 51 hits (CLG1) cyclin-like protein that interacts with Pho85 Spar (test2) orthologous hit at 88% f901/921 (97.8%) over 921bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1339/1353 (99.0%) over 1358bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f1085/1190 (91.2%) over 1210bp for offset 0 <== THIS IS REAL YGL215W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL215W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1150 (0.3%). Conflicting: 5/1150 (0.4%). NoInfo: 3/1150 (0.3%). Certain keep: 1138/1150 (99.0%) ########################## YGL213C (1194bp = 398AA) has 10 hits (SKI8) antiviral protein, mRNA is induced e..in meiosis (95) Flanking ORFs are: YGL216W and YGL214W. YGL213C skipped ########################## YGL212W (951bp = 317AA) has 6 hits (VAM7) hydrophilic protein, heptad repeat motif Spar (test2) orthologous hit at 87% f942/947 (99.5%) over 948bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f944/948 (99.6%) over 950bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f259/259 (100.0%) over 259bp for offset 0 <== THIS IS REAL YGL212W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL212W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1151 (0.3%). Conflicting: 5/1151 (0.4%). NoInfo: 3/1151 (0.3%). Certain keep: 1139/1151 (99.0%) ########################## YGL210W (669bp = 223AA) has 23 hits (YPT32) ras-like GTPase, highly homologous to YPT31 Spar (test2) orthologous hit at 95% f669/669 (100.0%) over 669bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f669/669 (100.0%) over 669bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 72% f642/665 (96.5%) over 669bp for offset 0 <== THIS IS REAL YGL210W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL210W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1152 (0.3%). Conflicting: 5/1152 (0.4%). NoInfo: 3/1152 (0.3%). Certain keep: 1140/1152 (99.0%) ########################## YGL209W (1149bp = 383AA) has 12 hits (MIG2) Protein containing zinc fingers very..s in Mig1p (113) Spar (test2) orthologous hit at 92% f1149/1149 (100.0%) over 1149bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1148/1149 (99.9%) over 1149bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f686/713 (96.2%) over 719bp for offset 2 <== THIS IS REAL YGL209W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL209W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1153 (0.3%). Conflicting: 5/1153 (0.4%). NoInfo: 3/1153 (0.3%). Certain keep: 1141/1153 (99.0%) ########################## YGL208W (1248bp = 416AA) has 11 hits (SIP2) component of Snf1 protein complex in..starvation (120) Spar (test2) orthologous hit at 89% f820/820 (100.0%) over 820bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1215/1242 (97.8%) over 1248bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f667/699 (95.4%) over 706bp for offset 0 <== THIS IS REAL YGL208W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL208W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1154 (0.3%). Conflicting: 5/1154 (0.4%). NoInfo: 3/1154 (0.3%). Certain keep: 1142/1154 (99.0%) ########################## YGL207W (3108bp = 1036AA) has 53 hits (SPT16) global regulator of transcription Spar (test2) orthologous hit at 91% f3108/3108 (100.0%) over 3108bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3108/3108 (100.0%) over 3108bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2258/3107 (72.7%) over 3107bp for offset 1 Sbay (test3) Longest island has f100 at 84% over 2262bp <== THIS IS REAL 0 100200300400500600700800901k 1k 1k 1k 1k 1k 1k 1k 1k 1k2k 2k 2k 2k 2k 2k 2k 2k 2k2k 3k 33k |_|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__|_|__|__|| 100f 84% 2262bp 100f 88% 848bp Sb406full |================================================================|oooooooooooooooooooooooo| YGL207W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL207W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1155 (0.3%). Conflicting: 5/1155 (0.4%). NoInfo: 3/1155 (0.3%). Certain keep: 1143/1155 (99.0%) ########################## YGL206C (4962bp = 1654AA) has 8 hits (CHC1) presumed vesicle coat protein Spar (test2) orthologous hit at 91% f4961/4961 (100.0%) over 4961bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f4953/4960 (99.9%) over 4962bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f4962/4962 (100.0%) over 4962bp for offset 0 <== THIS IS REAL YGL206C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL206C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1156 (0.3%). Conflicting: 5/1156 (0.4%). NoInfo: 3/1156 (0.3%). Certain keep: 1144/1156 (99.0%) ########################## YGL205W (2247bp = 749AA) has 10 hits (POX1) fatty-acyl coenzyme A oxidase Spar (test2) orthologous hit at 89% f2245/2247 (99.9%) over 2247bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2242/2246 (99.8%) over 2247bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2247/2247 (100.0%) over 2247bp for offset 0 <== THIS IS REAL YGL205W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL205W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1157 (0.3%). Conflicting: 5/1157 (0.4%). NoInfo: 3/1157 (0.3%). Certain keep: 1145/1157 (99.0%) ########################## YGL203C (2190bp = 730AA) has 572 hits (KEX1) carboxypeptidase B-like processing protease Spar (test2) orthologous hit at 56% f167/308 (54.2%) over 320bp for offset 0 Spar (test3) Longest island has f83 at 61% over 138bp Spar (test2) orthologous hit at 58% f178/301 (59.1%) over 309bp for offset 0 Spar (test3) Longest island has f100 at 70% over 89bp Smik (test2) non-orthologous hit at 81% f1283/1291 (99.4%) over 1297bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1767/1841 (96.0%) over 1863bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k |___|___|___|___|___|___|___|___|___|____|___|___|___|___|___|___|___|___|____|___|___|___| 83f 6178f 70f 59% 63bp Sp283full ||====>|>..|x>> | 7100f100f 46% 28bp Sp283full |...||===|>==> | YGL203C: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YGL203C - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 4/1158 (0.3%). Conflicting: 5/1158 (0.4%). NoInfo: 3/1158 (0.3%). Certain keep: 1146/1158 (99.0%) ########################## YGL202W (1503bp = 501AA) has 10 hits (ARO8) aromatic amino acid aminotransferase Spar (test2) orthologous hit at 91% f1502/1502 (100.0%) over 1502bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1503/1503 (100.0%) over 1503bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1495/1502 (99.5%) over 1503bp for offset 0 <== THIS IS REAL YGL202W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL202W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1159 (0.3%). Conflicting: 5/1159 (0.4%). NoInfo: 3/1159 (0.3%). Certain keep: 1147/1159 (99.0%) ########################## YGL201C (3054bp = 1018AA) has 56 hits (MCM6) component of MCM initiator complex ..eplication (107) Spar (test2) orthologous hit at 92% f2604/2604 (100.0%) over 2604bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2669/2769 (96.4%) over 2788bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1251/1301 (96.2%) over 1304bp for offset 0 <== THIS IS REAL YGL201C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL201C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1160 (0.3%). Conflicting: 5/1160 (0.4%). NoInfo: 3/1160 (0.3%). Certain keep: 1148/1160 (99.0%) ########################## YGL200C (612bp = 204AA) has 4 hits (EMP24) type I transmembrane protein, compone..t vesicles (129) Spar (test2) non-orthologous hit at 92% f612/612 (100.0%) over 612bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f612/612 (100.0%) over 612bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f612/612 (100.0%) over 612bp for offset 0 <== THIS IS REAL YGL200C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL200C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1161 (0.3%). Conflicting: 5/1161 (0.4%). NoInfo: 3/1161 (0.3%). Certain keep: 1149/1161 (99.0%) ########################## YGL197W (4464bp = 1488AA) has 35 hits (MDS3) negative regulator of early meiotic genes Spar (test2) orthologous hit at 89% f2415/2426 (99.5%) over 2427bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2451/2469 (99.3%) over 2476bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3973/4012 (99.0%) over 4031bp for offset 0 <== THIS IS REAL YGL197W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL197W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1162 (0.3%). Conflicting: 5/1162 (0.4%). NoInfo: 3/1162 (0.3%). Certain keep: 1150/1162 (99.0%) ########################## YGL195W (8019bp = 2673AA) has 16 hits (GCN1) translational activator of GCN4 thr..starvation (129) Spar (test2) orthologous hit at 90% f8019/8019 (100.0%) over 8019bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f7985/8013 (99.7%) over 8019bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f7991/8015 (99.7%) over 8019bp for offset 0 <== THIS IS REAL YGL195W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL195W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1163 (0.3%). Conflicting: 5/1163 (0.4%). NoInfo: 3/1163 (0.3%). Certain keep: 1151/1163 (99.0%) ########################## YGL194C (1359bp = 453AA) has 19 hits (HOS2) (putative) histone deacetylase Spar (test2) orthologous hit at 92% f1359/1359 (100.0%) over 1359bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1359/1359 (100.0%) over 1359bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1357/1357 (100.0%) over 1357bp for offset 0 <== THIS IS REAL YGL194C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL194C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1164 (0.3%). Conflicting: 5/1164 (0.4%). NoInfo: 3/1164 (0.3%). Certain keep: 1152/1164 (99.0%) ########################## YGL192W (1803bp = 601AA) has 17 hits (IME4) mRNA methyltransferase (putative) Spar (test2) orthologous hit at 87% f1703/1796 (94.8%) over 1803bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1684/1764 (95.5%) over 1782bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1667/1781 (93.6%) over 1794bp for offset 0 <== THIS IS REAL YGL192W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL192W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1165 (0.3%). Conflicting: 5/1165 (0.4%). NoInfo: 3/1165 (0.3%). Certain keep: 1153/1165 (99.0%) ########################## YGL191W (390bp = 130AA) has 5 hits (COX13) subunit VIa of cytochrome c oxidase, ..t with ATP (114) Spar (test2) orthologous hit at 90% f390/390 (100.0%) over 390bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f390/390 (100.0%) over 390bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f390/390 (100.0%) over 390bp for offset 0 <== THIS IS REAL YGL191W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL191W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1166 (0.3%). Conflicting: 5/1166 (0.4%). NoInfo: 3/1166 (0.3%). Certain keep: 1154/1166 (99.0%) ########################## YGL190C (1581bp = 527AA) has 43 hits (CDC55) Protein phosphatase 2A regulatory subunit B Spar (test2) orthologous hit at 95% f1581/1581 (100.0%) over 1581bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1581/1581 (100.0%) over 1581bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1273/1316 (96.7%) over 1318bp for offset 0 <== THIS IS REAL YGL190C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL190C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1167 (0.3%). Conflicting: 5/1167 (0.4%). NoInfo: 3/1167 (0.3%). Certain keep: 1155/1167 (99.0%) ########################## YGL189C (360bp = 120AA) has 8 hits (RPS26A) Ribosomal protein S26A Spar (test2) orthologous hit at 98% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 98% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 96% f360/360 (100.0%) over 360bp for offset 0 <== THIS IS REAL YGL189C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL189C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1168 (0.3%). Conflicting: 5/1168 (0.4%). NoInfo: 3/1168 (0.3%). Certain keep: 1156/1168 (99.0%) ########################## YGL187C (468bp = 156AA) has 5 hits (COX4) subunit IV of cytochrome c oxidase Spar (test2) orthologous hit at 94% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 88% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL YGL187C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL187C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1169 (0.3%). Conflicting: 5/1169 (0.4%). NoInfo: 3/1169 (0.3%). Certain keep: 1157/1169 (99.0%) ########################## YGL184C (1398bp = 466AA) has 9 hits (STR3) Cystathionine beta-lyase Spar (test2) orthologous hit at 91% f1398/1398 (100.0%) over 1398bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1398/1398 (100.0%) over 1398bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1398/1398 (100.0%) over 1398bp for offset 0 <== THIS IS REAL YGL184C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL184C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1170 (0.3%). Conflicting: 5/1170 (0.4%). NoInfo: 3/1170 (0.3%). Certain keep: 1158/1170 (99.0%) ########################## YGL183C (525bp = 175AA) has 31 hits (MND1) Spar (test2) orthologous hit at 88% f525/525 (100.0%) over 525bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f524/524 (100.0%) over 524bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f518/523 (99.0%) over 524bp for offset 0 <== THIS IS REAL YGL183C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL183C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1171 (0.3%). Conflicting: 5/1171 (0.4%). NoInfo: 3/1171 (0.3%). Certain keep: 1159/1171 (99.0%) ########################## YGL181W (1191bp = 397AA) has 222 hits (GTS1) Glycine-threonine-serine repeat protein Spar (test2) orthologous hit at 88% f1091/1114 (97.9%) over 1121bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1152/1181 (97.5%) over 1191bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1104/1122 (98.4%) over 1124bp for offset 2 <== THIS IS REAL YGL181W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL181W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1172 (0.3%). Conflicting: 5/1172 (0.4%). NoInfo: 3/1172 (0.3%). Certain keep: 1160/1172 (99.0%) ########################## YGL180W (2694bp = 898AA) has 54 hits (APG1) Protein kinase Spar (test2) orthologous hit at 90% f2694/2694 (100.0%) over 2694bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2682/2690 (99.7%) over 2694bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1634/1649 (99.1%) over 1658bp for offset 0 <== THIS IS REAL YGL180W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL180W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1173 (0.3%). Conflicting: 5/1173 (0.4%). NoInfo: 3/1173 (0.3%). Certain keep: 1161/1173 (99.0%) ########################## YGL179C (1683bp = 561AA) has 33 hits (TOS3) Hypothetical ORF Spar (test2) orthologous hit at 87% f1678/1682 (99.8%) over 1683bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1059/1059 (100.0%) over 1059bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1076/1104 (97.5%) over 1109bp for offset 0 <== THIS IS REAL YGL179C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL179C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1174 (0.3%). Conflicting: 5/1174 (0.4%). NoInfo: 3/1174 (0.3%). Certain keep: 1162/1174 (99.0%) ########################## YGL175C (1038bp = 346AA) has 4 hits (SAE2) involved in meiotic recombination Spar (test2) orthologous hit at 89% f1033/1037 (99.6%) over 1038bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f992/1033 (96.0%) over 1038bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f987/1032 (95.6%) over 1038bp for offset 0 <== THIS IS REAL YGL175C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL175C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1175 (0.3%). Conflicting: 5/1175 (0.4%). NoInfo: 3/1175 (0.3%). Certain keep: 1163/1175 (99.0%) ########################## YGL174W (801bp = 267AA) has 28 hits (BUD13) Spar (test2) orthologous hit at 86% f789/797 (99.0%) over 801bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f784/798 (98.2%) over 801bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f757/796 (95.1%) over 801bp for offset 0 <== THIS IS REAL YGL174W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL174W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1176 (0.3%). Conflicting: 5/1176 (0.4%). NoInfo: 3/1176 (0.3%). Certain keep: 1164/1176 (99.0%) ########################## YGL173C (4587bp = 1529AA) has 39 hits (KEM1) cytoplasmic 5'-to-3' exonuclease. Spar (test2) orthologous hit at 90% f3585/3587 (99.9%) over 3590bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f4553/4575 (99.5%) over 4585bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f3973/4003 (99.3%) over 4010bp for offset 0 <== THIS IS REAL YGL173C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL173C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1177 (0.3%). Conflicting: 5/1177 (0.4%). NoInfo: 3/1177 (0.3%). Certain keep: 1165/1177 (99.0%) ########################## YGL172W (1419bp = 473AA) has 81 hits (NUP49) nuclear pore complex protein with G..ence motif (109) Spar (test2) orthologous hit at 91% f762/766 (99.5%) over 766bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f761/762 (99.9%) over 765bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f750/754 (99.5%) over 755bp for offset 0 <== THIS IS REAL YGL172W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL172W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1178 (0.3%). Conflicting: 5/1178 (0.4%). NoInfo: 3/1178 (0.3%). Certain keep: 1166/1178 (99.0%) ########################## YGL171W (1695bp = 565AA) has 92 hits (ROK1) RNA helicase involved in rRNA processing Spar (test2) orthologous hit at 91% f1694/1695 (99.9%) over 1695bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1676/1693 (99.0%) over 1694bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1655/1686 (98.2%) over 1688bp for offset 1 <== THIS IS REAL YGL171W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL171W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1179 (0.3%). Conflicting: 5/1179 (0.4%). NoInfo: 3/1179 (0.3%). Certain keep: 1167/1179 (99.0%) ########################## YGL170C (1242bp = 414AA) has 21 hits (SPO74) Protein involved in sporulation Spar (test2) orthologous hit at 86% f1242/1242 (100.0%) over 1242bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1218/1237 (98.5%) over 1242bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1178/1224 (96.2%) over 1242bp for offset 0 <== THIS IS REAL YGL170C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL170C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1180 (0.3%). Conflicting: 5/1180 (0.4%). NoInfo: 3/1180 (0.3%). Certain keep: 1168/1180 (99.0%) ########################## YGL169W (1281bp = 427AA) has 8 hits (SUA5) translation initiation protein Spar (test2) orthologous hit at 90% f1272/1279 (99.5%) over 1281bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1275/1279 (99.7%) over 1281bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1257/1277 (98.4%) over 1281bp for offset 0 <== THIS IS REAL YGL169W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL169W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1181 (0.3%). Conflicting: 5/1181 (0.4%). NoInfo: 3/1181 (0.3%). Certain keep: 1169/1181 (99.0%) ########################## YGL167C (2853bp = 951AA) has 37 hits (PMR1) Ca++-Pump, ATPase Flanking ORFs are: YGL170C and YGL168W. YGL167C skipped ########################## YGL166W (678bp = 226AA) has 7 hits (CUP2) Activator of transcription Flanking ORFs are: YGL170C and YGL168W. YGL166W skipped ########################## YGL163C (2697bp = 899AA) has 64 hits (RAD54) DNA-dependent ATPase Spar (test2) orthologous hit at 90% f2249/2249 (100.0%) over 2249bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2696/2697 (100.0%) over 2697bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1511/1513 (99.9%) over 1514bp for offset 0 <== THIS IS REAL YGL163C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL163C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1182 (0.3%). Conflicting: 5/1182 (0.4%). NoInfo: 3/1182 (0.3%). Certain keep: 1170/1182 (99.0%) ########################## YGL162W (900bp = 300AA) has 9 hits (SUT1) hypoxic gene family involved in sterol transport Spar (test2) orthologous hit at 87% f889/896 (99.2%) over 900bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f893/895 (99.8%) over 899bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f594/675 (88.0%) over 692bp for offset 2 Sbay (test3) Longest island has f96 at 74% over 566bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 |_________|_________|_________|_________|_________|_________|_________|_________|_________| 96f 74% 566bp Sb401full |=======================================================>............> | YGL162W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL162W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1183 (0.3%). Conflicting: 5/1183 (0.4%). NoInfo: 3/1183 (0.3%). Certain keep: 1171/1183 (99.0%) ########################## YGL158W (1539bp = 513AA) has 23 hits (RCK1) Serine/threonine protein kinase Spar (test2) orthologous hit at 84% f1531/1538 (99.5%) over 1539bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1430/1462 (97.8%) over 1467bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f453/480 (94.4%) over 485bp for offset 0 <== THIS IS REAL YGL158W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL158W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1184 (0.3%). Conflicting: 5/1184 (0.4%). NoInfo: 3/1184 (0.3%). Certain keep: 1172/1184 (99.0%) ########################## YGL156W (3252bp = 1084AA) has 8 hits (AMS1) vacuolar alpha mannosidase Spar (test2) orthologous hit at 91% f3241/3250 (99.7%) over 3252bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3240/3250 (99.7%) over 3252bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f3232/3246 (99.6%) over 3250bp for offset 0 <== THIS IS REAL YGL156W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL156W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1185 (0.3%). Conflicting: 5/1185 (0.4%). NoInfo: 3/1185 (0.3%). Certain keep: 1173/1185 (99.0%) ########################## YGL155W (1131bp = 377AA) has 5 hits (CDC43) polypeptide subunit of a yeast type ..ransferase (115) Spar (test2) orthologous hit at 88% f1114/1120 (99.5%) over 1122bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1107/1112 (99.6%) over 1114bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1116/1128 (98.9%) over 1131bp for offset 0 <== THIS IS REAL YGL155W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL155W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1186 (0.3%). Conflicting: 5/1186 (0.4%). NoInfo: 3/1186 (0.3%). Certain keep: 1174/1186 (99.0%) ########################## YGL154C (819bp = 273AA) has 5 hits (LYS5) aminoadipate-semialdehyde dehydrogenas..reductase) (126) Spar (test2) orthologous hit at 86% f819/819 (100.0%) over 819bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f819/819 (100.0%) over 819bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f354/476 (74.4%) over 480bp for offset 0 Sbay (test3) Longest island has f96 at 73% over 367bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800819 |_________|__________|__________|__________|__________|__________|__________|__________|__| 96f 73% 367bp Sb399brk |=======================================>...........> | YGL154C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL154C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1187 (0.3%). Conflicting: 5/1187 (0.4%). NoInfo: 3/1187 (0.3%). Certain keep: 1175/1187 (99.0%) ########################## YGL153W (1026bp = 342AA) has 14 hits (PEX14) component of peroxisomal import machinery Flanking ORFs are: YGL155W and YGL153W. YGL153W skipped ########################## YGL151W (3399bp = 1133AA) has 40 hits (NUT1) negative regulator of HO endonuclease Spar (test2) non-orthologous hit at 89% f3391/3398 (99.8%) over 3399bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3376/3393 (99.5%) over 3399bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1213/1504 (80.7%) over 1528bp for offset 2 Sbay (test3) Longest island has f98 at 82% over 1072bp <== THIS IS REAL 0 1002030040050600700809001k 1k1k 1k 1k1k 1k 1k1k 1k2k 2k 2k2k 2k 2k2k 2k 2k2k 3k 3k3k 3k 3k |_|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__| 98f 82% 1072bp Sb398brk ||ooooooooooooooooooooooooooo>..........>| YGL151W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL151W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1188 (0.3%). Conflicting: 5/1188 (0.4%). NoInfo: 3/1188 (0.3%). Certain keep: 1176/1188 (99.0%) ########################## YGL150C (4470bp = 1490AA) has 661 hits (INO80) similar to the Snf2p family of DN..nt ATPases (99) Flanking ORFs are: YGL152C and YGL150C. YGL150C skipped ########################## YGL148W (1131bp = 377AA) has 4 hits (ARO2) Chorismate synthase Spar (test2) orthologous hit at 92% f975/975 (100.0%) over 975bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1130/1130 (100.0%) over 1130bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1131/1131 (100.0%) over 1131bp for offset 0 <== THIS IS REAL YGL148W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL148W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1189 (0.3%). Conflicting: 5/1189 (0.4%). NoInfo: 3/1189 (0.3%). Certain keep: 1177/1189 (99.0%) ########################## YGL147C (576bp = 192AA) has 9 hits (RPL9A) Ribosomal protein L9A (L8A) (rp24) (YL11) Spar (test2) orthologous hit at 96% f576/576 (100.0%) over 576bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f576/576 (100.0%) over 576bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f576/576 (100.0%) over 576bp for offset 0 <== THIS IS REAL YGL147C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL147C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1190 (0.3%). Conflicting: 5/1190 (0.4%). NoInfo: 3/1190 (0.3%). Certain keep: 1178/1190 (99.0%) ########################## YGL145W (2106bp = 702AA) has 33 hits (TIP20) transport protein that interacts wi.. apparatus (175) Spar (test2) orthologous hit at 87% f2099/2104 (99.8%) over 2105bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2071/2094 (98.9%) over 2106bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1641/1844 (89.0%) over 1865bp for offset 2 Sbay (test3) Longest island has f96 at 76% over 1658bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 22k |___|___|___|____|___|___|___|____|___|___|____|___|___|___|____|___|___|___|____|___|___|| 96f 76% 1658bp Sb398full |=====================================================================>........> | YGL145W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL145W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1191 (0.3%). Conflicting: 5/1191 (0.4%). NoInfo: 3/1191 (0.3%). Certain keep: 1179/1191 (99.0%) ########################## YGL143C (1242bp = 414AA) has 7 hits (MRF1) Mitochondrial polypeptide chain release factor Spar (test2) orthologous hit at 90% f1242/1242 (100.0%) over 1242bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1242/1242 (100.0%) over 1242bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1234/1240 (99.5%) over 1242bp for offset 0 <== THIS IS REAL YGL143C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL143C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1192 (0.3%). Conflicting: 5/1192 (0.4%). NoInfo: 3/1192 (0.3%). Certain keep: 1180/1192 (99.0%) ########################## YGL142C (1851bp = 617AA) has 8 hits (GPI10) Protein involved in Glycosyl Phospha..structure. (286) Spar (test2) orthologous hit at 86% f1838/1848 (99.5%) over 1851bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1823/1845 (98.8%) over 1850bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1621/1729 (93.8%) over 1734bp for offset 0 <== THIS IS REAL YGL142C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL142C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1193 (0.3%). Conflicting: 5/1193 (0.4%). NoInfo: 3/1193 (0.3%). Certain keep: 1181/1193 (99.0%) ########################## YGL141W (2733bp = 911AA) has 16 hits (HUL5) ubiquitin-protein ligase (E3) Spar (test2) orthologous hit at 89% f2733/2733 (100.0%) over 2733bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2718/2730 (99.6%) over 2733bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2695/2725 (98.9%) over 2733bp for offset 0 <== THIS IS REAL YGL141W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL141W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1194 (0.3%). Conflicting: 5/1194 (0.4%). NoInfo: 3/1194 (0.3%). Certain keep: 1182/1194 (99.0%) ########################## YGL136C (963bp = 321AA) has 5 hits (MRM2) 2'O-ribose methyltransferase Spar (test2) orthologous hit at 90% f963/963 (100.0%) over 963bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f961/961 (100.0%) over 961bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f949/959 (99.0%) over 961bp for offset 0 <== THIS IS REAL YGL136C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL136C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1195 (0.3%). Conflicting: 5/1195 (0.4%). NoInfo: 3/1195 (0.3%). Certain keep: 1183/1195 (99.0%) ########################## YGL135W (654bp = 218AA) has 9 hits (RPL1B) Ribosomal protein L1B Spar (test2) orthologous hit at 98% f654/654 (100.0%) over 654bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f654/654 (100.0%) over 654bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f654/654 (100.0%) over 654bp for offset 0 <== THIS IS REAL YGL135W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL135W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1196 (0.3%). Conflicting: 5/1196 (0.4%). NoInfo: 3/1196 (0.3%). Certain keep: 1184/1196 (99.0%) ########################## YGL134W (1302bp = 434AA) has 13 hits (PCL10) PHO85 cyclin Spar (test2) orthologous hit at 89% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1273/1299 (98.0%) over 1302bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f607/615 (98.7%) over 616bp for offset 0 <== THIS IS REAL YGL134W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL134W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1197 (0.3%). Conflicting: 5/1197 (0.4%). NoInfo: 3/1197 (0.3%). Certain keep: 1185/1197 (99.0%) ########################## YGL133W (3795bp = 1265AA) has 35 hits (ITC1) A subunit of Isw2 chromatin remodel..ng complex (91) Spar (test2) non-orthologous hit at 87% f1933/1942 (99.5%) over 1946bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2460/2580 (95.3%) over 2604bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1933/2047 (94.4%) over 2068bp for offset 2 <== THIS IS REAL YGL133W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL133W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1198 (0.3%). Conflicting: 5/1198 (0.4%). NoInfo: 3/1198 (0.3%). Certain keep: 1186/1198 (99.0%) ########################## YGL130W (1380bp = 460AA) has 5 hits (CEG1) mRNA guanylyltransferase (mRNA cappin..ha subunit (104) Spar (test2) orthologous hit at 92% f1380/1380 (100.0%) over 1380bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1373/1378 (99.6%) over 1379bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1379/1379 (100.0%) over 1379bp for offset 0 <== THIS IS REAL YGL130W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL130W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1199 (0.3%). Conflicting: 5/1199 (0.4%). NoInfo: 3/1199 (0.3%). Certain keep: 1187/1199 (99.0%) ########################## YGL129C (1467bp = 489AA) has 15 hits (RSM23) mitochondrial ribosome small subuni.. component (91) Spar (test2) orthologous hit at 88% f1367/1450 (94.3%) over 1452bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1361/1449 (93.9%) over 1460bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1397/1456 (95.9%) over 1461bp for offset 2 <== THIS IS REAL YGL129C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL129C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1200 (0.3%). Conflicting: 5/1200 (0.4%). NoInfo: 3/1200 (0.2%). Certain keep: 1188/1200 (99.0%) ########################## YGL128C (1044bp = 348AA) has 321 hits (CWC23) Protein required for cell viability Spar (test2) orthologous hit at 85% f934/1043 (89.5%) over 1044bp for offset 0 Spar (test3) Longest island has f100 at 87% over 900bp <== THIS IS REAL Smik (test2) orthologous hit at 78% f956/1027 (93.1%) over 1033bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f683/1025 (66.6%) over 1032bp for offset 1 Sbay (test3) Longest island has f97 at 74% over 681bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|________|_______|________|________|_______|________|_______|________|________|___| 100f 87% 900bp Sp23full |...........|=============================================================================| 97f 74% 681bp Sb397full |...............|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooo>.............>| YGL128C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL128C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1201 (0.3%). Conflicting: 5/1201 (0.4%). NoInfo: 3/1201 (0.2%). Certain keep: 1189/1201 (99.0%) ########################## YGL127C (384bp = 128AA) has 4 hits (SOH1) SOH1 encodes a novel 14-kD protein wit..tem assay. (220) Spar (test2) orthologous hit at 92% f384/384 (100.0%) over 384bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f384/384 (100.0%) over 384bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f355/355 (100.0%) over 355bp for offset 0 <== THIS IS REAL YGL127C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL127C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1202 (0.3%). Conflicting: 5/1202 (0.4%). NoInfo: 3/1202 (0.2%). Certain keep: 1190/1202 (99.0%) ########################## YGL126W (1143bp = 381AA) has 6 hits (SCS3) involved in inositol biosynthesis Spar (test2) orthologous hit at 89% f1138/1142 (99.6%) over 1143bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1143/1143 (100.0%) over 1143bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 72% f651/751 (86.7%) over 763bp for offset 0 Sbay (test3) Longest island has f98 at 79% over 575bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|_______|______|_______|_______|_______|___| 98f 79% 575bp Sb396brk |..............|oooooooooooooooooooooooooooooooooooooooooooo|> YGL126W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL126W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1203 (0.3%). Conflicting: 5/1203 (0.4%). NoInfo: 3/1203 (0.2%). Certain keep: 1191/1203 (99.0%) ########################## YGL125W (1800bp = 600AA) has 11 hits (MET13) putative methylenetetrahydrofolate ..se (mthfr) (97) Spar (test2) orthologous hit at 91% f1787/1800 (99.3%) over 1800bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1782/1799 (99.1%) over 1800bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f780/788 (99.0%) over 790bp for offset 0 <== THIS IS REAL YGL125W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL125W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1204 (0.3%). Conflicting: 5/1204 (0.4%). NoInfo: 3/1204 (0.2%). Certain keep: 1192/1204 (99.0%) ########################## YGL124C (1935bp = 645AA) has 11 hits (MON1) Product of gene unknown Spar (test2) orthologous hit at 89% f1935/1935 (100.0%) over 1935bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1931/1934 (99.8%) over 1935bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1867/1929 (96.8%) over 1935bp for offset 0 <== THIS IS REAL YGL124C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL124C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1205 (0.3%). Conflicting: 5/1205 (0.4%). NoInfo: 3/1205 (0.2%). Certain keep: 1193/1205 (99.0%) ########################## YGL123W (765bp = 255AA) has 6 hits (RPS2) Ribosomal protein S2 (S4) (rp12) (YS5) Spar (test2) orthologous hit at 98% f765/765 (100.0%) over 765bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f765/765 (100.0%) over 765bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f765/765 (100.0%) over 765bp for offset 0 <== THIS IS REAL YGL123W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL123W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1206 (0.3%). Conflicting: 5/1206 (0.4%). NoInfo: 3/1206 (0.2%). Certain keep: 1194/1206 (99.0%) ########################## YGL122C (1578bp = 526AA) has 530 hits (NAB2) nuclear polyadenylated RNA binding protein Spar (test2) orthologous hit at 87% f1177/1182 (99.6%) over 1189bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1223/1239 (98.7%) over 1241bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1225/1240 (98.8%) over 1248bp for offset 0 <== THIS IS REAL YGL122C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL122C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1207 (0.3%). Conflicting: 5/1207 (0.4%). NoInfo: 3/1207 (0.2%). Certain keep: 1195/1207 (99.0%) ########################## YGL120C (2304bp = 768AA) has 48 hits (PRP43) RNA helicase Spar (test2) orthologous hit at 93% f2304/2304 (100.0%) over 2304bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2304/2304 (100.0%) over 2304bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2293/2300 (99.7%) over 2303bp for offset 0 <== THIS IS REAL YGL120C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL120C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1208 (0.3%). Conflicting: 5/1208 (0.4%). NoInfo: 3/1208 (0.2%). Certain keep: 1196/1208 (99.0%) ########################## YGL119W (1506bp = 502AA) has 8 hits (ABC1) ubiquinol-cytochrome-c reductase asse..ly protein (92) Spar (test2) orthologous hit at 90% f1506/1506 (100.0%) over 1506bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1499/1505 (99.6%) over 1506bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1452/1488 (97.6%) over 1494bp for offset 0 <== THIS IS REAL YGL119W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL119W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1209 (0.3%). Conflicting: 5/1209 (0.4%). NoInfo: 3/1209 (0.2%). Certain keep: 1197/1209 (99.0%) ########################## YGL116W (1833bp = 611AA) has 13 hits (CDC20) anaphase promoting complex subunit Spar (test2) orthologous hit at 91% f1832/1833 (99.9%) over 1833bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1825/1832 (99.6%) over 1833bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f950/952 (99.8%) over 952bp for offset 0 <== THIS IS REAL YGL116W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL116W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1210 (0.3%). Conflicting: 5/1210 (0.4%). NoInfo: 3/1210 (0.2%). Certain keep: 1198/1210 (99.0%) ########################## YGL115W (969bp = 323AA) has 5 hits (SNF4) associates with Snf1p Spar (test2) orthologous hit at 92% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL YGL115W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL115W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1211 (0.3%). Conflicting: 5/1211 (0.4%). NoInfo: 3/1211 (0.2%). Certain keep: 1199/1211 (99.0%) ########################## YGL113W (2007bp = 669AA) has 24 hits (SLD3) involved in initiation of DNA replication Spar (test2) orthologous hit at 87% f1918/1927 (99.5%) over 1928bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1908/1923 (99.2%) over 1929bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1812/1980 (91.5%) over 2005bp for offset 0 <== THIS IS REAL YGL113W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL113W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1212 (0.3%). Conflicting: 5/1212 (0.4%). NoInfo: 3/1212 (0.2%). Certain keep: 1200/1212 (99.0%) ########################## YGL112C (1551bp = 517AA) has 10 hits (TAF6) TATA-binding protein-associated-factor Spar (test2) orthologous hit at 91% f1551/1551 (100.0%) over 1551bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1550/1550 (100.0%) over 1550bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1539/1547 (99.5%) over 1549bp for offset 0 <== THIS IS REAL YGL112C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL112C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1213 (0.3%). Conflicting: 5/1213 (0.4%). NoInfo: 3/1213 (0.2%). Certain keep: 1201/1213 (99.0%) ########################## YGL111W (1392bp = 464AA) has 4 hits (NSA1) ribosome biogenesis protein Spar (test2) orthologous hit at 86% f1389/1391 (99.9%) over 1392bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1368/1388 (98.6%) over 1391bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1339/1383 (96.8%) over 1392bp for offset 0 <== THIS IS REAL YGL111W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL111W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1214 (0.3%). Conflicting: 5/1214 (0.4%). NoInfo: 3/1214 (0.2%). Certain keep: 1202/1214 (99.0%) ########################## YGL106W (450bp = 150AA) has 8 hits (MLC1) light chain for myosin Myo2p Spar (test2) orthologous hit at 90% f450/450 (100.0%) over 450bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f450/450 (100.0%) over 450bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f450/450 (100.0%) over 450bp for offset 0 <== THIS IS REAL YGL106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1215 (0.3%). Conflicting: 5/1215 (0.4%). NoInfo: 3/1215 (0.2%). Certain keep: 1203/1215 (99.0%) ########################## YGL105W (1131bp = 377AA) has 12 hits (ARC1) G4 nucleic acid binding protein, inv..oacylation (108) Spar (test2) orthologous hit at 94% f1131/1131 (100.0%) over 1131bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1128/1130 (99.8%) over 1131bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1130/1131 (99.9%) over 1131bp for offset 0 <== THIS IS REAL YGL105W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL105W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1216 (0.3%). Conflicting: 5/1216 (0.4%). NoInfo: 3/1216 (0.2%). Certain keep: 1204/1216 (99.0%) ########################## YGL104C (1461bp = 487AA) has 16 hits (VPS73) Spar (test2) orthologous hit at 89% f964/1456 (66.2%) over 1456bp for offset 0 Spar (test3) Longest island has f100 at 90% over 964bp <== THIS IS REAL Smik (test2) orthologous hit at 84% f1437/1443 (99.6%) over 1443bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1450/1450 (100.0%) over 1450bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|______|_____|_____|_____|_____|_____|______|_____|___| 100f 90% 964bp 100f 89% 492bp Sp22full |==========================================================|ooooooooooooooooooooooooooooo>| YGL104C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL104C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1217 (0.3%). Conflicting: 5/1217 (0.4%). NoInfo: 3/1217 (0.2%). Certain keep: 1205/1217 (99.0%) ########################## YGL100W (1050bp = 350AA) has 8 hits (SEH1) nuclear pore protein Spar (test2) orthologous hit at 90% f1050/1050 (100.0%) over 1050bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1050/1050 (100.0%) over 1050bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1045/1049 (99.6%) over 1050bp for offset 0 <== THIS IS REAL YGL100W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL100W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1218 (0.3%). Conflicting: 5/1218 (0.4%). NoInfo: 3/1218 (0.2%). Certain keep: 1206/1218 (99.0%) ########################## YGL099W (1923bp = 641AA) has 12 hits (LSG1) Hypothetical ORF Spar (test2) orthologous hit at 90% f1090/1091 (99.9%) over 1094bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1923/1923 (100.0%) over 1923bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1918/1921 (99.8%) over 1922bp for offset 0 <== THIS IS REAL YGL099W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL099W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1219 (0.3%). Conflicting: 5/1219 (0.4%). NoInfo: 3/1219 (0.2%). Certain keep: 1207/1219 (99.0%) ########################## YGL097W (1449bp = 483AA) has 5 hits (SRM1) pheromone response pathway suppressor Spar (test2) orthologous hit at 89% f1449/1449 (100.0%) over 1449bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1442/1448 (99.6%) over 1449bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1432/1446 (99.0%) over 1449bp for offset 0 <== THIS IS REAL YGL097W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL097W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1220 (0.3%). Conflicting: 5/1220 (0.4%). NoInfo: 3/1220 (0.2%). Certain keep: 1208/1220 (99.0%) ########################## YGL096W (831bp = 277AA) has 5 hits (TOS8) Hypothetical ORF Spar (test2) orthologous hit at 87% f827/830 (99.6%) over 831bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f813/823 (98.8%) over 831bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f751/817 (91.9%) over 831bp for offset 0 <== THIS IS REAL YGL096W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL096W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1221 (0.3%). Conflicting: 5/1221 (0.4%). NoInfo: 3/1221 (0.2%). Certain keep: 1209/1221 (99.0%) ########################## YGL095C (1734bp = 578AA) has 14 hits (VPS45) cytosolic and peripheral membrane protein Spar (test2) orthologous hit at 90% f1734/1734 (100.0%) over 1734bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1725/1733 (99.5%) over 1734bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1698/1717 (98.9%) over 1721bp for offset 0 <== THIS IS REAL YGL095C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL095C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1222 (0.3%). Conflicting: 5/1222 (0.4%). NoInfo: 3/1222 (0.2%). Certain keep: 1210/1222 (99.0%) ########################## YGL094C (3348bp = 1116AA) has 10 hits (PAN2) 135-kDa protein that is subunit of ..bonuclease (100) Spar (test2) orthologous hit at 90% f3348/3348 (100.0%) over 3348bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3331/3344 (99.6%) over 3347bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f3347/3347 (100.0%) over 3347bp for offset 0 <== THIS IS REAL YGL094C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL094C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1223 (0.3%). Conflicting: 5/1223 (0.4%). NoInfo: 3/1223 (0.2%). Certain keep: 1211/1223 (99.0%) ########################## YGL093W (2754bp = 918AA) has 16 hits (SPC105) component of spindle pole Spar (test2) orthologous hit at 85% f2740/2751 (99.6%) over 2754bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f2708/2745 (98.7%) over 2753bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1802/1856 (97.1%) over 1871bp for offset 0 <== THIS IS REAL YGL093W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL093W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1224 (0.3%). Conflicting: 5/1224 (0.4%). NoInfo: 3/1224 (0.2%). Certain keep: 1212/1224 (99.0%) ########################## YGL092W (3954bp = 1318AA) has 21 hits (NUP145) nuclear pore protein Spar (test2) orthologous hit at 86% f3921/3947 (99.3%) over 3954bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f3476/3582 (97.0%) over 3597bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 75% f1343/1424 (94.3%) over 1428bp for offset 2 <== THIS IS REAL YGL092W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL092W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1225 (0.3%). Conflicting: 5/1225 (0.4%). NoInfo: 3/1225 (0.2%). Certain keep: 1213/1225 (99.0%) ########################## YGL091C (987bp = 329AA) has 6 hits (NBP35) 35 kDa nucleotide binding protein Spar (test2) orthologous hit at 92% f986/986 (100.0%) over 986bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f986/986 (100.0%) over 986bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f986/986 (100.0%) over 986bp for offset 0 <== THIS IS REAL YGL091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1226 (0.3%). Conflicting: 5/1226 (0.4%). NoInfo: 3/1226 (0.2%). Certain keep: 1214/1226 (99.0%) ########################## YGL090W (1266bp = 422AA) has 24 hits (LIF1) interacts with DNA ligase protein Spar (test2) orthologous hit at 80% f1074/1189 (90.3%) over 1203bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1229/1257 (97.8%) over 1265bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f772/798 (96.7%) over 802bp for offset 0 <== THIS IS REAL YGL090W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL090W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1227 (0.3%). Conflicting: 5/1227 (0.4%). NoInfo: 3/1227 (0.2%). Certain keep: 1215/1227 (99.0%) ########################## YGL089C (363bp = 121AA) has 23 hits (MF(ALPHA)2) alpha mating factor Spar (test2) orthologous hit at 88% f361/361 (100.0%) over 361bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f348/358 (97.2%) over 363bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 76% f317/319 (99.4%) over 320bp for offset 0 <== THIS IS REAL YGL089C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL089C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1228 (0.3%). Conflicting: 5/1228 (0.4%). NoInfo: 3/1228 (0.2%). Certain keep: 1216/1228 (99.0%) ########################## YGL086W (2250bp = 750AA) has 1087 hits (MAD1) coiled-coil protein involved in th..checkpoint (109) Spar (test2) orthologous hit at 70% f1381/1941 (71.1%) over 1998bp for offset 1 Spar (test3) Longest island has f98 at 87% over 1059bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f2159/2183 (98.9%) over 2189bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f948/1249 (75.9%) over 1271bp for offset 2 Sbay (test3) Longest island has f100 at 80% over 860bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k2k |___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|_| 98f 87% 1059bp Sp22full ||oooooooooooooooooooooooooooooooooooooooooo>...................................> | 100f 80% 860bp Sb388brk |xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>...............> | YGL086W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL086W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1229 (0.3%). Conflicting: 5/1229 (0.4%). NoInfo: 3/1229 (0.2%). Certain keep: 1217/1229 (99.0%) ########################## YGL084C (1683bp = 561AA) has 14 hits (GUP1) putative glycerol transporter Spar (test2) orthologous hit at 90% f1683/1683 (100.0%) over 1683bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1676/1682 (99.6%) over 1683bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1676/1682 (99.6%) over 1683bp for offset 0 <== THIS IS REAL YGL084C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL084C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1230 (0.3%). Conflicting: 5/1230 (0.4%). NoInfo: 3/1230 (0.2%). Certain keep: 1218/1230 (99.0%) ########################## YGL083W (2415bp = 805AA) has 12 hits (SCY1) similar to bovine rhodopsin kinase; ..e mutation (109) Spar (test2) orthologous hit at 87% f2397/2409 (99.5%) over 2414bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2401/2412 (99.5%) over 2414bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1699/2407 (70.6%) over 2414bp for offset 1 Sbay (test3) Longest island has f100 at 81% over 1687bp <== THIS IS REAL 0 100 200 300400 500 600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 22k |__|___|___|__|___|___|___|__|___|___|__|___|___|___|__|___|___|___|__|___|___|__|___|___|| 100f 81% 1687bp 95f 71% 734bp Sb387full |=============================================================|ooooooooooooooooooooooooooo| YGL083W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL083W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1231 (0.3%). Conflicting: 5/1231 (0.4%). NoInfo: 3/1231 (0.2%). Certain keep: 1219/1231 (99.0%) ########################## YGL078C (1572bp = 524AA) has 253 hits (DBP3) ATP-dependent RNA helicase CA3 of t..box family (103) Spar (test2) orthologous hit at 91% f1475/1478 (99.8%) over 1482bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1561/1567 (99.6%) over 1572bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1525/1564 (97.5%) over 1569bp for offset 0 <== THIS IS REAL YGL078C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL078C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1232 (0.3%). Conflicting: 5/1232 (0.4%). NoInfo: 3/1232 (0.2%). Certain keep: 1220/1232 (99.0%) ########################## YGL077C (1692bp = 564AA) has 16 hits (HNM1) Transporter (permease) for choline a.. with UGA4 (125) Spar (test2) orthologous hit at 90% f1692/1692 (100.0%) over 1692bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1682/1689 (99.6%) over 1690bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1692/1692 (100.0%) over 1692bp for offset 0 <== THIS IS REAL YGL077C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL077C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1233 (0.3%). Conflicting: 5/1233 (0.4%). NoInfo: 3/1233 (0.2%). Certain keep: 1221/1233 (99.0%) ########################## YGL075C (1164bp = 388AA) has 7 hits (MPS2) nuclear envelope/ER protein involved ..egregation (106) Spar (test2) orthologous hit at 86% f1158/1162 (99.7%) over 1163bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1130/1157 (97.7%) over 1163bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1102/1147 (96.1%) over 1161bp for offset 2 <== THIS IS REAL YGL075C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL075C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1234 (0.3%). Conflicting: 5/1234 (0.4%). NoInfo: 3/1234 (0.2%). Certain keep: 1222/1234 (99.0%) ########################## YGL073W (2502bp = 834AA) has 41 hits (HSF1) heat shock transcription factor . YGL073W skipped ########################## YGL071W (2073bp = 691AA) has 41 hits (RCS1) Putative transcription factor that b..yPuCACCCPu (115) Spar (test2) orthologous hit at 84% f1809/1903 (95.1%) over 1914bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1932/1962 (98.5%) over 1980bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1796/1982 (90.6%) over 1997bp for offset 0 <== THIS IS REAL YGL071W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL071W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1235 (0.3%). Conflicting: 5/1235 (0.4%). NoInfo: 3/1235 (0.2%). Certain keep: 1223/1235 (99.0%) ########################## YGL070C (369bp = 123AA) has 6 hits (RPB9) RNA polymerase II subunit Spar (test2) orthologous hit at 94% f369/369 (100.0%) over 369bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f369/369 (100.0%) over 369bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f369/369 (100.0%) over 369bp for offset 0 <== THIS IS REAL YGL070C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL070C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1236 (0.3%). Conflicting: 5/1236 (0.4%). NoInfo: 3/1236 (0.2%). Certain keep: 1224/1236 (99.0%) ########################## YGL067W (1155bp = 385AA) has 6 hits (NPY1) NADH pyrophosphatase 1 Spar (test2) orthologous hit at 87% f1155/1155 (100.0%) over 1155bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1150/1154 (99.7%) over 1155bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1147/1153 (99.5%) over 1155bp for offset 0 <== THIS IS REAL YGL067W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL067W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1237 (0.3%). Conflicting: 5/1237 (0.4%). NoInfo: 3/1237 (0.2%). Certain keep: 1225/1237 (99.0%) ########################## YGL066W (1974bp = 658AA) has 889 hits (SGF73) Probable 73KkDa Subunit of SAGA hi..se complex (111) Spar (test2) orthologous hit at 83% f1671/1754 (95.3%) over 1766bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1102/1166 (94.5%) over 1171bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f822/935 (87.9%) over 951bp for offset 0 Sbay (test3) Longest island has f99 at 83% over 663bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|___|____|___|____|____|___|____|___|____|___|____|___|____|____|___|___| 99f 83% 663bp Sb385brk |.|xxxxxxxxxxxxxxxxxxxxxxxxxxxxx>..........> | YGL066W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL066W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1238 (0.3%). Conflicting: 5/1238 (0.4%). NoInfo: 3/1238 (0.2%). Certain keep: 1226/1238 (99.0%) ########################## YGL065C (1512bp = 504AA) has 10 hits (ALG2) glycosyltransferase Spar (test2) orthologous hit at 88% f1497/1509 (99.2%) over 1511bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1501/1510 (99.4%) over 1512bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1504/1511 (99.5%) over 1511bp for offset 0 <== THIS IS REAL YGL065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1239 (0.3%). Conflicting: 5/1239 (0.4%). NoInfo: 3/1239 (0.2%). Certain keep: 1227/1239 (99.0%) ########################## YGL064C (1686bp = 562AA) has 12 hits (MRH4) mitochondrial RNA helicase Spar (test2) orthologous hit at 87% f1686/1686 (100.0%) over 1686bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1644/1680 (97.9%) over 1686bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1498/1532 (97.8%) over 1542bp for offset 0 <== THIS IS REAL YGL064C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL064C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1240 (0.3%). Conflicting: 5/1240 (0.4%). NoInfo: 3/1240 (0.2%). Certain keep: 1228/1240 (99.0%) ########################## YGL063W (1113bp = 371AA) has 6 hits (PUS2) pseudouridine synthase 2 Spar (test2) orthologous hit at 89% f1101/1112 (99.0%) over 1113bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1102/1111 (99.2%) over 1113bp for offset 0 <== THIS IS REAL YGL063W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL063W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1241 (0.3%). Conflicting: 5/1241 (0.4%). NoInfo: 3/1241 (0.2%). Certain keep: 1229/1241 (99.0%) ########################## YGL062W (3537bp = 1179AA) has 25 hits (PYC1) pyruvate carboxylase Spar (test2) orthologous hit at 91% f3537/3537 (100.0%) over 3537bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3537/3537 (100.0%) over 3537bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f3531/3536 (99.9%) over 3537bp for offset 0 <== THIS IS REAL YGL062W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL062W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1242 (0.3%). Conflicting: 5/1242 (0.4%). NoInfo: 3/1242 (0.2%). Certain keep: 1230/1242 (99.0%) ########################## YGL061C (744bp = 248AA) has 21 hits (DUO1) Death Upon Overexpression Spar (test2) orthologous hit at 89% f744/744 (100.0%) over 744bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f735/743 (98.9%) over 744bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f682/740 (92.2%) over 744bp for offset 0 <== THIS IS REAL YGL061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1243 (0.3%). Conflicting: 5/1243 (0.4%). NoInfo: 3/1243 (0.2%). Certain keep: 1231/1243 (99.0%) ########################## YGL058W (519bp = 173AA) has 245 hits (RAD6) Ubiquitin conjugating (E2) enzyme. T..tagenesis. (217) Spar (test2) orthologous hit at 92% f513/513 (100.0%) over 519bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f516/516 (100.0%) over 519bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f518/519 (99.8%) over 519bp for offset 0 <== THIS IS REAL YGL058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1244 (0.3%). Conflicting: 5/1244 (0.4%). NoInfo: 3/1244 (0.2%). Certain keep: 1232/1244 (99.0%) ########################## YGL056C (1584bp = 528AA) has 10 hits (SDS23) similar to S. pombe sds23 Spar (test2) orthologous hit at 91% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1576/1583 (99.6%) over 1584bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1381/1400 (98.6%) over 1403bp for offset 0 <== THIS IS REAL YGL056C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL056C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1245 (0.3%). Conflicting: 5/1245 (0.4%). NoInfo: 3/1245 (0.2%). Certain keep: 1233/1245 (99.0%) ########################## YGL055W (1533bp = 511AA) has 9 hits (OLE1) delta-9-fatty acid desaturase Spar (test2) orthologous hit at 94% f1533/1533 (100.0%) over 1533bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1533/1533 (100.0%) over 1533bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f133/133 (100.0%) over 133bp for offset 0 Sbay (test3) Longest island has f100 at 92% over 133bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k1k |____|_____|_____|_____|_____|_____|_____|____|_____|_____|_____|_____|_____|_____|_____|_| 100f 92%Sb382brk |=======| YGL055W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YGL055W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 4/1246 (0.3%). Conflicting: 5/1246 (0.4%). NoInfo: 3/1246 (0.2%). Certain keep: 1234/1246 (99.0%) ########################## YGL054C (417bp = 139AA) has 11 hits (ERV14) 14 KDa protein found on ER-derived vesicles Spar (test2) orthologous hit at 92% f417/417 (100.0%) over 417bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f417/417 (100.0%) over 417bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 86% f417/417 (100.0%) over 417bp for offset 0 <== THIS IS REAL YGL054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1247 (0.3%). Conflicting: 5/1247 (0.4%). NoInfo: 3/1247 (0.2%). Certain keep: 1235/1247 (99.0%) ########################## YGL053W (714bp = 238AA) has 39 hits (PRM8) Spar (test2) non-orthologous hit at 75% f641/703 (91.2%) over 713bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 66% f593/697 (85.1%) over 713bp for offset 0 Smik (test3) Longest island has f84 at 69% over 424bp Smik (test2) non-orthologous hit at 64% f334/692 (48.3%) over 708bp for offset 1 Smik (test3) Longest island has f92 at 71% over 177bp Smik (test2) non-orthologous hit at 62% f605/684 (88.5%) over 702bp for offset 0 Smik (test3) Longest island has f86 at 61% over 314bp Smik (test2) non-orthologous hit at 61% f581/682 (85.2%) over 701bp for offset 0 Smik (test3) Longest island has f88 at 64% over 493bp Sbay (test2) non-orthologous hit at 62% f358/668 (53.6%) over 687bp for offset 1 Sbay (test3) Longest island has f87 at 57% over 191bp Sbay (test2) non-orthologous hit at 61% f469/540 (86.9%) over 553bp for offset 0 Sbay (test3) Longest island has f92 at 60% over 219bp Sbay (test2) non-orthologous hit at 63% f339/431 (78.7%) over 442bp for offset 0 Sbay (test3) Longest island has f89 at 65% over 287bp Sbay (test2) non-orthologous hit at 65% f209/271 (77.1%) over 275bp for offset 2 Sbay (test3) Longest island has f89 at 68% over 235bp 0 100 200 300 400 500 600 70714 |___________|____________|___________|____________|____________|___________|____________|_| 97f 67% 233bp 84f 69% 424bp Sm949full |============================>.........|==================================================|=> 92f 71% 177bp 95f 70% 93bp 100f 77% 98bp 94f 53% 87bp Sm949full |=====================>.|xxxxxxxxxx>...........|xxxxxxxxxxx>......|xxxxxxxxxx>...........>| 94f 66% 283bp 86f 61% 314bp Sm949full |==================================>..|=======================================>.........> | 88f 64% 493bp Sm215full ||xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>........................> | 87f 57% 191bp 91f 76% 144bp 80f 6283f 59% 101bp 79f 68% 8Sb579full |...|ooooooooooooooooooooooo>...........|ooooooooooooooooo|=====|xxxxxxxxxxxx>.|xxxxxxxx|> 92f 60% 219bp 97f 74% 173bp 100f 50% 64bp Sb98full |===========================>.......|=====================>....|=======> | 81f 59% 37bp5% 287bp 84f 62% 5Sb957full |..|xxxx>.|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>...|xxxxxx> | 89f 68% 235bp 100f 52% 27bp Sb94full |.|xxxxxxxxxxxxxxxxxxxxxxxxxxxxx|oo> | YGL053W: kill: - keep: Spar YGL053W - Not enough info. Kill () and Keep (Spar) Current total: Certain kills: 4/1248 (0.3%). Conflicting: 5/1248 (0.4%). NoInfo: 4/1248 (0.3%). Certain keep: 1235/1248 (99.0%) ########################## YGL049C (2745bp = 915AA) has 38 hits (TIF4632) TIF4632 encodes one of two homolo..x (eIF-4F) (153) Spar (test2) orthologous hit at 89% f2541/2553 (99.5%) over 2557bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2721/2735 (99.5%) over 2745bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1688/1748 (96.6%) over 1751bp for offset 0 <== THIS IS REAL YGL049C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL049C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1249 (0.3%). Conflicting: 5/1249 (0.4%). NoInfo: 4/1249 (0.3%). Certain keep: 1236/1249 (99.0%) ########################## YGL048C (1218bp = 406AA) has 49 hits (RPT6) ATPase Spar (test2) orthologous hit at 92% f1218/1218 (100.0%) over 1218bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1218/1218 (100.0%) over 1218bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1216/1216 (100.0%) over 1216bp for offset 0 <== THIS IS REAL YGL048C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL048C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1250 (0.3%). Conflicting: 5/1250 (0.4%). NoInfo: 4/1250 (0.3%). Certain keep: 1237/1250 (99.0%) ########################## YGL044C (891bp = 297AA) has 206 hits (RNA15) component of the cleavage and polya..processing (141) Spar (test2) orthologous hit at 89% f568/582 (97.6%) over 583bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f580/599 (96.8%) over 599bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f550/586 (93.9%) over 589bp for offset 1 <== THIS IS REAL YGL044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1251 (0.3%). Conflicting: 5/1251 (0.4%). NoInfo: 4/1251 (0.3%). Certain keep: 1238/1251 (99.0%) ########################## YGL043W (930bp = 310AA) has 9 hits (DST1) RNA polymerase II elongation factor Flanking ORFs are: YGL045W and YGL043W. YGL043W skipped ########################## YGL040C (1029bp = 343AA) has 4 hits (HEM2) delta-aminolevulinate dehydratase (po.. synthase) (103) Spar (test2) orthologous hit at 91% f1029/1029 (100.0%) over 1029bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1029/1029 (100.0%) over 1029bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f1024/1028 (99.6%) over 1029bp for offset 0 <== THIS IS REAL YGL040C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL040C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1252 (0.3%). Conflicting: 5/1252 (0.4%). NoInfo: 4/1252 (0.3%). Certain keep: 1239/1252 (99.0%) ########################## YGL038C (1443bp = 481AA) has 5 hits (OCH1) membrane-bound alpha-1,6-mannosyltransferase Spar (test2) orthologous hit at 88% f1443/1443 (100.0%) over 1443bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1422/1436 (99.0%) over 1441bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f778/1427 (54.5%) over 1443bp for offset 1 Sbay (test3) Longest island has f97 at 79% over 797bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|______|_____|_____|_____|______|_____|_____|_____|______|_____|__| 96f 76% 656bp 97f 79% 797bp Sb76full |=======================================>|oooooooooooooooooooooooooooooooooooooooooooooooo| YGL038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1253 (0.3%). Conflicting: 5/1253 (0.4%). NoInfo: 4/1253 (0.3%). Certain keep: 1240/1253 (99.0%) ########################## YGL037C (651bp = 217AA) has 5 hits (PNC1) pyrazinamidase and nicotinamidase Spar (test2) orthologous hit at 92% f650/650 (100.0%) over 650bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f651/651 (100.0%) over 651bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f651/651 (100.0%) over 651bp for offset 0 <== THIS IS REAL YGL037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1254 (0.3%). Conflicting: 5/1254 (0.4%). NoInfo: 4/1254 (0.3%). Certain keep: 1241/1254 (99.0%) ########################## YGL035C (1515bp = 505AA) has 32 hits (MIG1) C2H2 zinc finger protein which resem..r proteins (128) Spar (test2) orthologous hit at 89% f1333/1333 (100.0%) over 1333bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1507/1509 (99.9%) over 1515bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1115/1254 (88.9%) over 1274bp for offset 0 Sbay (test3) Longest island has f97 at 77% over 544bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 11k |____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|| 97f 77% 544bp 95f 78% 532bp Sb76full |===============================>............|===============================> | YGL035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1255 (0.3%). Conflicting: 5/1255 (0.4%). NoInfo: 4/1255 (0.3%). Certain keep: 1242/1255 (99.0%) ########################## YGL032C (264bp = 88AA) has 5 hits (AGA2) adhesion subunit of a-agglutinin Spar (test2) orthologous hit at 83% f253/262 (96.6%) over 264bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f260/263 (98.9%) over 264bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f241/261 (92.3%) over 264bp for offset 0 <== THIS IS REAL YGL032C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL032C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1256 (0.3%). Conflicting: 5/1256 (0.4%). NoInfo: 4/1256 (0.3%). Certain keep: 1243/1256 (99.0%) ########################## YGL031C (468bp = 156AA) has 41 hits (RPL24A) Ribosomal protein L24A (rp29) (YL21) (L30A) Spar (test2) orthologous hit at 96% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL YGL031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1257 (0.3%). Conflicting: 5/1257 (0.4%). NoInfo: 4/1257 (0.3%). Certain keep: 1244/1257 (99.0%) ########################## YGL029W (363bp = 121AA) has 90 hits (CGR1) coiled-coil protein Spar (test2) orthologous hit at 93% f362/362 (100.0%) over 362bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f358/361 (99.2%) over 362bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f362/362 (100.0%) over 362bp for offset 0 <== THIS IS REAL YGL029W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL029W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1258 (0.3%). Conflicting: 5/1258 (0.4%). NoInfo: 4/1258 (0.3%). Certain keep: 1245/1258 (99.0%) ########################## YGL028C (1629bp = 543AA) has 490 hits (SCW11) soluble cell wall protein Spar (test2) orthologous hit at 85% f973/992 (98.1%) over 995bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 81% f872/928 (94.0%) over 933bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1106/1202 (92.0%) over 1216bp for offset 0 <== THIS IS REAL YGL028C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL028C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1259 (0.3%). Conflicting: 5/1259 (0.4%). NoInfo: 4/1259 (0.3%). Certain keep: 1246/1259 (99.0%) ########################## YGL027C (2502bp = 834AA) has 10 hits (CWH41) glucosidase I Spar (test2) orthologous hit at 90% f2502/2502 (100.0%) over 2502bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2498/2501 (99.9%) over 2502bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2487/2498 (99.6%) over 2502bp for offset 0 <== THIS IS REAL YGL027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1260 (0.3%). Conflicting: 5/1260 (0.4%). NoInfo: 4/1260 (0.3%). Certain keep: 1247/1260 (99.0%) ########################## YGL026C (2124bp = 708AA) has 6 hits (TRP5) tryptophan synthetase Spar (test2) orthologous hit at 92% f1801/1801 (100.0%) over 1801bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2124/2124 (100.0%) over 2124bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2113/2119 (99.7%) over 2124bp for offset 0 <== THIS IS REAL YGL026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1261 (0.3%). Conflicting: 5/1261 (0.4%). NoInfo: 4/1261 (0.3%). Certain keep: 1248/1261 (99.0%) ########################## YGL025C (1296bp = 432AA) has 319 hits (PGD1) RNA polymerase II mediator subunit Flanking ORFs are: YGL027C and YGL025C. YGL025C skipped ########################## YGL023C (1908bp = 636AA) has 17 hits (PIB2) similar to Fab1 and Vps27; involved ..expression (130) Spar (test2) orthologous hit at 88% f1908/1908 (100.0%) over 1908bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1147/1222 (93.9%) over 1230bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f997/1126 (88.5%) over 1139bp for offset 0 Sbay (test3) Longest island has f97 at 76% over 964bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 11k |___|____|____|___|____|____|____|___|____|____|___|____|____|____|___|____|____|___|____|| 97f 76% 964bp Sb76brk |=============================================>.......> | YGL023C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL023C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1262 (0.3%). Conflicting: 5/1262 (0.4%). NoInfo: 4/1262 (0.3%). Certain keep: 1249/1262 (99.0%) ########################## YGL022W (2157bp = 719AA) has 5 hits (STT3) Putative integral ER membrane protein..se complex (130) Spar (test2) orthologous hit at 92% f2157/2157 (100.0%) over 2157bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2157/2157 (100.0%) over 2157bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f2147/2155 (99.6%) over 2157bp for offset 0 <== THIS IS REAL YGL022W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL022W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1263 (0.3%). Conflicting: 5/1263 (0.4%). NoInfo: 4/1263 (0.3%). Certain keep: 1250/1263 (99.0%) ########################## YGL021W (2283bp = 761AA) has 15 hits (ALK1) Spar (test2) orthologous hit at 88% f2254/2278 (98.9%) over 2279bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1552/1564 (99.2%) over 1566bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1672/1699 (98.4%) over 1703bp for offset 0 <== THIS IS REAL YGL021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1264 (0.3%). Conflicting: 5/1264 (0.4%). NoInfo: 4/1264 (0.3%). Certain keep: 1251/1264 (99.0%) ########################## YGL019W (837bp = 279AA) has 92 hits (CKB1) beta (38kDa) subunit of casein kinase II (CKII) Spar (test2) orthologous hit at 93% f837/837 (100.0%) over 837bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f837/837 (100.0%) over 837bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f824/834 (98.8%) over 837bp for offset 0 <== THIS IS REAL YGL019W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL019W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1265 (0.3%). Conflicting: 5/1265 (0.4%). NoInfo: 4/1265 (0.3%). Certain keep: 1252/1265 (99.0%) ########################## YGL018C (555bp = 185AA) has 6 hits (JAC1) member of the 20-kDa J-protein family ..ne protein (143) Spar (test2) orthologous hit at 89% f555/555 (100.0%) over 555bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f554/554 (100.0%) over 554bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f554/554 (100.0%) over 554bp for offset 0 <== THIS IS REAL YGL018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1266 (0.3%). Conflicting: 5/1266 (0.4%). NoInfo: 4/1266 (0.3%). Certain keep: 1253/1266 (99.0%) ########################## YGL017W (1512bp = 504AA) has 6 hits (ATE1) arginyl-tRNA-protein transferase Spar (test2) orthologous hit at 88% f1508/1511 (99.8%) over 1512bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1503/1510 (99.5%) over 1512bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1458/1504 (96.9%) over 1512bp for offset 0 <== THIS IS REAL YGL017W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL017W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1267 (0.3%). Conflicting: 5/1267 (0.4%). NoInfo: 4/1267 (0.3%). Certain keep: 1254/1267 (99.0%) ########################## YGL016W (3246bp = 1082AA) has 19 hits (KAP122) karyopherin-beta family protein Spar (test2) orthologous hit at 91% f1774/1774 (100.0%) over 1774bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3246/3246 (100.0%) over 3246bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f3223/3240 (99.5%) over 3244bp for offset 0 <== THIS IS REAL YGL016W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL016W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1268 (0.3%). Conflicting: 5/1268 (0.4%). NoInfo: 4/1268 (0.3%). Certain keep: 1255/1268 (99.0%) ########################## YGL014W (2667bp = 889AA) has 502 hits (PUF4) YGL014W Spar (test2) orthologous hit at 88% f1386/1399 (99.1%) over 1400bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1629/1662 (98.0%) over 1676bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1606/1633 (98.3%) over 1652bp for offset 0 <== THIS IS REAL YGL014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1269 (0.3%). Conflicting: 5/1269 (0.4%). NoInfo: 4/1269 (0.3%). Certain keep: 1256/1269 (99.0%) ########################## YGL013C (3207bp = 1069AA) has 486 hits (PDR1) zinc-finger transcription factor o..omain type (128) Spar (test2) orthologous hit at 90% f1920/2667 (72.0%) over 2672bp for offset 0 Spar (test3) Longest island has f100 at 91% over 1906bp <== THIS IS REAL Smik (test2) orthologous hit at 83% f3017/3079 (98.0%) over 3088bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2982/3174 (94.0%) over 3201bp for offset 0 <== THIS IS REAL 0 100200300400506007008009001k1k 1k 1k 1k 1k1k 1k 1k 1k 2k2k 2k 2k 2k 2k2k 2k 2k 2k 3k3k 33k |_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|| 100f 91% 1906bp 100f 89% 744bp Sp14brk |====================================================|oooooooooooooooooooo> | YGL013C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL013C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1270 (0.3%). Conflicting: 5/1270 (0.4%). NoInfo: 4/1270 (0.3%). Certain keep: 1257/1270 (99.0%) ########################## YGL012W (1422bp = 474AA) has 4 hits (ERG4) Sterol C-24 reductase Spar (test2) orthologous hit at 90% f1422/1422 (100.0%) over 1422bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1422/1422 (100.0%) over 1422bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1412/1419 (99.5%) over 1421bp for offset 0 <== THIS IS REAL YGL012W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL012W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1271 (0.3%). Conflicting: 5/1271 (0.4%). NoInfo: 4/1271 (0.3%). Certain keep: 1258/1271 (99.0%) ########################## YGL011C (759bp = 253AA) has 6 hits (SCL1) Proteasome subunit YC7alpha/Y8 (protea..subunit 7) (98) Spar (test2) orthologous hit at 91% f759/759 (100.0%) over 759bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f759/759 (100.0%) over 759bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f553/553 (100.0%) over 553bp for offset 0 <== THIS IS REAL YGL011C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL011C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1272 (0.3%). Conflicting: 5/1272 (0.4%). NoInfo: 4/1272 (0.3%). Certain keep: 1259/1272 (99.0%) ########################## YGL009C (2340bp = 780AA) has 14 hits (LEU1) isopropylmalate isomerase Spar (test2) orthologous hit at 92% f2338/2338 (100.0%) over 2338bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2326/2337 (99.5%) over 2339bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1807/2336 (77.4%) over 2339bp for offset 2 Sbay (test3) Longest island has f99 at 87% over 1756bp <== THIS IS REAL 0 100 200 300 400 500 600700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k2k |__|___|___|___|___|___|__|___|___|___|___|___|___|__|___|___|___|___|___|__|___|___|___|_| 98f 87% 361bp 99f 87% 1756bp Sb73full |============>........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YGL009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1273 (0.3%). Conflicting: 5/1273 (0.4%). NoInfo: 4/1273 (0.3%). Certain keep: 1260/1273 (99.0%) ########################## YGL008C (2757bp = 919AA) has 50 hits (PMA1) plasma membrane H+-ATPase Spar (test2) orthologous hit at 96% f2757/2757 (100.0%) over 2757bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 95% f2756/2757 (100.0%) over 2757bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f2748/2750 (99.9%) over 2757bp for offset 0 <== THIS IS REAL YGL008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1274 (0.3%). Conflicting: 5/1274 (0.4%). NoInfo: 4/1274 (0.3%). Certain keep: 1261/1274 (99.0%) ########################## YGL006W (3522bp = 1174AA) has 30 hits (PMC1) putative vacuolar Ca2+ ATPase Spar (test2) orthologous hit at 89% f3512/3521 (99.7%) over 3522bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2155/2173 (99.2%) over 2176bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2211/2287 (96.7%) over 2292bp for offset 2 <== THIS IS REAL YGL006W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL006W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1275 (0.3%). Conflicting: 5/1275 (0.4%). NoInfo: 4/1275 (0.3%). Certain keep: 1262/1275 (99.0%) ########################## YGL005C (840bp = 280AA) has 18 hits (COD5) Hypothetical ORF Spar (test2) orthologous hit at 85% f820/835 (98.2%) over 840bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f820/836 (98.1%) over 840bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f753/816 (92.3%) over 826bp for offset 0 <== THIS IS REAL YGL005C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL005C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1276 (0.3%). Conflicting: 5/1276 (0.4%). NoInfo: 4/1276 (0.3%). Certain keep: 1263/1276 (99.0%) ########################## YGL003C (1701bp = 567AA) has 10 hits (CDH1) protein required for Clb2 and Ase1 degradation Spar (test2) orthologous hit at 90% f1701/1701 (100.0%) over 1701bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1701/1701 (100.0%) over 1701bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1701/1701 (100.0%) over 1701bp for offset 0 <== THIS IS REAL YGL003C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL003C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1277 (0.3%). Conflicting: 5/1277 (0.4%). NoInfo: 4/1277 (0.3%). Certain keep: 1264/1277 (99.0%) ########################## YGL002W (651bp = 217AA) has 10 hits (ERP6) p24 protein involved in membrane trafficking Spar (test2) orthologous hit at 90% f651/651 (100.0%) over 651bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f646/650 (99.4%) over 651bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f651/651 (100.0%) over 651bp for offset 0 <== THIS IS REAL YGL002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1278 (0.3%). Conflicting: 5/1278 (0.4%). NoInfo: 4/1278 (0.3%). Certain keep: 1265/1278 (99.0%) ########################## YGL001C (1050bp = 350AA) has 8 hits (ERG26) C-3 sterol dehydrogenase Spar (test2) orthologous hit at 91% f1050/1050 (100.0%) over 1050bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1047/1049 (99.8%) over 1050bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1050/1050 (100.0%) over 1050bp for offset 0 <== THIS IS REAL YGL001C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGL001C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1279 (0.3%). Conflicting: 5/1279 (0.4%). NoInfo: 4/1279 (0.3%). Certain keep: 1266/1279 (99.0%) ########################## YGR005C (1203bp = 401AA) has 48 hits (TFG2) transcription initiation factor TFII..le subunit (96) Spar (test2) orthologous hit at 92% f1203/1203 (100.0%) over 1203bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1203/1203 (100.0%) over 1203bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1203/1203 (100.0%) over 1203bp for offset 0 <== THIS IS REAL YGR005C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR005C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1280 (0.3%). Conflicting: 5/1280 (0.4%). NoInfo: 4/1280 (0.3%). Certain keep: 1267/1280 (99.0%) ########################## YGR006W (660bp = 220AA) has 9 hits (PRP18) RNA splicing factor associated with U5 snRNP Spar (test2) orthologous hit at 87% f598/660 (90.6%) over 660bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 79% f583/658 (88.6%) over 660bp for offset 1 Smik (test3) Longest island has f96 at 79% over 605bp <== THIS IS REAL Sbay (test2) orthologous hit at 75% f584/657 (88.9%) over 660bp for offset 1 Sbay (test3) Longest island has f96 at 75% over 608bp <== THIS IS REAL 0 100 200 300 400 500 600 660 |____________|_____________|____________|_____________|_____________|____________|________| 96f 79% 605bp Sm269full |=================================================================================>.......| 96f 75% 608bp Sb73full |==================================================================================>......| YGR006W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR006W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1281 (0.3%). Conflicting: 5/1281 (0.4%). NoInfo: 4/1281 (0.3%). Certain keep: 1268/1281 (99.0%) ########################## YGR007W (972bp = 324AA) has 5 hits (MUQ1) choline phosphate cytidylyltransferase..ansferase) (174) Spar (test2) orthologous hit at 88% f972/972 (100.0%) over 972bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f971/971 (100.0%) over 971bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f834/970 (86.0%) over 972bp for offset 2 Sbay (test3) Longest island has f98 at 82% over 849bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 972 |________|________|________|_________|________|________|________|_________|________|______| 98f 82% 849bp Sb73full |=============================================================================>...........| YGR007W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR007W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1282 (0.3%). Conflicting: 5/1282 (0.4%). NoInfo: 4/1282 (0.3%). Certain keep: 1269/1282 (99.0%) ########################## YGR008C (255bp = 85AA) has 9 hits (STF2) ATPase stabilizing factor Spar (test2) orthologous hit at 89% f255/255 (100.0%) over 255bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f253/253 (100.0%) over 253bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f255/255 (100.0%) over 255bp for offset 0 <== THIS IS REAL YGR008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1283 (0.3%). Conflicting: 5/1283 (0.4%). NoInfo: 4/1283 (0.3%). Certain keep: 1270/1283 (99.0%) ########################## YGR009C (1956bp = 652AA) has 132 hits (SEC9) Putative t-SNARE of the plasma membrane Spar (test2) orthologous hit at 89% f1947/1955 (99.6%) over 1956bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1929/1949 (99.0%) over 1956bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1737/1929 (90.0%) over 1956bp for offset 0 <== THIS IS REAL YGR009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1284 (0.3%). Conflicting: 5/1284 (0.4%). NoInfo: 4/1284 (0.3%). Certain keep: 1271/1284 (99.0%) ########################## YGR010W (1188bp = 396AA) has 12 hits (NMA2) nicotinic acid mononucleotide adenyl..ransferase (93) Flanking ORFs are: YGR008C and YGR010W. YGR010W skipped ########################## YGR013W (1863bp = 621AA) has 82 hits (SNU71) U1 snRNP protein Spar (test2) orthologous hit at 88% f1859/1862 (99.8%) over 1863bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1834/1857 (98.8%) over 1863bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1516/1556 (97.4%) over 1569bp for offset 0 <== THIS IS REAL YGR013W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR013W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1285 (0.3%). Conflicting: 5/1285 (0.4%). NoInfo: 4/1285 (0.3%). Certain keep: 1272/1285 (99.0%) ########################## YGR014W (3921bp = 1307AA) has 32 hits (MSB2) putative integral membrane protein Spar (test2) orthologous hit at 87% f1644/1661 (99.0%) over 1663bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f1574/1909 (82.5%) over 1956bp for offset 0 Smik (test3) Longest island has f98 at 82% over 1220bp <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1647/1765 (93.3%) over 1796bp for offset 0 <== THIS IS REAL 0 102030040506007080901k 1k1k1k 1k1k1k 1k1k1k2k 2k2k2k 2k2k2k2k 2k2k3k 3k3k3k 3k3k3k3k 3k33k |_|_|_|__|_|_|__|_|_|_|__|_|_|__|_|_|__|_|_|_|__|_|_|__|_|_|_|__|_|_|__|_|_|__|_|_|_|__|_|| 98f 82% 1220bp Sm269full |.................|==========================|> YGR014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1286 (0.3%). Conflicting: 5/1286 (0.4%). NoInfo: 4/1286 (0.3%). Certain keep: 1273/1286 (99.0%) ########################## YGR019W (1416bp = 472AA) has 10 hits (UGA1) gamma-aminobutyrate (GABA) transamin..ansferase) (118) Spar (test2) orthologous hit at 92% f171/171 (100.0%) over 171bp for offset 0 Spar (test3) Longest island has f100 at 93% over 171bp Smik (test2) orthologous hit at 89% f1416/1416 (100.0%) over 1416bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 87% f609/973 (62.6%) over 974bp for offset 1 Sbay (test3) Longest island has f100 at 86% over 609bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k1k |_____|_____|______|_____|_____|______|_____|_____|______|_____|_____|______|_____|_____|_| 100f 93% 17Sp11brk |==========| 100f 86% 609bp Sb71brk |=====================================>.......................> | YGR019W: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YGR019W - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 4/1287 (0.3%). Conflicting: 5/1287 (0.4%). NoInfo: 4/1287 (0.3%). Certain keep: 1274/1287 (99.0%) ########################## YGR020C (357bp = 119AA) has 4 hits (VMA7) vacuolar ATPase V1 domain subunit F (14 kDa) Spar (test2) orthologous hit at 93% f357/357 (100.0%) over 357bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f357/357 (100.0%) over 357bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f275/275 (100.0%) over 275bp for offset 0 <== THIS IS REAL YGR020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1288 (0.3%). Conflicting: 5/1288 (0.4%). NoInfo: 4/1288 (0.3%). Certain keep: 1275/1288 (99.0%) ########################## YGR023W (1656bp = 552AA) has 1480 hits (MTL1) acts in concert with Mid2p to tran..ss signals (110) Flanking ORFs are: YGR019W and YGR021W. YGR023W skipped ########################## YGR027C (327bp = 109AA) has 10 hits (RPS25A) Ribosomal protein S25A (S31A) (rp45) (YS23) Spar (test2) orthologous hit at 96% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 97% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL YGR027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1289 (0.3%). Conflicting: 5/1289 (0.4%). NoInfo: 4/1289 (0.3%). Certain keep: 1276/1289 (99.0%) ########################## YGR028W (1089bp = 363AA) has 44 hits (MSP1) 40 kDa putative membrane-spanning ATPase Spar (test2) non-orthologous hit at 91% f1089/1089 (100.0%) over 1089bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1088/1088 (100.0%) over 1088bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL YGR028W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR028W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1290 (0.3%). Conflicting: 5/1290 (0.4%). NoInfo: 4/1290 (0.3%). Certain keep: 1277/1290 (99.0%) ########################## YGR030C (477bp = 159AA) has 28 hits (POP6) integral subunit of RNase P and appar.. RNase MRP (104) Spar (test2) orthologous hit at 85% f473/476 (99.4%) over 477bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f474/476 (99.6%) over 477bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f457/474 (96.4%) over 477bp for offset 0 <== THIS IS REAL YGR030C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR030C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1291 (0.3%). Conflicting: 5/1291 (0.4%). NoInfo: 4/1291 (0.3%). Certain keep: 1278/1291 (99.0%) ########################## YGR032W (5688bp = 1896AA) has 34 hits (GSC2) catalytic component of 1,3-beta-D-g..n synthase (94) Spar (test2) orthologous hit at 92% f5688/5688 (100.0%) over 5688bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f5663/5685 (99.6%) over 5688bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f5651/5679 (99.5%) over 5688bp for offset 0 <== THIS IS REAL YGR032W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR032W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1292 (0.3%). Conflicting: 5/1292 (0.4%). NoInfo: 4/1292 (0.3%). Certain keep: 1279/1292 (99.0%) ########################## YGR036C (720bp = 240AA) has 5 hits (CAX4) CAX4p contains 3 short stretches of am..osphatase. (205) Spar (test2) orthologous hit at 90% f720/720 (100.0%) over 720bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f713/718 (99.3%) over 720bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f716/719 (99.6%) over 720bp for offset 0 <== THIS IS REAL YGR036C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR036C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1293 (0.3%). Conflicting: 5/1293 (0.4%). NoInfo: 4/1293 (0.3%). Certain keep: 1280/1293 (99.0%) ########################## YGR037C (264bp = 88AA) has 6 hits (ACB1) Acyl-CoA-binding protein (ACBP)/Diazepa..epine (EP) (121) Spar (test2) orthologous hit at 95% f264/264 (100.0%) over 264bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f264/264 (100.0%) over 264bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f263/263 (100.0%) over 263bp for offset 0 <== THIS IS REAL YGR037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1294 (0.3%). Conflicting: 5/1294 (0.4%). NoInfo: 4/1294 (0.3%). Certain keep: 1281/1294 (99.0%) ########################## YGR038W (669bp = 223AA) has 7 hits (ORM1) Product of gene unknown Spar (test2) orthologous hit at 92% f669/669 (100.0%) over 669bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f662/668 (99.1%) over 669bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f669/669 (100.0%) over 669bp for offset 0 <== THIS IS REAL YGR038W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR038W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1295 (0.3%). Conflicting: 5/1295 (0.4%). NoInfo: 4/1295 (0.3%). Certain keep: 1282/1295 (99.0%) ########################## YGR040W (1107bp = 369AA) has 57 hits (KSS1) MAP protein kinase homolog involved ..ansduction (112) Spar (test2) orthologous hit at 91% f1107/1107 (100.0%) over 1107bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1106/1106 (100.0%) over 1106bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1097/1106 (99.2%) over 1107bp for offset 0 <== THIS IS REAL YGR040W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR040W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1296 (0.3%). Conflicting: 5/1296 (0.4%). NoInfo: 4/1296 (0.3%). Certain keep: 1283/1296 (99.0%) ########################## YGR041W (1644bp = 548AA) has 10 hits (BUD9) involved in bud-site selection Spar (test2) orthologous hit at 84% f1622/1638 (99.0%) over 1644bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f1620/1640 (98.8%) over 1644bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f1336/1618 (82.6%) over 1643bp for offset 1 Sbay (test3) Longest island has f91 at 70% over 698bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|____|__| 99f 76% 488bp 87f 64% 205bp 91f 70% 698bp Sb590full |......|oooooooooooooooooooooooooo>.|ooooooooooo>....|oooooooooooooooooooooooooooooooooooo|> YGR041W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR041W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1297 (0.3%). Conflicting: 5/1297 (0.4%). NoInfo: 4/1297 (0.3%). Certain keep: 1284/1297 (99.0%) ########################## YGR044C (903bp = 301AA) has 7 hits (RME1) zinc finger protein; negative regulato.. regulator (131) Spar (test2) orthologous hit at 85% f745/745 (100.0%) over 745bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f733/744 (98.5%) over 748bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f688/733 (93.9%) over 744bp for offset 0 <== THIS IS REAL YGR044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1298 (0.3%). Conflicting: 5/1298 (0.4%). NoInfo: 4/1298 (0.3%). Certain keep: 1285/1298 (99.0%) ########################## YGR047C (3078bp = 1026AA) has 35 hits (TFC4) transcription factor tau (TFIIIC) subunit 131 Spar (test2) orthologous hit at 90% f3044/3058 (99.5%) over 3061bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3057/3072 (99.5%) over 3078bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3056/3069 (99.6%) over 3078bp for offset 0 <== THIS IS REAL YGR047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1299 (0.3%). Conflicting: 5/1299 (0.4%). NoInfo: 4/1299 (0.3%). Certain keep: 1286/1299 (99.0%) ########################## YGR048W (1086bp = 362AA) has 5 hits (UFD1) ubiquitin fusion degradation protein Spar (test2) orthologous hit at 90% f1086/1086 (100.0%) over 1086bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1081/1084 (99.7%) over 1085bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1057/1082 (97.7%) over 1085bp for offset 0 <== THIS IS REAL YGR048W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR048W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1300 (0.3%). Conflicting: 5/1300 (0.4%). NoInfo: 4/1300 (0.3%). Certain keep: 1287/1300 (99.0%) ########################## YGR049W (564bp = 188AA) has 4 hits (SCM4) suppressor of cdc4 mutations Spar (test2) orthologous hit at 91% f564/564 (100.0%) over 564bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f560/561 (99.8%) over 564bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f557/558 (99.8%) over 564bp for offset 0 <== THIS IS REAL YGR049W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR049W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1301 (0.3%). Conflicting: 5/1301 (0.4%). NoInfo: 4/1301 (0.3%). Certain keep: 1288/1301 (99.0%) ########################## YGR055W (1725bp = 575AA) has 4 hits (MUP1) high affinity methionine permease Spar (test2) orthologous hit at 91% f1724/1724 (100.0%) over 1724bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1138/1721 (66.1%) over 1725bp for offset 2 Smik (test3) Longest island has f100 at 87% over 1094bp <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1719/1724 (99.7%) over 1725bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k1k |____|____|____|____|_____|____|____|____|____|_____|____|____|____|_____|____|____|____|_| 100f 85% 452bp 100f 87% 1094bp Sm521full |======================>.........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YGR055W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR055W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1302 (0.3%). Conflicting: 5/1302 (0.4%). NoInfo: 4/1302 (0.3%). Certain keep: 1289/1302 (99.0%) ########################## YGR056W (2787bp = 929AA) has 20 hits (RSC1) Member of RSC complex Spar (test2) orthologous hit at 89% f2782/2786 (99.9%) over 2787bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2759/2783 (99.1%) over 2787bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1622/1630 (99.5%) over 1633bp for offset 0 <== THIS IS REAL YGR056W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR056W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1303 (0.3%). Conflicting: 5/1303 (0.4%). NoInfo: 4/1303 (0.3%). Certain keep: 1290/1303 (99.0%) ########################## YGR057C (738bp = 246AA) has 20 hits (LST7) involved in transport of nitrogen-reg.. permeases (96) Spar (test2) orthologous hit at 92% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f723/735 (98.4%) over 735bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL YGR057C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR057C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1304 (0.3%). Conflicting: 5/1304 (0.4%). NoInfo: 4/1304 (0.3%). Certain keep: 1291/1304 (99.0%) ########################## YGR059W (1539bp = 513AA) has 39 hits (SPR3) septin protein involved in sporulation Spar (test2) orthologous hit at 89% f1535/1536 (99.9%) over 1539bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1535/1535 (100.0%) over 1538bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1490/1528 (97.5%) over 1537bp for offset 0 <== THIS IS REAL YGR059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1305 (0.3%). Conflicting: 5/1305 (0.4%). NoInfo: 4/1305 (0.3%). Certain keep: 1292/1305 (99.0%) ########################## YGR060W (930bp = 310AA) has 5 hits (ERG25) C-4 sterol methyl oxidase Spar (test2) orthologous hit at 96% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 93% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL YGR060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1306 (0.3%). Conflicting: 5/1306 (0.4%). NoInfo: 4/1306 (0.3%). Certain keep: 1293/1306 (99.0%) ########################## YGR061C (4077bp = 1359AA) has 8 hits (ADE6) 5'-phosphoribosylformyl glycinamidin..synthetase (92) Spar (test2) orthologous hit at 91% f4077/4077 (100.0%) over 4077bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2814/2818 (99.9%) over 2819bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f4066/4075 (99.8%) over 4077bp for offset 0 <== THIS IS REAL YGR061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1307 (0.3%). Conflicting: 5/1307 (0.4%). NoInfo: 4/1307 (0.3%). Certain keep: 1294/1307 (99.0%) ########################## YGR062C (951bp = 317AA) has 4 hits (COX18) required for mitochondrial cytochrome..e activity (97) Spar (test2) orthologous hit at 87% f951/951 (100.0%) over 951bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f944/949 (99.5%) over 951bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f951/951 (100.0%) over 951bp for offset 0 <== THIS IS REAL YGR062C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR062C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1308 (0.3%). Conflicting: 5/1308 (0.4%). NoInfo: 4/1308 (0.3%). Certain keep: 1295/1308 (99.0%) ########################## YGR063C (309bp = 103AA) has 6 hits (SPT4) Zn-finger protein, transcriptional regulator Flanking ORFs are: YGR061C and YGR063C. YGR063C skipped ########################## YGR065C (1782bp = 594AA) has 18 hits (VHT1) H+-biotin symporter Spar (test2) orthologous hit at 91% f1771/1776 (99.7%) over 1777bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1770/1776 (99.7%) over 1777bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f1767/1780 (99.3%) over 1782bp for offset 0 <== THIS IS REAL YGR065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1309 (0.3%). Conflicting: 5/1309 (0.4%). NoInfo: 4/1309 (0.3%). Certain keep: 1296/1309 (99.0%) ########################## YGR070W (3468bp = 1156AA) has 32 hits (ROM1) Rho1 GDP/GTP exchange protein Spar (test2) orthologous hit at 88% f3454/3465 (99.7%) over 3468bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f3328/3407 (97.7%) over 3430bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f3147/3295 (95.5%) over 3324bp for offset 0 <== THIS IS REAL YGR070W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR070W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1310 (0.3%). Conflicting: 5/1310 (0.4%). NoInfo: 4/1310 (0.3%). Certain keep: 1297/1310 (99.0%) ########################## YGR072W (1164bp = 388AA) has 149 hits (UPF3) involved in decay of mRNA containin..nse codons (97) Spar (test2) orthologous hit at 87% f1155/1158 (99.7%) over 1164bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1146/1158 (99.0%) over 1164bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1129/1162 (97.2%) over 1163bp for offset 0 <== THIS IS REAL YGR072W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR072W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1311 (0.3%). Conflicting: 5/1311 (0.4%). NoInfo: 4/1311 (0.3%). Certain keep: 1298/1311 (99.0%) ########################## YGR074W (441bp = 147AA) has 5 hits (SMD1) U6 snRNP protein . YGR074W skipped ########################## YGR075C (729bp = 243AA) has 19 hits (PRP38) RNA splicing factor . YGR075C skipped ########################## YGR076C (474bp = 158AA) has 12 hits (MRPL25) Mitochondrial ribosomal protein MRP..25 (YmL25) (91) Spar (test2) orthologous hit at 90% f474/474 (100.0%) over 474bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f474/474 (100.0%) over 474bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f271/271 (100.0%) over 271bp for offset 0 <== THIS IS REAL YGR076C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR076C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1312 (0.3%). Conflicting: 5/1312 (0.4%). NoInfo: 4/1312 (0.3%). Certain keep: 1299/1312 (99.0%) ########################## YGR077C (1770bp = 590AA) has 4 hits (PEX8) peroxisome associated protein contain..TS1 signal (97) Spar (test2) orthologous hit at 85% f1763/1768 (99.7%) over 1770bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1714/1765 (97.1%) over 1770bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1713/1764 (97.1%) over 1769bp for offset 0 <== THIS IS REAL YGR077C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR077C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1313 (0.3%). Conflicting: 5/1313 (0.4%). NoInfo: 4/1313 (0.3%). Certain keep: 1300/1313 (99.0%) ########################## YGR078C (600bp = 200AA) has 5 hits (PAC10) Polypeptide 3 of a Yeast Non-native A..BC complex (151) Spar (test2) orthologous hit at 89% f600/600 (100.0%) over 600bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f600/600 (100.0%) over 600bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f599/600 (99.8%) over 600bp for offset 0 <== THIS IS REAL YGR078C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR078C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1314 (0.3%). Conflicting: 5/1314 (0.4%). NoInfo: 4/1314 (0.3%). Certain keep: 1301/1314 (99.0%) ########################## YGR080W (999bp = 333AA) has 6 hits (TWF1) Twinfilin A, an actin monomer sequeste..ng protein (92) Spar (test2) orthologous hit at 89% f996/998 (99.8%) over 999bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f987/994 (99.3%) over 999bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f502/522 (96.2%) over 525bp for offset 0 <== THIS IS REAL YGR080W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR080W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1315 (0.3%). Conflicting: 5/1315 (0.4%). NoInfo: 4/1315 (0.3%). Certain keep: 1302/1315 (99.0%) ########################## YGR082W (552bp = 184AA) has 7 hits (TOM20) 20 kDa mitochondrial outer membrane p..t receptor (102) Spar (test2) orthologous hit at 93% f552/552 (100.0%) over 552bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f552/552 (100.0%) over 552bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f552/552 (100.0%) over 552bp for offset 0 <== THIS IS REAL YGR082W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR082W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1316 (0.3%). Conflicting: 5/1316 (0.4%). NoInfo: 4/1316 (0.3%). Certain keep: 1303/1316 (99.0%) ########################## YGR083C (1956bp = 652AA) has 179 hits (GCD2) translation initiation factor eIF2B..N4 protein (145) Spar (test2) orthologous hit at 90% f1956/1956 (100.0%) over 1956bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1956/1956 (100.0%) over 1956bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1952/1952 (100.0%) over 1955bp for offset 0 <== THIS IS REAL YGR083C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR083C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1317 (0.3%). Conflicting: 5/1317 (0.4%). NoInfo: 4/1317 (0.3%). Certain keep: 1304/1317 (99.0%) ########################## YGR084C (1020bp = 340AA) has 6 hits (MRP13) 35 kDa mitochondrial ribosomal small..it protein (96) Spar (test2) orthologous hit at 88% f958/1016 (94.3%) over 1017bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 79% f960/991 (96.9%) over 994bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f717/828 (86.6%) over 836bp for offset 2 Sbay (test3) Longest island has f99 at 80% over 700bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k1k |_______|________|________|________|________|_______|________|________|________|________|_| 99f 80% 700bp Sb354brk |....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.....> | YGR084C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR084C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1318 (0.3%). Conflicting: 5/1318 (0.4%). NoInfo: 4/1318 (0.3%). Certain keep: 1305/1318 (99.0%) ########################## YGR085C (525bp = 175AA) has 9 hits (RPL11B) 60S ribosomal protein L11B (L16B) (r..9B) (YL22) (92) Spar (test2) orthologous hit at 93% f525/525 (100.0%) over 525bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f525/525 (100.0%) over 525bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 92% f525/525 (100.0%) over 525bp for offset 0 <== THIS IS REAL YGR085C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR085C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1319 (0.3%). Conflicting: 5/1319 (0.4%). NoInfo: 4/1319 (0.3%). Certain keep: 1306/1319 (99.0%) ########################## YGR087C (1692bp = 564AA) has 16 hits (PDC6) Third, minor isozyme of pyruvate decarboxylase Spar (test2) orthologous hit at 89% f1692/1692 (100.0%) over 1692bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 67% f117/243 (48.1%) over 246bp for offset 1 Smik (test3) Longest island has f97 at 69% over 108bp Sbay (test2) orthologous hit at 81% f1675/1689 (99.2%) over 1692bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|_____|____|____|_____|____|____|_____|____|____|_____|____|____|_____|____| 10197f 69%92f 77%Sm524full |=||ooooo>|xxx> | YGR087C: kill: Smik - keep: Spar Sbay YGR087C - Conflicting. Kill (Smik) and Keep (Spar Sbay) Current total: Certain kills: 4/1320 (0.3%). Conflicting: 6/1320 (0.5%). NoInfo: 4/1320 (0.3%). Certain keep: 1306/1320 (98.9%) ########################## YGR088W (1722bp = 574AA) has 10 hits (CTT1) cytoplasmic catalase T Spar (test2) orthologous hit at 91% f1718/1718 (100.0%) over 1718bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1702/1716 (99.2%) over 1719bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1443/1456 (99.1%) over 1459bp for offset 0 <== THIS IS REAL YGR088W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR088W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1321 (0.3%). Conflicting: 6/1321 (0.5%). NoInfo: 4/1321 (0.3%). Certain keep: 1307/1321 (98.9%) ########################## YGR091W (1485bp = 495AA) has 14 hits (PRP31) pre-mRNA splicing protein Spar (test2) orthologous hit at 86% f1485/1485 (100.0%) over 1485bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f843/858 (98.3%) over 861bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1421/1475 (96.3%) over 1485bp for offset 0 <== THIS IS REAL YGR091W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR091W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1322 (0.3%). Conflicting: 6/1322 (0.5%). NoInfo: 4/1322 (0.3%). Certain keep: 1308/1322 (98.9%) ########################## YGR092W (1719bp = 573AA) has 85 hits (DBF2) Serine/threonine protein kinase Spar (test2) orthologous hit at 91% f1719/1719 (100.0%) over 1719bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1713/1717 (99.8%) over 1718bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1462/1716 (85.2%) over 1717bp for offset 0 Sbay (test3) Longest island has f100 at 86% over 1466bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 11k |____|____|____|____|_____|____|____|____|_____|____|____|____|_____|____|____|____|_____|| 98f 80% 255bp100f 86% 1466bp Sb352full |============|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YGR092W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR092W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1323 (0.3%). Conflicting: 6/1323 (0.5%). NoInfo: 4/1323 (0.3%). Certain keep: 1309/1323 (98.9%) ########################## YGR094W (3315bp = 1105AA) has 7 hits (VAS1) mitochondrial and cytoplasmic valyl-..synthetase (95) Spar (test2) orthologous hit at 92% f3315/3315 (100.0%) over 3315bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f3315/3315 (100.0%) over 3315bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f3315/3315 (100.0%) over 3315bp for offset 0 <== THIS IS REAL YGR094W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR094W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1324 (0.3%). Conflicting: 6/1324 (0.5%). NoInfo: 4/1324 (0.3%). Certain keep: 1310/1324 (98.9%) ########################## YGR095C (771bp = 257AA) has 6 hits (RRP46) Putative 3'->5' exoribonuclease; comp..onucleases (127) Spar (test2) orthologous hit at 88% f668/763 (87.5%) over 771bp for offset 2 Spar (test3) Longest island has f99 at 91% over 672bp <== THIS IS REAL Smik (test2) orthologous hit at 85% f670/675 (99.3%) over 676bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f705/755 (93.4%) over 761bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 771 |__________|___________|___________|__________|___________|___________|__________|________| 99f 91% 672bp Sp6full |..........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YGR095C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR095C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1325 (0.3%). Conflicting: 6/1325 (0.5%). NoInfo: 4/1325 (0.3%). Certain keep: 1311/1325 (98.9%) ########################## YGR097W (3441bp = 1147AA) has 31 hits (ASK10) transcriptional activator of the S..ory system (126) Spar (test2) orthologous hit at 89% f1832/1832 (100.0%) over 1835bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3425/3434 (99.7%) over 3441bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1757/1772 (99.2%) over 1778bp for offset 0 <== THIS IS REAL YGR097W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR097W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1326 (0.3%). Conflicting: 6/1326 (0.5%). NoInfo: 4/1326 (0.3%). Certain keep: 1312/1326 (98.9%) ########################## YGR098C (4893bp = 1631AA) has 31 hits (ESP1) involved in regulation of spindle p..uplication (100) Spar (test2) non-orthologous hit at 88% f4835/4857 (99.5%) over 4862bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f4849/4884 (99.3%) over 4893bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f4821/4874 (98.9%) over 4886bp for offset 0 <== THIS IS REAL YGR098C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR098C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1327 (0.3%). Conflicting: 6/1327 (0.5%). NoInfo: 4/1327 (0.3%). Certain keep: 1313/1327 (98.9%) ########################## YGR099W (2067bp = 689AA) has 13 hits (TEL2) telomere binding protein Spar (test2) orthologous hit at 86% f2055/2055 (100.0%) over 2055bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f841/878 (95.8%) over 888bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1554/1576 (98.6%) over 1582bp for offset 0 <== THIS IS REAL YGR099W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR099W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1328 (0.3%). Conflicting: 6/1328 (0.5%). NoInfo: 4/1328 (0.3%). Certain keep: 1314/1328 (98.9%) ########################## YGR100W (2853bp = 951AA) has 18 hits (MDR1) interacts with Mac1, a transcription..tilization (148) Spar (test2) orthologous hit at 90% f2853/2853 (100.0%) over 2853bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2848/2852 (99.9%) over 2853bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2837/2846 (99.7%) over 2853bp for offset 0 <== THIS IS REAL YGR100W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR100W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1329 (0.3%). Conflicting: 6/1329 (0.5%). NoInfo: 4/1329 (0.3%). Certain keep: 1315/1329 (98.9%) ########################## YGR101W (1041bp = 347AA) has 3 hits (PCP1) Spar (test2) orthologous hit at 89% f1041/1041 (100.0%) over 1041bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f652/1040 (62.7%) over 1041bp for offset 1 Smik (test3) Longest island has f100 at 87% over 649bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1016/1035 (98.2%) over 1040bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|________|_______|________|________|_______|________|________|_______|________|___| 99f 75% 393bp 100f 87% 649bp Sm527full |=================================|ooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YGR101W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR101W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1330 (0.3%). Conflicting: 6/1330 (0.5%). NoInfo: 4/1330 (0.3%). Certain keep: 1316/1330 (98.9%) ########################## YGR103W (1818bp = 606AA) has 760 hits (NOP7) Hypothetical ORF Spar (test2) orthologous hit at 91% f1807/1812 (99.7%) over 1818bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1647/1691 (97.4%) over 1706bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1036/1132 (91.5%) over 1152bp for offset 0 <== THIS IS REAL YGR103W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR103W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1331 (0.3%). Conflicting: 6/1331 (0.5%). NoInfo: 4/1331 (0.3%). Certain keep: 1317/1331 (98.9%) ########################## YGR104C (924bp = 308AA) has 8 hits (SRB5) subunit of RNA polymerase II holoenzym..or complex (98) Spar (test2) orthologous hit at 87% f924/924 (100.0%) over 924bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f916/923 (99.2%) over 924bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f909/921 (98.7%) over 924bp for offset 0 <== THIS IS REAL YGR104C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR104C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1332 (0.3%). Conflicting: 6/1332 (0.5%). NoInfo: 4/1332 (0.3%). Certain keep: 1318/1332 (98.9%) ########################## YGR105W (234bp = 78AA) has 12 hits (VMA21) vacuolar H+-ATPase assembly protein Spar (test2) orthologous hit at 90% f230/230 (100.0%) over 230bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f234/234 (100.0%) over 234bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f234/234 (100.0%) over 234bp for offset 0 <== THIS IS REAL YGR105W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR105W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1333 (0.3%). Conflicting: 6/1333 (0.5%). NoInfo: 4/1333 (0.3%). Certain keep: 1319/1333 (98.9%) ########################## YGR108W (1416bp = 472AA) has 28 hits (CLB1) G(sub)2-specific B-type cyclin Spar (test2) orthologous hit at 89% f1411/1416 (99.6%) over 1416bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1080/1087 (99.4%) over 1088bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f723/1193 (60.6%) over 1207bp for offset 0 Sbay (test3) Longest island has f100 at 85% over 693bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k1k |_____|_____|______|_____|_____|______|_____|_____|______|_____|_____|______|_____|_____|_| 89f 72% 515bp 100f 85% 693bp Sb351full |oooooooooooooooooooooooooooooooo|===========================================| YGR108W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR108W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1334 (0.3%). Conflicting: 6/1334 (0.4%). NoInfo: 4/1334 (0.3%). Certain keep: 1320/1334 (99.0%) ########################## YGR109C (1143bp = 381AA) has 25 hits (CLB6) B-type cyclin Spar (test2) orthologous hit at 89% f1120/1141 (98.2%) over 1143bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1119/1133 (98.8%) over 1137bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f1117/1139 (98.1%) over 1143bp for offset 0 <== THIS IS REAL YGR109C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR109C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1335 (0.3%). Conflicting: 6/1335 (0.4%). NoInfo: 4/1335 (0.3%). Certain keep: 1321/1335 (99.0%) ########################## YGR112W (1170bp = 390AA) has 4 hits (SHY1) mitochondrial protein with homology t..URF-1 gene (107) Spar (test2) orthologous hit at 88% f1165/1169 (99.7%) over 1170bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1154/1168 (98.8%) over 1170bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1105/1159 (95.3%) over 1170bp for offset 0 <== THIS IS REAL YGR112W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR112W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1336 (0.3%). Conflicting: 6/1336 (0.4%). NoInfo: 4/1336 (0.3%). Certain keep: 1322/1336 (99.0%) ########################## YGR113W (1032bp = 344AA) has 8 hits (DAM1) spindle pole body protein Spar (test2) orthologous hit at 88% f936/946 (98.9%) over 948bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1032/1032 (100.0%) over 1032bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1012/1030 (98.3%) over 1032bp for offset 0 <== THIS IS REAL YGR113W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR113W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1337 (0.3%). Conflicting: 6/1337 (0.4%). NoInfo: 4/1337 (0.3%). Certain keep: 1323/1337 (99.0%) ########################## YGR116W (4356bp = 1452AA) has 357 hits (SPT6) transcriptional regulator, interac..y activity (158) . YGR116W skipped ########################## YGR119C (1626bp = 542AA) has 69 hits (NUP57) Contains GLFG repeats in N-terminal..minal half (123) Spar (test2) orthologous hit at 91% f854/855 (99.9%) over 855bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f855/856 (99.9%) over 856bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f900/1148 (78.4%) over 1173bp for offset 0 Sbay (test3) Longest island has f95 at 75% over 896bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k1k |____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|_____|____|_| 95f 75% 896bp Sb351full |================================================>..............> | YGR119C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR119C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1338 (0.3%). Conflicting: 6/1338 (0.4%). NoInfo: 4/1338 (0.3%). Certain keep: 1324/1338 (99.0%) ########################## YGR120C (828bp = 276AA) has 19 hits (SEC35) peripheral membrane protein involved.. secretion (93) Spar (test2) orthologous hit at 89% f821/827 (99.3%) over 828bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f793/803 (98.8%) over 804bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f781/815 (95.8%) over 818bp for offset 2 <== THIS IS REAL YGR120C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR120C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1339 (0.3%). Conflicting: 6/1339 (0.4%). NoInfo: 4/1339 (0.3%). Certain keep: 1325/1339 (99.0%) ########################## YGR121C (1479bp = 493AA) has 12 hits (MEP1) ammonia permease Spar (test2) orthologous hit at 90% f1479/1479 (100.0%) over 1479bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f689/689 (100.0%) over 689bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1468/1474 (99.6%) over 1478bp for offset 0 <== THIS IS REAL YGR121C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR121C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1340 (0.3%). Conflicting: 6/1340 (0.4%). NoInfo: 4/1340 (0.3%). Certain keep: 1326/1340 (99.0%) ########################## YGR123C (1542bp = 514AA) has 26 hits (PPT1) serine/threonine phosphatase Spar (test2) orthologous hit at 91% f1541/1541 (100.0%) over 1541bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1254/1257 (99.8%) over 1258bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1528/1539 (99.3%) over 1541bp for offset 0 <== THIS IS REAL YGR123C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR123C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1341 (0.3%). Conflicting: 6/1341 (0.4%). NoInfo: 4/1341 (0.3%). Certain keep: 1327/1341 (99.0%) ########################## YGR124W (1719bp = 573AA) has 10 hits (ASN2) asparagine synthetase Spar (test2) orthologous hit at 93% f1719/1719 (100.0%) over 1719bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1719/1719 (100.0%) over 1719bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1711/1718 (99.6%) over 1719bp for offset 0 <== THIS IS REAL YGR124W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR124W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1342 (0.3%). Conflicting: 6/1342 (0.4%). NoInfo: 4/1342 (0.3%). Certain keep: 1328/1342 (99.0%) ########################## YGR128C (2142bp = 714AA) has 25 hits (UTP8) Protein required for cell viability Spar (test2) orthologous hit at 88% f2142/2142 (100.0%) over 2142bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1865/1880 (99.2%) over 1883bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2025/2052 (98.7%) over 2060bp for offset 0 <== THIS IS REAL YGR128C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR128C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1343 (0.3%). Conflicting: 6/1343 (0.4%). NoInfo: 4/1343 (0.3%). Certain keep: 1329/1343 (99.0%) ########################## YGR129W (648bp = 216AA) has 18 hits (SYF2) (putative) involved in pre-mRNA splicing Spar (test2) orthologous hit at 87% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f634/641 (98.9%) over 648bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f512/609 (84.1%) over 623bp for offset 0 Sbay (test3) Longest island has f94 at 73% over 505bp <== THIS IS REAL 0 100 200 300 400 500 600 648 |____________|_____________|_____________|_____________|_____________|_____________|______| 94f 73% 505bp Sb349full |.................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YGR129W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR129W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1344 (0.3%). Conflicting: 6/1344 (0.4%). NoInfo: 4/1344 (0.3%). Certain keep: 1330/1344 (99.0%) ########################## YGR132C (864bp = 288AA) has 12 hits (PHB1) mitochondrial protein, prohibitin hom..siae Phb2p (116) Spar (test2) orthologous hit at 90% f864/864 (100.0%) over 864bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f859/863 (99.5%) over 864bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f860/863 (99.7%) over 864bp for offset 0 <== THIS IS REAL YGR132C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR132C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1345 (0.3%). Conflicting: 6/1345 (0.4%). NoInfo: 4/1345 (0.3%). Certain keep: 1331/1345 (99.0%) ########################## YGR133W (552bp = 184AA) has 10 hits (PEX4) Member of ubiquitin-conjugating protein family Spar (test2) orthologous hit at 85% f552/552 (100.0%) over 552bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f214/438 (48.9%) over 442bp for offset 1 Smik (test3) Longest island has f95 at 80% over 226bp Sbay (test2) orthologous hit at 76% f509/550 (92.5%) over 552bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 552 |_______________|_______________|_______________|________________|_______________|________| 95f 80% 226bp Sm538brk |...|ooooooooooooooooooooooooooooooooooo>...............................> | YGR133W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YGR133W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 4/1346 (0.3%). Conflicting: 6/1346 (0.4%). NoInfo: 4/1346 (0.3%). Certain keep: 1332/1346 (99.0%) ########################## YGR134W (3369bp = 1123AA) has 19 hits (CAF130) CCR4 Associated Factor 130 kDa Spar (test2) orthologous hit at 87% f2631/2735 (96.2%) over 2749bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f3301/3355 (98.4%) over 3369bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f896/1360 (65.9%) over 1374bp for offset 1 Sbay (test3) Longest island has f100 at 79% over 848bp <== THIS IS REAL 0 1002003040050060700800901k 1k 1k1k 1k 1k1k 1k 1k1k 2k 2k2k 2k 2k2k 2k 2k2k 2k 3k3k 3k 3k3k |_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_| 100f 79% 848bp 98f 81% 370bp Sb349full ||======================|ooooooooo>..> | YGR134W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR134W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1347 (0.3%). Conflicting: 6/1347 (0.4%). NoInfo: 4/1347 (0.3%). Certain keep: 1333/1347 (99.0%) ########################## YGR135W (777bp = 259AA) has 11 hits (PRE9) proteasome component Y13 Spar (test2) orthologous hit at 90% f777/777 (100.0%) over 777bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f777/777 (100.0%) over 777bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f777/777 (100.0%) over 777bp for offset 0 <== THIS IS REAL YGR135W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR135W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1348 (0.3%). Conflicting: 6/1348 (0.4%). NoInfo: 4/1348 (0.3%). Certain keep: 1334/1348 (99.0%) ########################## YGR136W (726bp = 242AA) has 31 hits (LSB1) Flanking ORFs are: YGR134W and YGR136W. YGR136W skipped ########################## YGR138C (1845bp = 615AA) has 27 hits (TPO2) Spar (test2) orthologous hit at 91% f869/869 (100.0%) over 869bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1830/1842 (99.3%) over 1845bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1032/1032 (100.0%) over 1032bp for offset 0 <== THIS IS REAL YGR138C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR138C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1349 (0.3%). Conflicting: 6/1349 (0.4%). NoInfo: 4/1349 (0.3%). Certain keep: 1335/1349 (99.0%) ########################## YGR140W (2871bp = 957AA) has 19 hits (CBF2) 110 kDa subunit of the centromere bi..actor CBF3 (97) Spar (test2) non-orthologous hit at 86% f1383/1405 (98.4%) over 1406bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1891/1933 (97.8%) over 1940bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f932/1017 (91.6%) over 1032bp for offset 2 <== THIS IS REAL YGR140W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR140W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1350 (0.3%). Conflicting: 6/1350 (0.4%). NoInfo: 4/1350 (0.3%). Certain keep: 1336/1350 (99.0%) ########################## YGR141W (1404bp = 468AA) has 13 hits (VPS62) Spar (test2) orthologous hit at 92% f955/955 (100.0%) over 955bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1215/1244 (97.7%) over 1246bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1364/1372 (99.4%) over 1374bp for offset 0 <== THIS IS REAL YGR141W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR141W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1351 (0.3%). Conflicting: 6/1351 (0.4%). NoInfo: 4/1351 (0.3%). Certain keep: 1337/1351 (99.0%) ########################## YGR142W (1233bp = 411AA) has 107 hits (BTN2) Gene/protein whose expression is el..st strain. (130) Spar (test2) orthologous hit at 83% f1010/1023 (98.7%) over 1026bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f157/191 (82.2%) over 195bp for offset 0 Smik (test3) Longest island has f91 at 80% over 151bp Sbay (test2) orthologous hit at 73% f1146/1215 (94.3%) over 1233bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|_______|______|______|_______|______|______|______|_______|______|__| 91f 80% 15111100f 77% 13bp Sm539brk |==========|||> | YGR142W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YGR142W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 4/1352 (0.3%). Conflicting: 6/1352 (0.4%). NoInfo: 4/1352 (0.3%). Certain keep: 1338/1352 (99.0%) ########################## YGR143W (2316bp = 772AA) has 38 hits (SKN1) encodes a predicted type II membrane..s to Kre6p (115) Spar (test2) orthologous hit at 90% f2313/2315 (99.9%) over 2316bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2297/2313 (99.3%) over 2316bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f423/436 (97.0%) over 442bp for offset 0 <== THIS IS REAL YGR143W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR143W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1353 (0.3%). Conflicting: 6/1353 (0.4%). NoInfo: 4/1353 (0.3%). Certain keep: 1339/1353 (99.0%) ########################## YGR144W (981bp = 327AA) has 6 hits (THI4) component of the biosynthetic pathway ..f thiamine (124) Spar (test2) orthologous hit at 92% f310/310 (100.0%) over 310bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f981/981 (100.0%) over 981bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f971/975 (99.6%) over 975bp for offset 0 <== THIS IS REAL YGR144W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR144W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1354 (0.3%). Conflicting: 6/1354 (0.4%). NoInfo: 4/1354 (0.3%). Certain keep: 1340/1354 (99.0%) ########################## YGR147C (867bp = 289AA) has 6 hits (NAT2) N alpha-acetyltransferase that acts on..ne termini (99) Spar (test2) orthologous hit at 87% f867/867 (100.0%) over 867bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f863/866 (99.7%) over 867bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f834/862 (96.8%) over 867bp for offset 0 <== THIS IS REAL YGR147C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR147C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1355 (0.3%). Conflicting: 6/1355 (0.4%). NoInfo: 4/1355 (0.3%). Certain keep: 1341/1355 (99.0%) ########################## YGR148C (468bp = 156AA) has 35 hits (RPL24B) Ribosomal protein L24B (rp29) (YL21) (L30B) Spar (test2) orthologous hit at 96% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 95% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL YGR148C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR148C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1356 (0.3%). Conflicting: 6/1356 (0.4%). NoInfo: 4/1356 (0.3%). Certain keep: 1342/1356 (99.0%) ########################## YGR152C (819bp = 273AA) has 12 hits (RSR1) GTP-binding protein, ras superfamily Flanking ORFs are: YGR147C and YGR149W. YGR152C skipped ########################## YGR153W (654bp = 218AA) has 6 hits (TOS10) Hypothetical ORF Spar (test2) orthologous hit at 81% f645/652 (98.9%) over 654bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 69% f589/641 (91.9%) over 654bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f342/378 (90.5%) over 388bp for offset 0 <== THIS IS REAL YGR153W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR153W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1357 (0.3%). Conflicting: 6/1357 (0.4%). NoInfo: 4/1357 (0.3%). Certain keep: 1343/1357 (99.0%) ########################## YGR155W (1524bp = 508AA) has 11 hits (CYS4) Cystathionine beta-synthase Spar (test2) orthologous hit at 90% f1524/1524 (100.0%) over 1524bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1520/1523 (99.8%) over 1524bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1239/1259 (98.4%) over 1261bp for offset 2 <== THIS IS REAL YGR155W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR155W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1358 (0.3%). Conflicting: 6/1358 (0.4%). NoInfo: 4/1358 (0.3%). Certain keep: 1344/1358 (99.0%) ########################## YGR156W (1278bp = 426AA) has 7 hits (PTI1) Spar (test2) orthologous hit at 93% f1278/1278 (100.0%) over 1278bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1267/1273 (99.5%) over 1278bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 75% f640/786 (81.4%) over 794bp for offset 0 Sbay (test3) Longest island has f99 at 77% over 625bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|______|______|______|______|______|______|______|______|______|_____| 99f 77% 625bp Sb360full |...........|===========================================> | YGR156W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR156W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1359 (0.3%). Conflicting: 6/1359 (0.4%). NoInfo: 4/1359 (0.3%). Certain keep: 1345/1359 (99.0%) ########################## YGR157W (2610bp = 870AA) has 19 hits (CHO2) Phosphatidyl-ethanolamine N-methyltransferase Spar (test2) orthologous hit at 90% f2610/2610 (100.0%) over 2610bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2605/2609 (99.8%) over 2610bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f894/898 (99.6%) over 899bp for offset 0 <== THIS IS REAL YGR157W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR157W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1360 (0.3%). Conflicting: 6/1360 (0.4%). NoInfo: 4/1360 (0.3%). Certain keep: 1346/1360 (99.0%) ########################## YGR158C (753bp = 251AA) has 6 hits (MTR3) nucleolar protein involved in mRNA transport Spar (test2) orthologous hit at 89% f744/753 (98.8%) over 753bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 83% f741/748 (99.1%) over 750bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f732/751 (97.5%) over 753bp for offset 0 <== THIS IS REAL YGR158C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR158C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1361 (0.3%). Conflicting: 6/1361 (0.4%). NoInfo: 4/1361 (0.3%). Certain keep: 1347/1361 (99.0%) ########################## YGR159C (1245bp = 415AA) has 559 hits (NSR1) nuclear localization sequence binding protein Flanking ORFs are: YGR157W and YGR159C. YGR159C skipped ########################## YGR160W (612bp = 204AA) has 749 hits (FYV13) Hypothetical ORF Flanking ORFs are: YGR157W and YGR159C. YGR160W skipped ########################## YGR162W (2859bp = 953AA) has 59 hits (TIF4631) mRNA cap-binding protein (eIF-4F)..alian p220 (154) Spar (test2) orthologous hit at 91% f2329/2329 (100.0%) over 2335bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2191/2316 (94.6%) over 2345bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2639/2817 (93.7%) over 2856bp for offset 0 <== THIS IS REAL YGR162W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR162W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1362 (0.3%). Conflicting: 6/1362 (0.4%). NoInfo: 4/1362 (0.3%). Certain keep: 1348/1362 (99.0%) ########################## YGR163W (1026bp = 342AA) has 4 hits (GTR2) (putative) small GTPase, similar to Gtr1 Spar (test2) orthologous hit at 90% f1026/1026 (100.0%) over 1026bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1026/1026 (100.0%) over 1026bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1026/1026 (100.0%) over 1026bp for offset 0 <== THIS IS REAL YGR163W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR163W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1363 (0.3%). Conflicting: 6/1363 (0.4%). NoInfo: 4/1363 (0.3%). Certain keep: 1349/1363 (99.0%) ########################## YGR166W (1683bp = 561AA) has 14 hits (KRE11) involved in cell wall biogenesis Spar (test2) orthologous hit at 87% f1676/1679 (99.8%) over 1683bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1228/1388 (88.5%) over 1405bp for offset 2 Smik (test3) Longest island has f99 at 83% over 1181bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1079/1106 (97.6%) over 1110bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|_____|____|____|_____|____|____|_____|____|____|_____|____|____|_____|____|____| 99f 83% 1181bp Sm543full |............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YGR166W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR166W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1364 (0.3%). Conflicting: 6/1364 (0.4%). NoInfo: 4/1364 (0.3%). Certain keep: 1350/1364 (99.0%) ########################## YGR167W (702bp = 234AA) has 12 hits (CLC1) Clathrin light chain Spar (test2) orthologous hit at 89% f687/696 (98.7%) over 702bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f696/698 (99.7%) over 702bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f687/696 (98.7%) over 702bp for offset 0 <== THIS IS REAL YGR167W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR167W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1365 (0.3%). Conflicting: 6/1365 (0.4%). NoInfo: 4/1365 (0.3%). Certain keep: 1351/1365 (99.0%) ########################## YGR169C (1215bp = 405AA) has 13 hits (PUS6) Spar (test2) orthologous hit at 90% f1215/1215 (100.0%) over 1215bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1215/1215 (100.0%) over 1215bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f777/807 (96.3%) over 814bp for offset 0 <== THIS IS REAL YGR169C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR169C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1366 (0.3%). Conflicting: 6/1366 (0.4%). NoInfo: 4/1366 (0.3%). Certain keep: 1352/1366 (99.0%) ########################## YGR170W (3417bp = 1139AA) has 24 hits (PSD2) phosphatidylserine decarboxylase lo..e or Golgi (105) Spar (test2) orthologous hit at 90% f3417/3417 (100.0%) over 3417bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2498/2498 (100.0%) over 2498bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2487/2495 (99.7%) over 2498bp for offset 0 <== THIS IS REAL YGR170W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR170W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1367 (0.3%). Conflicting: 6/1367 (0.4%). NoInfo: 4/1367 (0.3%). Certain keep: 1353/1367 (99.0%) ########################## YGR171C (1728bp = 576AA) has 11 hits (MSM1) mitochondrial methionyl-tRNA synthetase Spar (test2) orthologous hit at 88% f1720/1727 (99.6%) over 1728bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1678/1720 (97.6%) over 1726bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1478/1544 (95.7%) over 1556bp for offset 0 <== THIS IS REAL YGR171C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR171C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1368 (0.3%). Conflicting: 6/1368 (0.4%). NoInfo: 4/1368 (0.3%). Certain keep: 1354/1368 (99.0%) ########################## YGR172C (747bp = 249AA) has 7 hits (YIP1) Golgi integral membrane protein, inter..t proteins (102) Spar (test2) orthologous hit at 92% f747/747 (100.0%) over 747bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f747/747 (100.0%) over 747bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f747/747 (100.0%) over 747bp for offset 0 <== THIS IS REAL YGR172C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR172C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1369 (0.3%). Conflicting: 6/1369 (0.4%). NoInfo: 4/1369 (0.3%). Certain keep: 1355/1369 (99.0%) ########################## YGR174C (513bp = 171AA) has 4 hits (CBP4) ubiquinol--cytochrome-c reductase asse..bly factor (91) Spar (test2) orthologous hit at 89% f505/512 (98.6%) over 513bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f453/508 (89.2%) over 509bp for offset 0 Smik (test3) Longest island has f100 at 86% over 449bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f495/506 (97.8%) over 512bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500513 |________________|_________________|________________|_________________|________________|__| 100f 86% 449bp Sm545full |..........|==============================================================================| YGR174C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR174C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1370 (0.3%). Conflicting: 6/1370 (0.4%). NoInfo: 4/1370 (0.3%). Certain keep: 1356/1370 (99.0%) ########################## YGR175C (1491bp = 497AA) has 5 hits (ERG1) Squalene monooxygenase Spar (test2) orthologous hit at 93% f1491/1491 (100.0%) over 1491bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1064/1490 (71.4%) over 1491bp for offset 0 Smik (test3) Longest island has f100 at 90% over 1064bp <== THIS IS REAL Sbay (test2) orthologous hit at 89% f1491/1491 (100.0%) over 1491bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____| 100f 92% 426bp 100f 90% 1064bp Sm545full |========================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YGR175C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR175C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1371 (0.3%). Conflicting: 6/1371 (0.4%). NoInfo: 4/1371 (0.3%). Certain keep: 1357/1371 (99.0%) ########################## YGR177C (1608bp = 536AA) has 12 hits (ATF2) Alcohol acetyltransferase Flanking ORFs are: YGR174C and YGR176W. YGR177C skipped ########################## YGR178C (2169bp = 723AA) has 8 hits (PBP1) interacts with poly(A)-binding protein Spar (test2) orthologous hit at 90% f2169/2169 (100.0%) over 2169bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2155/2164 (99.6%) over 2169bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2161/2168 (99.7%) over 2169bp for offset 0 <== THIS IS REAL YGR178C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR178C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1372 (0.3%). Conflicting: 6/1372 (0.4%). NoInfo: 4/1372 (0.3%). Certain keep: 1358/1372 (99.0%) ########################## YGR179C (1221bp = 407AA) has 21 hits (OKP1) Outer Kinetochore Protein Spar (test2) orthologous hit at 85% f1221/1221 (100.0%) over 1221bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1203/1214 (99.1%) over 1216bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1177/1211 (97.2%) over 1217bp for offset 0 <== THIS IS REAL YGR179C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR179C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1373 (0.3%). Conflicting: 6/1373 (0.4%). NoInfo: 4/1373 (0.3%). Certain keep: 1359/1373 (99.0%) ########################## YGR180C (1038bp = 346AA) has 11 hits (RNR4) Ribonucleotide Reductase Spar (test2) orthologous hit at 94% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL YGR180C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR180C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1374 (0.3%). Conflicting: 6/1374 (0.4%). NoInfo: 4/1374 (0.3%). Certain keep: 1360/1374 (99.0%) ########################## YGR181W (318bp = 106AA) has 4 hits (TIM13) Subunit of mitochondrial protein impo.. machinery (92) Flanking ORFs are: YGR179C and YGR181W. YGR181W skipped ########################## YGR184C (5853bp = 1951AA) has 28 hits (UBR1) Ubiquitin-protein ligase Spar (test2) orthologous hit at 90% f5841/5851 (99.8%) over 5853bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1086/1090 (99.6%) over 1091bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f2179/2182 (99.9%) over 2183bp for offset 0 <== THIS IS REAL YGR184C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR184C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1375 (0.3%). Conflicting: 6/1375 (0.4%). NoInfo: 4/1375 (0.3%). Certain keep: 1361/1375 (99.0%) ########################## YGR185C (1185bp = 395AA) has 5 hits (TYS1) tyrosyl-tRNA synthetase, cytoplasmic Spar (test2) orthologous hit at 92% f1185/1185 (100.0%) over 1185bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1185/1185 (100.0%) over 1185bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1001/1184 (84.5%) over 1185bp for offset 0 Sbay (test3) Longest island has f100 at 85% over 677bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|______|_______|______|_______|_______|______|_______|______|_______|______| 100f 85% 677bp 98f 83% 331bp Sb697full |==================================================>.............|========================| YGR185C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR185C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1376 (0.3%). Conflicting: 6/1376 (0.4%). NoInfo: 4/1376 (0.3%). Certain keep: 1362/1376 (99.0%) ########################## YGR186W (2208bp = 736AA) has 103 hits (TFG1) Transcription factor TFIIF large subunit Spar (test2) orthologous hit at 89% f1136/1136 (100.0%) over 1136bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1408/1427 (98.7%) over 1430bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 54% f338/568 (59.5%) over 590bp for offset 0 Sbay (test3) Longest island has f91 at 62% over 133bp Sbay (test2) orthologous hit at 56% f141/322 (43.8%) over 342bp for offset 0 Sbay (test3) Longest island has f83 at 61% over 41bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 22k |___|___|___|___|___|___|___|___|___|___|___|___|___|____|___|___|___|___|___|___|___|___|| 83f80f86f 48% 1101091f 62% 133bp Sb698full ||o>|x>|xxx>......|>|xxxx> | 8376f 4580f 8100f 71% 35bp Sb698brk |=|>....|>...|=> | YGR186W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YGR186W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 4/1377 (0.3%). Conflicting: 6/1377 (0.4%). NoInfo: 4/1377 (0.3%). Certain keep: 1363/1377 (99.0%) ########################## YGR187C (1185bp = 395AA) has 299 hits (HGH1) (putative) Hmg1/2 protein Spar (test2) orthologous hit at 89% f1182/1185 (99.7%) over 1185bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f616/625 (98.6%) over 626bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f950/989 (96.1%) over 991bp for offset 0 <== THIS IS REAL YGR187C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR187C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1378 (0.3%). Conflicting: 6/1378 (0.4%). NoInfo: 4/1378 (0.3%). Certain keep: 1364/1378 (99.0%) ########################## YGR188C (3066bp = 1022AA) has 18 hits (BUB1) Serine/threonine protein kinase req..e function (151) Spar (test2) orthologous hit at 88% f2000/2004 (99.8%) over 2005bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f1901/1989 (95.6%) over 1997bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1899/1979 (96.0%) over 1989bp for offset 0 <== THIS IS REAL YGR188C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR188C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1379 (0.3%). Conflicting: 6/1379 (0.4%). NoInfo: 4/1379 (0.3%). Certain keep: 1365/1379 (99.0%) ########################## YGR189C (1524bp = 508AA) has 240 hits (CRH1) Cell wall protein Spar (test2) orthologous hit at 84% f1096/1123 (97.6%) over 1130bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f1092/1111 (98.3%) over 1124bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1132/1176 (96.3%) over 1192bp for offset 1 <== THIS IS REAL YGR189C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR189C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1380 (0.3%). Conflicting: 6/1380 (0.4%). NoInfo: 4/1380 (0.3%). Certain keep: 1366/1380 (99.0%) ########################## YGR191W (1812bp = 604AA) has 54 hits (HIP1) histidine permease Flanking ORFs are: YGR188C and YGR190C. YGR191W skipped ########################## YGR192C (999bp = 333AA) has 17 hits (TDH3) Glyceraldehyde-3-phosphate dehydrogenase 3 Spar (test2) orthologous hit at 98% f999/999 (100.0%) over 999bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 98% f999/999 (100.0%) over 999bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f594/998 (59.5%) over 999bp for offset 2 Sbay (test3) Longest island has f100 at 97% over 588bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 999 |________|________|________|________|________|________|________|________|________|________| 98f 94% 408bp 100f 97% 588bp Sb698full |===================================>|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YGR192C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR192C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1381 (0.3%). Conflicting: 6/1381 (0.4%). NoInfo: 4/1381 (0.3%). Certain keep: 1367/1381 (99.0%) ########################## YGR193C (1233bp = 411AA) has 8 hits (PDX1) Protein X component of mitochondrial ..se complex (110) Spar (test2) orthologous hit at 88% f855/855 (100.0%) over 855bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1226/1229 (99.8%) over 1230bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1181/1228 (96.2%) over 1231bp for offset 0 <== THIS IS REAL YGR193C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR193C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1382 (0.3%). Conflicting: 6/1382 (0.4%). NoInfo: 4/1382 (0.3%). Certain keep: 1368/1382 (99.0%) ########################## YGR194C (1803bp = 601AA) has 9 hits (XKS1) Xylulokinase Spar (test2) orthologous hit at 87% f1759/1799 (97.8%) over 1800bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1123/1129 (99.5%) over 1129bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1018/1069 (95.2%) over 1074bp for offset 0 <== THIS IS REAL YGR194C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR194C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1383 (0.3%). Conflicting: 6/1383 (0.4%). NoInfo: 4/1383 (0.3%). Certain keep: 1369/1383 (99.0%) ########################## YGR195W (741bp = 247AA) has 5 hits (SKI6) homolog of RNAse PH Spar (test2) orthologous hit at 93% f741/741 (100.0%) over 741bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f740/740 (100.0%) over 740bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f739/739 (100.0%) over 739bp for offset 0 <== THIS IS REAL YGR195W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR195W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1384 (0.3%). Conflicting: 6/1384 (0.4%). NoInfo: 4/1384 (0.3%). Certain keep: 1370/1384 (99.0%) ########################## YGR196C (2454bp = 818AA) has 133 hits (FYV8) Hypothetical ORF Spar (test2) orthologous hit at 78% f2150/2425 (88.7%) over 2454bp for offset 0 Spar (test3) Longest island has f100 at 88% over 1038bp <== THIS IS REAL Smik (test2) orthologous hit at 74% f1472/1537 (95.8%) over 1556bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f1224/1415 (86.5%) over 1440bp for offset 0 Sbay (test3) Longest island has f97 at 77% over 1045bp <== THIS IS REAL 0 100 200 300400 500 600700 800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k2k |__|___|___|__|___|___|__|___|___|__|___|___|__|___|___|__|___|___|__|___|___|__|___|___|_| 99f 84% 911bp 100f 88% 1038bp Sp289full |================================>...................|====================================|> 97f 77% 1045bp Sb698full |..............|=====================================| YGR196C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR196C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1385 (0.3%). Conflicting: 6/1385 (0.4%). NoInfo: 4/1385 (0.3%). Certain keep: 1371/1385 (99.0%) ########################## YGR197C (1644bp = 548AA) has 8 hits (SNG1) involved in nitrosoguanidine resistance Spar (test2) orthologous hit at 88% f1622/1622 (100.0%) over 1622bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1640/1643 (99.8%) over 1644bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f892/914 (97.6%) over 920bp for offset 0 <== THIS IS REAL YGR197C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR197C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1386 (0.3%). Conflicting: 6/1386 (0.4%). NoInfo: 4/1386 (0.3%). Certain keep: 1372/1386 (99.0%) ########################## YGR199W (2280bp = 760AA) has 31 hits (PMT6) dolichyl phosphate-D-mannose:protein..ransferase (104) Spar (test2) orthologous hit at 89% f2280/2280 (100.0%) over 2280bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2126/2276 (93.4%) over 2279bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2260/2275 (99.3%) over 2279bp for offset 0 <== THIS IS REAL YGR199W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR199W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1387 (0.3%). Conflicting: 6/1387 (0.4%). NoInfo: 4/1387 (0.3%). Certain keep: 1373/1387 (99.0%) ########################## YGR200C (2367bp = 789AA) has 14 hits (ELP2) 90 kD subunit of elongator and elong..holoenzyme (107) Spar (test2) orthologous hit at 90% f2364/2366 (99.9%) over 2367bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1066/1068 (99.8%) over 1068bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2338/2365 (98.9%) over 2367bp for offset 0 <== THIS IS REAL YGR200C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR200C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1388 (0.3%). Conflicting: 6/1388 (0.4%). NoInfo: 4/1388 (0.3%). Certain keep: 1374/1388 (99.0%) ########################## YGR202C (1275bp = 425AA) has 11 hits (PCT1) phosphorylcholine transferase; or ch..ransferase (115) Spar (test2) orthologous hit at 88% f1196/1236 (96.8%) over 1238bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1224/1225 (99.9%) over 1225bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1237/1269 (97.5%) over 1275bp for offset 0 <== THIS IS REAL YGR202C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR202C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1389 (0.3%). Conflicting: 6/1389 (0.4%). NoInfo: 4/1389 (0.3%). Certain keep: 1375/1389 (99.0%) ########################## YGR204W (2841bp = 947AA) has 15 hits (ADE3) encodes the cytoplasmic trifunctiona..e synthase (117) Spar (test2) orthologous hit at 91% f2841/2841 (100.0%) over 2841bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2841/2841 (100.0%) over 2841bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2831/2839 (99.7%) over 2841bp for offset 0 <== THIS IS REAL YGR204W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR204W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1390 (0.3%). Conflicting: 6/1390 (0.4%). NoInfo: 4/1390 (0.3%). Certain keep: 1376/1390 (99.0%) ########################## YGR208W (930bp = 310AA) has 5 hits (SER2) phosphoserine phosphatase Spar (test2) orthologous hit at 87% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f919/926 (99.2%) over 928bp for offset 0 <== THIS IS REAL YGR208W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR208W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1391 (0.3%). Conflicting: 6/1391 (0.4%). NoInfo: 4/1391 (0.3%). Certain keep: 1377/1391 (99.0%) ########################## YGR209C (315bp = 105AA) has 11 hits (TRX2) thioredoxin Spar (test2) orthologous hit at 93% f315/315 (100.0%) over 315bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f315/315 (100.0%) over 315bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f314/314 (100.0%) over 314bp for offset 0 <== THIS IS REAL YGR209C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR209C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1392 (0.3%). Conflicting: 6/1392 (0.4%). NoInfo: 4/1392 (0.3%). Certain keep: 1378/1392 (99.0%) ########################## YGR211W (1461bp = 487AA) has 8 hits (ZPR1) zinc finger protein Spar (test2) orthologous hit at 91% f1461/1461 (100.0%) over 1461bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1066/1072 (99.4%) over 1074bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1056/1418 (74.5%) over 1421bp for offset 1 Sbay (test3) Longest island has f99 at 81% over 1065bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|______|_____|_____|_____|_____|_____|______|_____|___| 99f 81% 1065bp 98f 85% 356bp Sb700full |ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo|xxxxxxxxxxxxxxxxxxxxx| YGR211W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR211W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1393 (0.3%). Conflicting: 6/1393 (0.4%). NoInfo: 4/1393 (0.3%). Certain keep: 1379/1393 (99.0%) ########################## YGR213C (954bp = 318AA) has 17 hits (RTA1) involved in 7-aminocholesterol resistance Spar (test2) orthologous hit at 87% f940/954 (98.5%) over 954bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 78% f954/954 (100.0%) over 954bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f921/947 (97.3%) over 951bp for offset 0 <== THIS IS REAL YGR213C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR213C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1394 (0.3%). Conflicting: 6/1394 (0.4%). NoInfo: 4/1394 (0.3%). Certain keep: 1380/1394 (99.0%) ########################## YGR215W (333bp = 111AA) has 6 hits (RSM27) mitochondrial ribosome small subunit component Spar (test2) orthologous hit at 91% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f333/333 (100.0%) over 333bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f321/330 (97.3%) over 331bp for offset 0 <== THIS IS REAL YGR215W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR215W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1395 (0.3%). Conflicting: 6/1395 (0.4%). NoInfo: 4/1395 (0.3%). Certain keep: 1381/1395 (99.0%) ########################## YGR216C (1830bp = 610AA) has 19 hits (GPI1) involved in first step of GPI (N-ace.. synthesis (133) Spar (test2) orthologous hit at 89% f1830/1830 (100.0%) over 1830bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1817/1827 (99.5%) over 1830bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1816/1827 (99.4%) over 1829bp for offset 0 <== THIS IS REAL YGR216C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR216C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1396 (0.3%). Conflicting: 6/1396 (0.4%). NoInfo: 4/1396 (0.3%). Certain keep: 1382/1396 (99.0%) ########################## YGR217W (6120bp = 2040AA) has 13 hits (CCH1) putative calcium channel Spar (test2) orthologous hit at 90% f6108/6118 (99.8%) over 6120bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f4770/4811 (99.1%) over 4814bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f5392/5433 (99.2%) over 5438bp for offset 0 <== THIS IS REAL YGR217W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR217W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1397 (0.3%). Conflicting: 6/1397 (0.4%). NoInfo: 4/1397 (0.3%). Certain keep: 1383/1397 (99.0%) ########################## YGR218W (3255bp = 1085AA) has 25 hits (CRM1) Chromosome region maintenance protein Spar (test2) orthologous hit at 92% f3255/3255 (100.0%) over 3255bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 89% f3251/3254 (99.9%) over 3255bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f3247/3253 (99.8%) over 3255bp for offset 0 <== THIS IS REAL YGR218W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR218W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1398 (0.3%). Conflicting: 6/1398 (0.4%). NoInfo: 4/1398 (0.3%). Certain keep: 1384/1398 (99.0%) ########################## YGR220C (810bp = 270AA) has 5 hits (MRPL9) Mitochondrial ribosomal protein MRPL9..uman MRL3) (113) Flanking ORFs are: YGR217W and YGR219W. YGR220C skipped ########################## YGR221C (1869bp = 623AA) has 20 hits (TOS2) Hypothetical ORF Spar (test2) orthologous hit at 82% f1082/1184 (91.4%) over 1189bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 72% f1325/1427 (92.9%) over 1437bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f1437/1743 (82.4%) over 1776bp for offset 0 Sbay (test3) Longest island has f90 at 69% over 554bp Sbay (test2) orthologous hit at 71% f92/102 (90.2%) over 103bp for offset 0 Sbay (test3) Longest island has f86 at 72% over 107bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|____|___|____|____|____|____|___|____|____|____|____|____|___|____|___| 97f 76% 209bp 90f 69% 554bp 93f 72% 469bp Sb700full |........|=========>......|==========================>...|=====================>......| 86f 72% 107bp Sb700full |====> | YGR221C: kill: Sbay Sbay - keep: Spar Smik YGR221C - Conflicting. Kill (Sbay) and Keep (Spar Smik) Current total: Certain kills: 4/1399 (0.3%). Conflicting: 7/1399 (0.5%). NoInfo: 4/1399 (0.3%). Certain keep: 1384/1399 (98.9%) ########################## YGR222W (882bp = 294AA) has 9 hits (PET54) Spar (test2) orthologous hit at 85% f842/845 (99.6%) over 846bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f835/875 (95.4%) over 880bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f815/873 (93.4%) over 882bp for offset 0 <== THIS IS REAL YGR222W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR222W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1400 (0.3%). Conflicting: 7/1400 (0.5%). NoInfo: 4/1400 (0.3%). Certain keep: 1385/1400 (98.9%) ########################## YGR224W (1842bp = 614AA) has 20 hits (AZR1) MFS-MDR Spar (test2) orthologous hit at 86% f1827/1840 (99.3%) over 1842bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 59% f787/996 (79.0%) over 1024bp for offset 0 Smik (test3) Longest island has f83 at 61% over 340bp Smik (test2) non-orthologous hit at 56% f715/983 (72.7%) over 1022bp for offset 2 Smik (test3) Longest island has f86 at 55% over 264bp Smik (test2) non-orthologous hit at 81% f467/641 (72.9%) over 642bp for offset 0 Smik (test3) Longest island has f98 at 81% over 475bp <== THIS IS REAL Sbay (test2) orthologous hit at 65% f60/167 (35.9%) over 177bp for offset 1 Sbay (test3) Longest island has f94 at 80% over 64bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|____|____|____|____|___|____|____|____|____|____|____|____|____|___|__| 84f 60% 252bp 79f 58% 214bp 83f 61% 340bp Sm124full |.|xxxxxxxxxxx>.|xxxxxxxxx>........|xxxxxxxxxxxxxxx| 80f 58% 218bp 73f 58% 201bp 86f 55% 264bSm208full ||xxxxxxxxxx>...........|xxxxxxxx>.....|xxxxxxxxxxx|> 98f 81% 475bp Sm798brk |.......|ooooooooooooooooooooooo| 10094f 10Sb701brk2 |=>|oo>|x| YGR224W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YGR224W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 4/1401 (0.3%). Conflicting: 7/1401 (0.5%). NoInfo: 4/1401 (0.3%). Certain keep: 1386/1401 (98.9%) ########################## YGR227W (1578bp = 526AA) has 24 hits (DIE2) glucosyltransferase Spar (test2) orthologous hit at 91% f1573/1577 (99.7%) over 1578bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1572/1577 (99.7%) over 1578bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1578/1578 (100.0%) over 1578bp for offset 0 <== THIS IS REAL YGR227W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR227W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1402 (0.3%). Conflicting: 7/1402 (0.5%). NoInfo: 4/1402 (0.3%). Certain keep: 1387/1402 (98.9%) ########################## YGR229C (1518bp = 506AA) has 94 hits (SMI1) 57 kDa nuclear protein Flanking ORFs are: YGR226C and YGR228W. YGR229C skipped ########################## YGR230W (414bp = 138AA) has 12 hits (BNS1) similar to Spo12, involved in sporulation Spar (test2) orthologous hit at 81% f410/413 (99.3%) over 414bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 69% f377/407 (92.6%) over 414bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f356/400 (89.0%) over 409bp for offset 0 Sbay (test3) Longest island has f85 at 68% over 418bp 0 100 200 300 400 414 |____________________|_____________________|_____________________|____________________|___| 85f 68% 418bp Sb702full |=========================================================================================|> YGR230W: kill: Sbay - keep: Spar Smik YGR230W - Conflicting. Kill (Sbay) and Keep (Spar Smik) Current total: Certain kills: 4/1403 (0.3%). Conflicting: 8/1403 (0.6%). NoInfo: 4/1403 (0.3%). Certain keep: 1387/1403 (98.9%) ########################## YGR231C (948bp = 316AA) has 9 hits (PHB2) mitochondrial protein, prohibitin homo..siae Phb1p (135) Spar (test2) orthologous hit at 91% f919/946 (97.1%) over 948bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 87% f921/946 (97.4%) over 948bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f919/937 (98.1%) over 939bp for offset 0 <== THIS IS REAL YGR231C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR231C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1404 (0.3%). Conflicting: 8/1404 (0.6%). NoInfo: 4/1404 (0.3%). Certain keep: 1388/1404 (98.9%) ########################## YGR232W (687bp = 229AA) has 7 hits (NAS6) Spar (test2) orthologous hit at 92% f687/687 (100.0%) over 687bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f687/687 (100.0%) over 687bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f687/687 (100.0%) over 687bp for offset 0 <== THIS IS REAL YGR232W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR232W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1405 (0.3%). Conflicting: 8/1405 (0.6%). NoInfo: 4/1405 (0.3%). Certain keep: 1389/1405 (98.9%) ########################## YGR233C (3537bp = 1179AA) has 684 hits (PHO81) Pho85 kinase inhibitor Spar (test2) orthologous hit at 85% f3008/3150 (95.5%) over 3162bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2851/2857 (99.8%) over 2858bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2845/2962 (96.0%) over 2978bp for offset 0 <== THIS IS REAL YGR233C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR233C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1406 (0.3%). Conflicting: 8/1406 (0.6%). NoInfo: 4/1406 (0.3%). Certain keep: 1390/1406 (98.9%) ########################## YGR234W (1200bp = 400AA) has 6 hits (YHB1) Flavohemoglobin Spar (test2) orthologous hit at 89% f1186/1198 (99.0%) over 1200bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1192/1198 (99.5%) over 1199bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1199/1199 (100.0%) over 1199bp for offset 0 <== THIS IS REAL YGR234W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR234W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 4/1407 (0.3%). Conflicting: 8/1407 (0.6%). NoInfo: 4/1407 (0.3%). Certain keep: 1391/1407 (98.9%) ########################## YGR236C (390bp = 130AA) has 8 hits (SPG1) Hypothetical ORF Spar (test2) orthologous hit at 84% f272/388 (70.1%) over 390bp for offset 2 Spar (test3) Longest island has f100 at 89% over 272bp Smik (test2) orthologous hit at 77% f306/385 (79.5%) over 390bp for offset 0 Smik (test3) Longest island has f96 at 82% over 274bp Sbay (test2) orthologous hit at 75% f284/361 (78.7%) over 367bp for offset 0 Sbay (test3) Longest island has f100 at 81% over 273bp 0 100 200 300 390 |______________________|______________________|______________________|____________________| 100f 89% 272bp Sp290full |==============================================================>..........................| 96f 82% 274bp 100f 100Sm796full |==============================================================>..................|ooo>|==|=> 100f 81% 273bp Sb702full |==============================================================>....................> | YGR236C: kill: Spar Sbay - keep: YGR236C - Certain Kill. Kill (Spar Sbay) and Keep () Current total: Certain kills: 5/1408 (0.4%). Conflicting: 8/1408 (0.6%). NoInfo: 4/1408 (0.3%). Certain keep: 1391/1408 (98.8%) ########################## YGR238C (2649bp = 883AA) has 28 hits (KEL2) involved in cell fusion and morpholo..ch repeats (110) Spar (test2) orthologous hit at 83% f2639/2642 (99.9%) over 2649bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1501/1517 (98.9%) over 1520bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1321/1500 (88.1%) over 1505bp for offset 1 Sbay (test3) Longest island has f98 at 76% over 1346bp <== THIS IS REAL 0 100200 300400500 600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k2k |__|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|_| 98f 76% 1346bp Sb703full |....|ooooooooooooooooooooooooooooooooooooooooooooo> | YGR238C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR238C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1409 (0.4%). Conflicting: 8/1409 (0.6%). NoInfo: 4/1409 (0.3%). Certain keep: 1392/1409 (98.8%) ########################## YGR239C (867bp = 289AA) has 3 hits (PEX21) Peroxin Pex21p Spar (test2) orthologous hit at 85% f859/863 (99.5%) over 867bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f853/862 (99.0%) over 867bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f807/852 (94.7%) over 864bp for offset 0 <== THIS IS REAL YGR239C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR239C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1410 (0.4%). Conflicting: 8/1410 (0.6%). NoInfo: 4/1410 (0.3%). Certain keep: 1393/1410 (98.8%) ########################## YGR240C (2964bp = 988AA) has 15 hits (PFK1) phosphofructokinase alpha subunit Spar (test2) orthologous hit at 93% f2964/2964 (100.0%) over 2964bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2964/2964 (100.0%) over 2964bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f2959/2963 (99.9%) over 2964bp for offset 0 <== THIS IS REAL YGR240C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR240C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1411 (0.4%). Conflicting: 8/1411 (0.6%). NoInfo: 4/1411 (0.3%). Certain keep: 1394/1411 (98.8%) ########################## YGR241C (1707bp = 569AA) has 64 hits (YAP1802) member of clathrin assembly polyp..180 family (99) Flanking ORFs are: YGR239C and YGR241C. YGR241C skipped ########################## YGR244C (1284bp = 428AA) has 5 hits (LSC2) Succinate-CoA Ligase (ADP-Forming) Spar (test2) orthologous hit at 92% f1284/1284 (100.0%) over 1284bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1280/1283 (99.8%) over 1284bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1253/1282 (97.7%) over 1284bp for offset 0 <== THIS IS REAL YGR244C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR244C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1412 (0.4%). Conflicting: 8/1412 (0.6%). NoInfo: 4/1412 (0.3%). Certain keep: 1395/1412 (98.8%) ########################## YGR245C (2304bp = 768AA) has 112 hits (SDA1) Severe Depolymerization of Actin Spar (test2) orthologous hit at 91% f2298/2302 (99.8%) over 2303bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1249/1253 (99.7%) over 1254bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2290/2301 (99.5%) over 2304bp for offset 0 <== THIS IS REAL YGR245C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR245C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1413 (0.4%). Conflicting: 8/1413 (0.6%). NoInfo: 4/1413 (0.3%). Certain keep: 1396/1413 (98.8%) ########################## YGR246C (1791bp = 597AA) has 27 hits (BRF1) RNA polymerase III transcription fac..y to TFIIB (106) Spar (test2) orthologous hit at 87% f1585/1609 (98.5%) over 1619bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1770/1788 (99.0%) over 1791bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1195/1248 (95.8%) over 1252bp for offset 0 <== THIS IS REAL YGR246C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR246C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1414 (0.4%). Conflicting: 8/1414 (0.6%). NoInfo: 4/1414 (0.3%). Certain keep: 1397/1414 (98.8%) ########################## YGR247W (720bp = 240AA) has 5 hits (CPD1) Hypothetical ORF Spar (test2) orthologous hit at 91% f720/720 (100.0%) over 720bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f720/720 (100.0%) over 720bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f472/472 (100.0%) over 472bp for offset 0 <== THIS IS REAL YGR247W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR247W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1415 (0.4%). Conflicting: 8/1415 (0.6%). NoInfo: 4/1415 (0.3%). Certain keep: 1398/1415 (98.8%) ########################## YGR248W (768bp = 256AA) has 8 hits (SOL4) similar to SOL3 Spar (test2) orthologous hit at 87% f767/767 (100.0%) over 767bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f762/766 (99.5%) over 767bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f746/764 (97.6%) over 767bp for offset 0 <== THIS IS REAL YGR248W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR248W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1416 (0.4%). Conflicting: 8/1416 (0.6%). NoInfo: 4/1416 (0.3%). Certain keep: 1399/1416 (98.8%) ########################## YGR249W (1371bp = 457AA) has 30 hits (MGA1) Mga1p shows similarity to heat shock..ion factor (101) Spar (test2) orthologous hit at 89% f1360/1362 (99.9%) over 1371bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f921/1037 (88.8%) over 1048bp for offset 0 Smik (test3) Longest island has f98 at 84% over 867bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f539/555 (97.1%) over 559bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|_____|______|_____|______|______|_____|______|_____|______|____| 98f 84% 867bp Sm792full |=======================================================>...........> | YGR249W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR249W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1417 (0.4%). Conflicting: 8/1417 (0.6%). NoInfo: 4/1417 (0.3%). Certain keep: 1400/1417 (98.8%) ########################## YGR252W (1320bp = 440AA) has 17 hits (GCN5) histone acetyltransferase Spar (test2) orthologous hit at 92% f1320/1320 (100.0%) over 1320bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1316/1319 (99.8%) over 1320bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1320/1320 (100.0%) over 1320bp for offset 0 <== THIS IS REAL YGR252W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR252W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1418 (0.4%). Conflicting: 8/1418 (0.6%). NoInfo: 4/1418 (0.3%). Certain keep: 1401/1418 (98.8%) ########################## YGR253C (783bp = 261AA) has 12 hits (PUP2) Proteasome subunit Spar (test2) orthologous hit at 92% f783/783 (100.0%) over 783bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f783/783 (100.0%) over 783bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f783/783 (100.0%) over 783bp for offset 0 <== THIS IS REAL YGR253C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR253C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1419 (0.4%). Conflicting: 8/1419 (0.6%). NoInfo: 4/1419 (0.3%). Certain keep: 1402/1419 (98.8%) ########################## YGR254W (1314bp = 438AA) has 10 hits (ENO1) enolase I Spar (test2) orthologous hit at 97% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f1313/1313 (100.0%) over 1313bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 92% f1307/1313 (99.5%) over 1314bp for offset 0 <== THIS IS REAL YGR254W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR254W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1420 (0.4%). Conflicting: 8/1420 (0.6%). NoInfo: 4/1420 (0.3%). Certain keep: 1403/1420 (98.8%) ########################## YGR255C (1440bp = 480AA) has 6 hits (COQ6) COQ6 monooxygenase Spar (test2) orthologous hit at 91% f1433/1439 (99.6%) over 1440bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1436/1439 (99.8%) over 1440bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1426/1430 (99.7%) over 1431bp for offset 0 <== THIS IS REAL YGR255C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR255C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1421 (0.4%). Conflicting: 8/1421 (0.6%). NoInfo: 4/1421 (0.3%). Certain keep: 1404/1421 (98.8%) ########################## YGR256W (1479bp = 493AA) has 13 hits (GND2) 6-phosphogluconate dehydrogenase Spar (test2) orthologous hit at 91% f1479/1479 (100.0%) over 1479bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f226/607 (37.2%) over 614bp for offset 0 Smik (test3) Longest island has f100 at 88% over 147bp Smik (test2) orthologous hit at 82% f339/396 (85.6%) over 400bp for offset 2 Smik (test3) Longest island has f96 at 83% over 354bp <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1472/1477 (99.7%) over 1478bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|______|_____|_____|____| 100f 81%100f 88% 100f 86% 115bp100f 86Sm791full |=======|xxxxxxxx|oooooo>......|oooooo| 96f 83% 354bp Sm791full ||xxxxxxxxxxxxxxxxxxxxx>> | YGR256W: kill: Smik - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR256W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1422 (0.4%). Conflicting: 8/1422 (0.6%). NoInfo: 4/1422 (0.3%). Certain keep: 1405/1422 (98.8%) ########################## YGR258C (3096bp = 1032AA) has 35 hits (RAD2) homolog of xeroderma pigmentosum gr.. induction (279) Spar (test2) orthologous hit at 85% f1818/1835 (99.1%) over 1839bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f3055/3091 (98.8%) over 3096bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f557/620 (89.8%) over 623bp for offset 0 Sbay (test3) Longest island has f96 at 81% over 581bp <== THIS IS REAL 0 1002003004005006007008009001k1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k2k 2k 2k 2k 2k 2k 2k 2k 3k 3k |_|__|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__|__| 96f 81% 581bp Sb706brk |===============>.> | YGR258C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR258C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1423 (0.4%). Conflicting: 8/1423 (0.6%). NoInfo: 4/1423 (0.3%). Certain keep: 1406/1423 (98.8%) ########################## YGR260W (1605bp = 535AA) has 4 hits (TNA1) Tna1p is a high affinity nicotinic ac..e permease (107) Flanking ORFs are: YGR257C and YGR259C. YGR260W skipped ########################## YGR261C (2430bp = 810AA) has 13 hits (APL6) putative beta adaptin component of t..ly complex (127) Spar (test2) orthologous hit at 91% f1724/1724 (100.0%) over 1724bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1720/1725 (99.7%) over 1727bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1710/1727 (99.0%) over 1730bp for offset 0 <== THIS IS REAL YGR261C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR261C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1424 (0.4%). Conflicting: 8/1424 (0.6%). NoInfo: 4/1424 (0.3%). Certain keep: 1407/1424 (98.8%) ########################## YGR262C (786bp = 262AA) has 4 hits (BUD32) Spar (test2) orthologous hit at 91% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f779/784 (99.4%) over 786bp for offset 0 <== THIS IS REAL YGR262C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR262C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1425 (0.4%). Conflicting: 8/1425 (0.6%). NoInfo: 4/1425 (0.3%). Certain keep: 1408/1425 (98.8%) ########################## YGR264C (2256bp = 752AA) has 7 hits (MES1) methionyl tRNA synthetase Flanking ORFs are: YGR261C and YGR263C. YGR264C skipped ########################## YGR267C (732bp = 244AA) has 7 hits (FOL2) GTP-cyclohydrolase I Spar (test2) orthologous hit at 93% f732/732 (100.0%) over 732bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f732/732 (100.0%) over 732bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f727/731 (99.5%) over 732bp for offset 0 <== THIS IS REAL YGR267C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR267C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1426 (0.4%). Conflicting: 8/1426 (0.6%). NoInfo: 4/1426 (0.3%). Certain keep: 1409/1426 (98.8%) ########################## YGR270W (4140bp = 1380AA) has 331 hits (YTA7) 26S proteasome ATPase Spar (test2) orthologous hit at 86% f3694/3742 (98.7%) over 3750bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f3482/3706 (94.0%) over 3739bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f2937/2981 (98.5%) over 2983bp for offset 1 <== THIS IS REAL YGR270W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR270W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1427 (0.4%). Conflicting: 8/1427 (0.6%). NoInfo: 4/1427 (0.3%). Certain keep: 1410/1427 (98.8%) ########################## YGR271W (5904bp = 1968AA) has 46 hits (SLH1) Spar (test2) orthologous hit at 90% f5891/5901 (99.8%) over 5904bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f5868/5898 (99.5%) over 5904bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f3986/4017 (99.2%) over 4024bp for offset 0 <== THIS IS REAL YGR271W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR271W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1428 (0.4%). Conflicting: 8/1428 (0.6%). NoInfo: 4/1428 (0.3%). Certain keep: 1411/1428 (98.8%) ########################## YGR274C (3201bp = 1067AA) (tdist=47.8k) has 47 hits (TAF1) TFIID 145 KDa subunit Spar (test2) orthologous hit at 90% f3196/3200 (99.9%) over 3201bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3190/3196 (99.8%) over 3201bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3153/3187 (98.9%) over 3201bp for offset 0 <== THIS IS REAL YGR274C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR274C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1429 (0.3%). Conflicting: 8/1429 (0.6%). NoInfo: 4/1429 (0.3%). Certain keep: 1412/1429 (98.8%) ########################## YGR275W (561bp = 187AA) (tdist=47.1k) has 5 hits (RTT102) regulator of Ty1 transposition Spar (test2) orthologous hit at 88% f500/560 (89.3%) over 561bp for offset 1 Spar (test3) Longest island has f99 at 88% over 505bp <== THIS IS REAL Smik (test2) orthologous hit at 81% f475/558 (85.1%) over 561bp for offset 0 Smik (test3) Longest island has f98 at 82% over 477bp <== THIS IS REAL Sbay (test2) orthologous hit at 70% f473/550 (86.0%) over 553bp for offset 0 Sbay (test3) Longest island has f98 at 72% over 480bp <== THIS IS REAL 0 100 200 300 400 500 561 |_______________|_______________|_______________|_______________|_______________|_________| 99f 88% 505bp Sp291full |........|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| 98f 82% 477bp Sm791full |.............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 98f 72% 480bp Sb712full |............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YGR275W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR275W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1430 (0.3%). Conflicting: 8/1430 (0.6%). NoInfo: 4/1430 (0.3%). Certain keep: 1413/1430 (98.8%) ########################## YGR276C (1662bp = 554AA) (tdist=45.4k) has 14 hits (RNH70) ribonuclease H Spar (test2) orthologous hit at 88% f1659/1659 (100.0%) over 1662bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1655/1658 (99.8%) over 1662bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1648/1657 (99.5%) over 1662bp for offset 0 <== THIS IS REAL YGR276C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR276C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1431 (0.3%). Conflicting: 8/1431 (0.6%). NoInfo: 4/1431 (0.3%). Certain keep: 1414/1431 (98.8%) ########################## YGR278W (1734bp = 578AA) (tdist=42.4k) has 37 hits (CWC22) Protein required for .. viability (94) Spar (test2) orthologous hit at 87% f1734/1734 (100.0%) over 1734bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1045/1050 (99.5%) over 1052bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1685/1722 (97.9%) over 1734bp for offset 0 <== THIS IS REAL YGR278W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR278W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1432 (0.3%). Conflicting: 8/1432 (0.6%). NoInfo: 4/1432 (0.3%). Certain keep: 1415/1432 (98.8%) ########################## YGR279C (1161bp = 387AA) (tdist=40.9k) has 77 hits (SCW4) soluble cell wall prot..conditions (156) Spar (test2) orthologous hit at 93% f1160/1161 (99.9%) over 1161bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1149/1159 (99.1%) over 1160bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f300/328 (91.5%) over 331bp for offset 0 <== THIS IS REAL YGR279C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR279C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1433 (0.3%). Conflicting: 8/1433 (0.6%). NoInfo: 4/1433 (0.3%). Certain keep: 1416/1433 (98.8%) ########################## YGR281W (4434bp = 1478AA) (tdist=33.6k) has 52 hits (YOR1) ABC transporter Spar (test2) non-orthologous hit at 90% f2847/4326 (65.8%) over 4326bp for offset 0 Spar (test3) Longest island has f100 at 90% over 2847bp <== THIS IS REAL Smik (test2) orthologous hit at 84% f4434/4434 (100.0%) over 4434bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f2821/2850 (99.0%) over 2856bp for offset 0 <== THIS IS REAL 0 1020304050607080901k1k1k1k1k1k1k1k1k1k2k2k2k2k2k2k2k2k2k2k3k3k3k3k 3k3k3k3k3k3k4k4k4k4k44k |_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|_|| 100f 90% 2847bp 100f 91% 1479bp Sp292brk |=========================================================|ooooooooooooooooooooooooooooo| YGR281W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR281W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1434 (0.3%). Conflicting: 8/1434 (0.6%). NoInfo: 4/1434 (0.3%). Certain keep: 1417/1434 (98.8%) ########################## YGR282C (942bp = 314AA) (tdist=32.2k) has 6 hits (BGL2) Cell wall endo-beta-1,3-glucanase Spar (test2) orthologous hit at 94% f246/316 (77.8%) over 317bp for offset 2 Spar (test3) Longest island has f100 at 95% over 246bp Smik (test2) orthologous hit at 91% f942/942 (100.0%) over 942bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f534/942 (56.7%) over 942bp for offset 0 Sbay (test3) Longest island has f100 at 87% over 534bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 942 |________|_________|________|_________|________|_________|________|_________|________|____| 100f 95% 246bp Sp293brk |======================>......> | 100f 87% 534bp 100f 89% 408bp Sb874full |==================================================|oooooooooooooooooooooooooooooooooooooo| YGR282C: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YGR282C - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 5/1435 (0.3%). Conflicting: 8/1435 (0.6%). NoInfo: 4/1435 (0.3%). Certain keep: 1418/1435 (98.8%) ########################## YGR284C (933bp = 311AA) (tdist=29.3k) has 5 hits (ERV29) ER-Golgi transport..le protein (96) Spar (test2) orthologous hit at 93% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL YGR284C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR284C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1436 (0.3%). Conflicting: 8/1436 (0.6%). NoInfo: 4/1436 (0.3%). Certain keep: 1419/1436 (98.8%) ########################## YGR285C (1302bp = 434AA) (tdist=27.7k) has 54 hits (ZUO1) Zuotin, putative Z-DNA..ng protein (96) Spar (test2) orthologous hit at 92% f1302/1302 (100.0%) over 1302bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1302/1302 (100.0%) over 1302bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1295/1301 (99.5%) over 1302bp for offset 0 <== THIS IS REAL YGR285C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR285C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1437 (0.3%). Conflicting: 8/1437 (0.6%). NoInfo: 4/1437 (0.3%). Certain keep: 1420/1437 (98.8%) ########################## YGR286C (1128bp = 376AA) (tdist=25.9k) has 6 hits (BIO2) Biotin synthase Spar (test2) orthologous hit at 92% f1124/1127 (99.7%) over 1128bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1128/1128 (100.0%) over 1128bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1128/1128 (100.0%) over 1128bp for offset 0 <== THIS IS REAL YGR286C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR286C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1438 (0.3%). Conflicting: 8/1438 (0.6%). NoInfo: 4/1438 (0.3%). Certain keep: 1421/1438 (98.8%) ########################## YGR288W (1422bp = 474AA) (tdist=19.2k) has 25 hits (MAL13) MAL-activator protein Spar (test2) orthologous hit at 81% f1409/1420 (99.2%) over 1422bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1415/1421 (99.6%) over 1422bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 71% f1362/1388 (98.1%) over 1389bp for offset 0 <== THIS IS REAL YGR288W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR288W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1439 (0.3%). Conflicting: 8/1439 (0.6%). NoInfo: 4/1439 (0.3%). Certain keep: 1422/1439 (98.8%) ########################## YGR289C (1851bp = 617AA) (tdist=15.1k) has 18 hits (MAL11) Alpha-glucoside trans..e permease (104) Flanking ORFs are: YGR287C and YGR289C. YGR289C skipped ########################## YGR292W (1755bp = 585AA) (tdist=12.5k) has 65 hits (MAL12) Maltase Spar (test2) non-orthologous hit at 88% f1743/1752 (99.5%) over 1754bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1735/1752 (99.0%) over 1755bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f1418/1436 (98.7%) over 1440bp for offset 0 <== THIS IS REAL YGR292W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR292W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1440 (0.3%). Conflicting: 8/1440 (0.6%). NoInfo: 4/1440 (0.3%). Certain keep: 1423/1440 (98.8%) ########################## YGR295C (1146bp = 382AA) (tdist=8.2k) has 78 hits (COS6) similar to other subtel..d proteins (107) Spar (test2) non-orthologous hit at 80% f744/1132 (65.7%) over 1145bp for offset 2 Spar (test3) Longest island has f89 at 78% over 366bp Spar (test2) non-orthologous hit at 79% f1108/1135 (97.6%) over 1145bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f1092/1136 (96.1%) over 1145bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 66% f572/1124 (50.9%) over 1145bp for offset 2 Sbay (test3) Longest island has f96 at 68% over 413bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|______|_______|_______|_______|_______|___| 89f 78% 366bp 100f 88% 240bp 96f 85% 315bp Sp394full |......|xxxxxxxxxxxxxxxxxxxxxxxxxxxx|oooooooooooooooooo>..........|xxxxxxxxxxxxxxxxxxxxxxx|> 96f 68% 413bp 98f 74% 308bp Sb206full |.......................|===============================>.........|xxxxxxxxxxxxxxxxxxxxxxx|> YGR295C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YGR295C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1441 (0.3%). Conflicting: 8/1441 (0.6%). NoInfo: 4/1441 (0.3%). Certain keep: 1424/1441 (98.8%) ########################## YHL048W (1146bp = 382AA) (tdist=6.4k) has 66 hits (COS8) similar to other subtel..d proteins (107) Spar (test2) non-orthologous hit at 78% f759/1130 (67.2%) over 1146bp for offset 2 Spar (test3) Longest island has f90 at 78% over 459bp Spar (test2) non-orthologous hit at 78% f1100/1137 (96.7%) over 1146bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 75% f1087/1135 (95.8%) over 1146bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 64% f606/1121 (54.1%) over 1146bp for offset 2 Sbay (test3) Longest island has f95 at 65% over 460bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|______|_______|_______|_______|_______|___| 92f 76% 371bp 98f 84% 245bp 90f 78% 459bp Sp394full |......|xxxxxxxxxxxxxxxxxxxxxxxxxxxx|oooooooooooooooooo|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> 95f 65% 460bp 91f 70% 327bp Sb206full |.......................|===================================>....|xxxxxxxxxxxxxxxxxxxxxxxx|> YHL048W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL048W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1442 (0.3%). Conflicting: 8/1442 (0.6%). NoInfo: 4/1442 (0.3%). Certain keep: 1425/1442 (98.8%) ########################## YHL047C (1914bp = 638AA) (tdist=8.2k) has 16 hits (ARN2) Triacetylfusarinine C transporter Spar (test2) non-orthologous hit at 64% f1474/1691 (87.2%) over 1728bp for offset 0 Spar (test3) Longest island has f86 at 65% over 1212bp Spar (test2) non-orthologous hit at 58% f1309/1750 (74.8%) over 1817bp for offset 0 Spar (test3) Longest island has f89 at 62% over 362bp Spar (test2) non-orthologous hit at 58% f1037/1366 (75.9%) over 1419bp for offset 0 Spar (test3) Longest island has f89 at 63% over 362bp Smik (test2) non-orthologous hit at 64% f1386/1551 (89.4%) over 1583bp for offset 0 Smik (test3) Longest island has f88 at 66% over 1290bp Smik (test2) non-orthologous hit at 58% f1160/1503 (77.2%) over 1549bp for offset 0 Smik (test3) Longest island has f85 at 57% over 426bp Smik (test2) non-orthologous hit at 60% f716/1381 (51.8%) over 1421bp for offset 0 Smik (test3) Longest island has f82 at 65% over 379bp Smik (test2) non-orthologous hit at 62% f412/641 (64.3%) over 660bp for offset 2 Smik (test3) Longest island has f77 at 65% over 291bp Sbay (test2) non-orthologous hit at 64% f1494/1662 (89.9%) over 1693bp for offset 0 Sbay (test3) Longest island has f87 at 64% over 1716bp Sbay (test2) non-orthologous hit at 57% f1244/1513 (82.2%) over 1552bp for offset 0 Sbay (test3) Longest island has f90 at 56% over 347bp Sbay (test2) non-orthologous hit at 54% f235/680 (34.6%) over 723bp for offset 2 Sbay (test3) Longest island has f70 at 58% over 53bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 11k |___|____|____|___|____|____|___|____|____|____|___|____|____|___|____|____|___|____|____|| 84f 63% 495bp 86f 65% 1212bp Sp38full |.|======================>|========================================================> | 89f 62% 362bp 81f 61% 297bp 77f 57% 342bp Sp403full |..............|===============>.....|=============>.|===============>...............> | 89f 63% 362bp 81f 61% 297bp 77f 57% 342bp Sp84brk |..............|===============>.....|=============>.|===============> | 93f 58% 257bp88f 66% 1290bp Sm322brk |.|===========>|============================================================> | 82f 62% 257bp 85f 57% 426bp 89f 58% 132bp Sm202full |..|===========>.............|===================>..............|=====>.> | 90f 59% 82f 65% 379bp 93f 63%87f 59% 230bp 83f 62% 160bp Sm124brk |..|=====>.|=================>..|======|oooooooooo>........|oooooo>> | 77f 65% 291bp 93f 63%94f 60% 114bp Sm637brk |..|xxxxxxxxxxxxx>..|xxxxxx|=====> | 87f 64% 1716bp Sb633full ||xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | 89f 59% 322bp 87f 59% 246bp 90f 56% 347bp Sb280full |==============>.|==========>.........|================>................> | 100f51f 570f 58%7075f 50% 480f75f 54% 48bp Sb596full |>..|>...|=>....|x|=>......|>.|o>.> | YHL047C: kill: - keep: YHL047C - Not enough info. Kill () and Keep () Current total: Certain kills: 5/1443 (0.3%). Conflicting: 8/1443 (0.6%). NoInfo: 5/1443 (0.3%). Certain keep: 1425/1443 (98.8%) ########################## YHL043W (513bp = 171AA) (tdist=14.8k) has 35 hits (ECM34) involved in cell wall biogenesis Spar (test2) orthologous hit at 83% f431/444 (97.1%) over 445bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 70% f238/247 (96.4%) over 250bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 67% f143/202 (70.8%) over 207bp for offset 2 Sbay (test3) Longest island has f92 at 71% over 144bp Sbay (test2) non-orthologous hit at 70% f166/186 (89.2%) over 191bp for offset 0 Sbay (test3) Longest island has f85 at 71% over 196bp Sbay (test2) non-orthologous hit at 67% f167/188 (88.8%) over 191bp for offset 0 Sbay (test3) Longest island has f90 at 67% over 186bp Sbay (test2) non-orthologous hit at 75% f149/162 (92.0%) over 165bp for offset 1 Sbay (test3) Longest island has f97 at 75% over 153bp 0 100 200 300 400 500513 |________________|_________________|________________|_________________|________________|__| 100f 10100f92f 71% 144bp Sb206full ||===>|>|==>|oooooooooooooooooooooooo| 85f 71% 196bp Sb601full |=================================> | 90f 67% 186bp Sb606full |===============================>> | 97f 75% 153bp Sb438full |==========================>.| YHL043W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YHL043W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 5/1444 (0.3%). Conflicting: 8/1444 (0.6%). NoInfo: 5/1444 (0.3%). Certain keep: 1426/1444 (98.8%) ########################## YHL040C (1884bp = 628AA) (tdist=19.0k) has 23 hits (ARN1) Product of gene unknown Spar (test2) orthologous hit at 90% f1884/1884 (100.0%) over 1884bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1715/1715 (100.0%) over 1715bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1754/1768 (99.2%) over 1769bp for offset 0 <== THIS IS REAL YHL040C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL040C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1445 (0.3%). Conflicting: 8/1445 (0.6%). NoInfo: 5/1445 (0.3%). Certain keep: 1427/1445 (98.8%) ########################## YHL038C (1893bp = 631AA) (tdist=23.6k) has 4 hits (CBP2) Cytochrome B pre-mRNA p..ng protein (97) Spar (test2) orthologous hit at 85% f1875/1891 (99.2%) over 1893bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1871/1891 (98.9%) over 1893bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1816/1880 (96.6%) over 1893bp for offset 0 <== THIS IS REAL YHL038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1446 (0.3%). Conflicting: 8/1446 (0.6%). NoInfo: 5/1446 (0.3%). Certain keep: 1428/1446 (98.8%) ########################## YHL036W (1641bp = 547AA) (tdist=26.2k) has 4 hits (MUP3) very low affinity methi..e permease (94) Spar (test2) orthologous hit at 89% f1638/1640 (99.9%) over 1641bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1631/1638 (99.6%) over 1640bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1626/1636 (99.4%) over 1639bp for offset 0 <== THIS IS REAL YHL036W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL036W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1447 (0.3%). Conflicting: 8/1447 (0.6%). NoInfo: 5/1447 (0.3%). Certain keep: 1429/1447 (98.8%) ########################## YHL034C (885bp = 295AA) (tdist=33.1k) has 21 hits (SBP1) Single-strand nucleic a..ng protein (99) Spar (test2) orthologous hit at 93% f885/885 (100.0%) over 885bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f885/885 (100.0%) over 885bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f885/885 (100.0%) over 885bp for offset 0 <== THIS IS REAL YHL034C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL034C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1448 (0.3%). Conflicting: 8/1448 (0.6%). NoInfo: 5/1448 (0.3%). Certain keep: 1430/1448 (98.8%) ########################## YHL033C (771bp = 257AA) (tdist=35.2k) has 8 hits (RPL8A) Ribosomal protein L8A (..YL5) (L4A) (96) Spar (test2) orthologous hit at 94% f770/770 (100.0%) over 770bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f770/770 (100.0%) over 770bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f763/770 (99.1%) over 771bp for offset 0 <== THIS IS REAL YHL033C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL033C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1449 (0.3%). Conflicting: 8/1449 (0.6%). NoInfo: 5/1449 (0.3%). Certain keep: 1431/1449 (98.8%) ########################## YHL032C (2130bp = 710AA) (tdist=36.3k) has 3 hits (GUT1) glyerol kinase (convert..-phosphate (114) Spar (test2) orthologous hit at 89% f2130/2130 (100.0%) over 2130bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2123/2128 (99.8%) over 2129bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2119/2127 (99.6%) over 2129bp for offset 0 <== THIS IS REAL YHL032C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL032C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1450 (0.3%). Conflicting: 8/1450 (0.6%). NoInfo: 5/1450 (0.3%). Certain keep: 1432/1450 (98.8%) ########################## YHL031C (672bp = 224AA) (tdist=38.8k) has 6 hits (GOS1) Golgi SNARE protein Spar (test2) orthologous hit at 92% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f672/672 (100.0%) over 672bp for offset 0 <== THIS IS REAL YHL031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1451 (0.3%). Conflicting: 8/1451 (0.6%). NoInfo: 5/1451 (0.3%). Certain keep: 1433/1451 (98.8%) ########################## YHL030W (5607bp = 1869AA) (tdist=40.0k) has 25 hits (ECM29) involved in cell wal..biogenesis (92) Spar (test2) orthologous hit at 89% f5603/5606 (99.9%) over 5607bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f5564/5601 (99.3%) over 5607bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f5491/5590 (98.2%) over 5607bp for offset 0 <== THIS IS REAL YHL030W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL030W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1452 (0.3%). Conflicting: 8/1452 (0.6%). NoInfo: 5/1452 (0.3%). Certain keep: 1434/1452 (98.8%) ########################## YHL028W (1818bp = 606AA) (tdist=48.7k) has 111 hits (WSC4) Putative integral mem..2 and WSC3 (167) Spar (test2) orthologous hit at 69% f1164/1386 (84.0%) over 1415bp for offset 0 Spar (test3) Longest island has f100 at 89% over 670bp <== THIS IS REAL Smik (test2) orthologous hit at 73% f1170/1295 (90.3%) over 1323bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 65% f816/940 (86.8%) over 966bp for offset 0 Sbay (test3) Longest island has f87 at 68% over 645bp Sbay (test2) orthologous hit at 62% f629/717 (87.7%) over 730bp for offset 0 Sbay (test3) Longest island has f90 at 63% over 676bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 11k |___|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|| 78f 55% 314bp 100f 89% 670bp Sp38full |==============>......................|===============================|> 87f 68% 645bp 90f 63% 216bp Sb633brk |==============================>|==========>...> | 90f 63% 676bp Sb633brk ||================================>.> | YHL028W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YHL028W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 5/1453 (0.3%). Conflicting: 8/1453 (0.6%). NoInfo: 5/1453 (0.3%). Certain keep: 1435/1453 (98.8%) ########################## YHL027W (1878bp = 626AA) has 20 hits (RIM101) Meiotic regulatory protein; Cys-Hi..nc fingers (94) Spar (test2) orthologous hit at 83% f984/1034 (95.2%) over 1040bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 74% f1079/1193 (90.4%) over 1205bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 72% f933/1061 (87.9%) over 1079bp for offset 0 Sbay (test3) Longest island has f92 at 74% over 516bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|___|____|____|____|____|___|____|____|____|____|___|____|____|____|___| 92f 74% 516bp 99f 78% 447bp Sb882brk |========================>.....|====================| YHL027W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL027W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1454 (0.3%). Conflicting: 8/1454 (0.6%). NoInfo: 5/1454 (0.3%). Certain keep: 1436/1454 (98.8%) ########################## YHL025W (999bp = 333AA) has 48 hits (SNF6) subunit of the chromatin remodeling S..wi complex (94) Spar (test2) orthologous hit at 89% f996/999 (99.7%) over 999bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f843/881 (95.7%) over 886bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 55% f171/446 (38.3%) over 470bp for offset 1 Sbay (test3) Longest island has f73 at 61% over 70bp Sbay (test2) non-orthologous hit at 82% f155/188 (82.4%) over 188bp for offset 0 Sbay (test3) Longest island has f100 at 81% over 155bp Sbay (test2) non-orthologous hit at 60% f84/197 (42.6%) over 208bp for offset 2 Sbay (test3) Longest island has f81 at 66% over 59bp Sbay (test2) non-orthologous hit at 59% f87/194 (44.8%) over 205bp for offset 1 Sbay (test3) Longest island has f100 at 74% over 39bp 0 100 200 300 400 500 600 700 800 900 999 |________|________|________|________|________|________|________|________|________|________| 73f 61% 84f 74f 62% 39bp 82f 70% 66bp Sb553full |..|xxxxx>.|xxx|ooo>...............|ooooo>> | 100100f 81% 155bp Sb1026brk |==|ooooooooooooo> | 67f 681f 66%87f 6100f 57Sb268brk ||ooo>|xxxx>.|x>..|o> | 77f 71f100f100f 100f 53% 1Sb208full |oo>|x>|===|x>..|>> | YHL025W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YHL025W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 5/1455 (0.3%). Conflicting: 8/1455 (0.5%). NoInfo: 5/1455 (0.3%). Certain keep: 1437/1455 (98.8%) ########################## YHL024W (2142bp = 714AA) has 294 hits (RIM4) RNA-binding protein of the RRM clas..(putative) (92) Spar (test2) orthologous hit at 88% f1793/1871 (95.8%) over 1884bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1787/1810 (98.7%) over 1813bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f1140/1546 (73.7%) over 1594bp for offset 0 Sbay (test3) Longest island has f98 at 82% over 863bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k2k |___|___|___|___|____|___|___|___|___|____|___|___|___|___|____|___|___|___|___|____|___|_| 98f 82% 863bp Sb881full |................|====================================>............| YHL024W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL024W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1456 (0.3%). Conflicting: 8/1456 (0.5%). NoInfo: 5/1456 (0.3%). Certain keep: 1438/1456 (98.8%) ########################## YHL022C (1197bp = 399AA) has 4 hits (SPO11) Encodes one of the earliest meiosis-..functions. (113) Spar (test2) orthologous hit at 86% f1197/1197 (100.0%) over 1197bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1182/1184 (99.8%) over 1185bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1153/1180 (97.7%) over 1189bp for offset 0 <== THIS IS REAL YHL022C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL022C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1457 (0.3%). Conflicting: 8/1457 (0.5%). NoInfo: 5/1457 (0.3%). Certain keep: 1439/1457 (98.8%) ########################## YHL020C (1215bp = 405AA) has 555 hits (OPI1) negative regulator of phospholipid ..osynthesis (92) Spar (test2) orthologous hit at 88% f1215/1215 (100.0%) over 1215bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1181/1206 (97.9%) over 1215bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f875/886 (98.8%) over 889bp for offset 0 <== THIS IS REAL YHL020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1458 (0.3%). Conflicting: 8/1458 (0.5%). NoInfo: 5/1458 (0.3%). Certain keep: 1440/1458 (98.8%) ########################## YHL019C (1818bp = 606AA) has 133 hits (APM2) Similiar to clathrin coat proteins Spar (test2) orthologous hit at 71% f1146/1549 (74.0%) over 1601bp for offset 1 Spar (test3) Longest island has f99 at 89% over 807bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f985/1020 (96.6%) over 1026bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f985/995 (99.0%) over 1004bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 11k |___|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|| 99f 89% 807bp Sp38full |.........................................|ooooooooooooooooooooooooooooooooooooo|o> YHL019C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL019C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1459 (0.3%). Conflicting: 8/1459 (0.5%). NoInfo: 5/1459 (0.3%). Certain keep: 1441/1459 (98.8%) ########################## YHL016C (2208bp = 736AA) has 12 hits (DUR3) Urea transporter Spar (test2) orthologous hit at 91% f2208/2208 (100.0%) over 2208bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2208/2208 (100.0%) over 2208bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1929/1972 (97.8%) over 1973bp for offset 0 <== THIS IS REAL YHL016C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL016C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1460 (0.3%). Conflicting: 8/1460 (0.5%). NoInfo: 5/1460 (0.3%). Certain keep: 1442/1460 (98.8%) ########################## YHL015W (366bp = 122AA) has 78 hits (RPS20) Ribosomal protein S20 Spar (test2) orthologous hit at 98% f366/366 (100.0%) over 366bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 95% f366/366 (100.0%) over 366bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f363/363 (100.0%) over 366bp for offset 0 <== THIS IS REAL YHL015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1461 (0.3%). Conflicting: 8/1461 (0.5%). NoInfo: 5/1461 (0.3%). Certain keep: 1443/1461 (98.8%) ########################## YHL014C (1218bp = 406AA) has 17 hits (YLF2) GTP-binding protein and glycogen pho..ase (weak) (97) Spar (test2) orthologous hit at 90% f1218/1218 (100.0%) over 1218bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1212/1212 (100.0%) over 1212bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1206/1216 (99.2%) over 1218bp for offset 0 <== THIS IS REAL YHL014C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL014C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1462 (0.3%). Conflicting: 8/1462 (0.5%). NoInfo: 5/1462 (0.3%). Certain keep: 1444/1462 (98.8%) ########################## YHL011C (963bp = 321AA) has 30 hits (PRS3) ribose-phosphate pyrophosphokinase 3 Spar (test2) orthologous hit at 92% f963/963 (100.0%) over 963bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f963/963 (100.0%) over 963bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f963/963 (100.0%) over 963bp for offset 0 <== THIS IS REAL YHL011C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL011C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1463 (0.3%). Conflicting: 8/1463 (0.5%). NoInfo: 5/1463 (0.3%). Certain keep: 1445/1463 (98.8%) ########################## YHL009C (993bp = 331AA) has 49 hits (YAP3) bZip DNA binding proteins Spar (test2) orthologous hit at 83% f983/992 (99.1%) over 993bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f977/992 (98.5%) over 993bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 64% f761/946 (80.4%) over 968bp for offset 0 Sbay (test3) Longest island has f89 at 73% over 398bp 0 100 200 300 400 500 600 700 800 900 993 |________|________|________|________|________|________|________|________|________|________| 90f 62% 372bp 89f 73% 398bp Sb232full |=================================>..................|==================================|> YHL009C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YHL009C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 5/1464 (0.3%). Conflicting: 8/1464 (0.5%). NoInfo: 5/1464 (0.3%). Certain keep: 1446/1464 (98.8%) ########################## YHL007C (2820bp = 940AA) has 84 hits (STE20) serine/threonine protein kinase Spar (test2) orthologous hit at 90% f2736/2751 (99.5%) over 2754bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2803/2813 (99.6%) over 2820bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1599/2807 (57.0%) over 2820bp for offset 1 Sbay (test3) Longest island has f98 at 82% over 1632bp <== THIS IS REAL 0 100200300400500 6007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 22k |__|__|__|__|__|___|__|__|__|__|___|__|__|__|__|___|__|__|__|__|___|__|__|__|__|__|___|__|| 97f 80% 1201bp 98f 82% 1632bp Sb232full |=====================================|ooooooooooooooooooooooooooooooooooooooooooooooooooo| YHL007C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL007C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1465 (0.3%). Conflicting: 8/1465 (0.5%). NoInfo: 5/1465 (0.3%). Certain keep: 1447/1465 (98.8%) ########################## YHL006C (480bp = 160AA) has 3 hits (SHU1) suppressor of HU sensitivity Spar (test2) orthologous hit at 88% f329/480 (68.5%) over 480bp for offset 0 Spar (test3) Longest island has f100 at 89% over 329bp <== THIS IS REAL Smik (test2) orthologous hit at 81% f323/478 (67.6%) over 480bp for offset 1 Smik (test3) Longest island has f98 at 81% over 329bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 74% f333/474 (70.3%) over 477bp for offset 0 Sbay (test3) Longest island has f99 at 77% over 330bp <== THIS IS REAL 0 100 200 300 400 480 |_________________|__________________|__________________|__________________|______________| 100f 89% 329bp Sp37full |============================================================>............................| 98f 81% 329bp Sm320full |============================================================>............................| 99f 77% 330bp Sb231full |=============================================================>..........................>| YHL006C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL006C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1466 (0.3%). Conflicting: 8/1466 (0.5%). NoInfo: 5/1466 (0.3%). Certain keep: 1448/1466 (98.8%) ########################## YHL004W (1185bp = 395AA) has 4 hits (MRP4) mitochondrial ribosomal protein, homo.. ribosomes (176) Flanking ORFs are: YHL007C and YHL005C. YHL004W skipped ########################## YHL003C (1236bp = 412AA) has 15 hits (LAG1) YKL008C Spar (test2) orthologous hit at 92% f1236/1236 (100.0%) over 1236bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1233/1235 (99.8%) over 1236bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 72% f1102/1147 (96.1%) over 1154bp for offset 0 <== THIS IS REAL YHL003C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHL003C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1467 (0.3%). Conflicting: 8/1467 (0.5%). NoInfo: 5/1467 (0.3%). Certain keep: 1449/1467 (98.8%) ########################## YHR001W (1314bp = 438AA) has 9 hits (OSH7) Oxysterol Binding Protein Spar (test2) orthologous hit at 91% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1304/1312 (99.4%) over 1314bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1299/1307 (99.4%) over 1312bp for offset 0 <== THIS IS REAL YHR001W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR001W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1468 (0.3%). Conflicting: 8/1468 (0.5%). NoInfo: 5/1468 (0.3%). Certain keep: 1450/1468 (98.8%) ########################## YHR002W (1074bp = 358AA) has 10 hits (LEU5) Spar (test2) orthologous hit at 93% f1074/1074 (100.0%) over 1074bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1074/1074 (100.0%) over 1074bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1063/1072 (99.2%) over 1074bp for offset 0 <== THIS IS REAL YHR002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1469 (0.3%). Conflicting: 8/1469 (0.5%). NoInfo: 5/1469 (0.3%). Certain keep: 1451/1469 (98.8%) ########################## YHR004C (1341bp = 447AA) has 4 hits (NEM1) Nuclear Envelope Morphology Spar (test2) orthologous hit at 89% f990/1339 (73.9%) over 1341bp for offset 1 Spar (test3) Longest island has f100 at 90% over 993bp <== THIS IS REAL Smik (test2) orthologous hit at 84% f1334/1340 (99.6%) over 1341bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f771/806 (95.7%) over 813bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|______|_____|______|______|_____|______|______|______|_____|______|______|__| 100f 86% 239bp 100f 90% 993bp Sp37full |===============>......|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YHR004C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR004C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1470 (0.3%). Conflicting: 8/1470 (0.5%). NoInfo: 5/1470 (0.3%). Certain keep: 1452/1470 (98.8%) ########################## YHR005C (1419bp = 473AA) has 20 hits (GPA1) alpha subunit of G protein coupled t.. receptors (105) Spar (test2) orthologous hit at 92% f1419/1419 (100.0%) over 1419bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1415/1418 (99.8%) over 1419bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1410/1418 (99.4%) over 1419bp for offset 0 <== THIS IS REAL YHR005C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR005C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1471 (0.3%). Conflicting: 8/1471 (0.5%). NoInfo: 5/1471 (0.3%). Certain keep: 1453/1471 (98.8%) ########################## YHR005C-A (282bp = 94AA) has 11 hits (MRS11) component of mitochondrial import machinery Spar (test2) orthologous hit at 91% f282/282 (100.0%) over 282bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f281/281 (100.0%) over 281bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f282/282 (100.0%) over 282bp for offset 0 <== THIS IS REAL YHR005C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR005C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1472 (0.3%). Conflicting: 8/1472 (0.5%). NoInfo: 5/1472 (0.3%). Certain keep: 1454/1472 (98.8%) ########################## YHR006W (1626bp = 542AA) has 8 hits (STP2) Zinc finger (Cys(2)-His(2)) Spar (test2) orthologous hit at 88% f1619/1625 (99.6%) over 1626bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1601/1623 (98.6%) over 1626bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1182/1205 (98.1%) over 1209bp for offset 0 <== THIS IS REAL YHR006W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR006W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1473 (0.3%). Conflicting: 8/1473 (0.5%). NoInfo: 5/1473 (0.3%). Certain keep: 1455/1473 (98.8%) ########################## YHR007C (1593bp = 531AA) has 7 hits (ERG11) cytochrome P450 lanosterol 14a-demethylase Spar (test2) orthologous hit at 94% f1587/1592 (99.7%) over 1593bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1587/1592 (99.7%) over 1593bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1577/1591 (99.1%) over 1593bp for offset 0 <== THIS IS REAL YHR007C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR007C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1474 (0.3%). Conflicting: 8/1474 (0.5%). NoInfo: 5/1474 (0.3%). Certain keep: 1456/1474 (98.8%) ########################## YHR008C (702bp = 234AA) has 4 hits (SOD2) Manganese-containing superoxide dismutase Spar (test2) orthologous hit at 92% f702/702 (100.0%) over 702bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f702/702 (100.0%) over 702bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f702/702 (100.0%) over 702bp for offset 0 <== THIS IS REAL YHR008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1475 (0.3%). Conflicting: 8/1475 (0.5%). NoInfo: 5/1475 (0.3%). Certain keep: 1457/1475 (98.8%) ########################## YHR011W (1341bp = 447AA) has 9 hits (DIA4) involved in invasive and pseudohyphal growth Spar (test2) orthologous hit at 90% f1337/1340 (99.8%) over 1341bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1337/1340 (99.8%) over 1341bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1329/1338 (99.3%) over 1341bp for offset 0 <== THIS IS REAL YHR011W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR011W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1476 (0.3%). Conflicting: 8/1476 (0.5%). NoInfo: 5/1476 (0.3%). Certain keep: 1458/1476 (98.8%) ########################## YHR013C (717bp = 239AA) has 6 hits (ARD1) subunit of the major N alpha-acetyltra..with Nat1p (110) Spar (test2) orthologous hit at 92% f717/717 (100.0%) over 717bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f716/716 (100.0%) over 716bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f717/717 (100.0%) over 717bp for offset 0 <== THIS IS REAL YHR013C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR013C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1477 (0.3%). Conflicting: 8/1477 (0.5%). NoInfo: 5/1477 (0.3%). Certain keep: 1459/1477 (98.8%) ########################## YHR014W (876bp = 292AA) has 15 hits (SPO13) sporulation protein Spar (test2) orthologous hit at 86% f876/876 (100.0%) over 876bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f844/871 (96.9%) over 876bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f544/599 (90.8%) over 611bp for offset 2 <== THIS IS REAL YHR014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1478 (0.3%). Conflicting: 8/1478 (0.5%). NoInfo: 5/1478 (0.3%). Certain keep: 1460/1478 (98.8%) ########################## YHR015W (1980bp = 660AA) has 59 hits (MIP6) PolyA-binding protein Spar (test2) orthologous hit at 88% f1980/1980 (100.0%) over 1980bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1928/1973 (97.7%) over 1980bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1650/1872 (88.1%) over 1897bp for offset 0 Sbay (test3) Longest island has f98 at 80% over 1152bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|___|____|___|____|___|____|____|___|____|___|____|___|____|___|____|___| 98f 80% 1152bp 93f 76% 436bp Sb51full |...........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>..|xxxxxxxxxxxxxxxxxx| YHR015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1479 (0.3%). Conflicting: 8/1479 (0.5%). NoInfo: 5/1479 (0.3%). Certain keep: 1461/1479 (98.8%) ########################## YHR017W (1158bp = 386AA) has 5 hits (YSC83) similar to S. douglasii YSD83 Spar (test2) orthologous hit at 87% f1158/1158 (100.0%) over 1158bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1152/1157 (99.6%) over 1158bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1137/1150 (98.9%) over 1152bp for offset 0 <== THIS IS REAL YHR017W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR017W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1480 (0.3%). Conflicting: 8/1480 (0.5%). NoInfo: 5/1480 (0.3%). Certain keep: 1462/1480 (98.8%) ########################## YHR018C (1392bp = 464AA) has 5 hits (ARG4) argininosuccinate lyase Spar (test2) orthologous hit at 91% f1391/1391 (100.0%) over 1391bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1386/1390 (99.7%) over 1391bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1386/1392 (99.6%) over 1392bp for offset 0 <== THIS IS REAL YHR018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1481 (0.3%). Conflicting: 8/1481 (0.5%). NoInfo: 5/1481 (0.3%). Certain keep: 1463/1481 (98.8%) ########################## YHR019C (1665bp = 555AA) has 9 hits (DED81) Asparaginyl-tRNA synthetase Spar (test2) orthologous hit at 93% f1665/1665 (100.0%) over 1665bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1665/1665 (100.0%) over 1665bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1659/1664 (99.7%) over 1665bp for offset 0 <== THIS IS REAL YHR019C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR019C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1482 (0.3%). Conflicting: 8/1482 (0.5%). NoInfo: 5/1482 (0.3%). Certain keep: 1464/1482 (98.8%) ########################## YHR021W-A (456bp = 152AA) has 28 hits (ECM12) (putative) involved in cell wall biogenesis Flanking ORFs are: YHR018C and YHR020W. YHR021W-A skipped ########################## YHR023W (5787bp = 1929AA) has 212 hits (MYO1) Class II Myosin Spar (test2) orthologous hit at 88% f5777/5786 (99.8%) over 5787bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3153/3171 (99.4%) over 3178bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3493/4133 (84.5%) over 4139bp for offset 1 Sbay (test3) Longest island has f99 at 79% over 3530bp <== THIS IS REAL 0102304506708901k11k11k11k11k1k22k22k22k22k2k23k33k33k33k3k33k44k44k44k4k44k45k55k55k5k55k5k ||_||_||_||_||_|_||_||_||_||_|_||_||_||_||_|_||_||_||_||_|_||_||_||_||_|_||_||_||_||_|_||_| 99f 79% 3530bp 99f 79% 5Sb50brk ||oooooooooooooooooooooooooooooooooooooooooooooooooooooo|xxxxxxxx| YHR023W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR023W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1483 (0.3%). Conflicting: 8/1483 (0.5%). NoInfo: 5/1483 (0.3%). Certain keep: 1465/1483 (98.8%) ########################## YHR024C (1449bp = 483AA) has 7 hits (MAS2) 53 kDa subunit of the mitochondrial p..g protease (98) Spar (test2) orthologous hit at 91% f1449/1449 (100.0%) over 1449bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1441/1447 (99.6%) over 1449bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1449/1449 (100.0%) over 1449bp for offset 0 <== THIS IS REAL YHR024C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR024C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1484 (0.3%). Conflicting: 8/1484 (0.5%). NoInfo: 5/1484 (0.3%). Certain keep: 1466/1484 (98.8%) ########################## YHR025W (1074bp = 358AA) has 4 hits (THR1) homoserine kinase Spar (test2) orthologous hit at 92% f1074/1074 (100.0%) over 1074bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1074/1074 (100.0%) over 1074bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1074/1074 (100.0%) over 1074bp for offset 0 <== THIS IS REAL YHR025W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR025W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1485 (0.3%). Conflicting: 8/1485 (0.5%). NoInfo: 5/1485 (0.3%). Certain keep: 1467/1485 (98.8%) ########################## YHR026W (642bp = 214AA) has 13 hits (PPA1) vacuolar ATPase V0 domain subunit c'' Spar (test2) orthologous hit at 96% f642/642 (100.0%) over 642bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 93% f642/642 (100.0%) over 642bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 91% f642/642 (100.0%) over 642bp for offset 0 <== THIS IS REAL YHR026W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR026W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1486 (0.3%). Conflicting: 8/1486 (0.5%). NoInfo: 5/1486 (0.3%). Certain keep: 1468/1486 (98.8%) ########################## YHR027C (2982bp = 994AA) has 91 hits (RPN1) Subunit of 26S Proteasome (PA700 subunit) Spar (test2) orthologous hit at 92% f2982/2982 (100.0%) over 2982bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2978/2981 (99.9%) over 2982bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2591/2613 (99.2%) over 2614bp for offset 2 <== THIS IS REAL YHR027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1487 (0.3%). Conflicting: 8/1487 (0.5%). NoInfo: 5/1487 (0.3%). Certain keep: 1469/1487 (98.8%) ########################## YHR028C (2457bp = 819AA) has 13 hits (DAP2) Dipeptidyl aminopeptidase B (DPAP B) Spar (test2) orthologous hit at 89% f2454/2456 (99.9%) over 2457bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2452/2454 (99.9%) over 2457bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2426/2450 (99.0%) over 2457bp for offset 0 <== THIS IS REAL YHR028C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR028C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1488 (0.3%). Conflicting: 8/1488 (0.5%). NoInfo: 5/1488 (0.3%). Certain keep: 1470/1488 (98.8%) ########################## YHR030C (1455bp = 485AA) has 560 hits (SLT2) serine/threonine MAP kinase Spar (test2) orthologous hit at 91% f1163/1192 (97.6%) over 1197bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1155/1155 (100.0%) over 1158bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1173/1308 (89.7%) over 1312bp for offset 0 Sbay (test3) Longest island has f100 at 87% over 1142bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|______|_____|_____|_____|_____|______|_____|_____|_____|___| 100f 87% 1142bp Sb48full |=====================================================================>..........> | YHR030C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR030C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1489 (0.3%). Conflicting: 8/1489 (0.5%). NoInfo: 5/1489 (0.3%). Certain keep: 1471/1489 (98.8%) ########################## YHR031C (2172bp = 724AA) has 16 hits (RRM3) DNA helicase Spar (test2) orthologous hit at 90% f2172/2172 (100.0%) over 2172bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2151/2167 (99.3%) over 2172bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1161/1165 (99.7%) over 1167bp for offset 0 <== THIS IS REAL YHR031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1490 (0.3%). Conflicting: 8/1490 (0.5%). NoInfo: 5/1490 (0.3%). Certain keep: 1472/1490 (98.8%) ########################## YHR037W (1728bp = 576AA) has 5 hits (PUT2) delta-1-pyrroline-5-carboxylate dehydrogenase Spar (test2) orthologous hit at 90% f1728/1728 (100.0%) over 1728bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1727/1727 (100.0%) over 1727bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f967/972 (99.5%) over 974bp for offset 0 <== THIS IS REAL YHR037W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR037W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1491 (0.3%). Conflicting: 8/1491 (0.5%). NoInfo: 5/1491 (0.3%). Certain keep: 1473/1491 (98.8%) ########################## YHR038W (693bp = 231AA) has 30 hits (FIL1) Putative mitochondrial ribosome recyc..ing factor (91) Spar (test2) orthologous hit at 89% f693/693 (100.0%) over 693bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f684/691 (99.0%) over 693bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f686/690 (99.4%) over 693bp for offset 0 <== THIS IS REAL YHR038W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR038W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1492 (0.3%). Conflicting: 8/1492 (0.5%). NoInfo: 5/1492 (0.3%). Certain keep: 1474/1492 (98.8%) ########################## YHR039C (1935bp = 645AA) has 10 hits (MSC7) Spar (test2) orthologous hit at 92% f1934/1934 (100.0%) over 1934bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1930/1933 (99.8%) over 1934bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1931/1933 (99.9%) over 1934bp for offset 0 <== THIS IS REAL YHR039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1493 (0.3%). Conflicting: 8/1493 (0.5%). NoInfo: 5/1493 (0.3%). Certain keep: 1475/1493 (98.8%) ########################## YHR042W (2076bp = 692AA) has 5 hits (NCP1) NADP-cytochrome P450 reductase Spar (test2) orthologous hit at 92% f2075/2075 (100.0%) over 2075bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2075/2075 (100.0%) over 2075bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2076/2076 (100.0%) over 2076bp for offset 0 <== THIS IS REAL YHR042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1494 (0.3%). Conflicting: 8/1494 (0.5%). NoInfo: 5/1494 (0.3%). Certain keep: 1476/1494 (98.8%) ########################## YHR043C (741bp = 247AA) has 10 hits (DOG2) 2-deoxyglucose-6-phosphate phosphatase Spar (test2) orthologous hit at 88% f741/741 (100.0%) over 741bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f733/740 (99.1%) over 741bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f738/740 (99.7%) over 741bp for offset 0 <== THIS IS REAL YHR043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1495 (0.3%). Conflicting: 8/1495 (0.5%). NoInfo: 5/1495 (0.3%). Certain keep: 1477/1495 (98.8%) ########################## YHR044C (741bp = 247AA) has 7 hits (DOG1) 2-deoxyglucose-6-phosphate phosphatase Spar (test2) orthologous hit at 86% f734/740 (99.2%) over 741bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f723/737 (98.1%) over 738bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f724/738 (98.1%) over 741bp for offset 0 <== THIS IS REAL YHR044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1496 (0.3%). Conflicting: 8/1496 (0.5%). NoInfo: 5/1496 (0.3%). Certain keep: 1478/1496 (98.8%) ########################## YHR046C (888bp = 296AA) has 7 hits (INM1) Hypothetical ORF Spar (test2) orthologous hit at 91% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f882/887 (99.4%) over 888bp for offset 0 <== THIS IS REAL YHR046C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR046C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1497 (0.3%). Conflicting: 8/1497 (0.5%). NoInfo: 5/1497 (0.3%). Certain keep: 1479/1497 (98.8%) ########################## YHR047C (2571bp = 857AA) has 16 hits (AAP1') arginine/alanine aminopeptidase Spar (test2) orthologous hit at 87% f2560/2569 (99.6%) over 2571bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f145/145 (100.0%) over 145bp for offset 0 Smik (test3) Longest island has f100 at 83% over 145bp Sbay (test2) orthologous hit at 80% f2549/2567 (99.3%) over 2571bp for offset 0 <== THIS IS REAL 0 100 200300 400500 600700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k |__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|__| 100f 8Sm317brk |=====| YHR047C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YHR047C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 5/1498 (0.3%). Conflicting: 8/1498 (0.5%). NoInfo: 5/1498 (0.3%). Certain keep: 1480/1498 (98.8%) ########################## YHR049W (732bp = 244AA) has 7 hits (FSH1) Spar (test2) orthologous hit at 93% f732/732 (100.0%) over 732bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f732/732 (100.0%) over 732bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f732/732 (100.0%) over 732bp for offset 0 <== THIS IS REAL YHR049W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR049W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1499 (0.3%). Conflicting: 8/1499 (0.5%). NoInfo: 5/1499 (0.3%). Certain keep: 1481/1499 (98.8%) ########################## YHR050W (1650bp = 550AA) has 12 hits (SMF2) localized to mitochondrial membrane Spar (test2) orthologous hit at 89% f1648/1649 (99.9%) over 1649bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1641/1648 (99.6%) over 1650bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f1548/1561 (99.2%) over 1563bp for offset 0 <== THIS IS REAL YHR050W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR050W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1500 (0.3%). Conflicting: 8/1500 (0.5%). NoInfo: 5/1500 (0.3%). Certain keep: 1482/1500 (98.8%) ########################## YHR051W (447bp = 149AA) has 9 hits (COX6) subunit VI of cytochrome c oxidase Spar (test2) orthologous hit at 92% f444/446 (99.6%) over 447bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f447/447 (100.0%) over 447bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f236/236 (100.0%) over 236bp for offset 0 <== THIS IS REAL YHR051W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR051W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1501 (0.3%). Conflicting: 8/1501 (0.5%). NoInfo: 5/1501 (0.3%). Certain keep: 1483/1501 (98.8%) ########################## YHR052W (1131bp = 377AA) has 36 hits (CIC1) ribosome biogenesis protein Spar (test2) orthologous hit at 91% f1131/1131 (100.0%) over 1131bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1070/1075 (99.5%) over 1076bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f1115/1128 (98.8%) over 1131bp for offset 0 <== THIS IS REAL YHR052W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR052W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1502 (0.3%). Conflicting: 8/1502 (0.5%). NoInfo: 5/1502 (0.3%). Certain keep: 1484/1502 (98.8%) ########################## YHR053C (186bp = 62AA) has 29 hits (CUP1-1) copper-binding metallothionein Spar (test2) orthologous hit at 90% f180/186 (96.8%) over 186bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f178/178 (100.0%) over 178bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f180/186 (96.8%) over 186bp for offset 0 <== THIS IS REAL YHR053C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR053C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1503 (0.3%). Conflicting: 8/1503 (0.5%). NoInfo: 5/1503 (0.3%). Certain keep: 1485/1503 (98.8%) ########################## YHR055C (186bp = 62AA) has 29 hits (CUP1-2) copper-binding metallothionein Spar (test2) non-orthologous hit at 90% f180/186 (96.8%) over 186bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f178/178 (100.0%) over 178bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f180/186 (96.8%) over 186bp for offset 0 <== THIS IS REAL YHR055C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR055C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1504 (0.3%). Conflicting: 8/1504 (0.5%). NoInfo: 5/1504 (0.3%). Certain keep: 1486/1504 (98.8%) ########################## YHR056C (2499bp = 833AA) has 46 hits (RSC30) RSC complex component Spar (test2) orthologous hit at 88% f2496/2498 (99.9%) over 2499bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2465/2493 (98.9%) over 2499bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2422/2480 (97.7%) over 2499bp for offset 0 <== THIS IS REAL YHR056C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR056C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1505 (0.3%). Conflicting: 8/1505 (0.5%). NoInfo: 5/1505 (0.3%). Certain keep: 1487/1505 (98.8%) ########################## YHR057C (618bp = 206AA) has 26 hits (CPR2) Peptidylprolyl isomerase (cyclophilin..r secreted (96) Spar (test2) orthologous hit at 89% f618/618 (100.0%) over 618bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f618/618 (100.0%) over 618bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f618/618 (100.0%) over 618bp for offset 0 <== THIS IS REAL YHR057C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR057C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1506 (0.3%). Conflicting: 8/1506 (0.5%). NoInfo: 5/1506 (0.3%). Certain keep: 1488/1506 (98.8%) ########################## YHR058C (888bp = 296AA) has 6 hits (MED6) RNA polymerase II mediator subunit Spar (test2) orthologous hit at 89% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f651/654 (99.5%) over 661bp for offset 0 <== THIS IS REAL YHR058C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR058C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1507 (0.3%). Conflicting: 8/1507 (0.5%). NoInfo: 5/1507 (0.3%). Certain keep: 1489/1507 (98.8%) ########################## YHR059W (393bp = 131AA) has 8 hits (FYV4) Hypothetical ORF Spar (test2) orthologous hit at 89% f393/393 (100.0%) over 393bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f393/393 (100.0%) over 393bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f386/392 (98.5%) over 393bp for offset 0 <== THIS IS REAL YHR059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1508 (0.3%). Conflicting: 8/1508 (0.5%). NoInfo: 5/1508 (0.3%). Certain keep: 1490/1508 (98.8%) ########################## YHR060W (546bp = 182AA) has 85 hits (VMA22) vacuolar H+-ATPase assembly protein Spar (test2) orthologous hit at 89% f545/545 (100.0%) over 545bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f538/545 (98.7%) over 546bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f523/544 (96.1%) over 546bp for offset 0 <== THIS IS REAL YHR060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1509 (0.3%). Conflicting: 8/1509 (0.5%). NoInfo: 5/1509 (0.3%). Certain keep: 1491/1509 (98.8%) ########################## YHR061C (945bp = 315AA) has 10 hits (GIC1) interacts with GTPase, involved in bu.. emergence (91) Spar (test2) orthologous hit at 88% f497/497 (100.0%) over 497bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f497/497 (100.0%) over 497bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f451/468 (96.4%) over 470bp for offset 0 <== THIS IS REAL YHR061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1510 (0.3%). Conflicting: 8/1510 (0.5%). NoInfo: 5/1510 (0.3%). Certain keep: 1492/1510 (98.8%) ########################## YHR062C (882bp = 294AA) has 4 hits (RPP1) Protein subunit of nuclear ribonucleas.. (RNase P) (93) Spar (test2) orthologous hit at 92% f882/882 (100.0%) over 882bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f868/880 (98.6%) over 882bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f875/881 (99.3%) over 882bp for offset 0 <== THIS IS REAL YHR062C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR062C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1511 (0.3%). Conflicting: 8/1511 (0.5%). NoInfo: 5/1511 (0.3%). Certain keep: 1493/1511 (98.8%) ########################## YHR063C (1140bp = 380AA) has 7 hits (PAN5) ketopantoate reductase Spar (test2) orthologous hit at 91% f1140/1140 (100.0%) over 1140bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1136/1139 (99.7%) over 1140bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1105/1134 (97.4%) over 1140bp for offset 0 <== THIS IS REAL YHR063C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR063C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1512 (0.3%). Conflicting: 8/1512 (0.5%). NoInfo: 5/1512 (0.3%). Certain keep: 1494/1512 (98.8%) ########################## YHR064C (1719bp = 573AA) has 15 hits (SSZ1) Hsp70 Protein Spar (test2) orthologous hit at 92% f1670/1718 (97.2%) over 1718bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1670/1718 (97.2%) over 1719bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1650/1716 (96.2%) over 1718bp for offset 1 <== THIS IS REAL YHR064C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR064C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1513 (0.3%). Conflicting: 8/1513 (0.5%). NoInfo: 5/1513 (0.3%). Certain keep: 1495/1513 (98.8%) ########################## YHR065C (1632bp = 544AA) has 126 hits (RRP3) RRP3 is a DEAD box gene homologous ..ic for RNA (186) Spar (test2) orthologous hit at 88% f1539/1627 (94.6%) over 1631bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1557/1625 (95.8%) over 1632bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1522/1626 (93.6%) over 1632bp for offset 0 <== THIS IS REAL YHR065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1514 (0.3%). Conflicting: 8/1514 (0.5%). NoInfo: 5/1514 (0.3%). Certain keep: 1496/1514 (98.8%) ########################## YHR066W (1362bp = 454AA) has 86 hits (SSF1) homologous to Ssf2p Spar (test2) orthologous hit at 90% f1356/1361 (99.6%) over 1362bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1355/1360 (99.6%) over 1361bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1079/1266 (85.2%) over 1298bp for offset 0 Sbay (test3) Longest island has f99 at 84% over 913bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|______|_____|______|_____|______|______|_____|______|_____|____| 99f 84% 913bp Sb42full |===========================================================>........................> | YHR066W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR066W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1515 (0.3%). Conflicting: 8/1515 (0.5%). NoInfo: 5/1515 (0.3%). Certain keep: 1497/1515 (98.8%) ########################## YHR068W (1164bp = 388AA) has 6 hits (DYS1) Deoxyhypusine synthase Spar (test2) orthologous hit at 94% f1164/1164 (100.0%) over 1164bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1162/1162 (100.0%) over 1162bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f1164/1164 (100.0%) over 1164bp for offset 0 <== THIS IS REAL YHR068W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR068W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1516 (0.3%). Conflicting: 8/1516 (0.5%). NoInfo: 5/1516 (0.3%). Certain keep: 1498/1516 (98.8%) ########################## YHR069C (1080bp = 360AA) has 6 hits (RRP4) 3->5 exoribonuclease; Component of th.. (Rrp44p). (162) Spar (test2) orthologous hit at 91% f1080/1080 (100.0%) over 1080bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1080/1080 (100.0%) over 1080bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1071/1079 (99.3%) over 1080bp for offset 0 <== THIS IS REAL YHR069C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR069C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1517 (0.3%). Conflicting: 8/1517 (0.5%). NoInfo: 5/1517 (0.3%). Certain keep: 1499/1517 (98.8%) ########################## YHR070W (1500bp = 500AA) has 5 hits (TRM5) tRNA modification enzyme Spar (test2) orthologous hit at 90% f1500/1500 (100.0%) over 1500bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1495/1499 (99.7%) over 1500bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1477/1495 (98.8%) over 1500bp for offset 0 <== THIS IS REAL YHR070W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR070W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1518 (0.3%). Conflicting: 8/1518 (0.5%). NoInfo: 5/1518 (0.3%). Certain keep: 1500/1518 (98.8%) ########################## YHR071W (690bp = 230AA) has 3 hits (PCL5) G1/S cyclin (weak) Spar (test2) orthologous hit at 87% f681/688 (99.0%) over 689bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f566/589 (96.1%) over 593bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 57% f133/304 (43.8%) over 322bp for offset 2 Sbay (test3) Longest island has f90 at 55% over 58bp 0 100 200 300 400 500 600 690 |____________|____________|____________|____________|____________|____________|___________| 84f 81% 31bp81f 59% 32bp 90f 55% 85f 54% 54bp Sb573full |===>.......|xxx>..........|ooooooo|xxxxxx> | YHR071W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YHR071W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 5/1519 (0.3%). Conflicting: 8/1519 (0.5%). NoInfo: 5/1519 (0.3%). Certain keep: 1501/1519 (98.8%) ########################## YHR072W (2196bp = 732AA) has 6 hits (ERG7) 2,3-oxidosqualene-lanosterol cyclase Spar (test2) orthologous hit at 91% f2196/2196 (100.0%) over 2196bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2185/2194 (99.6%) over 2196bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1364/1367 (99.8%) over 1368bp for offset 0 <== THIS IS REAL YHR072W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR072W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1520 (0.3%). Conflicting: 8/1520 (0.5%). NoInfo: 5/1520 (0.3%). Certain keep: 1502/1520 (98.8%) ########################## YHR072W-A (177bp = 59AA) has 41 hits (NOP10) Component of H/ACA-box snoRNPs Spar (test2) orthologous hit at 94% f176/176 (100.0%) over 176bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f176/176 (100.0%) over 176bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f176/176 (100.0%) over 176bp for offset 0 <== THIS IS REAL YHR072W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR072W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1521 (0.3%). Conflicting: 8/1521 (0.5%). NoInfo: 5/1521 (0.3%). Certain keep: 1503/1521 (98.8%) ########################## YHR073W (2991bp = 997AA) has 17 hits (OSH3) Oxysterol Binding Protein Spar (test2) orthologous hit at 89% f2986/2990 (99.9%) over 2991bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1966/1988 (98.9%) over 1992bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1944/1954 (99.5%) over 1955bp for offset 0 <== THIS IS REAL YHR073W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR073W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1522 (0.3%). Conflicting: 8/1522 (0.5%). NoInfo: 5/1522 (0.3%). Certain keep: 1504/1522 (98.8%) ########################## YHR074W (2145bp = 715AA) has 6 hits (QNS1) Hypothetical ORF Spar (test2) orthologous hit at 93% f2145/2145 (100.0%) over 2145bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2145/2145 (100.0%) over 2145bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2145/2145 (100.0%) over 2145bp for offset 0 <== THIS IS REAL YHR074W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR074W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1523 (0.3%). Conflicting: 8/1523 (0.5%). NoInfo: 5/1523 (0.3%). Certain keep: 1505/1523 (98.8%) ########################## YHR075C (1203bp = 401AA) has 7 hits (PPE1) carboxyl methyl esterase Spar (test2) orthologous hit at 89% f1190/1198 (99.3%) over 1203bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1178/1199 (98.2%) over 1203bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1177/1198 (98.2%) over 1202bp for offset 0 <== THIS IS REAL YHR075C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR075C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1524 (0.3%). Conflicting: 8/1524 (0.5%). NoInfo: 5/1524 (0.3%). Certain keep: 1506/1524 (98.8%) ########################## YHR079C (3348bp = 1116AA) has 22 hits (IRE1) Ire1p is a transmembrane protein th..activities (147) Spar (test2) orthologous hit at 89% f3348/3348 (100.0%) over 3348bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3313/3337 (99.3%) over 3348bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f3290/3339 (98.5%) over 3348bp for offset 0 <== THIS IS REAL YHR079C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR079C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1525 (0.3%). Conflicting: 8/1525 (0.5%). NoInfo: 5/1525 (0.3%). Certain keep: 1507/1525 (98.8%) ########################## YHR079C-A (153bp = 51AA) has 159 hits (SAE3) involved in meiotic recombination a..metabolism (104) Spar (test2) orthologous hit at 81% f129/146 (88.4%) over 149bp for offset 0 Spar (test3) Longest island has f100 at 84% over 129bp <== THIS IS REAL Smik (test2) orthologous hit at 75% f117/126 (92.9%) over 127bp for offset 0 Smik (test3) Longest island has f91 at 75% over 128bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 59% f63/136 (46.3%) over 143bp for offset 0 Sbay (test3) Longest island has f76 at 42% over 33bp Sbay (test2) non-orthologous hit at 59% f98/138 (71.0%) over 139bp for offset 1 Sbay (test3) Longest island has f85 at 64% over 66bp Sbay (test2) non-orthologous hit at 60% f49/124 (39.5%) over 131bp for offset 1 Sbay (test3) Longest island has f80 at 59% over 46bp Sbay (test2) non-orthologous hit at 62% f55/117 (47.0%) over 124bp for offset 1 Sbay (test3) Longest island has f82 at 59% over 56bp 0 100 153 |_________________________________________________________|_______________________________| 100f 84% 129bp 85f 70% 20bp Sp36full ||==========================================================================>|oooooooooo> | 91f 75% 128bp Sm313full ||=========================================================================> | 100f 58% 24bp 76f 42% 33bp 100f 75% 20b100f 56% 16bp Sb749full |.............|=============>.....|xxxxxxxxxxxxxxxxx>.|oooooooooo>|========>........| 100f 54%100f 71% 17bp 85f 64% 66bp 100f 56% 2Sb970full ||======>|oooooooo>.....|ooooooooooooooooooooooooooooooooooooo>..........|ooooooooo|ooo> 87f 60% 30bp 80f 59% 46bp 100f 65% 37bp 100f 7Sb36full ||================>|ooooooooooooooooooooooooo>.....|xxxxxxxxxxxxxxxxxxxx>.|ooooo| 82f 58% 38bp 82f 59% 56bp Sb514full |......|xxxxxxxxxxxxxxxxxxxxx>.....|===============================>.....> | YHR079C-A: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YHR079C-A - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 5/1526 (0.3%). Conflicting: 8/1526 (0.5%). NoInfo: 5/1526 (0.3%). Certain keep: 1508/1526 (98.8%) ########################## YHR082C (3090bp = 1030AA) has 297 hits (KSP1) Ser/Thr protein kinase Spar (test2) orthologous hit at 89% f1721/1744 (98.7%) over 1749bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2153/2229 (96.6%) over 2251bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f1121/1419 (79.0%) over 1424bp for offset 0 Sbay (test3) Longest island has f97 at 80% over 1154bp <== THIS IS REAL 0 1002003004005006007008009001k 1k1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k2k 2k 2k 2k 2k 2k 2k 3k 3k |_|__|__|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__|__|__|_|__|__|__|__|__|__|__|__| 100f 84%97f 80% 1154bp Sb189brk |=======|ooooooooooooooooooooooooooooooooo> | YHR082C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR082C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1527 (0.3%). Conflicting: 8/1527 (0.5%). NoInfo: 5/1527 (0.3%). Certain keep: 1509/1527 (98.8%) ########################## YHR084W (2067bp = 689AA) has 9 hits (STE12) Transcription factor Spar (test2) orthologous hit at 90% f2067/2067 (100.0%) over 2067bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2037/2062 (98.8%) over 2067bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2013/2036 (98.9%) over 2046bp for offset 0 <== THIS IS REAL YHR084W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR084W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1528 (0.3%). Conflicting: 8/1528 (0.5%). NoInfo: 5/1528 (0.3%). Certain keep: 1510/1528 (98.8%) ########################## YHR086W (1572bp = 524AA) has 16 hits (NAM8) putative RNA binding protein, involv..r1 protein (174) Spar (test2) orthologous hit at 89% f1572/1572 (100.0%) over 1572bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1557/1569 (99.2%) over 1572bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f629/632 (99.5%) over 633bp for offset 0 <== THIS IS REAL YHR086W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR086W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1529 (0.3%). Conflicting: 8/1529 (0.5%). NoInfo: 5/1529 (0.3%). Certain keep: 1511/1529 (98.8%) ########################## YHR088W (888bp = 296AA) has 19 hits (RPF1) Spar (test2) orthologous hit at 92% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f887/887 (100.0%) over 887bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL YHR088W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR088W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1530 (0.3%). Conflicting: 8/1530 (0.5%). NoInfo: 5/1530 (0.3%). Certain keep: 1512/1530 (98.8%) ########################## YHR089C (618bp = 206AA) has 44 hits (GAR1) small nucleolar RNP proteins Spar (test2) orthologous hit at 92% f461/575 (80.2%) over 575bp for offset 0 Spar (test3) Longest island has f100 at 95% over 460bp <== THIS IS REAL Smik (test2) orthologous hit at 91% f257/288 (89.2%) over 290bp for offset 2 Smik (test3) Longest island has f100 at 92% over 257bp Smik (test2) orthologous hit at 85% f208/211 (98.6%) over 212bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f593/605 (98.0%) over 615bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600618 |_____________|______________|_____________|______________|_____________|______________|__| 100f 95% 460bp Sp34brk |==================================================================>...............> | 100f 92% 257bp Sm1447brk |====================================>....> | YHR089C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR089C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1531 (0.3%). Conflicting: 8/1531 (0.5%). NoInfo: 5/1531 (0.3%). Certain keep: 1513/1531 (98.8%) ########################## YHR090C (849bp = 283AA) has 14 hits (YNG2) NuA4 histone acetyltransferase comple.. component (91) Spar (test2) orthologous hit at 89% f849/849 (100.0%) over 849bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f835/846 (98.7%) over 847bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f849/849 (100.0%) over 849bp for offset 0 <== THIS IS REAL YHR090C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR090C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1532 (0.3%). Conflicting: 8/1532 (0.5%). NoInfo: 5/1532 (0.3%). Certain keep: 1514/1532 (98.8%) ########################## YHR091C (1932bp = 644AA) has 12 hits (MSR1) Arginyl-tRNA synthetase Spar (test2) orthologous hit at 87% f1922/1931 (99.5%) over 1932bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f1908/1929 (98.9%) over 1932bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1881/1920 (98.0%) over 1932bp for offset 0 <== THIS IS REAL YHR091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1533 (0.3%). Conflicting: 8/1533 (0.5%). NoInfo: 5/1533 (0.3%). Certain keep: 1515/1533 (98.8%) ########################## YHR092C (1683bp = 561AA) has 120 hits (HXT4) High-affinity glucose transporter Spar (test2) orthologous hit at 93% f1638/1683 (97.3%) over 1683bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1020/1064 (95.9%) over 1064bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1582/1652 (95.8%) over 1655bp for offset 1 <== THIS IS REAL YHR092C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR092C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 5/1534 (0.3%). Conflicting: 8/1534 (0.5%). NoInfo: 5/1534 (0.3%). Certain keep: 1516/1534 (98.8%) ########################## YHR093W (549bp = 183AA) has 4 hits (AHT1) the AHT1 DNA sequence is upstream of H..tional ORF (213) Spar (test2) orthologous hit at 90% f363/547 (66.4%) over 549bp for offset 2 Spar (test3) Longest island has f100 at 90% over 191bp Smik (test2) non-orthologous hit at 81% f306/539 (56.8%) over 548bp for offset 1 Smik (test3) Longest island has f98 at 86% over 189bp Sbay (test2) orthologous hit at 76% f315/534 (59.0%) over 546bp for offset 0 Sbay (test3) Longest island has f100 at 80% over 136bp 0 100 200 300 400 500 549 |_______________|_______________|________________|_______________|_______________|________| 100f 90% 191bp 90f 91% 138bp 100f 95% 172bp 100f 90%Sp34full |==============================|oooooooooooooooooooooo|===========================|oooo>..| 92f 83% 92bp 100f 72% 39100f 90% 77bp98f 86% 189bp Sm311full |..|oooooooooooooo>........|=====>....|===========>|oooooooooooooooooooooooooooooo>......>| 100f 80% 136bp 97f 81% 114bp 100f 85100f 73% 59bp Sb187full |=====================>.....|==================>.........|=====>|xxxxxxxx>...............>| YHR093W: kill: Spar - keep: YHR093W - Certain Kill. Kill (Spar) and Keep () Current total: Certain kills: 6/1535 (0.4%). Conflicting: 8/1535 (0.5%). NoInfo: 5/1535 (0.3%). Certain keep: 1516/1535 (98.8%) ########################## YHR094C (1713bp = 571AA) has 110 hits (HXT1) High-affinity hexose (glucose) transporter Spar (test2) orthologous hit at 93% f1700/1711 (99.4%) over 1713bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 77% f1557/1616 (96.3%) over 1624bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1515/1515 (100.0%) over 1515bp for offset 0 <== THIS IS REAL YHR094C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR094C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1536 (0.4%). Conflicting: 8/1536 (0.5%). NoInfo: 5/1536 (0.3%). Certain keep: 1517/1536 (98.8%) ########################## YHR096C (1779bp = 593AA) has 100 hits (HXT5) hexose transporter Spar (test2) non-orthologous hit at 92% f1779/1779 (100.0%) over 1779bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1779/1779 (100.0%) over 1779bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1764/1777 (99.3%) over 1779bp for offset 0 <== THIS IS REAL YHR096C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR096C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1537 (0.4%). Conflicting: 8/1537 (0.5%). NoInfo: 5/1537 (0.3%). Certain keep: 1518/1537 (98.8%) ########################## YHR098C (2790bp = 930AA) has 13 hits (SFB3) binds to Sed5p and Sec23p by distinct domains Spar (test2) orthologous hit at 91% f2785/2789 (99.9%) over 2790bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1817/1817 (100.0%) over 1817bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f2573/2581 (99.7%) over 2586bp for offset 0 <== THIS IS REAL YHR098C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR098C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1538 (0.4%). Conflicting: 8/1538 (0.5%). NoInfo: 5/1538 (0.3%). Certain keep: 1519/1538 (98.8%) ########################## YHR099W (11235bp = 3745AA) has 44 hits (TRA1) ATM/Mec1/TOR1+2-related Spar (test2) orthologous hit at 90% f11214/11232 (99.8%) over 11235bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f4709/4720 (99.8%) over 4721bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f6757/6778 (99.7%) over 6785bp for offset 0 <== THIS IS REAL YHR099W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR099W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1539 (0.4%). Conflicting: 8/1539 (0.5%). NoInfo: 5/1539 (0.3%). Certain keep: 1520/1539 (98.8%) ########################## YHR102W (3243bp = 1081AA) has 74 hits (KIC1) PAK/Ste20 kinase family Spar (test2) orthologous hit at 89% f2068/2093 (98.8%) over 2095bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1720/1723 (99.8%) over 1723bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2058/2102 (97.9%) over 2115bp for offset 0 <== THIS IS REAL YHR102W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR102W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1540 (0.4%). Conflicting: 8/1540 (0.5%). NoInfo: 5/1540 (0.3%). Certain keep: 1521/1540 (98.8%) ########################## YHR103W (2559bp = 853AA) has 26 hits (SBE22) involved in bud growth Spar (test2) orthologous hit at 89% f2559/2559 (100.0%) over 2559bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1795/1795 (100.0%) over 1795bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2516/2547 (98.8%) over 2559bp for offset 0 <== THIS IS REAL YHR103W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR103W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1541 (0.4%). Conflicting: 8/1541 (0.5%). NoInfo: 5/1541 (0.3%). Certain keep: 1522/1541 (98.8%) ########################## YHR104W (984bp = 328AA) has 10 hits (GRE3) a keto-aldose reductase Spar (test2) orthologous hit at 91% f984/984 (100.0%) over 984bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f984/984 (100.0%) over 984bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f977/983 (99.4%) over 984bp for offset 0 <== THIS IS REAL YHR104W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR104W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1542 (0.4%). Conflicting: 8/1542 (0.5%). NoInfo: 5/1542 (0.3%). Certain keep: 1523/1542 (98.8%) ########################## YHR106W (1029bp = 343AA) has 10 hits (TRR2) mitochondrial thioredoxin reductase Spar (test2) orthologous hit at 91% f1029/1029 (100.0%) over 1029bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1029/1029 (100.0%) over 1029bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1026/1026 (100.0%) over 1029bp for offset 0 <== THIS IS REAL YHR106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1543 (0.4%). Conflicting: 8/1543 (0.5%). NoInfo: 5/1543 (0.3%). Certain keep: 1524/1543 (98.8%) ########################## YHR107C (1224bp = 408AA) has 21 hits (CDC12) Component of 10 nm filaments of mot..k (septin) (101) Spar (test2) orthologous hit at 91% f1224/1224 (100.0%) over 1224bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1224/1224 (100.0%) over 1224bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1224/1224 (100.0%) over 1224bp for offset 0 <== THIS IS REAL YHR107C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR107C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1544 (0.4%). Conflicting: 8/1544 (0.5%). NoInfo: 5/1544 (0.3%). Certain keep: 1525/1544 (98.8%) ########################## YHR108W (1758bp = 586AA) has 13 hits (GGA2) Arf-binding protein Spar (test2) orthologous hit at 90% f1754/1757 (99.8%) over 1758bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1758/1758 (100.0%) over 1758bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1735/1751 (99.1%) over 1757bp for offset 0 <== THIS IS REAL YHR108W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR108W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1545 (0.4%). Conflicting: 8/1545 (0.5%). NoInfo: 5/1545 (0.3%). Certain keep: 1526/1545 (98.8%) ########################## YHR109W (1758bp = 586AA) has 8 hits (CTM1) Cytochrome c methyltransferase Spar (test2) orthologous hit at 85% f1743/1755 (99.3%) over 1758bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1727/1754 (98.5%) over 1758bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1685/1745 (96.6%) over 1758bp for offset 0 <== THIS IS REAL YHR109W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR109W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1546 (0.4%). Conflicting: 8/1546 (0.5%). NoInfo: 5/1546 (0.3%). Certain keep: 1527/1546 (98.8%) ########################## YHR110W (639bp = 213AA) has 7 hits (ERP5) p24 protein involved in membrane trafficking Spar (test2) orthologous hit at 87% f639/639 (100.0%) over 639bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f633/637 (99.4%) over 638bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f626/635 (98.6%) over 638bp for offset 0 <== THIS IS REAL YHR110W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR110W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1547 (0.4%). Conflicting: 8/1547 (0.5%). NoInfo: 5/1547 (0.3%). Certain keep: 1528/1547 (98.8%) ########################## YHR114W (1902bp = 634AA) has 27 hits (BZZ1) Myo3/5p-Bee1p-Vrp1p actin assembly c.. component (96) Spar (test2) orthologous hit at 90% f1902/1902 (100.0%) over 1902bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1902/1902 (100.0%) over 1902bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1892/1900 (99.6%) over 1902bp for offset 0 <== THIS IS REAL YHR114W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR114W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1548 (0.4%). Conflicting: 8/1548 (0.5%). NoInfo: 5/1548 (0.3%). Certain keep: 1529/1548 (98.8%) ########################## YHR117W (1920bp = 640AA) has 43 hits (TOM71) 71-kDa component of the protein tra..tochondria (126) Spar (test2) orthologous hit at 86% f1807/1841 (98.2%) over 1850bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1673/1681 (99.5%) over 1686bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1828/1871 (97.7%) over 1882bp for offset 0 <== THIS IS REAL YHR117W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR117W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1549 (0.4%). Conflicting: 8/1549 (0.5%). NoInfo: 5/1549 (0.3%). Certain keep: 1530/1549 (98.8%) ########################## YHR118C (1308bp = 436AA) has 30 hits (ORC6) 50-kDa subunit of ORC Spar (test2) orthologous hit at 89% f1124/1133 (99.2%) over 1137bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1303/1305 (99.8%) over 1308bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1294/1300 (99.5%) over 1307bp for offset 0 <== THIS IS REAL YHR118C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR118C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1550 (0.4%). Conflicting: 8/1550 (0.5%). NoInfo: 5/1550 (0.3%). Certain keep: 1531/1550 (98.8%) ########################## YHR119W (3243bp = 1081AA) has 36 hits (SET1) trithorax Spar (test2) orthologous hit at 89% f2617/3241 (80.7%) over 3243bp for offset 2 Spar (test3) Longest island has f100 at 88% over 2626bp <== THIS IS REAL Smik (test2) orthologous hit at 83% f3234/3240 (99.8%) over 3243bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1133/1225 (92.5%) over 1232bp for offset 0 <== THIS IS REAL 0 10020030040500600700809001k 1k 1k 1k1k 1k 1k 1k1k 1k 2k 2k 2k2k 2k 2k 2k2k 2k 2k 3k 3k3k3k |_|__|__|__|_|__|__|__|_|__|__|__|__|_|__|__|__|_|__|__|__|__|_|__|__|__|_|__|__|__|__|_|_| 100f 88% 2626bp 100f 93% 620bp Sp33full |=======================================================================|xxxxxxxxxxxxxxxxx| YHR119W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR119W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1551 (0.4%). Conflicting: 8/1551 (0.5%). NoInfo: 5/1551 (0.3%). Certain keep: 1532/1551 (98.8%) ########################## YHR120W (2880bp = 960AA) has 32 hits (MSH1) mutS homolog involved in mitochondri..DNA repair (93) Spar (test2) orthologous hit at 89% f2869/2877 (99.7%) over 2880bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2861/2877 (99.4%) over 2880bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2831/2866 (98.8%) over 2880bp for offset 0 <== THIS IS REAL YHR120W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR120W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1552 (0.4%). Conflicting: 8/1552 (0.5%). NoInfo: 5/1552 (0.3%). Certain keep: 1533/1552 (98.8%) ########################## YHR124W (1884bp = 628AA) has 7 hits (NDT80) DNA-binding transcription factor tha..tion genes (116) Spar (test2) orthologous hit at 90% f1884/1884 (100.0%) over 1884bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1812/1882 (96.3%) over 1884bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1870/1882 (99.4%) over 1884bp for offset 0 <== THIS IS REAL YHR124W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR124W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1553 (0.4%). Conflicting: 8/1553 (0.5%). NoInfo: 5/1553 (0.3%). Certain keep: 1534/1553 (98.8%) ########################## YHR128W (756bp = 252AA) has 5 hits (FUR1) UPRTase Spar (test2) orthologous hit at 91% f740/752 (98.4%) over 753bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f682/752 (90.7%) over 753bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f720/752 (95.7%) over 753bp for offset 0 <== THIS IS REAL YHR128W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR128W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1554 (0.4%). Conflicting: 8/1554 (0.5%). NoInfo: 5/1554 (0.3%). Certain keep: 1535/1554 (98.8%) ########################## YHR129C (1155bp = 385AA) has 10 hits (ARP1) Centractin Spar (test2) orthologous hit at 90% f1151/1153 (99.8%) over 1154bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1154/1154 (100.0%) over 1154bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1142/1152 (99.1%) over 1154bp for offset 0 <== THIS IS REAL YHR129C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR129C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1555 (0.4%). Conflicting: 8/1555 (0.5%). NoInfo: 5/1555 (0.3%). Certain keep: 1536/1555 (98.8%) ########################## YHR132C (1293bp = 431AA) has 6 hits (ECM14) Carboxypeptidase Spar (test2) orthologous hit at 90% f1293/1293 (100.0%) over 1293bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1282/1291 (99.3%) over 1292bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1285/1292 (99.5%) over 1293bp for offset 0 <== THIS IS REAL YHR132C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR132C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1556 (0.4%). Conflicting: 8/1556 (0.5%). NoInfo: 5/1556 (0.3%). Certain keep: 1537/1556 (98.8%) ########################## YHR134W (810bp = 270AA) has 5 hits (WSS1) weak suppressor of smt3 Spar (test2) orthologous hit at 86% f777/810 (95.9%) over 810bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f779/808 (96.4%) over 809bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 74% f644/680 (94.7%) over 689bp for offset 0 <== THIS IS REAL YHR134W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR134W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1557 (0.4%). Conflicting: 8/1557 (0.5%). NoInfo: 5/1557 (0.3%). Certain keep: 1538/1557 (98.8%) ########################## YHR135C (1617bp = 539AA) has 553 hits (YCK1) membrane-bound casein kinase I homolog Spar (test2) orthologous hit at 86% f1405/1462 (96.1%) over 1469bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1333/1400 (95.2%) over 1411bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1084/1489 (72.8%) over 1506bp for offset 0 Sbay (test3) Longest island has f100 at 83% over 922bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 11k |____|_____|____|_____|____|_____|____|_____|_____|____|_____|____|_____|____|_____|_____|| 100f 77% 273bp 100f 83% 922bp Sb182full |.|==============|ooooooooooooooooooooooooooooooooooooooooooooooooooo>..............> | YHR135C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR135C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1558 (0.4%). Conflicting: 8/1558 (0.5%). NoInfo: 5/1558 (0.3%). Certain keep: 1539/1558 (98.8%) ########################## YHR136C (447bp = 149AA) has 4 hits (SPL2) 17 kDa protein Spar (test2) orthologous hit at 83% f369/447 (82.6%) over 447bp for offset 2 Spar (test3) Longest island has f98 at 85% over 376bp <== THIS IS REAL Smik (test2) orthologous hit at 72% f365/438 (83.3%) over 442bp for offset 0 Smik (test3) Longest island has f95 at 75% over 358bp <== THIS IS REAL Sbay (test2) orthologous hit at 66% f357/433 (82.4%) over 442bp for offset 0 Sbay (test3) Longest island has f94 at 72% over 307bp <== THIS IS REAL 0 100 200 300 400 447 |___________________|___________________|___________________|___________________|_________| 98f 85% 376bp Sp32full |..............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> 95f 75% 358bp Sm665full |.................|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo|> 100f 55% 62bp 82f 59%94f 72% 307bp Sb181full |...|xxxxxxxxxxxx>....|===>..|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YHR136C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR136C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1559 (0.4%). Conflicting: 8/1559 (0.5%). NoInfo: 5/1559 (0.3%). Certain keep: 1540/1559 (98.8%) ########################## YHR137W (1542bp = 514AA) has 9 hits (ARO9) aromatic amino acid aminotransferase II Spar (test2) orthologous hit at 90% f1532/1540 (99.5%) over 1542bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1542/1542 (100.0%) over 1542bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1509/1531 (98.6%) over 1535bp for offset 0 <== THIS IS REAL YHR137W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR137W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1560 (0.4%). Conflicting: 8/1560 (0.5%). NoInfo: 5/1560 (0.3%). Certain keep: 1541/1560 (98.8%) ########################## YHR139C (981bp = 327AA) has 10 hits (SPS100) sporulation-specific wall maturation protein Spar (test2) orthologous hit at 89% f980/981 (99.9%) over 981bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f981/981 (100.0%) over 981bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f501/501 (100.0%) over 504bp for offset 0 <== THIS IS REAL YHR139C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR139C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1561 (0.4%). Conflicting: 8/1561 (0.5%). NoInfo: 5/1561 (0.3%). Certain keep: 1542/1561 (98.8%) ########################## YHR142W (951bp = 317AA) has 5 hits (CHS7) The seventh gene identified that is in..rom the ER (144) Spar (test2) orthologous hit at 90% f951/951 (100.0%) over 951bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f951/951 (100.0%) over 951bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f951/951 (100.0%) over 951bp for offset 0 <== THIS IS REAL YHR142W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR142W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1562 (0.4%). Conflicting: 8/1562 (0.5%). NoInfo: 5/1562 (0.3%). Certain keep: 1543/1562 (98.8%) ########################## YHR143W (978bp = 326AA) has 548 hits (DSE2) Daugher Specific Expression 2 Spar (test2) orthologous hit at 72% f741/846 (87.6%) over 863bp for offset 2 Spar (test3) Longest island has f97 at 81% over 619bp <== THIS IS REAL Smik (test2) orthologous hit at 79% f948/974 (97.3%) over 978bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 64% f642/908 (70.7%) over 940bp for offset 0 Sbay (test3) Longest island has f93 at 77% over 388bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 978 |________|________|________|________|_________|________|________|________|________|_______| 97f 81% 619bp Sp32full |========================================================>.....................> | 93f 77% 388bp Sb181full |==================================>..................................................> | YHR143W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR143W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1563 (0.4%). Conflicting: 8/1563 (0.5%). NoInfo: 5/1563 (0.3%). Certain keep: 1544/1563 (98.8%) ########################## YHR143W-A (213bp = 71AA) has 16 hits (RPC10) subunit of RNA polymerase II Spar (test2) orthologous hit at 93% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL YHR143W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR143W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1564 (0.4%). Conflicting: 8/1564 (0.5%). NoInfo: 5/1564 (0.3%). Certain keep: 1545/1564 (98.8%) ########################## YHR144C (939bp = 313AA) has 10 hits (DCD1) dCMP deaminase Spar (test2) orthologous hit at 89% f934/938 (99.6%) over 939bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f934/938 (99.6%) over 939bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f487/487 (100.0%) over 487bp for offset 0 <== THIS IS REAL YHR144C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR144C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1565 (0.4%). Conflicting: 8/1565 (0.5%). NoInfo: 5/1565 (0.3%). Certain keep: 1546/1565 (98.8%) ########################## YHR146W (1398bp = 466AA) has 51 hits (CRP1) Hypothetical ORF Spar (test2) orthologous hit at 80% f1002/1023 (97.9%) over 1027bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 66% f1034/1251 (82.7%) over 1279bp for offset 0 Smik (test3) Longest island has f96 at 79% over 530bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 68% f851/936 (90.9%) over 951bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|_____|______|_____|______|_____|______|_____|_____|______|_____|______|_____|______| 96f 79% 530bp 95f 66% 277bp Sm664brk |=================================>...............|=================>.............> | YHR146W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR146W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1566 (0.4%). Conflicting: 8/1566 (0.5%). NoInfo: 5/1566 (0.3%). Certain keep: 1547/1566 (98.8%) ########################## YHR147C (645bp = 215AA) has 5 hits (MRPL6) Mitochondrial ribosomal protein MRPL6 (YmL6) Spar (test2) orthologous hit at 91% f645/645 (100.0%) over 645bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f644/644 (100.0%) over 644bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f641/644 (99.5%) over 645bp for offset 0 <== THIS IS REAL YHR147C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR147C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1567 (0.4%). Conflicting: 8/1567 (0.5%). NoInfo: 5/1567 (0.3%). Certain keep: 1548/1567 (98.8%) ########################## YHR148W (552bp = 184AA) has 7 hits (IMP3) ribosomal protein (weak similarity) Spar (test2) orthologous hit at 94% f552/552 (100.0%) over 552bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f544/550 (98.9%) over 551bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f329/382 (86.1%) over 382bp for offset 0 Sbay (test3) Longest island has f100 at 85% over 329bp <== THIS IS REAL 0 100 200 300 400 500 552 |_______________|_______________|_______________|________________|_______________|________| 100f 85% 329bp Sb179brk |====================================================>........> | YHR148W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR148W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1568 (0.4%). Conflicting: 8/1568 (0.5%). NoInfo: 5/1568 (0.3%). Certain keep: 1549/1568 (98.8%) ########################## YHR152W (522bp = 174AA) has 119 hits (SPO12) 20 kDa protein with negatively char..n kinases. (253) Spar (test2) orthologous hit at 84% f468/514 (91.1%) over 517bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f471/517 (91.1%) over 521bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f506/512 (98.8%) over 521bp for offset 0 <== THIS IS REAL YHR152W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR152W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1569 (0.4%). Conflicting: 8/1569 (0.5%). NoInfo: 5/1569 (0.3%). Certain keep: 1550/1569 (98.8%) ########################## YHR153C (597bp = 199AA) has 6 hits (SPO16) sporulation protein Spar (test2) orthologous hit at 85% f594/596 (99.7%) over 597bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f581/594 (97.8%) over 596bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f569/594 (95.8%) over 597bp for offset 0 <== THIS IS REAL YHR153C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR153C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1570 (0.4%). Conflicting: 8/1570 (0.5%). NoInfo: 5/1570 (0.3%). Certain keep: 1551/1570 (98.8%) ########################## YHR154W (3213bp = 1071AA) has 81 hits (RTT107) involved in silencing Spar (test2) orthologous hit at 88% f1551/1569 (98.9%) over 1571bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 73% f1751/2176 (80.5%) over 2221bp for offset 0 Smik (test3) Longest island has f99 at 83% over 1549bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1064/1076 (98.9%) over 1079bp for offset 0 <== THIS IS REAL 0 100200300400506007008009001k1k 1k 1k 1k 1k1k 1k 1k 1k 2k2k 2k 2k 2k 2k2k 2k 2k 2k 3k3k 33k |_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|| 99f 83% 1549bp Sm663full |==========================================>..................> | YHR154W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR154W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1571 (0.4%). Conflicting: 8/1571 (0.5%). NoInfo: 5/1571 (0.3%). Certain keep: 1552/1571 (98.8%) ########################## YHR156C (1023bp = 341AA) has 50 hits (LIN1) Hypothetical ORF Spar (test2) orthologous hit at 79% f900/991 (90.8%) over 1007bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 75% f857/949 (90.3%) over 963bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f795/840 (94.6%) over 846bp for offset 0 <== THIS IS REAL YHR156C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR156C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1572 (0.4%). Conflicting: 8/1572 (0.5%). NoInfo: 5/1572 (0.3%). Certain keep: 1553/1572 (98.8%) ########################## YHR157W (549bp = 183AA) has 7 hits (REC104) mRNA is induced early in meiosis Spar (test2) orthologous hit at 83% f549/549 (100.0%) over 549bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f533/546 (97.6%) over 549bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f375/387 (96.9%) over 392bp for offset 0 <== THIS IS REAL YHR157W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR157W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1573 (0.4%). Conflicting: 8/1573 (0.5%). NoInfo: 5/1573 (0.3%). Certain keep: 1554/1573 (98.8%) ########################## YHR158C (3495bp = 1165AA) has 53 hits (KEL1) involved in cell fusion and morphol..ch repeats (111) Spar (test2) orthologous hit at 88% f2204/2225 (99.1%) over 2230bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2876/2896 (99.3%) over 2902bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f2376/2717 (87.4%) over 2767bp for offset 0 Sbay (test3) Longest island has f97 at 78% over 2242bp <== THIS IS REAL 0 100203004050060070800901k 1k1k 1k 1k1k 1k1k 1k1k 2k 2k2k 2k2k 2k2k 2k 2k2k 3k3k 3k3k 3k 3k |_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__| 97f 78% 2242bp Sb175full |========================================================>.............> | YHR158C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR158C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1574 (0.4%). Conflicting: 8/1574 (0.5%). NoInfo: 5/1574 (0.3%). Certain keep: 1555/1574 (98.8%) ########################## YHR160C (852bp = 284AA) has 4 hits (PEX18) Peroxin Pex18p Spar (test2) orthologous hit at 81% f846/850 (99.5%) over 851bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f825/845 (97.6%) over 848bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 66% f782/841 (93.0%) over 851bp for offset 0 <== THIS IS REAL YHR160C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR160C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1575 (0.4%). Conflicting: 8/1575 (0.5%). NoInfo: 5/1575 (0.3%). Certain keep: 1556/1575 (98.8%) ########################## YHR161C (1914bp = 638AA) has 503 hits (YAP1801) clathrin assembly protein Spar (test2) orthologous hit at 83% f1753/1852 (94.7%) over 1864bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1738/1894 (91.8%) over 1913bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1439/1478 (97.4%) over 1482bp for offset 1 <== THIS IS REAL YHR161C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR161C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1576 (0.4%). Conflicting: 8/1576 (0.5%). NoInfo: 5/1576 (0.3%). Certain keep: 1557/1576 (98.8%) ########################## YHR163W (843bp = 281AA) has 6 hits (SOL3) shows similarity to glucose-6-phosphat.. and Sol1p (148) Spar (test2) orthologous hit at 86% f799/833 (95.9%) over 836bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f745/832 (89.5%) over 835bp for offset 2 Smik (test3) Longest island has f99 at 84% over 753bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f726/823 (88.2%) over 829bp for offset 2 Sbay (test3) Longest island has f96 at 80% over 755bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 843 |_________|__________|__________|_________|__________|__________|_________|__________|____| 99f 84% 753bp Sm663full |.........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 96f 80% 755bp Sb175full |........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YHR163W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR163W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1577 (0.4%). Conflicting: 8/1577 (0.5%). NoInfo: 5/1577 (0.3%). Certain keep: 1558/1577 (98.8%) ########################## YHR164C (4569bp = 1523AA) has 41 hits (DNA2) DNA replication helicase Spar (test2) orthologous hit at 88% f4541/4564 (99.5%) over 4569bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f3786/3830 (98.9%) over 3836bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3579/3619 (98.9%) over 3630bp for offset 0 <== THIS IS REAL YHR164C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR164C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1578 (0.4%). Conflicting: 8/1578 (0.5%). NoInfo: 5/1578 (0.3%). Certain keep: 1559/1578 (98.8%) ########################## YHR165C (7242bp = 2414AA) has 17 hits (PRP8) U5 snRNP and spliceosome component Spar (test2) orthologous hit at 89% f7040/7223 (97.5%) over 7242bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f7108/7217 (98.5%) over 7232bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f3807/4292 (88.7%) over 4295bp for offset 1 Sbay (test3) Longest island has f100 at 85% over 3823bp <== THIS IS REAL 012340567809111k1111k1112k2222k2222k2333k33333k3344k4444k4444k5555k5555k5566k6666k66667k777k |||||_||||_||||_||||_||||_||||_||||_||||_|||||_||||_||||_||||_||||_||||_||||_||||_|||||_||| 100f 85% 3823bp 100f 8Sb175brk |===============================================|ooooo| YHR165C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR165C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1579 (0.4%). Conflicting: 8/1579 (0.5%). NoInfo: 5/1579 (0.3%). Certain keep: 1560/1579 (98.8%) ########################## YHR166C (1881bp = 627AA) has 10 hits (CDC23) Cell division cycle protein Spar (test2) orthologous hit at 92% f1881/1881 (100.0%) over 1881bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1881/1881 (100.0%) over 1881bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1880/1880 (100.0%) over 1880bp for offset 0 <== THIS IS REAL YHR166C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR166C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1580 (0.4%). Conflicting: 8/1580 (0.5%). NoInfo: 5/1580 (0.3%). Certain keep: 1561/1580 (98.8%) ########################## YHR167W (786bp = 262AA) has 5 hits (THP2) Spar (test2) orthologous hit at 91% f783/783 (100.0%) over 786bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f781/785 (99.5%) over 786bp for offset 0 <== THIS IS REAL YHR167W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR167W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1581 (0.4%). Conflicting: 8/1581 (0.5%). NoInfo: 5/1581 (0.3%). Certain keep: 1562/1581 (98.8%) ########################## YHR169W (1296bp = 432AA) has 45 hits (DBP8) DEAD-box protein Spar (test2) orthologous hit at 92% f1292/1295 (99.8%) over 1296bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1292/1295 (99.8%) over 1296bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1292/1292 (100.0%) over 1292bp for offset 0 <== THIS IS REAL YHR169W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR169W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1582 (0.4%). Conflicting: 8/1582 (0.5%). NoInfo: 5/1582 (0.3%). Certain keep: 1563/1582 (98.8%) ########################## YHR170W (1557bp = 519AA) has 15 hits (NMD3) cytoplasmic factor required for a la..0S subunit (127) Spar (test2) orthologous hit at 92% f1557/1557 (100.0%) over 1557bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1557/1557 (100.0%) over 1557bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1556/1557 (99.9%) over 1557bp for offset 0 <== THIS IS REAL YHR170W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR170W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1583 (0.4%). Conflicting: 8/1583 (0.5%). NoInfo: 5/1583 (0.3%). Certain keep: 1564/1583 (98.8%) ########################## YHR171W (1893bp = 631AA) has 11 hits (APG7) similar to ubiquitin-activating enzy.. autophagy (106) Spar (test2) orthologous hit at 88% f1884/1891 (99.6%) over 1892bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1888/1892 (99.8%) over 1893bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1854/1889 (98.1%) over 1893bp for offset 0 <== THIS IS REAL YHR171W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR171W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1584 (0.4%). Conflicting: 8/1584 (0.5%). NoInfo: 5/1584 (0.3%). Certain keep: 1565/1584 (98.8%) ########################## YHR172W (2472bp = 824AA) has 18 hits (SPC97) spindle pole body component, associ..of the SBP (181) Spar (test2) orthologous hit at 90% f2464/2470 (99.8%) over 2472bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2451/2468 (99.3%) over 2472bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1650/1986 (83.1%) over 1990bp for offset 0 Sbay (test3) Longest island has f99 at 80% over 1669bp <== THIS IS REAL 0 100 200300 400 500600 700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k |__|___|__|___|___|__|___|___|__|___|___|__|___|__|___|___|__|___|___|__|___|___|__|___|__| 99f 80% 1669bp 98f 75% 325bSb173brk |============================================================|ooooooooooo| YHR172W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR172W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1585 (0.4%). Conflicting: 8/1585 (0.5%). NoInfo: 5/1585 (0.3%). Certain keep: 1566/1585 (98.8%) ########################## YHR174W (1314bp = 438AA) has 8 hits (ENO2) enolase Spar (test2) orthologous hit at 99% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 98% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 92% f1314/1314 (100.0%) over 1314bp for offset 0 <== THIS IS REAL YHR174W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR174W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1586 (0.4%). Conflicting: 8/1586 (0.5%). NoInfo: 5/1586 (0.3%). Certain keep: 1567/1586 (98.8%) ########################## YHR175W (570bp = 190AA) has 8 hits (CTR2) copper transporter Spar (test2) orthologous hit at 90% f501/567 (88.4%) over 570bp for offset 0 Spar (test3) Longest island has f100 at 93% over 497bp <== THIS IS REAL Smik (test2) orthologous hit at 80% f498/565 (88.1%) over 570bp for offset 2 Smik (test3) Longest island has f98 at 83% over 487bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f464/477 (97.3%) over 479bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 570 |______________|_______________|_______________|_______________|______________|___________| 100f 93% 497bp Sp31full |...........|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| 98f 83% 487bp Sm663full |.............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YHR175W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR175W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1587 (0.4%). Conflicting: 8/1587 (0.5%). NoInfo: 5/1587 (0.3%). Certain keep: 1568/1587 (98.8%) ########################## YHR178W (2232bp = 744AA) has 10 hits (STB5) Zinc finger (6-Cys) Spar (test2) orthologous hit at 90% f2232/2232 (100.0%) over 2232bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1561/1578 (98.9%) over 1585bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1588/1616 (98.3%) over 1617bp for offset 1 <== THIS IS REAL YHR178W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR178W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1588 (0.4%). Conflicting: 8/1588 (0.5%). NoInfo: 5/1588 (0.3%). Certain keep: 1569/1588 (98.8%) ########################## YHR179W (1203bp = 401AA) has 10 hits (OYE2) NAPDH dehydrogenase (old yellow enzy.. isoform 2 (94) Spar (test2) orthologous hit at 92% f1203/1203 (100.0%) over 1203bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1197/1202 (99.6%) over 1203bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1203/1203 (100.0%) over 1203bp for offset 0 <== THIS IS REAL YHR179W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR179W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1589 (0.4%). Conflicting: 8/1589 (0.5%). NoInfo: 5/1589 (0.3%). Certain keep: 1570/1589 (98.8%) ########################## YHR183W (1470bp = 490AA) has 12 hits (GND1) Phosphogluconate Dehydrogenase (Deca..oxylating) (92) Spar (test2) orthologous hit at 96% f873/873 (100.0%) over 873bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f916/916 (100.0%) over 916bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f1470/1470 (100.0%) over 1470bp for offset 0 <== THIS IS REAL YHR183W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR183W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1590 (0.4%). Conflicting: 8/1590 (0.5%). NoInfo: 5/1590 (0.3%). Certain keep: 1571/1590 (98.8%) ########################## YHR184W (1716bp = 572AA) has 46 hits (SSP1) involved in meiosis, nuclear divisio.. formation (101) Spar (test2) orthologous hit at 88% f1716/1716 (100.0%) over 1716bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1687/1713 (98.5%) over 1716bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1090/1128 (96.6%) over 1129bp for offset 2 <== THIS IS REAL YHR184W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR184W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1591 (0.4%). Conflicting: 8/1591 (0.5%). NoInfo: 5/1591 (0.3%). Certain keep: 1572/1591 (98.8%) ########################## YHR185C (714bp = 238AA) has 13 hits (PFS1) (putative) involved in meiosis Spar (test2) orthologous hit at 91% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL YHR185C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR185C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1592 (0.4%). Conflicting: 8/1592 (0.5%). NoInfo: 5/1592 (0.3%). Certain keep: 1573/1592 (98.8%) ########################## YHR187W (930bp = 310AA) has 6 hits (IKI1) involved in sensitivity to pGKL killer toxin Spar (test2) orthologous hit at 88% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f917/924 (99.2%) over 929bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f923/928 (99.5%) over 930bp for offset 0 <== THIS IS REAL YHR187W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR187W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1593 (0.4%). Conflicting: 8/1593 (0.5%). NoInfo: 5/1593 (0.3%). Certain keep: 1574/1593 (98.8%) ########################## YHR188C (1833bp = 611AA) has 6 hits (GPI16) YHR188C Spar (test2) orthologous hit at 90% f1833/1833 (100.0%) over 1833bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1819/1830 (99.4%) over 1832bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1820/1829 (99.5%) over 1832bp for offset 0 <== THIS IS REAL YHR188C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR188C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1594 (0.4%). Conflicting: 8/1594 (0.5%). NoInfo: 5/1594 (0.3%). Certain keep: 1575/1594 (98.8%) ########################## YHR190W (1335bp = 445AA) has 4 hits (ERG9) squalene synthetase Spar (test2) orthologous hit at 91% f1335/1335 (100.0%) over 1335bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1335/1335 (100.0%) over 1335bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1335/1335 (100.0%) over 1335bp for offset 0 <== THIS IS REAL YHR190W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR190W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1595 (0.4%). Conflicting: 8/1595 (0.5%). NoInfo: 5/1595 (0.3%). Certain keep: 1576/1595 (98.8%) ########################## YHR191C (402bp = 134AA) has 4 hits (CTF8) (putative) kinetochore protein Spar (test2) orthologous hit at 90% f398/401 (99.3%) over 402bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f397/401 (99.0%) over 402bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f389/399 (97.5%) over 402bp for offset 0 <== THIS IS REAL YHR191C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR191C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1596 (0.4%). Conflicting: 8/1596 (0.5%). NoInfo: 5/1596 (0.3%). Certain keep: 1577/1596 (98.8%) ########################## YHR193C (525bp = 175AA) has 14 hits (EGD2) GAL4 enhancer protein, homolog of hum..ed complex (146) Spar (test2) orthologous hit at 95% f525/525 (100.0%) over 525bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 93% f525/525 (100.0%) over 525bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f520/522 (99.6%) over 525bp for offset 0 <== THIS IS REAL YHR193C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR193C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1597 (0.4%). Conflicting: 8/1597 (0.5%). NoInfo: 5/1597 (0.3%). Certain keep: 1578/1597 (98.8%) ########################## YHR195W (966bp = 322AA) has 13 hits (NVJ1) Vac8p binding protein; nucleus-vacuole junction Spar (test2) orthologous hit at 87% f961/965 (99.6%) over 966bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f684/748 (91.4%) over 751bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f678/744 (91.1%) over 758bp for offset 0 <== THIS IS REAL YHR195W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR195W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1598 (0.4%). Conflicting: 8/1598 (0.5%). NoInfo: 5/1598 (0.3%). Certain keep: 1579/1598 (98.8%) ########################## YHR196W (1728bp = 576AA) has 125 hits (UTP9) Protein required for cell viability Spar (test2) orthologous hit at 89% f1718/1726 (99.5%) over 1728bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1694/1716 (98.7%) over 1728bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1668/1717 (97.1%) over 1728bp for offset 0 <== THIS IS REAL YHR196W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR196W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1599 (0.4%). Conflicting: 8/1599 (0.5%). NoInfo: 5/1599 (0.3%). Certain keep: 1580/1599 (98.8%) ########################## YHR200W (807bp = 269AA) has 49 hits (RPN10) homolog of the mammalian S5a protein..proteasome (109) Spar (test2) orthologous hit at 91% f803/804 (99.9%) over 807bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f791/791 (100.0%) over 791bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f779/789 (98.7%) over 792bp for offset 2 <== THIS IS REAL YHR200W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR200W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1600 (0.4%). Conflicting: 8/1600 (0.5%). NoInfo: 5/1600 (0.3%). Certain keep: 1581/1600 (98.8%) ########################## YHR201C (1194bp = 398AA) has 5 hits (PPX1) Cytosolic exopolyphosphatase Spar (test2) orthologous hit at 87% f1187/1192 (99.6%) over 1194bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1178/1191 (98.9%) over 1194bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1167/1171 (99.7%) over 1178bp for offset 0 <== THIS IS REAL YHR201C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR201C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1601 (0.4%). Conflicting: 8/1601 (0.5%). NoInfo: 5/1601 (0.3%). Certain keep: 1582/1601 (98.8%) ########################## YHR204W (2391bp = 797AA) has 7 hits (MNL1) Spar (test2) orthologous hit at 87% f2386/2390 (99.8%) over 2391bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2343/2380 (98.4%) over 2391bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2357/2386 (98.8%) over 2391bp for offset 0 <== THIS IS REAL YHR204W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR204W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1602 (0.4%). Conflicting: 8/1602 (0.5%). NoInfo: 5/1602 (0.3%). Certain keep: 1583/1602 (98.8%) ########################## YHR205W (2475bp = 825AA) has 293 hits (SCH9) cAMP-dependent protein kinase homol..of cdc25ts (105) Spar (test2) orthologous hit at 92% f2475/2475 (100.0%) over 2475bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2454/2465 (99.6%) over 2475bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1787/1883 (94.9%) over 1887bp for offset 0 <== THIS IS REAL YHR205W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR205W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1603 (0.4%). Conflicting: 8/1603 (0.5%). NoInfo: 5/1603 (0.3%). Certain keep: 1584/1603 (98.8%) ########################## YHR206W (1869bp = 623AA) (tdist=48.0k) has 97 hits (SKN7) transcription factor i..s response (116) Spar (test2) orthologous hit at 91% f1869/1869 (100.0%) over 1869bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1850/1867 (99.1%) over 1869bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1734/1735 (99.9%) over 1741bp for offset 0 <== THIS IS REAL YHR206W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR206W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1604 (0.4%). Conflicting: 8/1604 (0.5%). NoInfo: 5/1604 (0.3%). Certain keep: 1585/1604 (98.8%) ########################## YHR207C (1581bp = 527AA) (tdist=46.1k) has 6 hits (SET5) Spar (test2) orthologous hit at 90% f1581/1581 (100.0%) over 1581bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1557/1578 (98.7%) over 1581bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f743/809 (91.8%) over 818bp for offset 2 <== THIS IS REAL YHR207C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR207C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1605 (0.4%). Conflicting: 8/1605 (0.5%). NoInfo: 5/1605 (0.3%). Certain keep: 1586/1605 (98.8%) ########################## YHR208W (1182bp = 394AA) (tdist=43.9k) has 9 hits (BAT1) branched-chain amino ac..cogene myc (170) Spar (test2) orthologous hit at 91% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1177/1181 (99.7%) over 1182bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1177/1181 (99.7%) over 1182bp for offset 0 <== THIS IS REAL YHR208W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR208W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1606 (0.4%). Conflicting: 8/1606 (0.5%). NoInfo: 5/1606 (0.3%). Certain keep: 1587/1606 (98.8%) ########################## YHR211W (3228bp = 1076AA) (tdist=34.0k) has 536 hits (FLO5) Flocculin, similar t..tein Flo1p (108) Spar (test2) orthologous hit at 77% f1138/1182 (96.3%) over 1186bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 66% f1276/1450 (88.0%) over 1494bp for offset 0 Smik (test3) Longest island has f96 at 73% over 984bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 60% f1837/2305 (79.7%) over 2393bp for offset 0 Sbay (test3) Longest island has f91 at 71% over 1096bp <== THIS IS REAL 0 10020030040500600700800901k 1k 1k 1k 1k1k 1k 1k 1k1k 2k 2k 2k 2k2k 2k 2k 2k 2k2k 3k 3k 33k |_|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|_|__|__|__|__|_|__|__|__|__|_|__|__|__|| 96f 73% 984bp 67f 58% 312bp Sm662brk |==========================>|=======>....> | 91f 71% 1096bp Sb942brk |oooooooooooooooooooooooooooooo>...................................> | YHR211W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR211W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1607 (0.4%). Conflicting: 8/1607 (0.5%). NoInfo: 5/1607 (0.3%). Certain keep: 1588/1607 (98.8%) ########################## YHR215W (1404bp = 468AA) (tdist=9.1k) has 18 hits (PHO12) Acid phosphatase, near.. to Pho11p (102) Spar (test2) non-orthologous hit at 83% f1403/1403 (100.0%) over 1403bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f1398/1402 (99.7%) over 1403bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 89% f1396/1401 (99.6%) over 1403bp for offset 0 <== THIS IS REAL YHR215W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR215W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1608 (0.4%). Conflicting: 8/1608 (0.5%). NoInfo: 5/1608 (0.3%). Certain keep: 1589/1608 (98.8%) ########################## YHR216W (1572bp = 524AA) (tdist=6.6k) has 27 hits (IMD2) IMP Dehydrogenase Spar (test2) non-orthologous hit at 89% f1569/1571 (99.9%) over 1572bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1509/1511 (99.9%) over 1512bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f1562/1570 (99.5%) over 1572bp for offset 0 <== THIS IS REAL YHR216W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YHR216W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1609 (0.4%). Conflicting: 8/1609 (0.5%). NoInfo: 5/1609 (0.3%). Certain keep: 1590/1609 (98.8%) ########################## YIL173W (4650bp = 1550AA) (tdist=11.4k) has 87 hits (VTH1) potential membrane gl..Pep1/Vps10 (136) Spar (test2) non-orthologous hit at 78% f3603/3758 (95.9%) over 3779bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 74% f2101/2239 (93.8%) over 2258bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 76% f1478/1501 (98.5%) over 1504bp for offset 0 <== THIS IS REAL YIL173W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL173W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1610 (0.4%). Conflicting: 8/1610 (0.5%). NoInfo: 5/1610 (0.3%). Certain keep: 1591/1610 (98.8%) ########################## YIL171W (330bp = 110AA) (tdist=19.5k) has 53 hits (HXT12) hexose permease Spar (test2) non-orthologous hit at 86% f296/328 (90.2%) over 330bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 76% f282/326 (86.5%) over 330bp for offset 1 Smik (test3) Longest island has f98 at 77% over 288bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 67% f245/309 (79.3%) over 315bp for offset 1 Sbay (test3) Longest island has f88 at 68% over 280bp Sbay (test2) non-orthologous hit at 62% f256/308 (83.1%) over 314bp for offset 1 Sbay (test3) Longest island has f93 at 63% over 276bp <== THIS IS REAL 0 100 200 300 330 |__________________________|__________________________|__________________________|________| 98f 77% 288bp Sm634full |=============================================================================>...........| 88f 68% 280bp 100f 63% Sb188full |===========================================================================>|oooooooo|o> 93f 63% 276bp Sb448full |==========================================================================>..........| YIL171W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL171W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1611 (0.4%). Conflicting: 8/1611 (0.5%). NoInfo: 5/1611 (0.3%). Certain keep: 1592/1611 (98.8%) ########################## YIL170W (1374bp = 458AA) (tdist=19.8k) has 106 hits (HXT12) hexose permease Spar (test2) orthologous hit at 89% f699/708 (98.7%) over 708bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 83% f144/144 (100.0%) over 144bp for offset 0 Smik (test3) Longest island has f100 at 83% over 144bp Sbay (test2) non-orthologous hit at 71% f1228/1341 (91.6%) over 1361bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|_____|______|_____|______|_____|______|______|_____|______|____| 100f 83% 1Sm635brk |=========| YIL170W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YIL170W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 6/1612 (0.4%). Conflicting: 8/1612 (0.5%). NoInfo: 5/1612 (0.3%). Certain keep: 1593/1612 (98.8%) ########################## YIL168W (384bp = 128AA) (tdist=29.0k) has 6 hits (SDL1) L-serine dehydratase Spar (test2) orthologous hit at 89% f380/380 (100.0%) over 380bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f370/379 (97.6%) over 381bp for offset 0 <== THIS IS REAL YIL168W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YIL168W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 6/1613 (0.4%). Conflicting: 8/1613 (0.5%). NoInfo: 5/1613 (0.3%). Certain keep: 1594/1613 (98.8%) ########################## YIL164C (600bp = 200AA) (tdist=34.0k) has 4 hits (NIT1) nitrilase Spar (test2) orthologous hit at 88% f600/600 (100.0%) over 600bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f600/600 (100.0%) over 600bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f600/600 (100.0%) over 600bp for offset 0 <== THIS IS REAL YIL164C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL164C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1614 (0.4%). Conflicting: 8/1614 (0.5%). NoInfo: 5/1614 (0.3%). Certain keep: 1595/1614 (98.8%) ########################## YIL162W (1599bp = 533AA) (tdist=37.3k) has 6 hits (SUC2) invertase (sucrose hydr..ng enzyme) (95) Spar (test2) orthologous hit at 91% f1599/1599 (100.0%) over 1599bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1597/1597 (100.0%) over 1597bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1599/1599 (100.0%) over 1599bp for offset 0 <== THIS IS REAL YIL162W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL162W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1615 (0.4%). Conflicting: 8/1615 (0.5%). NoInfo: 5/1615 (0.3%). Certain keep: 1596/1615 (98.8%) ########################## YIL160C (1254bp = 418AA) (tdist=40.1k) has 5 hits (POT1) peroxisomal 3-oxoacyl C..A thiolase (91) Spar (test2) orthologous hit at 90% f1254/1254 (100.0%) over 1254bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1254/1254 (100.0%) over 1254bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1250/1252 (99.8%) over 1253bp for offset 0 <== THIS IS REAL YIL160C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL160C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1616 (0.4%). Conflicting: 8/1616 (0.5%). NoInfo: 5/1616 (0.3%). Certain keep: 1597/1616 (98.8%) ########################## YIL159W (4128bp = 1376AA) (tdist=41.8k) has 80 hits (BNR1) involved in actin fil..ganization (98) Spar (test2) orthologous hit at 84% f2163/2305 (93.8%) over 2323bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f4050/4117 (98.4%) over 4126bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f3587/4073 (88.1%) over 4127bp for offset 0 Sbay (test3) Longest island has f98 at 79% over 1667bp <== THIS IS REAL 0 10203040500607080901k1k 1k1k1k1k1k 1k1k1k2k2k2k 2k2k2k2k2k 2k2k3k3k3k3k 3k3k3k3k3k 3k4k44k |_|_|_|_|_|__|_|_|_|_|_|__|_|_|_|_|__|_|_|_|_|_|__|_|_|_|_|__|_|_|_|_|_|__|_|_|_|_|__|_|_|| 97f 75% 1532bp 96f 70% 398f 79% 1667bp Sb481full |================================>...........|======>.|===================================|> YIL159W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL159W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1617 (0.4%). Conflicting: 8/1617 (0.5%). NoInfo: 5/1617 (0.3%). Certain keep: 1598/1617 (98.8%) ########################## YIL156W (3216bp = 1072AA) (tdist=48.0k) has 41 hits (UBP7) Ubiquitin-specific protease Spar (test2) orthologous hit at 88% f1819/1823 (99.8%) over 1827bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3160/3202 (98.7%) over 3216bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f3066/3192 (96.1%) over 3215bp for offset 0 <== THIS IS REAL YIL156W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL156W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1618 (0.4%). Conflicting: 8/1618 (0.5%). NoInfo: 5/1618 (0.3%). Certain keep: 1599/1618 (98.8%) ########################## YIL155C (1950bp = 650AA) has 5 hits (GUT2) glycerol-3-phosphate dehydrogenase, m..ochondrial (92) Spar (test2) orthologous hit at 91% f1949/1949 (100.0%) over 1949bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1942/1948 (99.7%) over 1949bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1945/1949 (99.8%) over 1950bp for offset 0 <== THIS IS REAL YIL155C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL155C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1619 (0.4%). Conflicting: 8/1619 (0.5%). NoInfo: 5/1619 (0.3%). Certain keep: 1600/1619 (98.8%) ########################## YIL154C (1041bp = 347AA) has 89 hits (IMP2') transcription factor Spar (test2) orthologous hit at 91% f1035/1035 (100.0%) over 1041bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1034/1035 (99.9%) over 1041bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f758/775 (97.8%) over 778bp for offset 0 <== THIS IS REAL YIL154C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL154C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1620 (0.4%). Conflicting: 8/1620 (0.5%). NoInfo: 5/1620 (0.3%). Certain keep: 1601/1620 (98.8%) ########################## YIL153W (1182bp = 394AA) has 6 hits (RRD1) Resistant to Rapamycin Deletion Spar (test2) orthologous hit at 89% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1175/1181 (99.5%) over 1182bp for offset 0 <== THIS IS REAL YIL153W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL153W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1621 (0.4%). Conflicting: 8/1621 (0.5%). NoInfo: 5/1621 (0.3%). Certain keep: 1602/1621 (98.8%) ########################## YIL150C (1716bp = 572AA) has 8 hits (DNA43) (putative) involved in DNA replication Spar (test2) orthologous hit at 89% f1716/1716 (100.0%) over 1716bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1705/1714 (99.5%) over 1716bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1691/1707 (99.1%) over 1716bp for offset 0 <== THIS IS REAL YIL150C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL150C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1622 (0.4%). Conflicting: 8/1622 (0.5%). NoInfo: 5/1622 (0.3%). Certain keep: 1603/1622 (98.8%) ########################## YIL149C (5040bp = 1680AA) has 268 hits (MLP2) colied-coil protein (putative), si..in and TPR (103) Spar (test2) orthologous hit at 84% f4991/5034 (99.1%) over 5040bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f4228/4458 (94.8%) over 4492bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f4829/5006 (96.5%) over 5040bp for offset 0 <== THIS IS REAL YIL149C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL149C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1623 (0.4%). Conflicting: 8/1623 (0.5%). NoInfo: 5/1623 (0.3%). Certain keep: 1604/1623 (98.8%) ########################## YIL147C (3663bp = 1221AA) has 20 hits (SLN1) histidine kinase osmosensor that re..regulators (174) Spar (test2) orthologous hit at 89% f3657/3662 (99.9%) over 3663bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3614/3656 (98.9%) over 3663bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2602/2690 (96.7%) over 2696bp for offset 0 <== THIS IS REAL YIL147C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL147C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1624 (0.4%). Conflicting: 8/1624 (0.5%). NoInfo: 5/1624 (0.3%). Certain keep: 1605/1624 (98.8%) ########################## YIL146C (1590bp = 530AA) has 11 hits (ECM37) (putative) involved in cell wall biogenesis Spar (test2) orthologous hit at 90% f1587/1587 (100.0%) over 1590bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1046/1047 (99.9%) over 1053bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f566/582 (97.3%) over 584bp for offset 0 <== THIS IS REAL YIL146C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL146C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1625 (0.4%). Conflicting: 8/1625 (0.5%). NoInfo: 5/1625 (0.3%). Certain keep: 1606/1625 (98.8%) ########################## YIL145C (1038bp = 346AA) has 6 hits (PAN6) Spar (test2) orthologous hit at 88% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1030/1038 (99.2%) over 1038bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f940/1031 (91.2%) over 1035bp for offset 0 <== THIS IS REAL YIL145C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL145C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1626 (0.4%). Conflicting: 8/1626 (0.5%). NoInfo: 5/1626 (0.3%). Certain keep: 1607/1626 (98.8%) ########################## YIL144W (2076bp = 692AA) has 100 hits (TID3) Product of gene unknown Spar (test2) orthologous hit at 90% f2076/2076 (100.0%) over 2076bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2059/2073 (99.3%) over 2076bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2035/2070 (98.3%) over 2076bp for offset 1 <== THIS IS REAL YIL144W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL144W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1627 (0.4%). Conflicting: 8/1627 (0.5%). NoInfo: 5/1627 (0.3%). Certain keep: 1608/1627 (98.8%) ########################## YIL143C (2532bp = 844AA) has 10 hits (SSL2) DNA helicase homolog; homolog of hum..PBC, ERCC3 (94) Spar (test2) orthologous hit at 92% f2532/2532 (100.0%) over 2532bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2521/2528 (99.7%) over 2532bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2502/2526 (99.0%) over 2532bp for offset 0 <== THIS IS REAL YIL143C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL143C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1628 (0.4%). Conflicting: 8/1628 (0.5%). NoInfo: 5/1628 (0.3%). Certain keep: 1609/1628 (98.8%) ########################## YIL142W (1584bp = 528AA) has 25 hits (CCT2) molecular chaperone Spar (test2) orthologous hit at 92% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL YIL142W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL142W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1629 (0.4%). Conflicting: 8/1629 (0.5%). NoInfo: 5/1629 (0.3%). Certain keep: 1610/1629 (98.8%) ########################## YIL140W (2472bp = 824AA) has 11 hits (AXL2) localizes to the plasma membrane Flanking ORFs are: YIL143C and YIL141W. YIL140W skipped ########################## YIL139C (738bp = 246AA) has 17 hits (REV7) subunit of DNA polymerase-zeta (Pol-z.. synthesis (151) Spar (test2) orthologous hit at 89% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f661/678 (97.5%) over 679bp for offset 0 <== THIS IS REAL YIL139C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL139C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1630 (0.4%). Conflicting: 8/1630 (0.5%). NoInfo: 5/1630 (0.3%). Certain keep: 1611/1630 (98.8%) ########################## YIL138C (486bp = 162AA) has 63 hits (TPM2) Tropomyosin isoform 2 Spar (test2) orthologous hit at 91% f486/486 (100.0%) over 486bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 55% f187/345 (54.2%) over 363bp for offset 0 Smik (test3) Longest island has f100 at 51% over 85bp Smik (test2) orthologous hit at 90% f142/142 (100.0%) over 142bp for offset 0 Smik (test3) Longest island has f100 at 91% over 142bp Sbay (test2) orthologous hit at 85% f478/485 (98.6%) over 486bp for offset 0 <== THIS IS REAL 0 100 200 300 400 486 |_________________|__________________|_________________|__________________|_______________| 82f 86% 28bp 76f 57% 21bp 65f 55%75f 61100f 57%100f 51% 85bp Sm635full |====>.......|xx>.................|ooooo>|xxxx>|====>..|==============> | 100f 91% 142bp Sm635brk ||=========================| YIL138C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YIL138C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 6/1631 (0.4%). Conflicting: 8/1631 (0.5%). NoInfo: 5/1631 (0.3%). Certain keep: 1612/1631 (98.8%) ########################## YIL136W (1182bp = 394AA) has 7 hits (OM45) 45-kDa mitochondrial outer membrane protein Spar (test2) orthologous hit at 91% f1182/1182 (100.0%) over 1182bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1177/1179 (99.8%) over 1182bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1174/1181 (99.4%) over 1182bp for offset 0 <== THIS IS REAL YIL136W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL136W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1632 (0.4%). Conflicting: 8/1632 (0.5%). NoInfo: 5/1632 (0.3%). Certain keep: 1613/1632 (98.8%) ########################## YIL134W (936bp = 312AA) has 8 hits (FLX1) mitochondrial inner membrane carrier p..in for FAD (94) Spar (test2) orthologous hit at 89% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f736/750 (98.1%) over 753bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f734/828 (88.6%) over 839bp for offset 0 Sbay (test3) Longest island has f96 at 80% over 738bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 936 |________|_________|________|_________|_________|________|_________|________|_________|___| 96f 80% 738bp Sb482full |..........|=====================================================================| YIL134W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL134W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1633 (0.4%). Conflicting: 8/1633 (0.5%). NoInfo: 5/1633 (0.3%). Certain keep: 1614/1633 (98.8%) ########################## YIL132C (642bp = 214AA) has 6 hits (CSM2) Protein required for meiotic chromosom..egregation (93) Spar (test2) orthologous hit at 90% f636/636 (100.0%) over 642bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f626/635 (98.6%) over 642bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f593/633 (93.7%) over 641bp for offset 0 <== THIS IS REAL YIL132C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL132C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1634 (0.4%). Conflicting: 8/1634 (0.5%). NoInfo: 5/1634 (0.3%). Certain keep: 1615/1634 (98.8%) ########################## YIL131C (1455bp = 485AA) has 17 hits (FKH1) forkhead protein Spar (test2) orthologous hit at 90% f1452/1452 (100.0%) over 1455bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1440/1447 (99.5%) over 1450bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1424/1452 (98.1%) over 1455bp for offset 0 <== THIS IS REAL YIL131C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL131C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1635 (0.4%). Conflicting: 8/1635 (0.5%). NoInfo: 5/1635 (0.3%). Certain keep: 1616/1635 (98.8%) ########################## YIL130W (2895bp = 965AA) has 1303 hits (GIN1) Hypothetical ORF Spar (test2) orthologous hit at 89% f2888/2891 (99.9%) over 2895bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f311/312 (99.7%) over 312bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2653/2697 (98.4%) over 2706bp for offset 0 <== THIS IS REAL YIL130W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL130W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1636 (0.4%). Conflicting: 8/1636 (0.5%). NoInfo: 5/1636 (0.3%). Certain keep: 1617/1636 (98.8%) ########################## YIL129C (7131bp = 2377AA) has 22 hits (TAO3) Transcriptional Activator of OCH1 Spar (test2) orthologous hit at 91% f7126/7130 (99.9%) over 7131bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f4808/4811 (99.9%) over 4812bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f6812/6843 (99.5%) over 6855bp for offset 0 <== THIS IS REAL YIL129C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL129C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1637 (0.4%). Conflicting: 8/1637 (0.5%). NoInfo: 5/1637 (0.3%). Certain keep: 1618/1637 (98.8%) ########################## YIL128W (3099bp = 1033AA) has 36 hits (MET18) regulator of TFIIH Spar (test2) orthologous hit at 88% f3092/3094 (99.9%) over 3098bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f3090/3095 (99.8%) over 3099bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3044/3086 (98.6%) over 3099bp for offset 0 <== THIS IS REAL YIL128W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL128W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1638 (0.4%). Conflicting: 8/1638 (0.5%). NoInfo: 5/1638 (0.3%). Certain keep: 1619/1638 (98.8%) ########################## YIL126W (4080bp = 1360AA) has 126 hits (STH1) helicase related protein, snf2 homolog Spar (test2) orthologous hit at 90% f3728/3732 (99.9%) over 3737bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f4026/4079 (98.7%) over 4080bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3710/3727 (99.5%) over 3735bp for offset 0 <== THIS IS REAL YIL126W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL126W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1639 (0.4%). Conflicting: 8/1639 (0.5%). NoInfo: 5/1639 (0.3%). Certain keep: 1620/1639 (98.8%) ########################## YIL125W (3045bp = 1015AA) has 6 hits (KGD1) alpha-ketoglutarate dehydrogenase Spar (test2) orthologous hit at 90% f3045/3045 (100.0%) over 3045bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3045/3045 (100.0%) over 3045bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f3041/3044 (99.9%) over 3045bp for offset 0 <== THIS IS REAL YIL125W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL125W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1640 (0.4%). Conflicting: 8/1640 (0.5%). NoInfo: 5/1640 (0.3%). Certain keep: 1621/1640 (98.8%) ########################## YIL124W (894bp = 298AA) has 5 hits (AYR1) 1-Acyl dihydroxyacetone phosphate reductase Spar (test2) orthologous hit at 88% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f879/892 (98.5%) over 894bp for offset 0 <== THIS IS REAL YIL124W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL124W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1641 (0.4%). Conflicting: 8/1641 (0.5%). NoInfo: 5/1641 (0.3%). Certain keep: 1622/1641 (98.8%) ########################## YIL123W (1428bp = 476AA) has 527 hits (SIM1) (putative) invovled in control of D..eplication (94) Spar (test2) orthologous hit at 81% f1141/1184 (96.4%) over 1196bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f927/927 (100.0%) over 927bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1093/1227 (89.1%) over 1243bp for offset 0 Sbay (test3) Longest island has f99 at 85% over 898bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k1k |_____|_____|_____|______|_____|_____|______|_____|_____|______|_____|_____|_____|______|_| 99f 85% 898bp Sb482full |......................|=======================================================|> YIL123W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL123W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1642 (0.4%). Conflicting: 8/1642 (0.5%). NoInfo: 5/1642 (0.3%). Certain keep: 1623/1642 (98.8%) ########################## YIL122W (1056bp = 352AA) has 11 hits (POG1) Hypothetical ORF Spar (test2) orthologous hit at 90% f1056/1056 (100.0%) over 1056bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1056/1056 (100.0%) over 1056bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1035/1050 (98.6%) over 1056bp for offset 0 <== THIS IS REAL YIL122W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL122W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1643 (0.4%). Conflicting: 8/1643 (0.5%). NoInfo: 5/1643 (0.3%). Certain keep: 1624/1643 (98.8%) ########################## YIL120W (1692bp = 564AA) has 15 hits (QDR1) MFS-MDR transporter Spar (test2) orthologous hit at 87% f1689/1691 (99.9%) over 1692bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 67% f677/1585 (42.7%) over 1617bp for offset 1 Smik (test3) Longest island has f95 at 76% over 212bp Smik (test2) orthologous hit at 65% f1379/1517 (90.9%) over 1532bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1549/1593 (97.2%) over 1597bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|_____|____|____|_____|____|____|_____|____|____|_____|____|____|_____|____| 95f 76% 212bp Sm390full |.........................................................|oooooooooo>................> | YIL120W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL120W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1644 (0.4%). Conflicting: 8/1644 (0.5%). NoInfo: 5/1644 (0.3%). Certain keep: 1625/1644 (98.8%) ########################## YIL119C (1224bp = 408AA) has 542 hits (RPI1) inhibitor of ras Spar (test2) orthologous hit at 83% f884/991 (89.2%) over 1002bp for offset 0 Spar (test3) Longest island has f99 at 88% over 882bp <== THIS IS REAL Smik (test2) orthologous hit at 72% f556/738 (75.3%) over 755bp for offset 2 Smik (test3) Longest island has f98 at 82% over 531bp <== THIS IS REAL Sbay (test2) orthologous hit at 66% f729/1015 (71.8%) over 1039bp for offset 0 Sbay (test3) Longest island has f99 at 80% over 543bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k1k |______|______|_______|______|______|_______|______|______|_______|______|______|_______|_| 99f 88% 882bp Sp440full |================================================================>........> | 98f 82% 531bp Sm390full |.................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> 99f 80% 543bp Sb482full |.....................................|======================================|> YIL119C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL119C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1645 (0.4%). Conflicting: 8/1645 (0.5%). NoInfo: 5/1645 (0.3%). Certain keep: 1626/1645 (98.8%) ########################## YIL118W (696bp = 232AA) has 26 hits (RHO3) ras homolog--GTP binding protein Spar (test2) orthologous hit at 93% f696/696 (100.0%) over 696bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f696/696 (100.0%) over 696bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f695/696 (99.9%) over 696bp for offset 0 <== THIS IS REAL YIL118W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL118W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1646 (0.4%). Conflicting: 8/1646 (0.5%). NoInfo: 5/1646 (0.3%). Certain keep: 1627/1646 (98.8%) ########################## YIL117C (957bp = 319AA) has 5 hits (PRM5) Spar (test2) orthologous hit at 85% f954/957 (99.7%) over 957bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f837/862 (97.1%) over 867bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f862/920 (93.7%) over 929bp for offset 1 <== THIS IS REAL YIL117C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL117C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1647 (0.4%). Conflicting: 8/1647 (0.5%). NoInfo: 5/1647 (0.3%). Certain keep: 1628/1647 (98.8%) ########################## YIL116W (1158bp = 386AA) has 8 hits (HIS5) histidinol-phosphate aminotransferase Spar (test2) orthologous hit at 90% f1148/1157 (99.2%) over 1158bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1158/1158 (100.0%) over 1158bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1151/1157 (99.5%) over 1158bp for offset 2 <== THIS IS REAL YIL116W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL116W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1648 (0.4%). Conflicting: 8/1648 (0.5%). NoInfo: 5/1648 (0.3%). Certain keep: 1629/1648 (98.8%) ########################## YIL115C (4383bp = 1461AA) has 37 hits (NUP159) 159-kDa nucleoporin with coiled-c..cleoporins (134) Spar (test2) orthologous hit at 84% f1690/1718 (98.4%) over 1724bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 71% f3735/4309 (86.7%) over 4382bp for offset 0 Smik (test3) Longest island has f99 at 80% over 1281bp <== THIS IS REAL Sbay (test2) orthologous hit at 70% f1476/1611 (91.6%) over 1632bp for offset 2 <== THIS IS REAL 0 1020304050607080901k1k1k1k1k1k1k1k1k 1k2k2k2k2k2k2k2k2k2k2k3k3k3k3k3k3k3k3k 3k3k4k4k4k4k4k |_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_| 99f 80% 1281bp 91f 67%97f 73% 782bp 98f 80% 1078bp Sm390full |=========================>......|====>.|===============>............|====================|> YIL115C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL115C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1649 (0.4%). Conflicting: 8/1649 (0.5%). NoInfo: 5/1649 (0.3%). Certain keep: 1630/1649 (98.8%) ########################## YIL114C (846bp = 282AA) has 10 hits (POR2) voltage dependent anion channel (YVDAC2) Spar (test2) orthologous hit at 85% f839/839 (100.0%) over 839bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f829/837 (99.0%) over 839bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f821/843 (97.4%) over 846bp for offset 0 <== THIS IS REAL YIL114C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL114C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1650 (0.4%). Conflicting: 8/1650 (0.5%). NoInfo: 5/1650 (0.3%). Certain keep: 1631/1650 (98.8%) ########################## YIL109C (2781bp = 927AA) has 22 hits (SEC24) vesicle coat component Spar (test2) orthologous hit at 92% f2781/2781 (100.0%) over 2781bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2779/2781 (99.9%) over 2781bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2776/2780 (99.9%) over 2781bp for offset 0 <== THIS IS REAL YIL109C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL109C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1651 (0.4%). Conflicting: 8/1651 (0.5%). NoInfo: 5/1651 (0.3%). Certain keep: 1632/1651 (98.8%) ########################## YIL107C (2484bp = 828AA) has 11 hits (PFK26) 6-Phosphofructose-2-kinase Spar (test2) orthologous hit at 91% f2479/2482 (99.9%) over 2483bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2471/2481 (99.6%) over 2484bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2459/2479 (99.2%) over 2484bp for offset 0 <== THIS IS REAL YIL107C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL107C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1652 (0.4%). Conflicting: 8/1652 (0.5%). NoInfo: 5/1652 (0.3%). Certain keep: 1633/1652 (98.8%) ########################## YIL104C (1524bp = 508AA) has 12 hits (SHQ1) Essential protein involved in snoRNA..umulation. (94) Spar (test2) orthologous hit at 88% f1511/1522 (99.3%) over 1524bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1511/1523 (99.2%) over 1524bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1516/1522 (99.6%) over 1524bp for offset 0 <== THIS IS REAL YIL104C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL104C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1653 (0.4%). Conflicting: 8/1653 (0.5%). NoInfo: 5/1653 (0.3%). Certain keep: 1634/1653 (98.9%) ########################## YIL101C (1944bp = 648AA) has 14 hits (XBP1) transcriptional repressor Spar (test2) orthologous hit at 88% f241/249 (96.8%) over 249bp for offset 1 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f1229/1262 (97.4%) over 1271bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 78% f483/673 (71.8%) over 674bp for offset 1 Sbay (test3) Longest island has f97 at 79% over 498bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|____|___|____|____|___|____|___|____|____|___|____|____|___|____|___|__| 97f 79% 498bp Sb482brk ||oooooooooooooooooooooo>......>| YIL101C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL101C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1654 (0.4%). Conflicting: 8/1654 (0.5%). NoInfo: 5/1654 (0.3%). Certain keep: 1635/1654 (98.9%) ########################## YIL099W (1650bp = 550AA) has 10 hits (SGA1) intracellular glucoamylase Spar (test2) orthologous hit at 88% f1649/1649 (100.0%) over 1649bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f317/326 (97.2%) over 327bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f985/1073 (91.8%) over 1085bp for offset 0 <== THIS IS REAL YIL099W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL099W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1655 (0.4%). Conflicting: 8/1655 (0.5%). NoInfo: 5/1655 (0.3%). Certain keep: 1636/1655 (98.9%) ########################## YIL098C (468bp = 156AA) has 9 hits (FMC1) Formation of Mitochondrial Cytochromes 1 Spar (test2) orthologous hit at 87% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f467/467 (100.0%) over 467bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f452/465 (97.2%) over 468bp for offset 0 <== THIS IS REAL YIL098C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL098C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1656 (0.4%). Conflicting: 8/1656 (0.5%). NoInfo: 5/1656 (0.3%). Certain keep: 1637/1656 (98.9%) ########################## YIL097W (1551bp = 517AA) has 20 hits (FYV10) Hypothetical ORF Spar (test2) orthologous hit at 90% f1547/1550 (99.8%) over 1551bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1538/1548 (99.4%) over 1549bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1530/1547 (98.9%) over 1551bp for offset 0 <== THIS IS REAL YIL097W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL097W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1657 (0.4%). Conflicting: 8/1657 (0.5%). NoInfo: 5/1657 (0.3%). Certain keep: 1638/1657 (98.9%) ########################## YIL095W (2433bp = 811AA) has 28 hits (PRK1) probable serine/threonine-protein kinase Spar (test2) orthologous hit at 87% f2420/2426 (99.8%) over 2433bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2400/2423 (99.1%) over 2433bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1646/1700 (96.8%) over 1715bp for offset 0 <== THIS IS REAL YIL095W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL095W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1658 (0.4%). Conflicting: 8/1658 (0.5%). NoInfo: 5/1658 (0.3%). Certain keep: 1639/1658 (98.9%) ########################## YIL094C (1116bp = 372AA) has 11 hits (LYS12) Homo-isocitrate dehydrogenase Spar (test2) orthologous hit at 92% f1115/1115 (100.0%) over 1115bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1115/1115 (100.0%) over 1115bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1110/1114 (99.6%) over 1115bp for offset 0 <== THIS IS REAL YIL094C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL094C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1659 (0.4%). Conflicting: 8/1659 (0.5%). NoInfo: 5/1659 (0.3%). Certain keep: 1640/1659 (98.9%) ########################## YIL093C (795bp = 265AA) has 5 hits (RSM25) mitochondrial ribosome small subunit component Spar (test2) orthologous hit at 92% f795/795 (100.0%) over 795bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f794/794 (100.0%) over 794bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f792/794 (99.7%) over 795bp for offset 0 <== THIS IS REAL YIL093C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL093C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1660 (0.4%). Conflicting: 8/1660 (0.5%). NoInfo: 5/1660 (0.3%). Certain keep: 1641/1660 (98.9%) ########################## YIL085C (1554bp = 518AA) has 46 hits (KTR7) (putative) mannosyltransferase Spar (test2) orthologous hit at 90% f1554/1554 (100.0%) over 1554bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1541/1552 (99.3%) over 1554bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1517/1537 (98.7%) over 1540bp for offset 0 <== THIS IS REAL YIL085C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL085C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1661 (0.4%). Conflicting: 8/1661 (0.5%). NoInfo: 5/1661 (0.3%). Certain keep: 1642/1661 (98.9%) ########################## YIL084C (984bp = 328AA) has 11 hits (SDS3) (putative) transcriptional regulator Spar (test2) orthologous hit at 90% f984/984 (100.0%) over 984bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f983/983 (100.0%) over 983bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f980/983 (99.7%) over 984bp for offset 0 <== THIS IS REAL YIL084C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL084C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1662 (0.4%). Conflicting: 8/1662 (0.5%). NoInfo: 5/1662 (0.3%). Certain keep: 1643/1662 (98.9%) ########################## YIL079C (1083bp = 361AA) has 21 hits (AIR1) Spar (test2) non-orthologous hit at 88% f1071/1081 (99.1%) over 1083bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1052/1077 (97.7%) over 1083bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f814/953 (85.4%) over 978bp for offset 0 Sbay (test3) Longest island has f95 at 78% over 764bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|________|_______|_______|________|_______|_______|________|______| 95f 78% 764bp Sb484full |==============================================================>.................> | YIL079C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL079C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1663 (0.4%). Conflicting: 8/1663 (0.5%). NoInfo: 5/1663 (0.3%). Certain keep: 1644/1663 (98.9%) ########################## YIL078W (2205bp = 735AA) has 18 hits (THS1) Threonyl-tRNA synthetase, cytoplasmic Spar (test2) orthologous hit at 93% f1393/1429 (97.5%) over 1430bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2205/2205 (100.0%) over 2205bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2192/2203 (99.5%) over 2205bp for offset 0 <== THIS IS REAL YIL078W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL078W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1664 (0.4%). Conflicting: 8/1664 (0.5%). NoInfo: 5/1664 (0.3%). Certain keep: 1645/1664 (98.9%) ########################## YIL076W (1080bp = 360AA) has 8 hits (SEC28) epsilon-COP coatomer subunit Sec28p Spar (test2) orthologous hit at 89% f934/1077 (86.7%) over 1078bp for offset 1 Spar (test3) Longest island has f100 at 90% over 934bp <== THIS IS REAL Smik (test2) orthologous hit at 83% f904/1069 (84.6%) over 1074bp for offset 1 Smik (test3) Longest island has f99 at 85% over 904bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1009/1048 (96.3%) over 1054bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|________|_______|_______|________|_______|_______|________|_______|______| 100f 90% 934bp Sp26full |...........|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| 99f 85% 904bp Sm610full |..............|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YIL076W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL076W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1665 (0.4%). Conflicting: 8/1665 (0.5%). NoInfo: 5/1665 (0.3%). Certain keep: 1646/1665 (98.9%) ########################## YIL075C (2838bp = 946AA) has 125 hits (RPN2) RPN2p is a component of the 26S proteosome Spar (test2) orthologous hit at 90% f2837/2837 (100.0%) over 2837bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2549/2600 (98.0%) over 2604bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2807/2828 (99.3%) over 2837bp for offset 0 <== THIS IS REAL YIL075C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL075C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1666 (0.4%). Conflicting: 8/1666 (0.5%). NoInfo: 5/1666 (0.3%). Certain keep: 1647/1666 (98.9%) ########################## YIL074C (1410bp = 470AA) has 9 hits (SER33) 3-phosphoglycerate dehydrogenase Spar (test2) orthologous hit at 89% f1410/1410 (100.0%) over 1410bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1410/1410 (100.0%) over 1410bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1406/1409 (99.8%) over 1410bp for offset 0 <== THIS IS REAL YIL074C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL074C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1667 (0.4%). Conflicting: 8/1667 (0.5%). NoInfo: 5/1667 (0.3%). Certain keep: 1648/1667 (98.9%) ########################## YIL073C (2661bp = 887AA) has 21 hits (SPO22) meiosis-specific phospholipase A2 homolog Spar (test2) orthologous hit at 88% f2654/2661 (99.7%) over 2661bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2650/2659 (99.7%) over 2661bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2628/2652 (99.1%) over 2656bp for offset 0 <== THIS IS REAL YIL073C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL073C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1668 (0.4%). Conflicting: 8/1668 (0.5%). NoInfo: 5/1668 (0.3%). Certain keep: 1649/1668 (98.9%) ########################## YIL072W (1818bp = 606AA) has 7 hits (HOP1) DNA binding protein Spar (test2) orthologous hit at 88% f1818/1818 (100.0%) over 1818bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1796/1813 (99.1%) over 1818bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1811/1817 (99.7%) over 1818bp for offset 0 <== THIS IS REAL YIL072W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL072W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1669 (0.4%). Conflicting: 8/1669 (0.5%). NoInfo: 5/1669 (0.3%). Certain keep: 1650/1669 (98.9%) ########################## YIL071C (1335bp = 445AA) has 35 hits (PCI8) Spar (test2) orthologous hit at 90% f1335/1335 (100.0%) over 1335bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1310/1333 (98.3%) over 1335bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f880/903 (97.5%) over 904bp for offset 1 <== THIS IS REAL YIL071C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL071C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1670 (0.4%). Conflicting: 8/1670 (0.5%). NoInfo: 5/1670 (0.3%). Certain keep: 1651/1670 (98.9%) ########################## YIL070C (801bp = 267AA) has 9 hits (MAM33) Mitochondrial protein involved in respiration Spar (test2) orthologous hit at 89% f797/798 (99.9%) over 801bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f797/800 (99.6%) over 801bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f795/800 (99.4%) over 801bp for offset 0 <== THIS IS REAL YIL070C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL070C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1671 (0.4%). Conflicting: 8/1671 (0.5%). NoInfo: 5/1671 (0.3%). Certain keep: 1652/1671 (98.9%) ########################## YIL068C (2418bp = 806AA) has 34 hits (SEC6) 88 kD component of the Exocyst compl.. and EXO70 (174) Spar (test2) orthologous hit at 92% f2418/2418 (100.0%) over 2418bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2418/2418 (100.0%) over 2418bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2398/2408 (99.6%) over 2410bp for offset 0 <== THIS IS REAL YIL068C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL068C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1672 (0.4%). Conflicting: 8/1672 (0.5%). NoInfo: 5/1672 (0.3%). Certain keep: 1653/1672 (98.9%) ########################## YIL066C (2610bp = 870AA) has 16 hits (RNR3) Ribonucleotide reductase (ribonucleo..ge subunit (121) Spar (test2) orthologous hit at 91% f2606/2609 (99.9%) over 2610bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2602/2608 (99.8%) over 2610bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2602/2608 (99.8%) over 2610bp for offset 0 <== THIS IS REAL YIL066C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL066C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1673 (0.4%). Conflicting: 8/1673 (0.5%). NoInfo: 5/1673 (0.3%). Certain keep: 1654/1673 (98.9%) ########################## YIL065C (468bp = 156AA) has 4 hits (FIS1) Involved in mitochondrial division Spar (test2) orthologous hit at 91% f467/467 (100.0%) over 467bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f467/467 (100.0%) over 467bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL YIL065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1674 (0.4%). Conflicting: 8/1674 (0.5%). NoInfo: 5/1674 (0.3%). Certain keep: 1655/1674 (98.9%) ########################## YIL063C (984bp = 328AA) has 21 hits (YRB2) nuclear protein, interacts with Gsp1p and Crm1p Spar (test2) orthologous hit at 89% f980/981 (99.9%) over 984bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f965/979 (98.6%) over 984bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f822/932 (88.2%) over 952bp for offset 0 Sbay (test3) Longest island has f94 at 78% over 757bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 984 |________|________|________|________|________|________|_________|________|________|_______| 94f 78% 757bp Sb485full |..................|===================================================================|> YIL063C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL063C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1675 (0.4%). Conflicting: 8/1675 (0.5%). NoInfo: 5/1675 (0.3%). Certain keep: 1656/1675 (98.9%) ########################## YIL062C (465bp = 155AA) has 4 hits (ARC15) ARP2/3 complex component Spar (test2) orthologous hit at 93% f465/465 (100.0%) over 465bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f465/465 (100.0%) over 465bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f465/465 (100.0%) over 465bp for offset 0 <== THIS IS REAL YIL062C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL062C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1676 (0.4%). Conflicting: 8/1676 (0.5%). NoInfo: 5/1676 (0.3%). Certain keep: 1657/1676 (98.9%) ########################## YIL061C (903bp = 301AA) has 8 hits (SNP1) U1snRNP 70K protein homolog Spar (test2) orthologous hit at 89% f903/903 (100.0%) over 903bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f903/903 (100.0%) over 903bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f891/902 (98.8%) over 903bp for offset 0 <== THIS IS REAL YIL061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 6/1677 (0.4%). Conflicting: 8/1677 (0.5%). NoInfo: 5/1677 (0.3%). Certain keep: 1658/1677 (98.9%) ########################## YIL054W (318bp = 106AA) has 39 hits (FYV2) Hypothetical ORF Spar (test2) orthologous hit at 86% f154/311 (49.5%) over 318bp for offset 1 Spar (test3) Longest island has f100 at 91% over 94bp Smik (test2) orthologous hit at 79% f148/312 (47.4%) over 318bp for offset 1 Smik (test3) Longest island has f93 at 72% over 97bp Sbay (test2) orthologous hit at 72% f121/225 (53.8%) over 234bp for offset 1 Sbay (test3) Longest island has f88 at 74% over 91bp Sbay (test2) orthologous hit at 76% f48/89 (53.9%) over 92bp for offset 2 Sbay (test3) Longest island has f100 at 80% over 40bp 0 100 200 300 318 |___________________________|___________________________|___________________________|_____| 100f 96% 69bp 100f 88% 100f 84% 69bp 100f 91% 94bp Sp26full |.....|oooooooooooooooooo>|xxxxxxxx|oooooooooooooooooo>......|=========================>..| 100f 88% 58bp 100f 88% 50bp 93f 72% 97bp 100f 87% 46bp Sm610full |...|ooooooooooooooo>|=============>........|oooooooooooooooooooooooooo>.|===========>....| 100f 76% 42b88f 74% 91bp 85f 74% 39b100f 83%Sb486full ||==========>|xxxxxxxxxxxxxxxxxxxxxxxx>.........|oooooooooo|xxxxxx>| 100f100f 80% 40b100f 75% 20bp Sb486full |....|===|xxxxxxxxxx>|oooo> | YIL054W: kill: Spar Smik - keep: YIL054W - Certain Kill. Kill (Spar Smik) and Keep () Current total: Certain kills: 7/1678 (0.4%). Conflicting: 8/1678 (0.5%). NoInfo: 5/1678 (0.3%). Certain keep: 1658/1678 (98.8%) ########################## YIL053W (816bp = 272AA) has 8 hits (RHR2) DL-glycerol-3-phosphatase Spar (test2) orthologous hit at 95% f816/816 (100.0%) over 816bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f812/815 (99.6%) over 816bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 92% f813/815 (99.8%) over 816bp for offset 0 <== THIS IS REAL YIL053W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL053W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1679 (0.4%). Conflicting: 8/1679 (0.5%). NoInfo: 5/1679 (0.3%). Certain keep: 1659/1679 (98.8%) ########################## YIL051C (438bp = 146AA) has 9 hits (MMF1) Maintenance of Mitochondrial DNA 1 Spar (test2) orthologous hit at 92% f438/438 (100.0%) over 438bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f438/438 (100.0%) over 438bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f438/438 (100.0%) over 438bp for offset 0 <== THIS IS REAL YIL051C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL051C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1680 (0.4%). Conflicting: 8/1680 (0.5%). NoInfo: 5/1680 (0.3%). Certain keep: 1660/1680 (98.8%) ########################## YIL050W (858bp = 286AA) has 15 hits (PCL7) PHO85 cyclin Spar (test2) orthologous hit at 86% f857/857 (100.0%) over 857bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f850/856 (99.3%) over 858bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f830/853 (97.3%) over 858bp for offset 0 <== THIS IS REAL YIL050W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL050W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1681 (0.4%). Conflicting: 8/1681 (0.5%). NoInfo: 5/1681 (0.3%). Certain keep: 1661/1681 (98.8%) ########################## YIL049W (762bp = 254AA) has 8 hits (DFG10) involved in filamentous growth Spar (test2) orthologous hit at 89% f762/762 (100.0%) over 762bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f756/761 (99.3%) over 762bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f753/759 (99.2%) over 761bp for offset 0 <== THIS IS REAL YIL049W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL049W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1682 (0.4%). Conflicting: 8/1682 (0.5%). NoInfo: 5/1682 (0.3%). Certain keep: 1662/1682 (98.8%) ########################## YIL048W (3456bp = 1152AA) has 45 hits (NEO1) P-Type ATPase Spar (test2) orthologous hit at 92% f3453/3455 (99.9%) over 3456bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3300/3394 (97.2%) over 3407bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2313/3392 (68.2%) over 3408bp for offset 1 Sbay (test3) Longest island has f100 at 85% over 2259bp <== THIS IS REAL 0 1002030040050600708009001k1k 1k1k 1k 1k1k 1k1k 1k 2k2k 2k2k 2k 2k2k 2k2k 2k 3k3k 3k3k 3k3k |_|__|_|__|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__|_| 100f 85% 2259bp 100f 84% 983bp Sb486full |...|==========================================================|ooooooooooooooooooooooooo| YIL048W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL048W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1683 (0.4%). Conflicting: 8/1683 (0.5%). NoInfo: 5/1683 (0.3%). Certain keep: 1663/1683 (98.8%) ########################## YIL047C (2709bp = 903AA) has 9 hits (SYG1) plasma membrane protein Spar (test2) orthologous hit at 91% f2709/2709 (100.0%) over 2709bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2706/2708 (99.9%) over 2709bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2157/2163 (99.7%) over 2167bp for offset 0 <== THIS IS REAL YIL047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1684 (0.4%). Conflicting: 8/1684 (0.5%). NoInfo: 5/1684 (0.3%). Certain keep: 1664/1684 (98.8%) ########################## YIL046W (1923bp = 641AA) has 16 hits (MET30) Met30p contains five copies of WD40..ates Met4p (125) Spar (test2) orthologous hit at 90% f1715/1715 (100.0%) over 1715bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1139/1152 (98.9%) over 1153bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f640/742 (86.3%) over 747bp for offset 1 Sbay (test3) Longest island has f98 at 82% over 615bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k1k |___|____|____|___|____|____|___|____|____|___|____|____|___|____|____|___|____|____|___|_| 98f 82% 615bp Sb486brk |.|============================>...> | YIL046W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL046W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1685 (0.4%). Conflicting: 8/1685 (0.5%). NoInfo: 5/1685 (0.3%). Certain keep: 1665/1685 (98.8%) ########################## YIL045W (1617bp = 539AA) has 22 hits (PIG2) Protein with 30% identity to protein.. to YER054 (104) Spar (test2) orthologous hit at 90% f1617/1617 (100.0%) over 1617bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1612/1616 (99.8%) over 1617bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f507/571 (88.8%) over 573bp for offset 2 Sbay (test3) Longest island has f97 at 82% over 521bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 11k |____|_____|____|_____|____|_____|____|_____|_____|____|_____|____|_____|____|_____|_____|| 97f 82% 521bp Sb487brk |============================>..| YIL045W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL045W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1686 (0.4%). Conflicting: 8/1686 (0.5%). NoInfo: 5/1686 (0.3%). Certain keep: 1666/1686 (98.8%) ########################## YIL044C (897bp = 299AA) has 7 hits (AGE2) ARF GAP with effector function(s) Spar (test2) orthologous hit at 90% f897/897 (100.0%) over 897bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f892/896 (99.6%) over 897bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f523/641 (81.6%) over 652bp for offset 2 Sbay (test3) Longest island has f97 at 74% over 504bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 897 |_________|_________|_________|_________|_________|_________|_________|_________|_________| 97f 74% 504bp Sb487full |...............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YIL044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1687 (0.4%). Conflicting: 8/1687 (0.5%). NoInfo: 5/1687 (0.3%). Certain keep: 1667/1687 (98.8%) ########################## YIL043C (969bp = 323AA) has 10 hits (CBR1) cytochrome b reductase Spar (test2) orthologous hit at 92% f915/967 (94.6%) over 968bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f918/969 (94.7%) over 969bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f890/961 (92.6%) over 963bp for offset 1 <== THIS IS REAL YIL043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1688 (0.4%). Conflicting: 8/1688 (0.5%). NoInfo: 5/1688 (0.3%). Certain keep: 1668/1688 (98.8%) ########################## YIL038C (2511bp = 837AA) has 21 hits (NOT3) CCR4 trascriptional complex component Spar (test2) orthologous hit at 90% f2506/2510 (99.8%) over 2511bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2452/2502 (98.0%) over 2511bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1140/1267 (90.0%) over 1288bp for offset 1 Sbay (test3) Longest island has f96 at 79% over 987bp <== THIS IS REAL 0 100 200300 400500 600 700800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 22k |__|___|__|___|__|___|___|__|___|__|___|___|__|___|__|___|__|___|___|__|___|__|___|___|__|| 77f 51% 2196f 79% 987bp Sb487full |.|ooooooo>.|oooooooooooooooooooooooooooooooooo| YIL038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1689 (0.4%). Conflicting: 8/1689 (0.5%). NoInfo: 5/1689 (0.3%). Certain keep: 1669/1689 (98.8%) ########################## YIL037C (1971bp = 657AA) has 23 hits (PRM2) Spar (test2) orthologous hit at 80% f1813/1949 (93.0%) over 1958bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f1931/1965 (98.3%) over 1971bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f1668/1729 (96.5%) over 1738bp for offset 0 <== THIS IS REAL YIL037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1690 (0.4%). Conflicting: 8/1690 (0.5%). NoInfo: 5/1690 (0.3%). Certain keep: 1670/1690 (98.8%) ########################## YIL036W (1764bp = 588AA) has 31 hits (CST6) Chromosome STability Spar (test2) orthologous hit at 85% f1749/1753 (99.8%) over 1756bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f1525/1690 (90.2%) over 1713bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 64% f690/1013 (68.1%) over 1046bp for offset 1 Sbay (test3) Longest island has f93 at 72% over 606bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|_____|____|____|____|____|____|____|____|___| 93f 72% 606bp Sb487full |...................|=============================>..> | YIL036W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL036W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1691 (0.4%). Conflicting: 8/1691 (0.5%). NoInfo: 5/1691 (0.3%). Certain keep: 1671/1691 (98.8%) ########################## YIL035C (1119bp = 373AA) has 26 hits (CKA1) alpha subunit of casein kinase II Spar (test2) orthologous hit at 93% f1119/1119 (100.0%) over 1119bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1118/1118 (100.0%) over 1118bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1119/1119 (100.0%) over 1119bp for offset 0 <== THIS IS REAL YIL035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1692 (0.4%). Conflicting: 8/1692 (0.5%). NoInfo: 5/1692 (0.3%). Certain keep: 1672/1692 (98.8%) ########################## YIL034C (864bp = 288AA) has 4 hits (CAP2) beta subunit of capping protein Spar (test2) orthologous hit at 92% f864/864 (100.0%) over 864bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f864/864 (100.0%) over 864bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f863/863 (100.0%) over 863bp for offset 0 <== THIS IS REAL YIL034C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL034C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1693 (0.4%). Conflicting: 8/1693 (0.5%). NoInfo: 5/1693 (0.3%). Certain keep: 1673/1693 (98.8%) ########################## YIL033C (1251bp = 417AA) has 4 hits (BCY1) regulatory subunit of cAMP-dependent ..ein kinase (94) Spar (test2) orthologous hit at 92% f1251/1251 (100.0%) over 1251bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1251/1251 (100.0%) over 1251bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1251/1251 (100.0%) over 1251bp for offset 0 <== THIS IS REAL YIL033C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL033C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1694 (0.4%). Conflicting: 8/1694 (0.5%). NoInfo: 5/1694 (0.3%). Certain keep: 1674/1694 (98.8%) ########################## YIL031W (3105bp = 1035AA) has 91 hits (ULP2) Product of gene unknown Spar (test2) orthologous hit at 87% f1112/1129 (98.5%) over 1133bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 79% f1827/1941 (94.1%) over 1958bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f1330/1376 (96.7%) over 1388bp for offset 1 <== THIS IS REAL YIL031W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL031W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1695 (0.4%). Conflicting: 8/1695 (0.5%). NoInfo: 5/1695 (0.3%). Certain keep: 1675/1695 (98.8%) ########################## YIL030C (3960bp = 1320AA) has 22 hits (SSM4) integral nuclear membrane protein Spar (test2) orthologous hit at 90% f3920/3930 (99.7%) over 3930bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f2192/2198 (99.7%) over 2201bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1261/1376 (91.6%) over 1379bp for offset 1 <== THIS IS REAL YIL030C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL030C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1696 (0.4%). Conflicting: 8/1696 (0.5%). NoInfo: 5/1696 (0.3%). Certain keep: 1676/1696 (98.8%) ########################## YIL027C (426bp = 142AA) has 9 hits (KRE27) Hypothetical ORF Spar (test2) orthologous hit at 90% f426/426 (100.0%) over 426bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f426/426 (100.0%) over 426bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f420/425 (98.8%) over 426bp for offset 0 <== THIS IS REAL YIL027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1697 (0.4%). Conflicting: 8/1697 (0.5%). NoInfo: 5/1697 (0.3%). Certain keep: 1677/1697 (98.8%) ########################## YIL026C (3453bp = 1151AA) has 113 hits (IRR1) cohesin complex subunit Spar (test2) orthologous hit at 89% f3391/3401 (99.7%) over 3402bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3389/3401 (99.6%) over 3402bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f3267/3307 (98.8%) over 3311bp for offset 0 <== THIS IS REAL YIL026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1698 (0.4%). Conflicting: 8/1698 (0.5%). NoInfo: 5/1698 (0.3%). Certain keep: 1678/1698 (98.8%) ########################## YIL022W (1296bp = 432AA) has 5 hits (TIM44) 48.8 kDa protein involved in mitocho..ein import (101) Spar (test2) orthologous hit at 91% f1296/1296 (100.0%) over 1296bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1296/1296 (100.0%) over 1296bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1005/1017 (98.8%) over 1019bp for offset 0 <== THIS IS REAL YIL022W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL022W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1699 (0.4%). Conflicting: 8/1699 (0.5%). NoInfo: 5/1699 (0.3%). Certain keep: 1679/1699 (98.8%) ########################## YIL021W (957bp = 319AA) has 6 hits (RPB3) 45 kDa subunit of RNA polymerase II Spar (test2) orthologous hit at 93% f956/956 (100.0%) over 956bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f955/955 (100.0%) over 955bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f953/955 (99.8%) over 955bp for offset 0 <== THIS IS REAL YIL021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1700 (0.4%). Conflicting: 8/1700 (0.5%). NoInfo: 5/1700 (0.3%). Certain keep: 1680/1700 (98.8%) ########################## YIL020C (786bp = 262AA) has 6 hits (HIS6) phosphoribosyl-5-amino-1-phosphoribosy.. isomerase (115) Spar (test2) orthologous hit at 90% f786/786 (100.0%) over 786bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f780/785 (99.4%) over 786bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f768/783 (98.1%) over 786bp for offset 0 <== THIS IS REAL YIL020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1701 (0.4%). Conflicting: 8/1701 (0.5%). NoInfo: 5/1701 (0.3%). Certain keep: 1681/1701 (98.8%) ########################## YIL017C (2766bp = 922AA) has 53 hits (VID28) vacuole import and degradation Spar (test2) orthologous hit at 89% f2754/2762 (99.7%) over 2766bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2749/2758 (99.7%) over 2766bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2540/2561 (99.2%) over 2567bp for offset 0 <== THIS IS REAL YIL017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1702 (0.4%). Conflicting: 8/1702 (0.5%). NoInfo: 5/1702 (0.3%). Certain keep: 1682/1702 (98.8%) ########################## YIL016W (480bp = 160AA) has 7 hits (SNL1) 18.3 kD integral membrane protein Spar (test2) orthologous hit at 90% f480/480 (100.0%) over 480bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f476/477 (99.8%) over 480bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f474/479 (99.0%) over 480bp for offset 0 <== THIS IS REAL YIL016W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL016W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1703 (0.4%). Conflicting: 8/1703 (0.5%). NoInfo: 5/1703 (0.3%). Certain keep: 1683/1703 (98.8%) ########################## YIL015W (1764bp = 588AA) has 8 hits (BAR1) extracellular protease synthesized in..pha factor (130) Spar (test2) orthologous hit at 86% f1760/1763 (99.8%) over 1764bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1594/1684 (94.7%) over 1698bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f750/1546 (48.5%) over 1555bp for offset 0 Sbay (test3) Longest island has f99 at 80% over 741bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|_____|____|____|____|____|____|____|____|___| 99f 80% 741bp 96f 77% 720bp Sb365full |====================================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>....> | YIL015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1704 (0.4%). Conflicting: 8/1704 (0.5%). NoInfo: 5/1704 (0.3%). Certain keep: 1684/1704 (98.8%) ########################## YIL014W (1893bp = 631AA) has 10 hits (MNT3) Product of gene unknown Spar (test2) orthologous hit at 88% f1886/1892 (99.7%) over 1893bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f1874/1889 (99.2%) over 1891bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1717/1841 (93.3%) over 1860bp for offset 2 <== THIS IS REAL YIL014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1705 (0.4%). Conflicting: 8/1705 (0.5%). NoInfo: 5/1705 (0.3%). Certain keep: 1685/1705 (98.8%) ########################## YIL013C (4236bp = 1412AA) has 99 hits (PDR11) Putative member of the ABC family ..ansporters (104) Spar (test2) orthologous hit at 91% f4234/4235 (100.0%) over 4235bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f721/723 (99.7%) over 724bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f4176/4230 (98.7%) over 4235bp for offset 0 <== THIS IS REAL YIL013C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL013C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1706 (0.4%). Conflicting: 8/1706 (0.5%). NoInfo: 5/1706 (0.3%). Certain keep: 1686/1706 (98.8%) ########################## YIL011W (810bp = 270AA) has 583 hits (TIR3) Spar (test2) orthologous hit at 79% f669/687 (97.4%) over 692bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f605/618 (97.9%) over 626bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f675/721 (93.6%) over 740bp for offset 0 <== THIS IS REAL YIL011W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL011W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1707 (0.4%). Conflicting: 8/1707 (0.5%). NoInfo: 5/1707 (0.3%). Certain keep: 1687/1707 (98.8%) ########################## YIL010W (648bp = 216AA) has 5 hits (DOT5) involved in telomeric silencing Spar (test2) orthologous hit at 88% f648/648 (100.0%) over 648bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f634/643 (98.6%) over 645bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f632/646 (97.8%) over 648bp for offset 0 <== THIS IS REAL YIL010W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL010W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1708 (0.4%). Conflicting: 8/1708 (0.5%). NoInfo: 5/1708 (0.3%). Certain keep: 1688/1708 (98.8%) ########################## YIL009W (2085bp = 695AA) has 19 hits (FAA3) Acyl CoA synthase Spar (test2) orthologous hit at 91% f2085/2085 (100.0%) over 2085bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2085/2085 (100.0%) over 2085bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 76% f2070/2083 (99.4%) over 2085bp for offset 0 <== THIS IS REAL YIL009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1709 (0.4%). Conflicting: 8/1709 (0.5%). NoInfo: 5/1709 (0.3%). Certain keep: 1689/1709 (98.8%) ########################## YIL008W (300bp = 100AA) has 7 hits (URM1) ubiquitin-like protein Spar (test2) orthologous hit at 94% f300/300 (100.0%) over 300bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f299/299 (100.0%) over 299bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f300/300 (100.0%) over 300bp for offset 0 <== THIS IS REAL YIL008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1710 (0.4%). Conflicting: 8/1710 (0.5%). NoInfo: 5/1710 (0.3%). Certain keep: 1690/1710 (98.8%) ########################## YIL005W (2106bp = 702AA) has 16 hits (EPS1) Spar (test2) orthologous hit at 87% f2103/2105 (99.9%) over 2106bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2082/2100 (99.1%) over 2106bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2066/2097 (98.5%) over 2105bp for offset 0 <== THIS IS REAL YIL005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1711 (0.4%). Conflicting: 8/1711 (0.5%). NoInfo: 5/1711 (0.3%). Certain keep: 1691/1711 (98.8%) ########################## YIL003W (882bp = 294AA) has 9 hits (DRE3) Protein required for cell viability Spar (test2) orthologous hit at 90% f871/871 (100.0%) over 871bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f869/869 (100.0%) over 869bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f867/867 (100.0%) over 867bp for offset 0 <== THIS IS REAL YIL003W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL003W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1712 (0.4%). Conflicting: 8/1712 (0.5%). NoInfo: 5/1712 (0.3%). Certain keep: 1692/1712 (98.8%) ########################## YIL002C (2841bp = 947AA) has 19 hits (INP51) phosphatidylinositol 4,5-bisphospha..hosphatase (96) Spar (test2) orthologous hit at 92% f2841/2841 (100.0%) over 2841bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2841/2841 (100.0%) over 2841bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2835/2839 (99.9%) over 2841bp for offset 0 <== THIS IS REAL YIL002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIL002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1713 (0.4%). Conflicting: 8/1713 (0.5%). NoInfo: 5/1713 (0.3%). Certain keep: 1693/1713 (98.8%) ########################## YIR001C (753bp = 251AA) has 9 hits (SGN1) Contains one RNA recognition (RRM) domain Spar (test2) orthologous hit at 88% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f725/750 (96.7%) over 753bp for offset 0 <== THIS IS REAL YIR001C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR001C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1714 (0.4%). Conflicting: 8/1714 (0.5%). NoInfo: 5/1714 (0.3%). Certain keep: 1694/1714 (98.8%) ########################## YIR002C (2982bp = 994AA) has 31 hits (MPH1) Mutator PHenotype; Similar to ATP-de.. helicases (101) Spar (test2) orthologous hit at 89% f2955/2977 (99.3%) over 2982bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2909/2968 (98.0%) over 2982bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2905/2968 (97.9%) over 2982bp for offset 0 <== THIS IS REAL YIR002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1715 (0.4%). Conflicting: 8/1715 (0.5%). NoInfo: 5/1715 (0.3%). Certain keep: 1695/1715 (98.8%) ########################## YIR004W (1299bp = 433AA) has 80 hits (DJP1) involved in peroxisome biogenesis Spar (test2) orthologous hit at 89% f1299/1299 (100.0%) over 1299bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1299/1299 (100.0%) over 1299bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1277/1292 (98.8%) over 1299bp for offset 0 <== THIS IS REAL YIR004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1716 (0.4%). Conflicting: 8/1716 (0.5%). NoInfo: 5/1716 (0.3%). Certain keep: 1696/1716 (98.8%) ########################## YIR005W (447bp = 149AA) has 7 hits (IST3) U2 snRNP associated protein Spar (test2) orthologous hit at 89% f446/447 (99.8%) over 447bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f436/446 (97.8%) over 447bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f410/421 (97.4%) over 423bp for offset 1 <== THIS IS REAL YIR005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1717 (0.4%). Conflicting: 8/1717 (0.5%). NoInfo: 5/1717 (0.3%). Certain keep: 1697/1717 (98.8%) ########################## YIR006C (4443bp = 1481AA) has 203 hits (PAN1) polyA-specific ribonuclease Spar (test2) orthologous hit at 86% f2518/2559 (98.4%) over 2567bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f2010/2112 (95.2%) over 2134bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f2391/2817 (84.9%) over 2886bp for offset 0 Sbay (test3) Longest island has f98 at 80% over 1945bp <== THIS IS REAL 0 1020304050607080901k1k1k1k1k1k1k1k1k1k2k2k2k2k2k2k2k2k2k2k3k3k3k3k3k3k3k3k3k 3k4k4k4k4k44k |_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|| 98f 80% 1945bp Sb363full |======================================>..................> | YIR006C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR006C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1718 (0.4%). Conflicting: 8/1718 (0.5%). NoInfo: 5/1718 (0.3%). Certain keep: 1698/1718 (98.8%) ########################## YIR008C (1230bp = 410AA) has 7 hits (PRI1) p48 polypeptide of DNA primase Spar (test2) orthologous hit at 91% f1230/1230 (100.0%) over 1230bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1227/1229 (99.8%) over 1230bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1230/1230 (100.0%) over 1230bp for offset 0 <== THIS IS REAL YIR008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1719 (0.4%). Conflicting: 8/1719 (0.5%). NoInfo: 5/1719 (0.3%). Certain keep: 1699/1719 (98.8%) ########################## YIR009W (336bp = 112AA) has 3 hits (MSL1) encodes YU2B, a component of yeast U2 snRNP Spar (test2) orthologous hit at 92% f336/336 (100.0%) over 336bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f336/336 (100.0%) over 336bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f336/336 (100.0%) over 336bp for offset 0 <== THIS IS REAL YIR009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1720 (0.4%). Conflicting: 8/1720 (0.5%). NoInfo: 5/1720 (0.3%). Certain keep: 1700/1720 (98.8%) ########################## YIR010W (1731bp = 577AA) has 92 hits (DSN1) YIR010W Spar (test2) orthologous hit at 89% f1347/1357 (99.3%) over 1361bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1323/1332 (99.3%) over 1334bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1138/1324 (86.0%) over 1346bp for offset 0 Sbay (test3) Longest island has f95 at 80% over 1073bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k1k |____|____|____|____|____|_____|____|____|____|____|_____|____|____|____|____|_____|____|_| 95f 80% 1073bp Sb363full |..............|======================================================|> YIR010W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR010W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1721 (0.4%). Conflicting: 8/1721 (0.5%). NoInfo: 5/1721 (0.3%). Certain keep: 1701/1721 (98.8%) ########################## YIR011C (960bp = 320AA) has 7 hits (STS1) (putative) involved in control rRNA st.. transport (109) Spar (test2) orthologous hit at 91% f956/957 (99.9%) over 960bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f951/956 (99.5%) over 960bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f937/947 (98.9%) over 960bp for offset 0 <== THIS IS REAL YIR011C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR011C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1722 (0.4%). Conflicting: 8/1722 (0.5%). NoInfo: 5/1722 (0.3%). Certain keep: 1702/1722 (98.8%) ########################## YIR012W (1296bp = 432AA) has 25 hits (SQT1) contains multiple WD repeats and int..two hybrid (111) Spar (test2) orthologous hit at 90% f1293/1293 (100.0%) over 1296bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1285/1293 (99.4%) over 1296bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1271/1293 (98.3%) over 1296bp for offset 0 <== THIS IS REAL YIR012W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR012W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1723 (0.4%). Conflicting: 8/1723 (0.5%). NoInfo: 5/1723 (0.3%). Certain keep: 1703/1723 (98.8%) ########################## YIR013C (366bp = 122AA) has 9 hits (GAT4) very short and so far mRNA can't be detected Spar (test2) orthologous hit at 90% f366/366 (100.0%) over 366bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f362/363 (99.7%) over 366bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f347/359 (96.7%) over 366bp for offset 0 <== THIS IS REAL YIR013C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR013C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1724 (0.4%). Conflicting: 8/1724 (0.5%). NoInfo: 5/1724 (0.3%). Certain keep: 1704/1724 (98.8%) ########################## YIR015W (435bp = 145AA) has 5 hits (RPR2) an integral subunit of RNase P but not RNase MRP Spar (test2) orthologous hit at 85% f435/435 (100.0%) over 435bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f424/432 (98.1%) over 435bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f265/294 (90.1%) over 298bp for offset 0 <== THIS IS REAL YIR015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1725 (0.4%). Conflicting: 8/1725 (0.5%). NoInfo: 5/1725 (0.3%). Certain keep: 1705/1725 (98.8%) ########################## YIR017C (564bp = 188AA) has 9 hits (MET28) transcriptional activator in the Cbf1..8p complex (102) Spar (test2) orthologous hit at 92% f562/562 (100.0%) over 562bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f524/556 (94.2%) over 561bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f466/489 (95.3%) over 492bp for offset 2 <== THIS IS REAL YIR017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1726 (0.4%). Conflicting: 8/1726 (0.5%). NoInfo: 5/1726 (0.3%). Certain keep: 1706/1726 (98.8%) ########################## YIR018W (738bp = 246AA) has 5 hits (YAP5) bZIP transcription factor Spar (test2) orthologous hit at 88% f734/737 (99.6%) over 738bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f476/480 (99.2%) over 481bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f707/729 (97.0%) over 738bp for offset 0 <== THIS IS REAL YIR018W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR018W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1727 (0.4%). Conflicting: 8/1727 (0.5%). NoInfo: 5/1727 (0.3%). Certain keep: 1707/1727 (98.8%) ########################## YIR019C (4104bp = 1368AA) (tdist=46.2k) has 347 hits (MUC1) cell surface floccul..l proteins (162) Spar (test2) orthologous hit at 73% f2016/2490 (81.0%) over 2566bp for offset 1 Spar (test3) Longest island has f99 at 85% over 974bp <== THIS IS REAL Smik (test2) orthologous hit at 75% f994/1097 (90.6%) over 1121bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 58% f1536/2367 (64.9%) over 2479bp for offset 0 Sbay (test3) Longest island has f87 at 75% over 354bp Sbay (test2) orthologous hit at 56% f1424/2316 (61.5%) over 2455bp for offset 0 Sbay (test3) Longest island has f81 at 67% over 206bp Sbay (test2) orthologous hit at 58% f1435/2256 (63.6%) over 2371bp for offset 0 Sbay (test3) Longest island has f97 at 74% over 321bp <== THIS IS REAL 0 10203040500607080901k 1k1k1k1k1k 1k1k1k1k2k 2k2k2k2k2k 2k2k2k2k3k3k 3k3k3k3k3k 3k3k3k4k44k |_|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|_|__|_|_|_|_|__|_|_|_|_|| 93f 85% 542bp 99f 85% 974bp Sp28brk |.....|xxxxxxxxxxx>.............|xxxxxxxxxxxxxxxxxxxx>...>| 80f 65% 2290f 68% 111bp 97f 587f 75Sb362brk |====>....|=>...............................|=>..|=====|=> 81f 67% 206bp 72f 57% 138667f 61% 148bp 82f 55% 188bp Sb362brk |====>........|==>......|=|===>............|===>......> | 97f 74% 321bp Sb362brk |...........................................|======>> | YIR019C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR019C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1728 (0.4%). Conflicting: 8/1728 (0.5%). NoInfo: 5/1728 (0.3%). Certain keep: 1708/1728 (98.8%) ########################## YIR021W (1092bp = 364AA) (tdist=41.5k) has 5 hits (MRS1) mitochondrial RNA splicing Spar (test2) orthologous hit at 87% f1092/1092 (100.0%) over 1092bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1092/1092 (100.0%) over 1092bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1045/1074 (97.3%) over 1085bp for offset 0 <== THIS IS REAL YIR021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1729 (0.4%). Conflicting: 8/1729 (0.5%). NoInfo: 5/1729 (0.3%). Certain keep: 1709/1729 (98.8%) ########################## YIR022W (504bp = 168AA) (tdist=40.6k) has 5 hits (SEC11) signal peptidase subunit Spar (test2) orthologous hit at 92% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f503/503 (100.0%) over 503bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL YIR022W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR022W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1730 (0.4%). Conflicting: 8/1730 (0.5%). NoInfo: 5/1730 (0.3%). Certain keep: 1710/1730 (98.8%) ########################## YIR023W (2913bp = 971AA) (tdist=37.1k) has 840 hits (DAL81) Transcriptional acti..nal region (211) Spar (test2) orthologous hit at 83% f2570/2811 (91.4%) over 2848bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2243/2302 (97.4%) over 2307bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2495/2773 (90.0%) over 2811bp for offset 0 Sbay (test3) Longest island has f98 at 81% over 2323bp <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 22k |__|__|__|__|__|__|__|__|__|__|__|___|__|__|__|__|__|__|__|__|__|__|___|__|__|__|__|__|__|| 98f 81% 2323bp Sb951full |...............|======================================================================|> YIR023W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR023W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1731 (0.4%). Conflicting: 8/1731 (0.5%). NoInfo: 5/1731 (0.3%). Certain keep: 1711/1731 (98.8%) ########################## YIR024C (651bp = 217AA) (tdist=36.3k) has 23 hits (GIF1) (putative) involved in ..le control (98) Spar (test2) orthologous hit at 88% f648/648 (100.0%) over 651bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f631/645 (97.8%) over 650bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f639/644 (99.2%) over 651bp for offset 0 <== THIS IS REAL YIR024C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR024C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1732 (0.4%). Conflicting: 8/1732 (0.5%). NoInfo: 5/1732 (0.3%). Certain keep: 1712/1732 (98.8%) ########################## YIR025W (1107bp = 369AA) (tdist=35.1k) has 26 hits (MND2) needed for Meiotic Nuc..r Division (93) Spar (test2) orthologous hit at 90% f937/942 (99.5%) over 946bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f919/1086 (84.6%) over 1106bp for offset 0 Smik (test3) Longest island has f96 at 82% over 650bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f989/1087 (91.0%) over 1106bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 11k |_______|_______|_______|_______|_______|_______|_______|________|_______|_______|_______|| 96f 82% 650bp Sm944full |===================================================>....................................>| YIR025W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR025W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1733 (0.4%). Conflicting: 8/1733 (0.5%). NoInfo: 5/1733 (0.3%). Certain keep: 1713/1733 (98.8%) ########################## YIR026C (1095bp = 365AA) (tdist=33.9k) has 6 hits (YVH1) nitrogen starvation-ind..hosphatase (104) Spar (test2) orthologous hit at 91% f1095/1095 (100.0%) over 1095bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1089/1094 (99.5%) over 1095bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1088/1094 (99.5%) over 1095bp for offset 0 <== THIS IS REAL YIR026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1734 (0.4%). Conflicting: 8/1734 (0.5%). NoInfo: 5/1734 (0.3%). Certain keep: 1714/1734 (98.8%) ########################## YIR027C (1383bp = 461AA) (tdist=32.2k) has 7 hits (DAL1) allantoinase Spar (test2) orthologous hit at 88% f1375/1381 (99.6%) over 1383bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1383/1383 (100.0%) over 1383bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f771/771 (100.0%) over 771bp for offset 0 <== THIS IS REAL YIR027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1735 (0.4%). Conflicting: 8/1735 (0.5%). NoInfo: 5/1735 (0.3%). Certain keep: 1715/1735 (98.8%) ########################## YIR028W (1908bp = 636AA) (tdist=29.5k) has 15 hits (DAL4) allantoin permease Spar (test2) orthologous hit at 92% f1908/1908 (100.0%) over 1908bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1902/1907 (99.7%) over 1908bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1903/1907 (99.8%) over 1908bp for offset 0 <== THIS IS REAL YIR028W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR028W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1736 (0.4%). Conflicting: 8/1736 (0.5%). NoInfo: 5/1736 (0.3%). Certain keep: 1716/1736 (98.8%) ########################## YIR029W (1032bp = 344AA) (tdist=28.0k) has 5 hits (DAL2) allantoicase Spar (test2) orthologous hit at 90% f1032/1032 (100.0%) over 1032bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1032/1032 (100.0%) over 1032bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1032/1032 (100.0%) over 1032bp for offset 0 <== THIS IS REAL YIR029W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR029W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1737 (0.4%). Conflicting: 8/1737 (0.5%). NoInfo: 5/1737 (0.3%). Certain keep: 1717/1737 (98.8%) ########################## YIR030C (735bp = 245AA) (tdist=27.1k) has 5 hits (DCG1) Product of gene unknown Spar (test2) orthologous hit at 87% f729/733 (99.5%) over 734bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f716/732 (97.8%) over 735bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f711/730 (97.4%) over 734bp for offset 0 <== THIS IS REAL YIR030C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR030C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1738 (0.4%). Conflicting: 8/1738 (0.5%). NoInfo: 5/1738 (0.3%). Certain keep: 1718/1738 (98.8%) ########################## YIR031C (1665bp = 555AA) (tdist=25.2k) has 8 hits (DAL7) Malate synthase 2 Spar (test2) orthologous hit at 91% f1665/1665 (100.0%) over 1665bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1665/1665 (100.0%) over 1665bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1662/1664 (99.9%) over 1665bp for offset 0 <== THIS IS REAL YIR031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1739 (0.4%). Conflicting: 8/1739 (0.5%). NoInfo: 5/1739 (0.3%). Certain keep: 1719/1739 (98.8%) ########################## YIR032C (588bp = 196AA) (tdist=24.2k) has 5 hits (DAL3) ureidoglycolate hydrolase Spar (test2) orthologous hit at 88% f587/587 (100.0%) over 587bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f587/587 (100.0%) over 587bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f587/587 (100.0%) over 587bp for offset 0 <== THIS IS REAL YIR032C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR032C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1740 (0.4%). Conflicting: 8/1740 (0.5%). NoInfo: 5/1740 (0.3%). Certain keep: 1720/1740 (98.9%) ########################## YIR033W (3342bp = 1114AA) (tdist=20.4k) has 37 hits (MGA2) Product of gene unknown Spar (test2) orthologous hit at 90% f3342/3342 (100.0%) over 3342bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f3075/3302 (93.1%) over 3341bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2534/2679 (94.6%) over 2708bp for offset 0 <== THIS IS REAL YIR033W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR033W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1741 (0.4%). Conflicting: 8/1741 (0.5%). NoInfo: 5/1741 (0.3%). Certain keep: 1721/1741 (98.9%) ########################## YIR034C (1122bp = 374AA) (tdist=19.1k) has 5 hits (LYS1) saccharopine dehydrogenase Spar (test2) orthologous hit at 91% f1122/1122 (100.0%) over 1122bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1122/1122 (100.0%) over 1122bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1122/1122 (100.0%) over 1122bp for offset 0 <== THIS IS REAL YIR034C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR034C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1742 (0.4%). Conflicting: 8/1742 (0.5%). NoInfo: 5/1742 (0.3%). Certain keep: 1722/1742 (98.9%) ########################## YIR037W (492bp = 164AA) (tdist=16.2k) has 13 hits (HYR1) putative glutathione-peroxidase Spar (test2) orthologous hit at 92% f492/492 (100.0%) over 492bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f492/492 (100.0%) over 492bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f491/491 (100.0%) over 491bp for offset 0 <== THIS IS REAL YIR037W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR037W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1743 (0.4%). Conflicting: 8/1743 (0.5%). NoInfo: 5/1743 (0.3%). Certain keep: 1723/1743 (98.9%) ########################## YIR038C (705bp = 235AA) (tdist=15.3k) has 6 hits (GTT1) Glutathione transferase Spar (test2) orthologous hit at 91% f705/705 (100.0%) over 705bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f697/704 (99.0%) over 705bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f705/705 (100.0%) over 705bp for offset 0 <== THIS IS REAL YIR038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1744 (0.4%). Conflicting: 8/1744 (0.5%). NoInfo: 5/1744 (0.3%). Certain keep: 1724/1744 (98.9%) ########################## YIR039C (1614bp = 538AA) (tdist=7.7k) has 48 hits (YPS6) GPI-anchored aspartic protease Spar (test2) orthologous hit at 79% f456/674 (67.7%) over 678bp for offset 0 Spar (test3) Longest island has f98 at 80% over 464bp <== THIS IS REAL Smik (test2) non-orthologous hit at 71% f548/1034 (53.0%) over 1051bp for offset 2 Smik (test3) Longest island has f95 at 74% over 534bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 75% f1555/1602 (97.1%) over 1614bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 11k |____|_____|____|_____|____|_____|_____|____|_____|____|_____|____|_____|_____|____|_____|| 98f 80% 464bp Sp29full |...........|ooooooooooooooooooooooooo| 92f 73% 361bp 95f 74% 534bp Sm633full |......|xxxxxxxxxxxxxxxxxxx|=============================>.| YIR039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YIR039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1745 (0.4%). Conflicting: 8/1745 (0.5%). NoInfo: 5/1745 (0.3%). Certain keep: 1725/1745 (98.9%) ########################## YJL223C (363bp = 121AA) (tdist=8.7k) has 126 hits (PAU1) member of the seripaupe..class PAU) (124) Spar (test2) non-orthologous hit at 96% f363/363 (100.0%) over 363bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 90% f363/363 (100.0%) over 363bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 90% f244/363 (67.2%) over 363bp for offset 1 Sbay (test3) Longest island has f100 at 93% over 243bp Sbay (test2) non-orthologous hit at 89% f363/363 (100.0%) over 363bp for offset 0 <== THIS IS REAL 0 100 200 300 363 |_______________________|________________________|________________________|_______________| 100f 93% 243bp Sb426full |..............................|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooo|> YJL223C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL223C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1746 (0.4%). Conflicting: 8/1746 (0.5%). NoInfo: 5/1746 (0.3%). Certain keep: 1726/1746 (98.9%) ########################## YJL222W (4650bp = 1550AA) (tdist=11.4k) has 87 hits (VTH2) potential membrane gl..1 and Pep1 (130) Spar (test2) non-orthologous hit at 78% f3603/3758 (95.9%) over 3779bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 74% f2101/2239 (93.8%) over 2258bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 76% f1478/1501 (98.5%) over 1504bp for offset 0 <== THIS IS REAL YJL222W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL222W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1747 (0.4%). Conflicting: 8/1747 (0.5%). NoInfo: 5/1747 (0.3%). Certain keep: 1727/1747 (98.9%) ########################## YJL221C (1770bp = 590AA) (tdist=16.7k) has 63 hits (FSP2) homology to maltase(al..ucosidase) (98) Flanking ORFs are: YJL223C and YJL221C. YJL221C skipped ########################## YJL219W (1704bp = 568AA) (tdist=19.4k) has 108 hits (HXT9) hexose permease Spar (test2) orthologous hit at 67% f1450/1532 (94.6%) over 1554bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1698/1703 (99.7%) over 1704bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 69% f1556/1657 (93.9%) over 1679bp for offset 0 <== THIS IS REAL YJL219W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL219W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1748 (0.4%). Conflicting: 8/1748 (0.5%). NoInfo: 5/1748 (0.3%). Certain keep: 1728/1748 (98.9%) ########################## YJL214W (1710bp = 570AA) (tdist=26.8k) has 96 hits (HXT8) hexose permease Spar (test2) orthologous hit at 85% f1678/1706 (98.4%) over 1710bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1634/1634 (100.0%) over 1634bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 72% f1510/1593 (94.8%) over 1608bp for offset 0 <== THIS IS REAL YJL214W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL214W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1749 (0.4%). Conflicting: 8/1749 (0.5%). NoInfo: 5/1749 (0.3%). Certain keep: 1729/1749 (98.9%) ########################## YJL212C (2400bp = 800AA) (tdist=33.8k) has 15 hits (OPT1) Oligopeptide transport..nkephalin. (191) Spar (test2) orthologous hit at 90% f2399/2399 (100.0%) over 2399bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2400/2400 (100.0%) over 2400bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2393/2399 (99.7%) over 2400bp for offset 0 <== THIS IS REAL YJL212C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL212C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1750 (0.4%). Conflicting: 8/1750 (0.5%). NoInfo: 5/1750 (0.3%). Certain keep: 1730/1750 (98.9%) ########################## YJL210W (816bp = 272AA) (tdist=36.9k) has 3 hits (PEX2) CH3HC4 zinc-binding inte..ne protein (113) Flanking ORFs are: YJL213W and YJL211C. YJL210W skipped ########################## YJL209W (1965bp = 655AA) (tdist=38.0k) has 8 hits (CBP1) involved in control of ..stablility (95) Spar (test2) orthologous hit at 88% f1965/1965 (100.0%) over 1965bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1938/1955 (99.1%) over 1965bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1932/1958 (98.7%) over 1965bp for offset 0 <== THIS IS REAL YJL209W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL209W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1751 (0.4%). Conflicting: 8/1751 (0.5%). NoInfo: 5/1751 (0.3%). Certain keep: 1731/1751 (98.9%) ########################## YJL208C (990bp = 330AA) (tdist=40.1k) has 6 hits (NUC1) mitochondrial nuclease Spar (test2) orthologous hit at 90% f990/990 (100.0%) over 990bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f983/983 (100.0%) over 983bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f975/982 (99.3%) over 983bp for offset 0 <== THIS IS REAL YJL208C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL208C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1752 (0.4%). Conflicting: 8/1752 (0.5%). NoInfo: 5/1752 (0.3%). Certain keep: 1732/1752 (98.9%) ########################## YJL204C (2523bp = 841AA) has 54 hits (RCY1) Spar (test2) orthologous hit at 89% f2523/2523 (100.0%) over 2523bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2506/2516 (99.6%) over 2523bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2489/2516 (98.9%) over 2523bp for offset 0 <== THIS IS REAL YJL204C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL204C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1753 (0.4%). Conflicting: 8/1753 (0.5%). NoInfo: 5/1753 (0.3%). Certain keep: 1733/1753 (98.9%) ########################## YJL203W (843bp = 281AA) has 10 hits (PRP21) RNA splicing factor Flanking ORFs are: YJL205C-A and YJL203W. YJL203W skipped ########################## YJL201W (1800bp = 600AA) has 18 hits (ECM25) (putative) involved in cell wall biogenesis Spar (test2) orthologous hit at 91% f1797/1797 (100.0%) over 1800bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1794/1797 (99.8%) over 1800bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1796/1797 (99.9%) over 1800bp for offset 0 <== THIS IS REAL YJL201W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL201W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1754 (0.4%). Conflicting: 8/1754 (0.5%). NoInfo: 5/1754 (0.3%). Certain keep: 1734/1754 (98.9%) ########################## YJL198W (2646bp = 882AA) has 27 hits (PHO90) Low-affinity phosphate transporter Spar (test2) orthologous hit at 91% f2641/2645 (99.8%) over 2646bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2635/2641 (99.8%) over 2646bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f2029/2033 (99.8%) over 2034bp for offset 0 <== THIS IS REAL YJL198W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL198W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1755 (0.4%). Conflicting: 8/1755 (0.5%). NoInfo: 5/1755 (0.3%). Certain keep: 1735/1755 (98.9%) ########################## YJL197W (3765bp = 1255AA) has 45 hits (UBP12) ubiquitin carboxyl-terminal hydrolase Spar (test2) orthologous hit at 88% f3740/3760 (99.5%) over 3765bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2693/2728 (98.7%) over 2739bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2580/2609 (98.9%) over 2615bp for offset 0 <== THIS IS REAL YJL197W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL197W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1756 (0.4%). Conflicting: 8/1756 (0.5%). NoInfo: 5/1756 (0.3%). Certain keep: 1736/1756 (98.9%) ########################## YJL196C (933bp = 311AA) has 14 hits (ELO1) Elongation enzyme 1 Spar (test2) orthologous hit at 92% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f910/924 (98.5%) over 926bp for offset 0 <== THIS IS REAL YJL196C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL196C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1757 (0.4%). Conflicting: 8/1757 (0.5%). NoInfo: 5/1757 (0.3%). Certain keep: 1737/1757 (98.9%) ########################## YJL194W (1542bp = 514AA) has 3 hits (CDC6) pre-initiation complex component Flanking ORFs are: YJL197W and YJL195C. YJL194W skipped ########################## YJL190C (393bp = 131AA) has 12 hits (RPS22A) Ribosomal protein S22A (S24A) (rp50) (YS22) Spar (test2) orthologous hit at 99% f393/393 (100.0%) over 393bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 98% f393/393 (100.0%) over 393bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f393/393 (100.0%) over 393bp for offset 0 <== THIS IS REAL YJL190C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL190C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1758 (0.4%). Conflicting: 8/1758 (0.5%). NoInfo: 5/1758 (0.3%). Certain keep: 1738/1758 (98.9%) ########################## YJL188C (309bp = 103AA) has 17 hits (BUD19) Flanking ORFs are: YJL191W and YJL189W. YJL188C skipped ########################## YJL187C (2460bp = 820AA) has 76 hits (SWE1) protein kinase homolog Spar (test2) orthologous hit at 89% f2458/2460 (99.9%) over 2460bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2181/2197 (99.3%) over 2206bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1921/1974 (97.3%) over 1981bp for offset 0 <== THIS IS REAL YJL187C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL187C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1759 (0.4%). Conflicting: 8/1759 (0.5%). NoInfo: 5/1759 (0.3%). Certain keep: 1739/1759 (98.9%) ########################## YJL186W (1761bp = 587AA) has 16 hits (MNN5) putative Golgi alpha-1,2-mannosyltransferase Spar (test2) orthologous hit at 88% f1761/1761 (100.0%) over 1761bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1749/1758 (99.5%) over 1761bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1741/1758 (99.0%) over 1761bp for offset 0 <== THIS IS REAL YJL186W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL186W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1760 (0.4%). Conflicting: 8/1760 (0.5%). NoInfo: 5/1760 (0.3%). Certain keep: 1740/1760 (98.9%) ########################## YJL183W (1269bp = 423AA) has 10 hits (MNN11) mannosyltransferase complex component Spar (test2) orthologous hit at 91% f1267/1267 (100.0%) over 1267bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1253/1261 (99.4%) over 1263bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1267/1267 (100.0%) over 1267bp for offset 0 <== THIS IS REAL YJL183W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL183W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1761 (0.4%). Conflicting: 8/1761 (0.5%). NoInfo: 5/1761 (0.3%). Certain keep: 1741/1761 (98.9%) ########################## YJL180C (978bp = 326AA) has 6 hits (ATP12) (putative) involved F1F0-ATPase compl..x assembly (91) Spar (test2) orthologous hit at 86% f974/977 (99.7%) over 978bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f978/978 (100.0%) over 978bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f961/975 (98.6%) over 978bp for offset 0 <== THIS IS REAL YJL180C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL180C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1762 (0.4%). Conflicting: 8/1762 (0.5%). NoInfo: 5/1762 (0.3%). Certain keep: 1742/1762 (98.9%) ########################## YJL179W (330bp = 110AA) has 22 hits (PFD1) bovine prefoldin subunit 1 homolog (putative) Spar (test2) orthologous hit at 92% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL YJL179W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL179W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1763 (0.4%). Conflicting: 8/1763 (0.5%). NoInfo: 5/1763 (0.3%). Certain keep: 1743/1763 (98.9%) ########################## YJL176C (2478bp = 826AA) has 79 hits (SWI3) transcription factor Flanking ORFs are: YJL180C and YJL178C. YJL176C skipped ########################## YJL174W (831bp = 277AA) has 9 hits (KRE9) involved in beta-1,6-glucan assembly Spar (test2) orthologous hit at 89% f831/831 (100.0%) over 831bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f813/828 (98.2%) over 831bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f822/830 (99.0%) over 831bp for offset 0 <== THIS IS REAL YJL174W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL174W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1764 (0.4%). Conflicting: 8/1764 (0.5%). NoInfo: 5/1764 (0.3%). Certain keep: 1744/1764 (98.9%) ########################## YJL173C (369bp = 123AA) has 7 hits (RFA3) subunit 3 of replication factor-A Spar (test2) orthologous hit at 91% f369/369 (100.0%) over 369bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f367/367 (100.0%) over 367bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f369/369 (100.0%) over 369bp for offset 0 <== THIS IS REAL YJL173C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL173C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1765 (0.4%). Conflicting: 8/1765 (0.5%). NoInfo: 5/1765 (0.3%). Certain keep: 1745/1765 (98.9%) ########################## YJL172W (1731bp = 577AA) has 12 hits (CPS1) carboxypeptidase yscS Spar (test2) orthologous hit at 92% f1731/1731 (100.0%) over 1731bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f986/1002 (98.4%) over 1008bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1716/1729 (99.2%) over 1731bp for offset 0 <== THIS IS REAL YJL172W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL172W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1766 (0.4%). Conflicting: 8/1766 (0.5%). NoInfo: 5/1766 (0.3%). Certain keep: 1746/1766 (98.9%) ########################## YJL170C (552bp = 184AA) has 4 hits (ASG7) An a-specific gene that is induced to ..pha factor (121) Spar (test2) orthologous hit at 90% f552/552 (100.0%) over 552bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f544/552 (98.6%) over 552bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f316/332 (95.2%) over 335bp for offset 1 <== THIS IS REAL YJL170C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL170C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1767 (0.4%). Conflicting: 8/1767 (0.5%). NoInfo: 5/1767 (0.3%). Certain keep: 1747/1767 (98.9%) ########################## YJL168C (2202bp = 734AA) has 27 hits (SET2) transcription factor containing a SET domain Flanking ORFs are: YJL171C and YJL169W. YJL168C skipped ########################## YJL167W (1059bp = 353AA) has 5 hits (ERG20) Farnesyl diphosphate synthetase (FPP..ynthetase) (92) Spar (test2) orthologous hit at 93% f1058/1058 (100.0%) over 1058bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1058/1058 (100.0%) over 1058bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1058/1058 (100.0%) over 1058bp for offset 0 <== THIS IS REAL YJL167W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL167W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1768 (0.4%). Conflicting: 8/1768 (0.5%). NoInfo: 5/1768 (0.3%). Certain keep: 1748/1768 (98.9%) ########################## YJL166W (285bp = 95AA) has 7 hits (QCR8) Ubiquinol cytochrome-c reductase subuni..a protein) (100) Spar (test2) orthologous hit at 93% f285/285 (100.0%) over 285bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f285/285 (100.0%) over 285bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f284/284 (100.0%) over 284bp for offset 0 <== THIS IS REAL YJL166W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL166W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1769 (0.4%). Conflicting: 8/1769 (0.5%). NoInfo: 5/1769 (0.3%). Certain keep: 1749/1769 (98.9%) ########################## YJL165C (2568bp = 856AA) has 117 hits (HAL5) (putative) protein kinase Spar (test2) orthologous hit at 90% f2565/2565 (100.0%) over 2568bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1446/1456 (99.3%) over 1457bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1694/1724 (98.3%) over 1736bp for offset 0 <== THIS IS REAL YJL165C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL165C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1770 (0.4%). Conflicting: 8/1770 (0.5%). NoInfo: 5/1770 (0.3%). Certain keep: 1750/1770 (98.9%) ########################## YJL164C (1194bp = 398AA) has 81 hits (TPK1) putative catalytic subunit of cAMP-d..ein kinase (103) Spar (test2) orthologous hit at 91% f1173/1193 (98.3%) over 1194bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1175/1193 (98.5%) over 1194bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1128/1155 (97.7%) over 1157bp for offset 0 <== THIS IS REAL YJL164C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL164C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1771 (0.4%). Conflicting: 8/1771 (0.5%). NoInfo: 5/1771 (0.3%). Certain keep: 1751/1771 (98.9%) ########################## YJL159W (933bp = 311AA) has 211 hits (HSP150) Heat shock protein, secretory glycoprotein Spar (test2) orthologous hit at 79% f700/770 (90.9%) over 776bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 64% f527/670 (78.7%) over 690bp for offset 0 Smik (test3) Longest island has f99 at 78% over 250bp Smik (test2) orthologous hit at 69% f561/623 (90.0%) over 641bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 64% f401/502 (79.9%) over 529bp for offset 0 Sbay (test3) Longest island has f95 at 81% over 223bp Sbay (test2) orthologous hit at 71% f351/393 (89.3%) over 413bp for offset 0 Sbay (test3) Longest island has f88 at 76% over 305bp Sbay (test2) orthologous hit at 68% f334/388 (86.1%) over 404bp for offset 0 Sbay (test3) Longest island has f81 at 68% over 399bp Sbay (test2) orthologous hit at 56% f293/424 (69.1%) over 444bp for offset 0 Sbay (test3) Longest island has f83 at 65% over 150bp Sbay (test2) orthologous hit at 63% f196/388 (50.5%) over 398bp for offset 0 Sbay (test3) Longest island has f83 at 57% over 148bp Sbay (test2) orthologous hit at 60% f235/335 (70.1%) over 354bp for offset 0 Sbay (test3) Longest island has f90 at 65% over 123bp Sbay (test2) orthologous hit at 74% f238/274 (86.9%) over 280bp for offset 0 Sbay (test3) Longest island has f95 at 80% over 223bp Sbay (test2) orthologous hit at 67% f237/270 (87.8%) over 278bp for offset 0 Sbay (test3) Longest island has f91 at 72% over 222bp Sbay (test2) orthologous hit at 59% f205/289 (70.9%) over 303bp for offset 0 Sbay (test3) Longest island has f84 at 65% over 164bp Sbay (test2) orthologous hit at 66% f201/228 (88.2%) over 241bp for offset 0 Sbay (test3) Longest island has f88 at 68% over 213bp Sbay (test2) orthologous hit at 62% f150/238 (63.0%) over 251bp for offset 2 Sbay (test3) Longest island has f100 at 78% over 79bp Sbay (test2) orthologous hit at 59% f174/234 (74.4%) over 246bp for offset 0 Sbay (test3) Longest island has f87 at 64% over 108bp Sbay (test2) orthologous hit at 67% f129/209 (61.7%) over 212bp for offset 0 Sbay (test3) Longest island has f94 at 81% over 121bp Sbay (test2) orthologous hit at 61% f85/193 (44.0%) over 206bp for offset 0 Sbay (test3) Longest island has f85 at 61% over 33bp Sbay (test2) orthologous hit at 68% f124/145 (85.5%) over 148bp for offset 0 Sbay (test3) Longest island has f100 at 73% over 116bp Sbay (test2) orthologous hit at 71% f114/130 (87.7%) over 133bp for offset 0 Sbay (test3) Longest island has f96 at 74% over 109bp Sbay (test2) orthologous hit at 65% f112/141 (79.4%) over 144bp for offset 0 Sbay (test3) Longest island has f100 at 76% over 83bp Sbay (test2) orthologous hit at 63% f92/129 (71.3%) over 141bp for offset 0 Sbay (test3) Longest island has f84 at 69% over 85bp Sbay (test2) orthologous hit at 71% f103/112 (92.0%) over 113bp for offset 0 Sbay (test3) Longest island has f90 at 71% over 114bp Sbay (test2) orthologous hit at 67% f77/94 (81.9%) over 97bp for offset 1 Sbay (test3) Longest island has f96 at 68% over 80bp Sbay (test2) orthologous hit at 81% f76/76 (100.0%) over 76bp for offset 0 Sbay (test3) Longest island has f100 at 82% over 76bp Sbay (test2) orthologous hit at 80% f76/76 (100.0%) over 76bp for offset 0 Sbay (test3) Longest island has f100 at 80% over 76bp Sbay (test2) orthologous hit at 77% f69/78 (88.5%) over 78bp for offset 1 Sbay (test3) Longest island has f100 at 78% over 69bp Sbay (test2) orthologous hit at 66% f68/79 (86.1%) over 80bp for offset 0 Sbay (test3) Longest island has f78 at 67% over 87bp Sbay (test2) orthologous hit at 79% f55/59 (93.2%) over 62bp for offset 0 Sbay (test3) Longest island has f89 at 79% over 62bp Sbay (test2) orthologous hit at 79% f55/59 (93.2%) over 62bp for offset 0 Sbay (test3) Longest island has f89 at 79% over 62bp Sbay (test2) orthologous hit at 69% f59/62 (95.2%) over 63bp for offset 2 Sbay (test3) Longest island has f100 at 69% over 59bp 0 100 200 300 400 500 600 700 800 900 933 |________|_________|________|_________|_________|________|_________|_________|________|___| 99f 78% 250bp Sm832full |............................................|=======================> | 95f 81% 223bp Sb328full |...............................|====================> | 88f 76% 305bp Sb328full |============================>.........> | 81f 68% 399bp Sb328full |..|=====================================> | 88f 81f 51% 72bp 100f 75%83f 65% 150bp Sb328full |==>|======>...........|=>.....|=============> | 83f 57% 148bp 76f 3100f 48% 100f 93% 1Sb328full |=============>|x>..|=>......|ooooooooo|> 77f 55% 44b1090f 65% 123b70f77f 60% 81bp Sb328brk |===>......|>|===========|x>|======> | 95f 80% 223bp Sb328full |====================>....> | 91f 72% 222bp Sb328full |====================>.....> | 84f 65% 164bp 101076f 51% Sb328full |==============>...|=|>|===>.> | 88f 68% 213bp 100f 79% 14bp Sb328full |===================>.|> | 100f 78%100f100f80f 55% 20bp Sb328full ||xxxxxx>|>..|xxx|=>....> | 90f 55%87f 64% 108bp 100f 65% 26bp Sb328full |====>.|==========>..|==> | 100f1100f 94f 81% 121Sb328brk |==>||=>..|oooooooooo| 100f 6885f100f 79% 33bp Sb328full |=>..|x|oo|==>......> | 10100f 73% 116bp Sb328brk |.|>|==========> | 1196f 74% 109bSb328full |||==========>| 100f 76% 101100f 60% 15bp Sb328full |=======>|>||=> | 76f84f 69% 85bp Sb328brk |..|oo|=======> | 90f 71% 114bp Sb328full |==========> | 96f 68% 100f 73% 11bp Sb328full ||xxxxxxx|> | 100f 82% 76bp Sb328full |=======> | 100f 80% 76bp Sb328full |=======> | 1100f 78% 69bp Sb328full ||ooooo> | 78f 67% 87bp Sb328full |========> | 89f 79% 62bp Sb328brk |=====> | 89f 79% 62bp Sb328brk |=====> | 100f 69% 59bp Sb328brk |=====> | YJL159W: kill: Smik Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay Sbay - keep: Spar Smik YJL159W - Conflicting. Kill (Sbay) and Keep (Spar Smik) Current total: Certain kills: 7/1772 (0.4%). Conflicting: 9/1772 (0.5%). NoInfo: 5/1772 (0.3%). Certain keep: 1751/1772 (98.8%) ########################## YJL158C (684bp = 228AA) has 72 hits (CIS3) Protein with homology to Hsp150p and .. and Pir3p (103) Spar (test2) orthologous hit at 87% f451/472 (95.6%) over 474bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f663/675 (98.2%) over 684bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f393/405 (97.0%) over 411bp for offset 0 <== THIS IS REAL YJL158C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL158C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1773 (0.4%). Conflicting: 9/1773 (0.5%). NoInfo: 5/1773 (0.3%). Certain keep: 1752/1773 (98.8%) ########################## YJL157C (2493bp = 831AA) has 9 hits (FAR1) Cdc28p kinase inhibitor Spar (test2) orthologous hit at 87% f2487/2492 (99.8%) over 2493bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2396/2486 (96.4%) over 2493bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 69% f1482/1665 (89.0%) over 1679bp for offset 0 Sbay (test3) Longest island has f97 at 73% over 1279bp <== THIS IS REAL 0 100 200300 400 500600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k |__|___|__|___|___|__|___|__|___|___|__|___|__|___|___|__|___|__|___|___|__|___|___|__|___| 92f 67% 21697f 73% 1279bp Sb329full |..|=======>..|==============================================| YJL157C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL157C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1774 (0.4%). Conflicting: 9/1774 (0.5%). NoInfo: 5/1774 (0.3%). Certain keep: 1753/1774 (98.8%) ########################## YJL156C (2064bp = 688AA) has 8 hits (SSY5) Product of gene unknown Spar (test2) orthologous hit at 90% f2055/2063 (99.6%) over 2064bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2043/2061 (99.1%) over 2064bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2018/2058 (98.1%) over 2064bp for offset 2 <== THIS IS REAL YJL156C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL156C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1775 (0.4%). Conflicting: 9/1775 (0.5%). NoInfo: 5/1775 (0.3%). Certain keep: 1754/1775 (98.8%) ########################## YJL155C (1359bp = 453AA) has 15 hits (FBP26) fructose-2,6-bisphosphatase Spar (test2) orthologous hit at 92% f1359/1359 (100.0%) over 1359bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1359/1359 (100.0%) over 1359bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1359/1359 (100.0%) over 1359bp for offset 0 <== THIS IS REAL YJL155C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL155C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1776 (0.4%). Conflicting: 9/1776 (0.5%). NoInfo: 5/1776 (0.3%). Certain keep: 1755/1776 (98.8%) ########################## YJL154C (2835bp = 945AA) has 13 hits (VPS35) retromer complex component Spar (test2) orthologous hit at 90% f2835/2835 (100.0%) over 2835bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2830/2834 (99.9%) over 2835bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2821/2831 (99.6%) over 2835bp for offset 0 <== THIS IS REAL YJL154C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL154C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1777 (0.4%). Conflicting: 9/1777 (0.5%). NoInfo: 5/1777 (0.3%). Certain keep: 1756/1777 (98.8%) ########################## YJL153C (1668bp = 556AA) has 4 hits (INO1) L-myo-inositol-1-phosphate synthase Spar (test2) orthologous hit at 89% f1633/1667 (98.0%) over 1667bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1628/1662 (98.0%) over 1665bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1436/1481 (97.0%) over 1488bp for offset 0 <== THIS IS REAL YJL153C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL153C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1778 (0.4%). Conflicting: 9/1778 (0.5%). NoInfo: 5/1778 (0.3%). Certain keep: 1757/1778 (98.8%) ########################## YJL151C (402bp = 134AA) has 8 hits (SNA3) Small integral membrane protein Flanking ORFs are: YJL154C and YJL152W. YJL151C skipped ########################## YJL148W (702bp = 234AA) has 198 hits (RPA34) unshared RNA polymerase I subunit Spar (test2) orthologous hit at 89% f702/702 (100.0%) over 702bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f692/701 (98.7%) over 702bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f673/684 (98.4%) over 684bp for offset 0 <== THIS IS REAL YJL148W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL148W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1779 (0.4%). Conflicting: 9/1779 (0.5%). NoInfo: 5/1779 (0.3%). Certain keep: 1758/1779 (98.8%) ########################## YJL146W (1410bp = 470AA) has 11 hits (IDS2) (putative) involved in meiosis Spar (test2) orthologous hit at 88% f1410/1410 (100.0%) over 1410bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1134/1136 (99.8%) over 1145bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1392/1407 (98.9%) over 1410bp for offset 0 <== THIS IS REAL YJL146W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL146W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1780 (0.4%). Conflicting: 9/1780 (0.5%). NoInfo: 5/1780 (0.3%). Certain keep: 1759/1780 (98.8%) ########################## YJL145W (885bp = 295AA) has 4 hits (SFH5) Spar (test2) orthologous hit at 88% f881/884 (99.7%) over 885bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f880/884 (99.5%) over 885bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f881/884 (99.7%) over 885bp for offset 0 <== THIS IS REAL YJL145W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL145W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1781 (0.4%). Conflicting: 9/1781 (0.5%). NoInfo: 5/1781 (0.3%). Certain keep: 1760/1781 (98.8%) ########################## YJL143W (477bp = 159AA) has 4 hits (TIM17) 16.5 kDa inner membrane protein requi..r proteins (130) Spar (test2) orthologous hit at 92% f476/476 (100.0%) over 476bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f477/477 (100.0%) over 477bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f477/477 (100.0%) over 477bp for offset 0 <== THIS IS REAL YJL143W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL143W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1782 (0.4%). Conflicting: 9/1782 (0.5%). NoInfo: 5/1782 (0.3%). Certain keep: 1761/1782 (98.8%) ########################## YJL141C (2424bp = 808AA) has 390 hits (YAK1) Serine-threonine protein kinase Flanking ORFs are: YJL144W and YJL142C. YJL141C skipped ########################## YJL140W (666bp = 222AA) has 155 hits (RPB4) fourth-largest subunit of RNA polymerase II Spar (test2) orthologous hit at 93% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f659/660 (99.8%) over 666bp for offset 0 <== THIS IS REAL YJL140W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL140W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1783 (0.4%). Conflicting: 9/1783 (0.5%). NoInfo: 5/1783 (0.3%). Certain keep: 1762/1783 (98.8%) ########################## YJL139C (1287bp = 429AA) has 33 hits (YUR1) mannosyltransferase Spar (test2) orthologous hit at 88% f1287/1287 (100.0%) over 1287bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1266/1282 (98.8%) over 1286bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1264/1281 (98.7%) over 1285bp for offset 0 <== THIS IS REAL YJL139C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL139C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1784 (0.4%). Conflicting: 9/1784 (0.5%). NoInfo: 5/1784 (0.3%). Certain keep: 1763/1784 (98.8%) ########################## YJL138C (1188bp = 396AA) has 75 hits (TIF2) translation initiation factor eIF4A Spar (test2) orthologous hit at 96% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL YJL138C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL138C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1785 (0.4%). Conflicting: 9/1785 (0.5%). NoInfo: 5/1785 (0.3%). Certain keep: 1764/1785 (98.8%) ########################## YJL137C (1143bp = 381AA) has 14 hits (GLG2) glycogen synthesis initiator Spar (test2) orthologous hit at 87% f1129/1141 (98.9%) over 1143bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1107/1136 (97.4%) over 1143bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1122/1140 (98.4%) over 1143bp for offset 0 <== THIS IS REAL YJL137C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL137C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1786 (0.4%). Conflicting: 9/1786 (0.5%). NoInfo: 5/1786 (0.3%). Certain keep: 1765/1786 (98.8%) ########################## YJL134W (1230bp = 410AA) has 10 hits (LCB3) putative plasma membrane transporter..into cells (142) Flanking ORFs are: YJL138C and YJL136C. YJL134W skipped ########################## YJL133W (945bp = 315AA) has 8 hits (MRS3) mitochondrial carrier protein Spar (test2) orthologous hit at 93% f945/945 (100.0%) over 945bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f945/945 (100.0%) over 945bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f941/944 (99.7%) over 945bp for offset 0 <== THIS IS REAL YJL133W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL133W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1787 (0.4%). Conflicting: 9/1787 (0.5%). NoInfo: 5/1787 (0.3%). Certain keep: 1766/1787 (98.8%) ########################## YJL130C (6645bp = 2215AA) has 26 hits (URA2) carbamoyl-phophate synthetase, aspa..ransferase (134) Spar (test2) orthologous hit at 92% f6641/6644 (100.0%) over 6645bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f6602/6642 (99.4%) over 6645bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f6630/6643 (99.8%) over 6645bp for offset 0 <== THIS IS REAL YJL130C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL130C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1788 (0.4%). Conflicting: 9/1788 (0.5%). NoInfo: 5/1788 (0.3%). Certain keep: 1767/1788 (98.8%) ########################## YJL129C (3708bp = 1236AA) has 256 hits (TRK1) 180 kDa high affinity potassium transporter Spar (test2) orthologous hit at 84% f1596/1706 (93.6%) over 1717bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f3111/3171 (98.1%) over 3186bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f3059/3374 (90.7%) over 3419bp for offset 0 <== THIS IS REAL YJL129C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL129C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1789 (0.4%). Conflicting: 9/1789 (0.5%). NoInfo: 5/1789 (0.3%). Certain keep: 1768/1789 (98.8%) ########################## YJL128C (2007bp = 669AA) has 29 hits (PBS2) MAP kinase kinase (MEK), may act as .. and Hog1p (130) Spar (test2) orthologous hit at 91% f2003/2006 (99.9%) over 2007bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1599/1601 (99.9%) over 1602bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f184/184 (100.0%) over 184bp for offset 0 Sbay (test3) Longest island has f100 at 84% over 184bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 22k |___|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|| 100f 84% Sb330brk |========| YJL128C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YJL128C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 7/1790 (0.4%). Conflicting: 9/1790 (0.5%). NoInfo: 5/1790 (0.3%). Certain keep: 1769/1790 (98.8%) ########################## YJL127C (1923bp = 641AA) has 13 hits (SPT10) negative transcriptional regulator Spar (test2) orthologous hit at 88% f1923/1923 (100.0%) over 1923bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1917/1921 (99.8%) over 1923bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1901/1919 (99.1%) over 1922bp for offset 0 <== THIS IS REAL YJL127C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL127C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1791 (0.4%). Conflicting: 9/1791 (0.5%). NoInfo: 5/1791 (0.3%). Certain keep: 1770/1791 (98.8%) ########################## YJL126W (924bp = 308AA) has 5 hits (NIT2) nitrilase superfamily member Spar (test2) orthologous hit at 88% f920/923 (99.7%) over 924bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f912/922 (98.9%) over 924bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f878/901 (97.4%) over 905bp for offset 0 <== THIS IS REAL YJL126W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL126W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1792 (0.4%). Conflicting: 9/1792 (0.5%). NoInfo: 5/1792 (0.3%). Certain keep: 1771/1792 (98.8%) ########################## YJL125C (1152bp = 384AA) has 7 hits (GCD14) translational repressor of GCN4 Spar (test2) orthologous hit at 90% f1152/1152 (100.0%) over 1152bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1146/1151 (99.6%) over 1152bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1147/1151 (99.7%) over 1152bp for offset 0 <== THIS IS REAL YJL125C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL125C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1793 (0.4%). Conflicting: 9/1793 (0.5%). NoInfo: 5/1793 (0.3%). Certain keep: 1772/1793 (98.8%) ########################## YJL124C (519bp = 173AA) has 6 hits (LSM1) involved in mRNA stablity Spar (test2) orthologous hit at 93% f519/519 (100.0%) over 519bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f511/518 (98.6%) over 519bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f519/519 (100.0%) over 519bp for offset 0 <== THIS IS REAL YJL124C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL124C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1794 (0.4%). Conflicting: 9/1794 (0.5%). NoInfo: 5/1794 (0.3%). Certain keep: 1773/1794 (98.8%) ########################## YJL121C (717bp = 239AA) has 4 hits (RPE1) D-ribulose-5-Phosphate 3-epimerase Flanking ORFs are: YJL125C and YJL123C. YJL121C skipped ########################## YJL117W (936bp = 312AA) has 4 hits (PHO86) Putative inorganic phosphate transporter Spar (test2) orthologous hit at 89% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f931/934 (99.7%) over 935bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f927/934 (99.3%) over 936bp for offset 0 <== THIS IS REAL YJL117W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL117W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1795 (0.4%). Conflicting: 9/1795 (0.5%). NoInfo: 5/1795 (0.3%). Certain keep: 1774/1795 (98.8%) ########################## YJL116C (1014bp = 338AA) has 14 hits (NCA3) involved in regulating expression of..e subunits (101) Spar (test2) orthologous hit at 90% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1008/1013 (99.5%) over 1014bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1012/1014 (99.8%) over 1014bp for offset 0 <== THIS IS REAL YJL116C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL116C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1796 (0.4%). Conflicting: 9/1796 (0.5%). NoInfo: 5/1796 (0.3%). Certain keep: 1775/1796 (98.8%) ########################## YJL115W (840bp = 280AA) has 1353 hits (ASF1) involved in silencing Spar (test2) orthologous hit at 90% f840/840 (100.0%) over 840bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f691/722 (95.7%) over 727bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f709/784 (90.4%) over 797bp for offset 0 <== THIS IS REAL YJL115W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL115W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1797 (0.4%). Conflicting: 9/1797 (0.5%). NoInfo: 5/1797 (0.3%). Certain keep: 1776/1797 (98.8%) ########################## YJL112W (2145bp = 715AA) has 16 hits (MDV1) Involved in mitochondrial division Spar (test2) orthologous hit at 89% f1627/1649 (98.7%) over 1651bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 79% f813/855 (95.1%) over 858bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1979/2120 (93.3%) over 2143bp for offset 0 <== THIS IS REAL YJL112W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL112W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1798 (0.4%). Conflicting: 9/1798 (0.5%). NoInfo: 5/1798 (0.3%). Certain keep: 1777/1798 (98.8%) ########################## YJL111W (1653bp = 551AA) has 35 hits (CCT7) Component of Chaperonin Containing T..unit seven (102) Spar (test2) orthologous hit at 92% f1653/1653 (100.0%) over 1653bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f858/858 (100.0%) over 858bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1653/1653 (100.0%) over 1653bp for offset 0 <== THIS IS REAL YJL111W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL111W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1799 (0.4%). Conflicting: 9/1799 (0.5%). NoInfo: 5/1799 (0.3%). Certain keep: 1778/1799 (98.8%) ########################## YJL110C (1656bp = 552AA) has 17 hits (GZF3) GATA zinc finger protein 3 homologou..d function (116) Spar (test2) orthologous hit at 85% f1642/1652 (99.4%) over 1656bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1613/1649 (97.8%) over 1656bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1520/1638 (92.8%) over 1656bp for offset 0 <== THIS IS REAL YJL110C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL110C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1800 (0.4%). Conflicting: 9/1800 (0.5%). NoInfo: 5/1800 (0.3%). Certain keep: 1779/1800 (98.8%) ########################## YJL109C (5310bp = 1770AA) has 21 hits (UTP10) Protein required for cell viability Spar (test2) orthologous hit at 90% f5302/5307 (99.9%) over 5309bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f5277/5304 (99.5%) over 5310bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f5297/5306 (99.8%) over 5308bp for offset 0 <== THIS IS REAL YJL109C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL109C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1801 (0.4%). Conflicting: 9/1801 (0.5%). NoInfo: 5/1801 (0.3%). Certain keep: 1780/1801 (98.8%) ########################## YJL108C (1152bp = 384AA) has 5 hits (PRM10) Flanking ORFs are: YJL110C and YJL108C. YJL108C skipped ########################## YJL106W (1938bp = 646AA) has 49 hits (IME2) Serine/Threonine protein kinase, pos..ed by IME1 (105) Spar (test2) orthologous hit at 90% f1935/1938 (99.8%) over 1938bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1932/1937 (99.7%) over 1938bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1923/1935 (99.4%) over 1937bp for offset 0 <== THIS IS REAL YJL106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1802 (0.4%). Conflicting: 9/1802 (0.5%). NoInfo: 5/1802 (0.3%). Certain keep: 1781/1802 (98.8%) ########################## YJL105W (1683bp = 561AA) has 35 hits (SET4) Spar (test2) orthologous hit at 89% f933/949 (98.3%) over 949bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 73% f868/995 (87.2%) over 1008bp for offset 0 Smik (test3) Longest island has f98 at 78% over 829bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f821/872 (94.2%) over 874bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|_____|____|____|_____|____|____|_____|____|____|_____|____|____|_____|____|____| 98f 78% 829bp Sm902full |===========================================>........> | YJL105W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL105W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1803 (0.4%). Conflicting: 9/1803 (0.5%). NoInfo: 5/1803 (0.3%). Certain keep: 1782/1803 (98.8%) ########################## YJL104W (450bp = 150AA) has 5 hits (MIA1) Hypothetical ORF Spar (test2) orthologous hit at 92% f450/450 (100.0%) over 450bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f449/449 (100.0%) over 449bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 85% f450/450 (100.0%) over 450bp for offset 0 <== THIS IS REAL YJL104W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL104W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1804 (0.4%). Conflicting: 9/1804 (0.5%). NoInfo: 5/1804 (0.3%). Certain keep: 1783/1804 (98.8%) ########################## YJL102W (2460bp = 820AA) has 14 hits (MEF2) mitochondrial elongation factor G-like protein Spar (test2) orthologous hit at 87% f2417/2460 (98.3%) over 2460bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2456/2459 (99.9%) over 2459bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2134/2186 (97.6%) over 2193bp for offset 0 <== THIS IS REAL YJL102W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL102W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1805 (0.4%). Conflicting: 9/1805 (0.5%). NoInfo: 5/1805 (0.3%). Certain keep: 1784/1805 (98.8%) ########################## YJL101C (2037bp = 679AA) has 8 hits (GSH1) gamma-glutamylcysteine synthetase Spar (test2) orthologous hit at 91% f2037/2037 (100.0%) over 2037bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2025/2035 (99.5%) over 2037bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2017/2034 (99.2%) over 2037bp for offset 0 <== THIS IS REAL YJL101C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL101C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1806 (0.4%). Conflicting: 9/1806 (0.5%). NoInfo: 5/1806 (0.3%). Certain keep: 1785/1806 (98.8%) ########################## YJL100W (1824bp = 608AA) has 5 hits (LSB6) Spar (test2) orthologous hit at 89% f1824/1824 (100.0%) over 1824bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1815/1823 (99.6%) over 1824bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1773/1815 (97.7%) over 1824bp for offset 0 <== THIS IS REAL YJL100W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL100W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1807 (0.4%). Conflicting: 9/1807 (0.5%). NoInfo: 5/1807 (0.3%). Certain keep: 1786/1807 (98.8%) ########################## YJL099W (2241bp = 747AA) has 12 hits (CHS6) involved in chitin biosynthesis Spar (test2) orthologous hit at 89% f2236/2240 (99.8%) over 2241bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2234/2240 (99.7%) over 2241bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2221/2236 (99.3%) over 2239bp for offset 2 <== THIS IS REAL YJL099W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL099W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1808 (0.4%). Conflicting: 9/1808 (0.5%). NoInfo: 5/1808 (0.3%). Certain keep: 1787/1808 (98.8%) ########################## YJL098W (3177bp = 1059AA) has 107 hits (SAP185) Sit4p-associated protein Spar (test2) orthologous hit at 88% f3121/3176 (98.3%) over 3177bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f3125/3166 (98.7%) over 3177bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f3037/3156 (96.2%) over 3177bp for offset 0 <== THIS IS REAL YJL098W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL098W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1809 (0.4%). Conflicting: 9/1809 (0.5%). NoInfo: 5/1809 (0.3%). Certain keep: 1788/1809 (98.8%) ########################## YJL096W (675bp = 225AA) has 5 hits (MRPL49) mitochondrial ribosomal protein of t..ge subunit (96) Spar (test2) orthologous hit at 86% f541/673 (80.4%) over 675bp for offset 0 Spar (test3) Longest island has f100 at 88% over 541bp <== THIS IS REAL Smik (test2) non-orthologous hit at 77% f547/670 (81.6%) over 674bp for offset 1 Smik (test3) Longest island has f99 at 82% over 534bp <== THIS IS REAL Sbay (test2) orthologous hit at 75% f618/637 (97.0%) over 639bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 675 |____________|____________|_____________|____________|____________|_____________|_________| 100f 88% 541bp Sp342full |.................|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| 99f 82% 534bp Sm904full |..................|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YJL096W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL096W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1810 (0.4%). Conflicting: 9/1810 (0.5%). NoInfo: 5/1810 (0.3%). Certain keep: 1789/1810 (98.8%) ########################## YJL095W (4437bp = 1479AA) has 56 hits (BCK1) MEKK serine/threonine kinase Spar (test2) orthologous hit at 89% f4420/4434 (99.7%) over 4437bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2031/2132 (95.3%) over 2135bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1960/2082 (94.1%) over 2099bp for offset 1 <== THIS IS REAL YJL095W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL095W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1811 (0.4%). Conflicting: 9/1811 (0.5%). NoInfo: 5/1811 (0.3%). Certain keep: 1790/1811 (98.8%) ########################## YJL094C (2622bp = 874AA) has 8 hits (KHA1) Spar (test2) orthologous hit at 90% f2612/2620 (99.7%) over 2622bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1129/1129 (100.0%) over 1129bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f1871/1923 (97.3%) over 1928bp for offset 2 <== THIS IS REAL YJL094C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL094C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1812 (0.4%). Conflicting: 9/1812 (0.5%). NoInfo: 5/1812 (0.3%). Certain keep: 1791/1812 (98.8%) ########################## YJL093C (2076bp = 692AA) has 10 hits (TOK1) outward-rectifier potassium channel Spar (test2) orthologous hit at 89% f1884/1900 (99.2%) over 1902bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f2028/2070 (98.0%) over 2076bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1973/1996 (98.8%) over 2003bp for offset 0 <== THIS IS REAL YJL093C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL093C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1813 (0.4%). Conflicting: 9/1813 (0.5%). NoInfo: 5/1813 (0.3%). Certain keep: 1792/1813 (98.8%) ########################## YJL092W (3525bp = 1175AA) has 31 hits (HPR5) DNA helicase Spar (test2) orthologous hit at 88% f3509/3523 (99.6%) over 3525bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2478/3510 (70.6%) over 3525bp for offset 1 Smik (test3) Longest island has f98 at 81% over 2535bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f3062/3269 (93.7%) over 3293bp for offset 2 <== THIS IS REAL 0 100203004050060700809001k 1k1k 1k1k 1k1k 1k1k 1k 2k2k 2k2k 2k2k 2k2k 2k 2k3k 3k3k 3k3k 33k |_|__|_|__|_|__|_|__|_|__|__|_|__|_|__|_|__|_|__|__|_|__|_|__|_|__|_|__|__|_|__|_|__|_|__|| 100f 87% 1002bp 98f 81% 2535bp Sm906full |========================|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YJL092W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL092W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1814 (0.4%). Conflicting: 9/1814 (0.5%). NoInfo: 5/1814 (0.3%). Certain keep: 1793/1814 (98.8%) ########################## YJL090C (2295bp = 765AA) has 23 hits (DPB11) DNA polymerase II complex Spar (test2) orthologous hit at 87% f2288/2291 (99.9%) over 2295bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1117/1127 (99.1%) over 1133bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1472/1489 (98.9%) over 1497bp for offset 0 <== THIS IS REAL YJL090C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL090C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1815 (0.4%). Conflicting: 9/1815 (0.5%). NoInfo: 5/1815 (0.3%). Certain keep: 1794/1815 (98.8%) ########################## YJL089W (2490bp = 830AA) has 88 hits (SIP4) shows homology to DNA binding domain..nscription (171) Spar (test2) orthologous hit at 88% f2479/2486 (99.7%) over 2489bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2434/2477 (98.3%) over 2490bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1688/1880 (89.8%) over 1901bp for offset 0 Sbay (test3) Longest island has f98 at 76% over 1641bp <== THIS IS REAL 0 100 200300 400 500600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k |__|___|__|___|___|__|___|__|___|___|__|___|__|___|___|__|___|___|__|___|__|___|___|__|___| 98f 76% 1641bp Sb722full |==========================================================>........> | YJL089W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL089W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1816 (0.4%). Conflicting: 9/1816 (0.5%). NoInfo: 5/1816 (0.3%). Certain keep: 1795/1816 (98.8%) ########################## YJL088W (1017bp = 339AA) has 11 hits (ARG3) Ornithine carbamoyltransferase Spar (test2) orthologous hit at 90% f1017/1017 (100.0%) over 1017bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1012/1016 (99.6%) over 1017bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f999/1012 (98.7%) over 1017bp for offset 0 <== THIS IS REAL YJL088W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL088W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1817 (0.4%). Conflicting: 9/1817 (0.5%). NoInfo: 5/1817 (0.3%). Certain keep: 1796/1817 (98.8%) ########################## YJL087C (2484bp = 828AA) has 19 hits (TRL1) tRNA ligase Flanking ORFs are: YJL089W and YJL087C. YJL087C skipped ########################## YJL085W (1872bp = 624AA) has 14 hits (EXO70) 70 kD component of the Exocyst comp..exocytosis (108) Flanking ORFs are: YJL089W and YJL087C. YJL085W skipped ########################## YJL082W (2196bp = 732AA) has 16 hits (IML2) Similar to Ykr018p Spar (test2) orthologous hit at 90% f2195/2195 (100.0%) over 2195bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2196/2196 (100.0%) over 2196bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f2179/2191 (99.5%) over 2196bp for offset 0 <== THIS IS REAL YJL082W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL082W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1818 (0.4%). Conflicting: 9/1818 (0.5%). NoInfo: 5/1818 (0.3%). Certain keep: 1797/1818 (98.8%) ########################## YJL081C (1470bp = 490AA) has 12 hits (ARP4) 54.8 kDa actin-related protein Spar (test2) orthologous hit at 91% f1469/1469 (100.0%) over 1469bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1462/1468 (99.6%) over 1469bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1453/1468 (99.0%) over 1470bp for offset 0 <== THIS IS REAL YJL081C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL081C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1819 (0.4%). Conflicting: 9/1819 (0.5%). NoInfo: 5/1819 (0.3%). Certain keep: 1798/1819 (98.8%) ########################## YJL080C (3669bp = 1223AA) has 15 hits (SCP160) May be required during cell divis..ansmission (201) Spar (test2) orthologous hit at 92% f3665/3666 (100.0%) over 3669bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3050/3052 (99.9%) over 3056bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1252/1269 (98.7%) over 1276bp for offset 0 <== THIS IS REAL YJL080C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL080C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1820 (0.4%). Conflicting: 9/1820 (0.5%). NoInfo: 5/1820 (0.3%). Certain keep: 1799/1820 (98.8%) ########################## YJL079C (900bp = 300AA) has 27 hits (PRY1) Similar to plant PR-1 class of pathog..d proteins (99) Spar (test2) orthologous hit at 85% f552/565 (97.7%) over 569bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 71% f478/588 (81.3%) over 602bp for offset 0 Smik (test3) Longest island has f98 at 82% over 412bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f308/563 (54.7%) over 566bp for offset 2 Sbay (test3) Longest island has f100 at 82% over 308bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 |_________|_________|_________|_________|_________|_________|_________|_________|_________| 98f 82% 412bp Sm908brk |...................|oooooooooooooooooooooooooooooooooooooooo> | 97f 76% 213bp 100f 82% 308bp Sb718brk |....|oooooooooooooooooooo|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YJL079C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL079C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1821 (0.4%). Conflicting: 9/1821 (0.5%). NoInfo: 5/1821 (0.3%). Certain keep: 1800/1821 (98.8%) ########################## YJL078C (2646bp = 882AA) has 93 hits (PRY3) Similar to plant PR-1 class of patho..d proteins (100) Spar (test2) orthologous hit at 64% f392/454 (86.3%) over 462bp for offset 0 Spar (test3) Longest island has f91 at 66% over 409bp <== THIS IS REAL Smik (test2) non-orthologous hit at 54% f853/1385 (61.6%) over 1463bp for offset 1 Smik (test3) Longest island has f72 at 57% over 115bp Smik (test2) non-orthologous hit at 53% f826/1278 (64.6%) over 1351bp for offset 2 Smik (test3) Longest island has f76 at 54% over 138bp Smik (test2) non-orthologous hit at 69% f835/1010 (82.7%) over 1034bp for offset 0 Smik (test3) Longest island has f99 at 83% over 554bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 53% f993/1544 (64.3%) over 1634bp for offset 0 Sbay (test3) Longest island has f83 at 56% over 259bp Sbay (test2) non-orthologous hit at 54% f479/677 (70.8%) over 712bp for offset 0 Sbay (test3) Longest island has f87 at 58% over 212bp Sbay (test2) non-orthologous hit at 63% f448/534 (83.9%) over 544bp for offset 2 Sbay (test3) Longest island has f93 at 67% over 418bp <== THIS IS REAL 0 100200 300400 500600700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k2k |__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|_| 91f 66% 409bp 79f 48% 33bp Sp341brk |=============|o> | 71f 5572f 57% 178f 55% 89bp 84f 78f 55% 10100f 60% 52bp Sm943brk ||x>...|xxx>....|xx>................|xxx|xxx>.....|x> | 75f 590f 92f77f 5690f 52% 176f 54%66f 56% 77bp Sm943brk |..|==>.|==>|=>|=>...|===>....|====>.|==>.....> | 99f 83% 554bp 77f 57% 248bp Sm346brk |=================>........|========> | 83f 56% 259bp 92f 77f 60% 78bp Sb749full |......|xxxxxxxx>...............|xx>|xx>...............> | 87f 58% 212bp Sb53full |.......|======>........> | 93f 67% 418bp Sb294brk |xxxxxxxxxxxxx>...> | YJL078C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL078C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1822 (0.4%). Conflicting: 9/1822 (0.5%). NoInfo: 5/1822 (0.3%). Certain keep: 1801/1822 (98.8%) ########################## YJL077C (396bp = 132AA) has 12 hits (ICS3) Increased Copper Sensitivity Spar (test2) orthologous hit at 86% f184/393 (46.8%) over 396bp for offset 2 Spar (test3) Longest island has f100 at 89% over 167bp Smik (test2) orthologous hit at 73% f197/382 (51.6%) over 391bp for offset 2 Smik (test3) Longest island has f100 at 75% over 163bp Sbay (test2) orthologous hit at 62% f75/155 (48.4%) over 163bp for offset 0 Sbay (test3) Longest island has f79 at 72% over 47bp 0 100 200 300 396 |_____________________|______________________|______________________|_____________________| 100f 85% 116bp 100f 77% 100f 95% 57bp100f 89% 167bp Sp338full |=========================>|oooo>...|============|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>..| 81f 70% 37bp 100f 70% 33bp 100f 81% 75bp 100f 75% 163bp Sm346full |=======>........|ooooooo>......|oooooooooooooooo|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>..| 100f100f 68% 31bp79f 72% 47b100f 47% 38bp Sb908full |===|oooooo>.....|ooooooooo>|=======>> | YJL077C: kill: - keep: YJL077C - Not enough info. Kill () and Keep () Current total: Certain kills: 7/1823 (0.4%). Conflicting: 9/1823 (0.5%). NoInfo: 6/1823 (0.3%). Certain keep: 1801/1823 (98.8%) ########################## YJL076W (3570bp = 1190AA) has 27 hits (NET1) nucleolar protein involved in exit ..om mitosis (92) Flanking ORFs are: YJL078C and YJL076W. YJL076W skipped ########################## YJL074C (3693bp = 1231AA) has 89 hits (SMC3) SMC chromosomal ATPase family member Spar (test2) non-orthologous hit at 90% f3690/3692 (99.9%) over 3693bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2228/2265 (98.4%) over 2272bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3656/3686 (99.2%) over 3693bp for offset 0 <== THIS IS REAL YJL074C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL074C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1824 (0.4%). Conflicting: 9/1824 (0.5%). NoInfo: 6/1824 (0.3%). Certain keep: 1802/1824 (98.8%) ########################## YJL073W (1938bp = 646AA) has 241 hits (JEM1) ER chaperone Spar (test2) orthologous hit at 87% f868/913 (95.1%) over 916bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1623/1799 (90.2%) over 1815bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1607/1756 (91.5%) over 1766bp for offset 0 <== THIS IS REAL YJL073W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL073W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1825 (0.4%). Conflicting: 9/1825 (0.5%). NoInfo: 6/1825 (0.3%). Certain keep: 1803/1825 (98.8%) ########################## YJL071W (1725bp = 575AA) has 8 hits (ARG2) Acetylglutamate Synthase Spar (test2) orthologous hit at 87% f1715/1723 (99.5%) over 1725bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f1695/1716 (98.8%) over 1717bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1680/1713 (98.1%) over 1717bp for offset 0 <== THIS IS REAL YJL071W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL071W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1826 (0.4%). Conflicting: 9/1826 (0.5%). NoInfo: 6/1826 (0.3%). Certain keep: 1804/1826 (98.8%) ########################## YJL069C (1785bp = 595AA) has 55 hits (UTP18) Protein required for cell viability Spar (test2) orthologous hit at 89% f1782/1782 (100.0%) over 1782bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1264/1781 (71.0%) over 1784bp for offset 0 Smik (test3) Longest island has f100 at 86% over 1264bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1739/1771 (98.2%) over 1782bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____| 99f 84% 520bp 100f 86% 1264bp Sm343full |=========================|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YJL069C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL069C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1827 (0.4%). Conflicting: 9/1827 (0.5%). NoInfo: 6/1827 (0.3%). Certain keep: 1805/1827 (98.8%) ########################## YJL066C (759bp = 253AA) has 4 hits (MPM1) Flanking ORFs are: YJL070C and YJL068C. YJL066C skipped ########################## YJL063C (717bp = 239AA) has 3 hits (MRPL8) Mitochondrial ribosomal protein MRPL8.. coli L17) (101) Spar (test2) orthologous hit at 89% f717/717 (100.0%) over 717bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f717/717 (100.0%) over 717bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f709/715 (99.2%) over 716bp for offset 0 <== THIS IS REAL YJL063C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL063C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1828 (0.4%). Conflicting: 9/1828 (0.5%). NoInfo: 6/1828 (0.3%). Certain keep: 1806/1828 (98.8%) ########################## YJL062W (2493bp = 831AA) has 8 hits (LAS21) putative membrane protein, a member ..per family (117) Spar (test2) orthologous hit at 88% f2492/2492 (100.0%) over 2492bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2480/2491 (99.6%) over 2492bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2324/2343 (99.2%) over 2350bp for offset 0 <== THIS IS REAL YJL062W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL062W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1829 (0.4%). Conflicting: 9/1829 (0.5%). NoInfo: 6/1829 (0.3%). Certain keep: 1807/1829 (98.8%) ########################## YJL061W (2142bp = 714AA) has 23 hits (NUP82) 82-kDa protein, with putative coile..ucleoporin (180) Spar (test2) orthologous hit at 86% f2130/2140 (99.5%) over 2142bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2139/2141 (99.9%) over 2142bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1341/1368 (98.0%) over 1373bp for offset 0 <== THIS IS REAL YJL061W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL061W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1830 (0.4%). Conflicting: 9/1830 (0.5%). NoInfo: 6/1830 (0.3%). Certain keep: 1808/1830 (98.8%) ########################## YJL060W (1335bp = 445AA) has 5 hits (BNA3) YJL060W Spar (test2) orthologous hit at 90% f1335/1335 (100.0%) over 1335bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1335/1335 (100.0%) over 1335bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1330/1334 (99.7%) over 1335bp for offset 0 <== THIS IS REAL YJL060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1831 (0.4%). Conflicting: 9/1831 (0.5%). NoInfo: 6/1831 (0.3%). Certain keep: 1809/1831 (98.8%) ########################## YJL059W (1227bp = 409AA) has 8 hits (YHC3) Homolog of human CLN3 Spar (test2) orthologous hit at 89% f1224/1224 (100.0%) over 1227bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1215/1225 (99.2%) over 1227bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1211/1223 (99.0%) over 1227bp for offset 0 <== THIS IS REAL YJL059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1832 (0.4%). Conflicting: 9/1832 (0.5%). NoInfo: 6/1832 (0.3%). Certain keep: 1810/1832 (98.8%) ########################## YJL057C (2004bp = 668AA) has 8 hits (IKS1) probable serine/threonine kinase Spar (test2) orthologous hit at 90% f2004/2004 (100.0%) over 2004bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f730/742 (98.4%) over 744bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f968/1885 (51.4%) over 1896bp for offset 1 Sbay (test3) Longest island has f99 at 81% over 966bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 22k |___|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|____|___|| 99f 81% 966bp 97f 77% 881bp Sb909brk |.|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>|=======================================| YJL057C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL057C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1833 (0.4%). Conflicting: 9/1833 (0.5%). NoInfo: 6/1833 (0.3%). Certain keep: 1811/1833 (98.8%) ########################## YJL056C (2643bp = 881AA) has 26 hits (ZAP1) Metalloregulatory protein involved i..regulation (124) Spar (test2) orthologous hit at 79% f1590/1853 (85.8%) over 1875bp for offset 0 Spar (test3) Longest island has f99 at 89% over 1445bp <== THIS IS REAL Smik (test2) orthologous hit at 77% f882/906 (97.4%) over 911bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f162/287 (56.4%) over 288bp for offset 1 Sbay (test3) Longest island has f100 at 84% over 162bp Sbay (test2) non-orthologous hit at 61% f147/213 (69.0%) over 225bp for offset 2 Sbay (test3) Longest island has f86 at 64% over 141bp 0 100200 300400 500600700 800900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k2k |__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|_| 99f 89% 1445bp Sp337full |..............|================================================| 1010100f 84% 162bpSb98full |=|x|ooooo> | 18186f 64% 14Sb98full ||||xxxx> | YJL056C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YJL056C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 7/1834 (0.4%). Conflicting: 9/1834 (0.5%). NoInfo: 6/1834 (0.3%). Certain keep: 1812/1834 (98.8%) ########################## YJL054W (1437bp = 479AA) has 5 hits (TIM54) Translocase for the insertion of pro.. membrane. (124) Spar (test2) orthologous hit at 87% f1436/1437 (99.9%) over 1437bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1399/1431 (97.8%) over 1436bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f903/939 (96.2%) over 953bp for offset 2 <== THIS IS REAL YJL054W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL054W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1835 (0.4%). Conflicting: 9/1835 (0.5%). NoInfo: 6/1835 (0.3%). Certain keep: 1813/1835 (98.8%) ########################## YJL053W (1140bp = 380AA) has 7 hits (PEP8) Vacuolar protein similar to mouse gen.. H58 (91) Spar (test2) orthologous hit at 90% f1140/1140 (100.0%) over 1140bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1133/1138 (99.6%) over 1139bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1107/1135 (97.5%) over 1138bp for offset 0 <== THIS IS REAL YJL053W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL053W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1836 (0.4%). Conflicting: 9/1836 (0.5%). NoInfo: 6/1836 (0.3%). Certain keep: 1814/1836 (98.8%) ########################## YJL052W (999bp = 333AA) has 15 hits (TDH1) Glyceraldehyde-3-phosphate dehydrogenase 1 Spar (test2) orthologous hit at 95% f995/999 (99.6%) over 999bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f999/999 (100.0%) over 999bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 92% f995/998 (99.7%) over 999bp for offset 0 <== THIS IS REAL YJL052W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL052W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1837 (0.4%). Conflicting: 9/1837 (0.5%). NoInfo: 6/1837 (0.3%). Certain keep: 1815/1837 (98.8%) ########################## YJL050W (3222bp = 1074AA) has 45 hits (MTR4) RNA helicase Spar (test2) orthologous hit at 91% f3219/3222 (99.9%) over 3222bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3115/3142 (99.1%) over 3145bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2294/2393 (95.9%) over 2409bp for offset 2 <== THIS IS REAL YJL050W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL050W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1838 (0.4%). Conflicting: 9/1838 (0.5%). NoInfo: 6/1838 (0.3%). Certain keep: 1816/1838 (98.8%) ########################## YJL047C (2529bp = 843AA) has 11 hits (RTT101) Regulator of Ty1 Transposition Spar (test2) orthologous hit at 87% f2521/2527 (99.8%) over 2529bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2498/2520 (99.1%) over 2529bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2500/2523 (99.1%) over 2529bp for offset 0 <== THIS IS REAL YJL047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1839 (0.4%). Conflicting: 9/1839 (0.5%). NoInfo: 6/1839 (0.3%). Certain keep: 1817/1839 (98.8%) ########################## YJL044C (1377bp = 459AA) has 11 hits (GYP6) GTPase-activating protein for Ypt6 Spar (test2) orthologous hit at 90% f1365/1376 (99.2%) over 1377bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1365/1376 (99.2%) over 1377bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f962/983 (97.9%) over 986bp for offset 0 <== THIS IS REAL YJL044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1840 (0.4%). Conflicting: 9/1840 (0.5%). NoInfo: 6/1840 (0.3%). Certain keep: 1818/1840 (98.8%) ########################## YJL042W (4197bp = 1399AA) has 21 hits (MHP1) Putative microtubule-associated protein (MAP) Spar (test2) orthologous hit at 90% f3003/3015 (99.6%) over 3017bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f4072/4184 (97.3%) over 4197bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2265/2277 (99.5%) over 2280bp for offset 0 <== THIS IS REAL YJL042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1841 (0.4%). Conflicting: 9/1841 (0.5%). NoInfo: 6/1841 (0.3%). Certain keep: 1819/1841 (98.8%) ########################## YJL039C (5052bp = 1684AA) has 21 hits (NUP192) large yeast nucleoporin Spar (test2) non-orthologous hit at 90% f4986/5050 (98.7%) over 5052bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f5021/5046 (99.5%) over 5052bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f4973/5038 (98.7%) over 5052bp for offset 0 <== THIS IS REAL YJL039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1842 (0.4%). Conflicting: 9/1842 (0.5%). NoInfo: 6/1842 (0.3%). Certain keep: 1820/1842 (98.8%) ########################## YJL036W (1272bp = 424AA) has 18 hits (SNX4) Sorting NeXin Spar (test2) orthologous hit at 90% f1271/1271 (100.0%) over 1271bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1271/1271 (100.0%) over 1271bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 85% f1172/1172 (100.0%) over 1172bp for offset 0 <== THIS IS REAL YJL036W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL036W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1843 (0.4%). Conflicting: 9/1843 (0.5%). NoInfo: 6/1843 (0.3%). Certain keep: 1821/1843 (98.8%) ########################## YJL035C (753bp = 251AA) has 5 hits (TAD2) tRNA-specific adenosine-34 deaminase s..unit Tad2p (92) Spar (test2) orthologous hit at 90% f752/752 (100.0%) over 752bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f743/751 (98.9%) over 753bp for offset 0 <== THIS IS REAL YJL035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1844 (0.4%). Conflicting: 9/1844 (0.5%). NoInfo: 6/1844 (0.3%). Certain keep: 1822/1844 (98.8%) ########################## YJL034W (2049bp = 683AA) has 79 hits (KAR2) Homologue of mammalian BiP (GPR78) p..ene family (119) Spar (test2) orthologous hit at 93% f1979/1979 (100.0%) over 1979bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f422/422 (100.0%) over 422bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1468/1468 (100.0%) over 1468bp for offset 0 <== THIS IS REAL YJL034W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL034W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1845 (0.4%). Conflicting: 9/1845 (0.5%). NoInfo: 6/1845 (0.3%). Certain keep: 1823/1845 (98.8%) ########################## YJL033W (2313bp = 771AA) has 133 hits (HCA4) putative RNA helicase Spar (test2) orthologous hit at 92% f2313/2313 (100.0%) over 2313bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1996/2311 (86.4%) over 2313bp for offset 0 Smik (test3) Longest island has f99 at 88% over 2007bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f2309/2312 (99.9%) over 2313bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 22k |__|___|___|___|___|___|___|___|___|__|___|___|___|___|___|___|___|___|__|___|___|___|___|| 99f 88% 2007bp 100f 87% 306Sm335full |=============================================================================|xxxxxxxxxxx| YJL033W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL033W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1846 (0.4%). Conflicting: 9/1846 (0.5%). NoInfo: 6/1846 (0.3%). Certain keep: 1824/1846 (98.8%) ########################## YJL031C (873bp = 291AA) has 11 hits (BET4) Geranylgeranyltransferase Type II alp..a subunit) (118) Flanking ORFs are: YJL034W and YJL032W. YJL031C skipped ########################## YJL030W (591bp = 197AA) has 5 hits (MAD2) spindle checkpoint complex subunit Spar (test2) orthologous hit at 91% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f580/590 (98.3%) over 591bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f580/588 (98.6%) over 590bp for offset 0 <== THIS IS REAL YJL030W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL030W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1847 (0.4%). Conflicting: 9/1847 (0.5%). NoInfo: 6/1847 (0.3%). Certain keep: 1825/1847 (98.8%) ########################## YJL029C (2469bp = 823AA) has 6 hits (VPS53) Vps53p is a hydrophilic protein that..nd Vps54p. (178) Spar (test2) orthologous hit at 89% f2469/2469 (100.0%) over 2469bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2451/2465 (99.4%) over 2469bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1634/1680 (97.3%) over 1694bp for offset 0 <== THIS IS REAL YJL029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1848 (0.4%). Conflicting: 9/1848 (0.5%). NoInfo: 6/1848 (0.3%). Certain keep: 1826/1848 (98.8%) ########################## YJL026W (1200bp = 400AA) has 9 hits (RNR2) small subunit of ribonucleotide reductase Spar (test2) orthologous hit at 95% f752/1200 (62.7%) over 1200bp for offset 0 Spar (test3) Longest island has f100 at 96% over 752bp <== THIS IS REAL Smik (test2) orthologous hit at 92% f1200/1200 (100.0%) over 1200bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1183/1198 (98.7%) over 1200bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|______|_______|______|_______|______|_______|______|_______|______|_______| 100f 96% 752bp 100f 95% 448bp Sp299full |=======================================================|ooooooooooooooooooooooooooooooooo| YJL026W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL026W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1849 (0.4%). Conflicting: 9/1849 (0.5%). NoInfo: 6/1849 (0.3%). Certain keep: 1827/1849 (98.8%) ########################## YJL025W (1545bp = 515AA) has 6 hits (RRN7) member of yeast Pol I core factor (CF..ng protein (137) Spar (test2) orthologous hit at 88% f1527/1544 (98.9%) over 1545bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1432/1487 (96.3%) over 1499bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1369/1411 (97.0%) over 1413bp for offset 2 <== THIS IS REAL YJL025W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL025W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1850 (0.4%). Conflicting: 9/1850 (0.5%). NoInfo: 6/1850 (0.3%). Certain keep: 1828/1850 (98.8%) ########################## YJL023C (1044bp = 348AA) has 7 hits (PET130) Nuclear gene encoding mitochondrial protein Flanking ORFs are: YJL026W and YJL024C. YJL023C skipped ########################## YJL020C (3474bp = 1158AA) has 123 hits (BBC1) shows synthetic fitness Protein as..5p complex (125) Spar (test2) orthologous hit at 82% f1368/1399 (97.8%) over 1407bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f1368/1523 (89.8%) over 1546bp for offset 0 Smik (test3) Longest island has f99 at 80% over 1012bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 67% f2243/2698 (83.1%) over 2768bp for offset 1 Sbay (test3) Longest island has f99 at 78% over 923bp <== THIS IS REAL 0 100203004050060070800901k 1k 1k1k 1k1k 1k 1k1k 1k2k 2k2k 2k 2k2k 2k2k 2k 2k3k 3k3k 3k 3k3k |_|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__|__|_| 92f 78% 28599f 80% 1012bp Sm334full |...|xxxxxx>...|xxxxxxxxxxxxxxxxxxxxxxxxx| 94f 74% 20386f 65% 734bp 99f 78% 923bp Sb342full |............|oooo>.....|oooooooooooooooooo>......|ooooooooooooooooooooo|o> YJL020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1851 (0.4%). Conflicting: 9/1851 (0.5%). NoInfo: 6/1851 (0.3%). Certain keep: 1829/1851 (98.8%) ########################## YJL014W (1605bp = 535AA) has 25 hits (CCT3) Cytoplasmic chaperonin subunit gamma Spar (test2) orthologous hit at 93% f1604/1604 (100.0%) over 1604bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1605/1605 (100.0%) over 1605bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1604/1604 (100.0%) over 1604bp for offset 0 <== THIS IS REAL YJL014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1852 (0.4%). Conflicting: 9/1852 (0.5%). NoInfo: 6/1852 (0.3%). Certain keep: 1830/1852 (98.8%) ########################## YJL013C (1548bp = 516AA) has 18 hits (MAD3) spindle checkpoint complex subunit Spar (test2) orthologous hit at 85% f1530/1545 (99.0%) over 1548bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1465/1530 (95.8%) over 1538bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1442/1532 (94.1%) over 1548bp for offset 2 <== THIS IS REAL YJL013C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL013C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1853 (0.4%). Conflicting: 9/1853 (0.5%). NoInfo: 6/1853 (0.3%). Certain keep: 1831/1853 (98.8%) ########################## YJL012C (1947bp = 649AA) has 21 hits (VTC4) polyphosphate synthetase (putative) Spar (test2) orthologous hit at 92% f1826/1947 (93.8%) over 1947bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1826/1947 (93.8%) over 1947bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1826/1947 (93.8%) over 1947bp for offset 0 <== THIS IS REAL YJL012C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL012C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1854 (0.4%). Conflicting: 9/1854 (0.5%). NoInfo: 6/1854 (0.3%). Certain keep: 1832/1854 (98.8%) ########################## YJL008C (1707bp = 569AA) has 12 hits (CCT8) Component of Chaperonin Containing T..unit eight (102) Flanking ORFs are: YJL012C-A and YJL011C. YJL008C skipped ########################## YJL006C (972bp = 324AA) has 18 hits (CTK2) cyclin-like protein Spar (test2) orthologous hit at 90% f972/972 (100.0%) over 972bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f972/972 (100.0%) over 972bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f952/967 (98.4%) over 972bp for offset 0 <== THIS IS REAL YJL006C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL006C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1855 (0.4%). Conflicting: 9/1855 (0.5%). NoInfo: 6/1855 (0.3%). Certain keep: 1833/1855 (98.8%) ########################## YJL005W (6081bp = 2027AA) has 24 hits (CYR1) adenylate cyclase Spar (test2) orthologous hit at 91% f4563/4563 (100.0%) over 4563bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f4561/4584 (99.5%) over 4585bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f4549/4574 (99.5%) over 4577bp for offset 0 <== THIS IS REAL YJL005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1856 (0.4%). Conflicting: 9/1856 (0.5%). NoInfo: 6/1856 (0.3%). Certain keep: 1834/1856 (98.8%) ########################## YJL004C (612bp = 204AA) has 15 hits (SYS1) Multicopy suppressor of ypt6 null mutation Spar (test2) orthologous hit at 87% f612/612 (100.0%) over 612bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f606/611 (99.2%) over 612bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f603/610 (98.9%) over 612bp for offset 0 <== THIS IS REAL YJL004C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL004C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1857 (0.4%). Conflicting: 9/1857 (0.5%). NoInfo: 6/1857 (0.3%). Certain keep: 1835/1857 (98.8%) ########################## YJL002C (1431bp = 477AA) has 7 hits (OST1) 64-kDa, alpha subunit of oligosacchar..bophorin I (139) Spar (test2) orthologous hit at 87% f1431/1431 (100.0%) over 1431bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1400/1416 (98.9%) over 1418bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1401/1414 (99.1%) over 1420bp for offset 0 <== THIS IS REAL YJL002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJL002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1858 (0.4%). Conflicting: 9/1858 (0.5%). NoInfo: 6/1858 (0.3%). Certain keep: 1836/1858 (98.8%) ########################## YJR002W (1782bp = 594AA) has 51 hits (MPP10) U3 snoRNP protein Spar (test2) orthologous hit at 91% f616/702 (87.7%) over 703bp for offset 1 Spar (test3) Longest island has f99 at 91% over 621bp <== THIS IS REAL Smik (test2) orthologous hit at 80% f1649/1767 (93.3%) over 1782bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1416/1446 (97.9%) over 1452bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____| 99f 91% 621bp Sp301brk |...|ooooooooooooooooooooooooooooooo| YJR002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1859 (0.4%). Conflicting: 9/1859 (0.5%). NoInfo: 6/1859 (0.3%). Certain keep: 1837/1859 (98.8%) ########################## YJR004C (1953bp = 651AA) has 6 hits (SAG1) alpha-agglutinin Spar (test2) orthologous hit at 83% f1935/1945 (99.5%) over 1953bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 72% f1809/1932 (93.6%) over 1952bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f1645/1923 (85.5%) over 1952bp for offset 0 Sbay (test3) Longest island has f99 at 76% over 1330bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|____|___|____|___|____|____|___|____|___|____|____|___|____|___|____|__| 99f 76% 1330bp Sb342full |============================================================>...........................>| YJR004C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR004C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1860 (0.4%). Conflicting: 9/1860 (0.5%). NoInfo: 6/1860 (0.3%). Certain keep: 1838/1860 (98.8%) ########################## YJR005W (2103bp = 701AA) has 12 hits (APL1) beta-adaptin, large subunit of the c..in complex (114) Spar (test2) orthologous hit at 90% f2103/2103 (100.0%) over 2103bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f507/512 (99.0%) over 513bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2094/2101 (99.7%) over 2103bp for offset 0 <== THIS IS REAL YJR005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1861 (0.4%). Conflicting: 9/1861 (0.5%). NoInfo: 6/1861 (0.3%). Certain keep: 1839/1861 (98.8%) ########################## YJR006W (1464bp = 488AA) has 7 hits (HYS2) DNA polymerase delta 55 KD subunit Spar (test2) orthologous hit at 88% f1435/1461 (98.2%) over 1464bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1456/1463 (99.5%) over 1464bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1450/1462 (99.2%) over 1464bp for offset 0 <== THIS IS REAL YJR006W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR006W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1862 (0.4%). Conflicting: 9/1862 (0.5%). NoInfo: 6/1862 (0.3%). Certain keep: 1840/1862 (98.8%) ########################## YJR007W (915bp = 305AA) has 10 hits (SUI2) Translation initiation factor eIF-2 a..ha subunit (92) Spar (test2) orthologous hit at 94% f915/915 (100.0%) over 915bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f887/887 (100.0%) over 887bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f915/915 (100.0%) over 915bp for offset 0 <== THIS IS REAL YJR007W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR007W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1863 (0.4%). Conflicting: 9/1863 (0.5%). NoInfo: 6/1863 (0.3%). Certain keep: 1841/1863 (98.8%) ########################## YJR009C (999bp = 333AA) has 17 hits (TDH2) glyceraldehyde 3-phosphate dehydrogenase Spar (test2) orthologous hit at 97% f999/999 (100.0%) over 999bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 98% f999/999 (100.0%) over 999bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 96% f632/632 (100.0%) over 632bp for offset 0 <== THIS IS REAL YJR009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1864 (0.4%). Conflicting: 9/1864 (0.5%). NoInfo: 6/1864 (0.3%). Certain keep: 1842/1864 (98.8%) ########################## YJR010W (1536bp = 512AA) has 5 hits (MET3) ATP sulfurylase Spar (test2) orthologous hit at 92% f1536/1536 (100.0%) over 1536bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1536/1536 (100.0%) over 1536bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1536/1536 (100.0%) over 1536bp for offset 0 <== THIS IS REAL YJR010W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR010W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1865 (0.4%). Conflicting: 9/1865 (0.5%). NoInfo: 6/1865 (0.3%). Certain keep: 1843/1865 (98.8%) ########################## YJR010C-A (285bp = 95AA) has 10 hits (SPC1) signal peptidase subunit Spar (test2) orthologous hit at 92% f284/284 (100.0%) over 284bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f284/284 (100.0%) over 284bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f284/284 (100.0%) over 284bp for offset 0 <== THIS IS REAL YJR010C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR010C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1866 (0.4%). Conflicting: 9/1866 (0.5%). NoInfo: 6/1866 (0.3%). Certain keep: 1844/1866 (98.8%) ########################## YJR016C (1758bp = 586AA) has 4 hits (ILV3) dihydroxyacid dehydratase Spar (test2) orthologous hit at 93% f1758/1758 (100.0%) over 1758bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1758/1758 (100.0%) over 1758bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1749/1757 (99.5%) over 1758bp for offset 0 <== THIS IS REAL YJR016C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR016C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1867 (0.4%). Conflicting: 9/1867 (0.5%). NoInfo: 6/1867 (0.3%). Certain keep: 1845/1867 (98.8%) ########################## YJR017C (573bp = 191AA) has 5 hits (ESS1) Peptidyl-prolyl cis/trans isomerase (PPIase) Flanking ORFs are: YJR015W and YJR017C. YJR017C skipped ########################## YJR019C (1050bp = 350AA) has 3 hits (TES1) peroxisomal acyl-CoA thioesterase Flanking ORFs are: YJR015W and YJR017C. YJR019C skipped ########################## YJR022W (387bp = 129AA) has 4 hits (LSM8) Sm-like protein Flanking ORFs are: YJR015W and YJR017C. YJR022W skipped ########################## YJR025C (534bp = 178AA) has 4 hits (BNA1) 3-hydroxyanthranilic acid dioxygenase Spar (test2) orthologous hit at 92% f534/534 (100.0%) over 534bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f534/534 (100.0%) over 534bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f534/534 (100.0%) over 534bp for offset 0 <== THIS IS REAL YJR025C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR025C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1868 (0.4%). Conflicting: 9/1868 (0.5%). NoInfo: 6/1868 (0.3%). Certain keep: 1846/1868 (98.8%) ########################## YJR031C (4227bp = 1409AA) has 35 hits (GEA1) GDP/GTP exchange factor Spar (test2) orthologous hit at 87% f4224/4226 (100.0%) over 4227bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f3153/4217 (74.8%) over 4227bp for offset 1 Smik (test3) Longest island has f99 at 80% over 2330bp <== THIS IS REAL Sbay (test2) orthologous hit at 76% f3245/3326 (97.6%) over 3346bp for offset 0 <== THIS IS REAL 0 10203040506070080901k1k1k1k1k1k 1k1k1k1k2k2k2k2k 2k2k2k2k2k2k3k 3k3k3k3k3k3k3k3k 3k4k4k44k |_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|__|_|_|_|_|_|_|__|_|_|_|_|_|_|_|__|_|_|_|| 98f 82% 861bp 99f 80% 2330bp 99f 79% 1008bp Sm330full |=================>|================================================|ooooooooooooooooooooo| YJR031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1869 (0.4%). Conflicting: 9/1869 (0.5%). NoInfo: 6/1869 (0.3%). Certain keep: 1847/1869 (98.8%) ########################## YJR032W (1182bp = 394AA) has 17 hits (CPR7) peptidyl-prolyl cis/trans isomerase Spar (test2) orthologous hit at 88% f1179/1181 (99.8%) over 1182bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1166/1172 (99.5%) over 1173bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1156/1162 (99.5%) over 1164bp for offset 0 <== THIS IS REAL YJR032W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR032W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1870 (0.4%). Conflicting: 9/1870 (0.5%). NoInfo: 6/1870 (0.3%). Certain keep: 1848/1870 (98.8%) ########################## YJR033C (4074bp = 1358AA) has 13 hits (RAV1) Regulator of (H+)-ATPase in vacuolar membrane Spar (test2) orthologous hit at 89% f3888/3910 (99.4%) over 3910bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3118/4071 (76.6%) over 4074bp for offset 2 Smik (test3) Longest island has f100 at 86% over 3120bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3965/4002 (99.1%) over 4008bp for offset 0 <== THIS IS REAL 0 102030400506070809001k1k1k1k1k 1k1k1k1k1k 2k2k2k2k 2k2k2k2k2k 2k3k3k3k3k 3k3k3k3k3k 3k4k4k |_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_| 100f 86% 3120bp 100f 81% 955bp Sm330full |===================================================================|xxxxxxxxxxxxxxxxxxxxx| YJR033C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR033C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1871 (0.4%). Conflicting: 9/1871 (0.5%). NoInfo: 6/1871 (0.3%). Certain keep: 1849/1871 (98.8%) ########################## YJR034W (327bp = 109AA) has 4 hits (PET191) involved in cytochrome c oxidase assembly Spar (test2) orthologous hit at 91% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL YJR034W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR034W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1872 (0.4%). Conflicting: 9/1872 (0.5%). NoInfo: 6/1872 (0.3%). Certain keep: 1850/1872 (98.8%) ########################## YJR035W (3258bp = 1086AA) has 103 hits (RAD26) DNA-dependent ATPase, homologous ..gene ERCC6 (119) Spar (test2) orthologous hit at 88% f3247/3255 (99.8%) over 3258bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1105/1114 (99.2%) over 1116bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1576/1738 (90.7%) over 1748bp for offset 2 <== THIS IS REAL YJR035W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR035W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1873 (0.4%). Conflicting: 9/1873 (0.5%). NoInfo: 6/1873 (0.3%). Certain keep: 1851/1873 (98.8%) ########################## YJR036C (2679bp = 893AA) has 15 hits (HUL4) ubiquitin-protein ligase (E3) Flanking ORFs are: YJR034W and YJR036C. YJR036C skipped ########################## YJR040W (2340bp = 780AA) has 11 hits (GEF1) putative transport protein involved ..metabolism (112) Spar (test2) orthologous hit at 89% f1740/1740 (100.0%) over 1740bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1560/1560 (100.0%) over 1560bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1083/1083 (100.0%) over 1083bp for offset 0 <== THIS IS REAL YJR040W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR040W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1874 (0.4%). Conflicting: 9/1874 (0.5%). NoInfo: 6/1874 (0.3%). Certain keep: 1852/1874 (98.8%) ########################## YJR042W (2235bp = 745AA) has 8 hits (NUP85) nuclear pore protein Spar (test2) orthologous hit at 90% f2235/2235 (100.0%) over 2235bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f78/84 (92.9%) over 85bp for offset 2 Smik (test3) Longest island has f100 at 81% over 78bp Sbay (test2) orthologous hit at 80% f2210/2230 (99.1%) over 2235bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k2k |___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|_| 100fSm326brkp |xxx| YJR042W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YJR042W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 7/1875 (0.4%). Conflicting: 9/1875 (0.5%). NoInfo: 6/1875 (0.3%). Certain keep: 1853/1875 (98.8%) ########################## YJR043C (1053bp = 351AA) has 13 hits (POL32) third (55 kDa) subunit of DNA polym..rase delta (91) Spar (test2) orthologous hit at 86% f1053/1053 (100.0%) over 1053bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1025/1050 (97.6%) over 1053bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1015/1047 (96.9%) over 1053bp for offset 0 <== THIS IS REAL YJR043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1876 (0.4%). Conflicting: 9/1876 (0.5%). NoInfo: 6/1876 (0.3%). Certain keep: 1854/1876 (98.8%) ########################## YJR044C (423bp = 141AA) has 7 hits (VPS55) YJR044c Spar (test2) orthologous hit at 91% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f423/423 (100.0%) over 423bp for offset 0 <== THIS IS REAL YJR044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1877 (0.4%). Conflicting: 9/1877 (0.5%). NoInfo: 6/1877 (0.3%). Certain keep: 1855/1877 (98.8%) ########################## YJR045C (1965bp = 655AA) has 104 hits (SSC1) Mitochondrial matrix protein involv..donuclease (130) Spar (test2) orthologous hit at 92% f1947/1947 (100.0%) over 1947bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1937/1937 (100.0%) over 1937bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1965/1965 (100.0%) over 1965bp for offset 0 <== THIS IS REAL YJR045C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR045C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1878 (0.4%). Conflicting: 9/1878 (0.5%). NoInfo: 6/1878 (0.3%). Certain keep: 1856/1878 (98.8%) ########################## YJR046W (1815bp = 605AA) has 4 hits (TAH11) Product of gene unknown Spar (test2) orthologous hit at 87% f1808/1813 (99.7%) over 1815bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1793/1811 (99.0%) over 1815bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1778/1801 (98.7%) over 1812bp for offset 0 <== THIS IS REAL YJR046W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR046W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1879 (0.4%). Conflicting: 9/1879 (0.5%). NoInfo: 6/1879 (0.3%). Certain keep: 1857/1879 (98.8%) ########################## YJR047C (474bp = 158AA) has 9 hits (ANB1) anaerobically expressed form of transl..tor eIF-5A (110) Spar (test2) orthologous hit at 96% f474/474 (100.0%) over 474bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 95% f474/474 (100.0%) over 474bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f474/474 (100.0%) over 474bp for offset 0 <== THIS IS REAL YJR047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1880 (0.4%). Conflicting: 9/1880 (0.5%). NoInfo: 6/1880 (0.3%). Certain keep: 1858/1880 (98.8%) ########################## YJR048W (330bp = 110AA) has 7 hits (CYC1) iso-1-cytochrome c Spar (test2) orthologous hit at 93% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f330/330 (100.0%) over 330bp for offset 0 <== THIS IS REAL YJR048W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR048W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1881 (0.4%). Conflicting: 9/1881 (0.5%). NoInfo: 6/1881 (0.3%). Certain keep: 1859/1881 (98.8%) ########################## YJR049C (1593bp = 531AA) has 13 hits (UTR1) involved in ferric reductase activity Spar (test2) orthologous hit at 89% f1590/1590 (100.0%) over 1593bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1589/1591 (99.9%) over 1592bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1576/1592 (99.0%) over 1593bp for offset 0 <== THIS IS REAL YJR049C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR049C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1882 (0.4%). Conflicting: 9/1882 (0.5%). NoInfo: 6/1882 (0.3%). Certain keep: 1860/1882 (98.8%) ########################## YJR050W (708bp = 236AA) has 14 hits (ISY1) interacts with the spliceosome Spar (test2) orthologous hit at 88% f707/707 (100.0%) over 707bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f699/704 (99.3%) over 706bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f604/634 (95.3%) over 637bp for offset 2 <== THIS IS REAL YJR050W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR050W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1883 (0.4%). Conflicting: 9/1883 (0.5%). NoInfo: 6/1883 (0.3%). Certain keep: 1861/1883 (98.8%) ########################## YJR051W (1506bp = 502AA) has 18 hits (OSM1) osmotic growth protein Spar (test2) orthologous hit at 90% f1500/1505 (99.7%) over 1506bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1492/1503 (99.3%) over 1506bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1495/1499 (99.7%) over 1506bp for offset 0 <== THIS IS REAL YJR051W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR051W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1884 (0.4%). Conflicting: 9/1884 (0.5%). NoInfo: 6/1884 (0.3%). Certain keep: 1862/1884 (98.8%) ########################## YJR052W (1698bp = 566AA) has 17 hits (RAD7) nucleotide excision NEF4 component Spar (test2) orthologous hit at 90% f1698/1698 (100.0%) over 1698bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1695/1697 (99.9%) over 1698bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1496/1562 (95.8%) over 1568bp for offset 0 <== THIS IS REAL YJR052W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR052W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1885 (0.4%). Conflicting: 9/1885 (0.5%). NoInfo: 6/1885 (0.3%). Certain keep: 1863/1885 (98.8%) ########################## YJR053W (1725bp = 575AA) has 59 hits (BFA1) similar to Byr4 Spar (test2) orthologous hit at 88% f1720/1725 (99.7%) over 1725bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f1130/1280 (88.3%) over 1306bp for offset 1 Smik (test3) Longest island has f97 at 80% over 1039bp <== THIS IS REAL Sbay (test2) orthologous hit at 72% f595/742 (80.2%) over 755bp for offset 1 Sbay (test3) Longest island has f93 at 77% over 620bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k1k |____|____|____|____|_____|____|____|____|____|_____|____|____|____|_____|____|____|____|_| 97f 80% 1039bp Sm745full |...............|oooooooooooooooooooooooooooooooooooooooooooooooooooo|> 93f 77% 620bp Sb963full |===============================>......> | YJR053W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR053W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1886 (0.4%). Conflicting: 9/1886 (0.5%). NoInfo: 6/1886 (0.3%). Certain keep: 1864/1886 (98.8%) ########################## YJR055W (495bp = 165AA) has 14 hits (HIT1) involved in growth at high temperature Spar (test2) orthologous hit at 81% f223/451 (49.4%) over 452bp for offset 2 Spar (test3) Longest island has f100 at 74% over 223bp Smik (test2) orthologous hit at 77% f482/491 (98.2%) over 491bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f464/489 (94.9%) over 495bp for offset 0 <== THIS IS REAL 0 100 200 300 400 495 |_________________|_________________|_________________|_________________|_________________| 100f 74% 223bp 100f 90% 203bp Sp302brk |....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>|oooooooooooooooooooooooooooooooooooo| YJR055W: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YJR055W - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 7/1887 (0.4%). Conflicting: 9/1887 (0.5%). NoInfo: 6/1887 (0.3%). Certain keep: 1865/1887 (98.8%) ########################## YJR057W (651bp = 217AA) has 7 hits (CDC8) thymidylate kinase Spar (test2) orthologous hit at 89% f651/651 (100.0%) over 651bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f628/646 (97.2%) over 647bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f626/644 (97.2%) over 650bp for offset 0 <== THIS IS REAL YJR057W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR057W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1888 (0.4%). Conflicting: 9/1888 (0.5%). NoInfo: 6/1888 (0.3%). Certain keep: 1866/1888 (98.8%) ########################## YJR058C (444bp = 148AA) has 7 hits (APS2) Clathrin-associated protein, small subunit Spar (test2) orthologous hit at 93% f444/444 (100.0%) over 444bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f444/444 (100.0%) over 444bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f443/443 (100.0%) over 443bp for offset 0 <== THIS IS REAL YJR058C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR058C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1889 (0.4%). Conflicting: 9/1889 (0.5%). NoInfo: 6/1889 (0.3%). Certain keep: 1867/1889 (98.8%) ########################## YJR059W (2457bp = 819AA) has 35 hits (PTK2) putative serine)/threonine kinase in..metabolism (109) Spar (test2) orthologous hit at 91% f2457/2457 (100.0%) over 2457bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2450/2453 (99.9%) over 2456bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2378/2445 (97.3%) over 2457bp for offset 0 <== THIS IS REAL YJR059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1890 (0.4%). Conflicting: 9/1890 (0.5%). NoInfo: 6/1890 (0.3%). Certain keep: 1868/1890 (98.8%) ########################## YJR060W (1056bp = 352AA) has 9 hits (CBF1) basic helix-loop-helix protein Spar (test2) orthologous hit at 88% f1045/1050 (99.5%) over 1056bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f763/805 (94.8%) over 813bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f528/549 (96.2%) over 550bp for offset 0 <== THIS IS REAL YJR060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1891 (0.4%). Conflicting: 9/1891 (0.5%). NoInfo: 6/1891 (0.3%). Certain keep: 1869/1891 (98.8%) ########################## YJR062C (1374bp = 458AA) has 6 hits (NTA1) 52-kDa amidase specific for N-termina.. glutamine (106) Spar (test2) orthologous hit at 86% f1374/1374 (100.0%) over 1374bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1364/1372 (99.4%) over 1374bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1337/1368 (97.7%) over 1374bp for offset 2 <== THIS IS REAL YJR062C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR062C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1892 (0.4%). Conflicting: 9/1892 (0.5%). NoInfo: 6/1892 (0.3%). Certain keep: 1870/1892 (98.8%) ########################## YJR063W (378bp = 126AA) has 6 hits (RPA12) A12.2 subunit of RNA polymerase I Spar (test2) orthologous hit at 94% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL YJR063W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR063W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1893 (0.4%). Conflicting: 9/1893 (0.5%). NoInfo: 6/1893 (0.3%). Certain keep: 1871/1893 (98.8%) ########################## YJR064W (1689bp = 563AA) has 30 hits (CCT5) subunit of chaperonin subunit epsilon Spar (test2) orthologous hit at 92% f1689/1689 (100.0%) over 1689bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1689/1689 (100.0%) over 1689bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1689/1689 (100.0%) over 1689bp for offset 0 <== THIS IS REAL YJR064W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR064W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1894 (0.4%). Conflicting: 9/1894 (0.5%). NoInfo: 6/1894 (0.3%). Certain keep: 1872/1894 (98.8%) ########################## YJR065C (1350bp = 450AA) has 15 hits (ARP3) involved in the function of the acti..toskeleton (94) Spar (test2) orthologous hit at 93% f1350/1350 (100.0%) over 1350bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f849/1350 (62.9%) over 1350bp for offset 1 Smik (test3) Longest island has f100 at 88% over 849bp <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1350/1350 (100.0%) over 1350bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|______|_____|______|______|_____|______|______|_____|______|______|_____|___| 100f 88% 849bp 100f 90% 501bp Sm744full |=======================================================|ooooooooooooooooooooooooooooooooo| YJR065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1895 (0.4%). Conflicting: 9/1895 (0.5%). NoInfo: 6/1895 (0.3%). Certain keep: 1873/1895 (98.8%) ########################## YJR066W (7413bp = 2471AA) has 35 hits (TOR1) phosphatidylinositol kinase homolog Spar (test2) orthologous hit at 91% f7411/7413 (100.0%) over 7413bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f6297/6320 (99.6%) over 6324bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f7393/7405 (99.8%) over 7413bp for offset 0 <== THIS IS REAL YJR066W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR066W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1896 (0.4%). Conflicting: 9/1896 (0.5%). NoInfo: 6/1896 (0.3%). Certain keep: 1874/1896 (98.8%) ########################## YJR067C (426bp = 142AA) has 4 hits (YAE1) Essential protein of unknown function Spar (test2) orthologous hit at 89% f415/418 (99.3%) over 419bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f418/423 (98.8%) over 424bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f418/421 (99.3%) over 422bp for offset 0 <== THIS IS REAL YJR067C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR067C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1897 (0.4%). Conflicting: 9/1897 (0.5%). NoInfo: 6/1897 (0.3%). Certain keep: 1875/1897 (98.8%) ########################## YJR068W (1062bp = 354AA) has 11 hits (RFC2) Subunit 2 of Replication Factor C; h..Da subunit (117) Spar (test2) orthologous hit at 92% f1062/1062 (100.0%) over 1062bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1062/1062 (100.0%) over 1062bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1062/1062 (100.0%) over 1062bp for offset 0 <== THIS IS REAL YJR068W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR068W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1898 (0.4%). Conflicting: 9/1898 (0.5%). NoInfo: 6/1898 (0.3%). Certain keep: 1876/1898 (98.8%) ########################## YJR069C (594bp = 198AA) has 5 hits (HAM1) Product of gene unknown Spar (test2) orthologous hit at 89% f594/594 (100.0%) over 594bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f586/593 (98.8%) over 594bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f589/592 (99.5%) over 593bp for offset 0 <== THIS IS REAL YJR069C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR069C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1899 (0.4%). Conflicting: 9/1899 (0.5%). NoInfo: 6/1899 (0.3%). Certain keep: 1877/1899 (98.8%) ########################## YJR073C (621bp = 207AA) has 4 hits (OPI3) Methylene-fatty-acyl-phospholipid synt..ansferase) (131) Spar (test2) orthologous hit at 91% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f614/620 (99.0%) over 621bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f621/621 (100.0%) over 621bp for offset 0 <== THIS IS REAL YJR073C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR073C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1900 (0.4%). Conflicting: 9/1900 (0.5%). NoInfo: 6/1900 (0.3%). Certain keep: 1878/1900 (98.8%) ########################## YJR074W (657bp = 219AA) has 3 hits (MOG1) nuclear protein that interacts with GTP-Gsp1p Spar (test2) orthologous hit at 89% f657/657 (100.0%) over 657bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f642/657 (97.7%) over 657bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f576/654 (88.1%) over 657bp for offset 0 Sbay (test3) Longest island has f97 at 80% over 588bp <== THIS IS REAL 0 100 200 300 400 500 600 657 |____________|_____________|_____________|____________|_____________|_____________|_______| 97f 80% 588bp Sb963full |..........|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo|> YJR074W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR074W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1901 (0.4%). Conflicting: 9/1901 (0.5%). NoInfo: 6/1901 (0.3%). Certain keep: 1879/1901 (98.8%) ########################## YJR075W (1191bp = 397AA) has 4 hits (HOC1) putative mannosyltransferase Spar (test2) orthologous hit at 90% f1191/1191 (100.0%) over 1191bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1191/1191 (100.0%) over 1191bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1181/1189 (99.3%) over 1191bp for offset 0 <== THIS IS REAL YJR075W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR075W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1902 (0.4%). Conflicting: 9/1902 (0.5%). NoInfo: 6/1902 (0.3%). Certain keep: 1880/1902 (98.8%) ########################## YJR076C (1248bp = 416AA) has 18 hits (CDC11) Component of 10 nm filaments of mot..r-bud neck (92) Spar (test2) orthologous hit at 93% f1248/1248 (100.0%) over 1248bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1248/1248 (100.0%) over 1248bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1248/1248 (100.0%) over 1248bp for offset 0 <== THIS IS REAL YJR076C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR076C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1903 (0.4%). Conflicting: 9/1903 (0.5%). NoInfo: 6/1903 (0.3%). Certain keep: 1881/1903 (98.8%) ########################## YJR077C (936bp = 312AA) has 6 hits (MIR1) Product of gene unknown Spar (test2) orthologous hit at 93% f919/919 (100.0%) over 919bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f935/935 (100.0%) over 935bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL YJR077C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR077C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1904 (0.4%). Conflicting: 9/1904 (0.5%). NoInfo: 6/1904 (0.3%). Certain keep: 1882/1904 (98.8%) ########################## YJR078W (1362bp = 454AA) has 6 hits (BNA2) Hypothetical ORF Flanking ORFs are: YJR076C and YJR078W. YJR078W skipped ########################## YJR082C (342bp = 114AA) has 9 hits (EAF6) YJR082c Spar (test2) orthologous hit at 92% f341/341 (100.0%) over 341bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f342/342 (100.0%) over 342bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f338/341 (99.1%) over 342bp for offset 0 <== THIS IS REAL YJR082C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR082C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1905 (0.4%). Conflicting: 9/1905 (0.5%). NoInfo: 6/1905 (0.3%). Certain keep: 1883/1905 (98.8%) ########################## YJR086W (333bp = 111AA) has 153 hits (STE18) gamma subunit of G protein coupled .. receptors (106) . YJR086W skipped ########################## YJR089W (2865bp = 955AA) has 31 hits (BIR1) Baculoviral IAP Repeat-containing protein Spar (test2) orthologous hit at 78% f2122/2324 (91.3%) over 2347bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 64% f1095/1416 (77.3%) over 1455bp for offset 0 Smik (test3) Longest island has f93 at 72% over 944bp <== THIS IS REAL Sbay (test2) orthologous hit at 69% f975/1106 (88.2%) over 1125bp for offset 0 Sbay (test3) Longest island has f93 at 72% over 977bp <== THIS IS REAL 0 100200300400500600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 2k |__|__|__|__|__|__|__|___|__|__|__|__|__|__|___|__|__|__|__|__|__|___|__|__|__|__|__|__|__| 93f 72% 944bp Sm742full |============================>...............> | 93f 72% 977bp Sb963full |....|==============================| YJR089W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR089W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1906 (0.4%). Conflicting: 9/1906 (0.5%). NoInfo: 6/1906 (0.3%). Certain keep: 1884/1906 (98.8%) ########################## YJR090C (3456bp = 1152AA) has 241 hits (GRR1) cyclin F box protein Spar (test2) orthologous hit at 91% f3338/3343 (99.9%) over 3350bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3446/3454 (99.8%) over 3456bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3391/3440 (98.6%) over 3455bp for offset 1 <== THIS IS REAL YJR090C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR090C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1907 (0.4%). Conflicting: 9/1907 (0.5%). NoInfo: 6/1907 (0.3%). Certain keep: 1885/1907 (98.8%) ########################## YJR091C (3276bp = 1092AA) has 56 hits (JSN1) Benomyl dependent tubulin mutant Spar (test2) orthologous hit at 90% f3227/3230 (99.9%) over 3237bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1766/1781 (99.2%) over 1787bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f3193/3217 (99.3%) over 3227bp for offset 0 <== THIS IS REAL YJR091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1908 (0.4%). Conflicting: 9/1908 (0.5%). NoInfo: 6/1908 (0.3%). Certain keep: 1886/1908 (98.8%) ########################## YJR092W (3963bp = 1321AA) has 38 hits (BUD4) involved in bud site selection Spar (test2) orthologous hit at 85% f3824/3956 (96.7%) over 3963bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f1883/2208 (85.3%) over 2244bp for offset 0 Smik (test3) Longest island has f93 at 71% over 1288bp <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1195/1301 (91.9%) over 1316bp for offset 0 <== THIS IS REAL 0 102030040506070080901k1k 1k1k1k 1k1k1k1k 1k2k2k2k 2k2k2k 2k2k2k2k 3k3k3k3k 3k3k3k 3k3k3k3k |_|_|_|__|_|_|_|__|_|_|_|__|_|_|__|_|_|_|__|_|_|_|__|_|_|__|_|_|_|__|_|_|_|__|_|_|__|_|_|_| 96f 79% 488bp 93f 71% 1288bp Sm742full |==========>....|============================>....> | YJR092W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR092W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1909 (0.4%). Conflicting: 9/1909 (0.5%). NoInfo: 6/1909 (0.3%). Certain keep: 1887/1909 (98.8%) ########################## YJR093C (984bp = 328AA) has 15 hits (FIP1) interacts with poly(A)polymerase Spar (test2) orthologous hit at 89% f980/983 (99.7%) over 984bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f984/984 (100.0%) over 984bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f948/977 (97.0%) over 981bp for offset 0 <== THIS IS REAL YJR093C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR093C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1910 (0.4%). Conflicting: 9/1910 (0.5%). NoInfo: 6/1910 (0.3%). Certain keep: 1888/1910 (98.8%) ########################## YJR094C (1083bp = 361AA) has 50 hits (IME1) transcription factor involved in meiosis Spar (test2) orthologous hit at 88% f1016/1016 (100.0%) over 1016bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f797/842 (94.7%) over 852bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f589/766 (76.9%) over 777bp for offset 2 Sbay (test3) Longest island has f97 at 73% over 378bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|________|_______|_______|________|_______|_______|________|______| 97f 73% 378bp Sb963full |............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>....................| YJR094C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR094C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1911 (0.4%). Conflicting: 9/1911 (0.5%). NoInfo: 6/1911 (0.3%). Certain keep: 1889/1911 (98.8%) ########################## YJR095W (969bp = 323AA) has 10 hits (SFC1) mitochondrial succinate-fumarate tran..rt protein (93) Spar (test2) orthologous hit at 93% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL YJR095W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR095W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1912 (0.4%). Conflicting: 9/1912 (0.5%). NoInfo: 6/1912 (0.3%). Certain keep: 1890/1912 (98.8%) ########################## YJR099W (711bp = 237AA) has 9 hits (YUH1) ubiquitin hydrolase Spar (test2) orthologous hit at 85% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f705/710 (99.3%) over 711bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f692/710 (97.5%) over 711bp for offset 0 <== THIS IS REAL YJR099W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR099W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1913 (0.4%). Conflicting: 9/1913 (0.5%). NoInfo: 6/1913 (0.3%). Certain keep: 1891/1913 (98.8%) ########################## YJR101W (801bp = 267AA) has 5 hits (RSM26) mitochondrial ribosome small subunit component Spar (test2) orthologous hit at 89% f801/801 (100.0%) over 801bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f796/799 (99.6%) over 800bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f458/797 (57.5%) over 801bp for offset 0 Sbay (test3) Longest island has f99 at 84% over 462bp <== THIS IS REAL 0 100 200 300 400 500 600 700 8801 |__________|__________|__________|__________|___________|__________|__________|__________|| 99f 78% 340bp 99f 84% 462bp Sb963full |=====================================|ooooooooooooooooooooooooooooooooooooooooooooooooooo| YJR101W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR101W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1914 (0.4%). Conflicting: 9/1914 (0.5%). NoInfo: 6/1914 (0.3%). Certain keep: 1892/1914 (98.9%) ########################## YJR102C (609bp = 203AA) has 6 hits (VPS25) vacuolar protein sorting (putative) Spar (test2) orthologous hit at 89% f609/609 (100.0%) over 609bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f609/609 (100.0%) over 609bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f603/608 (99.2%) over 609bp for offset 0 <== THIS IS REAL YJR102C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR102C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1915 (0.4%). Conflicting: 9/1915 (0.5%). NoInfo: 6/1915 (0.3%). Certain keep: 1893/1915 (98.9%) ########################## YJR103W (1695bp = 565AA) has 7 hits (URA8) CTP synthase Spar (test2) orthologous hit at 91% f1429/1450 (98.6%) over 1450bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1673/1695 (98.7%) over 1695bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1657/1692 (97.9%) over 1694bp for offset 1 <== THIS IS REAL YJR103W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR103W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1916 (0.4%). Conflicting: 9/1916 (0.5%). NoInfo: 6/1916 (0.3%). Certain keep: 1894/1916 (98.9%) ########################## YJR104C (465bp = 155AA) has 4 hits (SOD1) Cu, Zn superoxide dismutase Spar (test2) orthologous hit at 94% f465/465 (100.0%) over 465bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f465/465 (100.0%) over 465bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f312/465 (67.1%) over 465bp for offset 2 Sbay (test3) Longest island has f100 at 84% over 312bp <== THIS IS REAL 0 100 200 300 400 465 |__________________|__________________|___________________|__________________|____________| 100f 84% 312bp Sb963full |.............................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YJR104C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR104C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1917 (0.4%). Conflicting: 9/1917 (0.5%). NoInfo: 6/1917 (0.3%). Certain keep: 1895/1917 (98.9%) ########################## YJR105W (1023bp = 341AA) has 5 hits (ADO1) adenosine kinase Spar (test2) orthologous hit at 93% f1023/1023 (100.0%) over 1023bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1022/1022 (100.0%) over 1022bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 86% f933/940 (99.3%) over 942bp for offset 2 <== THIS IS REAL YJR105W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR105W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1918 (0.4%). Conflicting: 9/1918 (0.5%). NoInfo: 6/1918 (0.3%). Certain keep: 1896/1918 (98.9%) ########################## YJR106W (2178bp = 726AA) has 7 hits (ECM27) (putative) involved in cell wall biogenesis Spar (test2) orthologous hit at 89% f1196/2177 (54.9%) over 2178bp for offset 0 Spar (test3) Longest island has f100 at 89% over 1202bp <== THIS IS REAL Smik (test2) orthologous hit at 83% f2177/2178 (100.0%) over 2178bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2136/2144 (99.6%) over 2151bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k |___|___|___|___|___|___|___|____|___|___|___|___|___|___|___|____|___|___|___|___|___|___| 100f 89% 1202bp 100f 90% 978bp Sp308full |================================================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YJR106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 7/1919 (0.4%). Conflicting: 9/1919 (0.5%). NoInfo: 6/1919 (0.3%). Certain keep: 1897/1919 (98.9%) ########################## YJR108W (372bp = 124AA) has 10 hits (ABM1) ABerrant Microtubules Spar (test2) orthologous hit at 83% f215/264 (81.4%) over 265bp for offset 0 Spar (test3) Longest island has f100 at 88% over 215bp Spar (test2) orthologous hit at 69% f147/249 (59.0%) over 260bp for offset 0 Spar (test3) Longest island has f97 at 86% over 122bp Smik (test2) orthologous hit at 87% f241/280 (86.1%) over 282bp for offset 0 Smik (test3) Longest island has f100 at 91% over 182bp Smik (test2) orthologous hit at 74% f62/106 (58.5%) over 108bp for offset 2 Smik (test3) Longest island has f93 at 78% over 67bp Sbay (test2) orthologous hit at 79% f162/201 (80.6%) over 202bp for offset 2 Sbay (test3) Longest island has f100 at 85% over 162bp Sbay (test2) orthologous hit at 71% f79/120 (65.8%) over 121bp for offset 1 Sbay (test3) Longest island has f100 at 82% over 77bp Sbay (test2) orthologous hit at 64% f59/104 (56.7%) over 105bp for offset 0 Sbay (test3) Longest island has f90 at 69% over 42bp 0 100 200 300 372 |_______________________|_______________________|_______________________|_________________| 100f 88% 215bp Sp308full |===================================================>..........> | 97f 86% 122bp 100f 40% 1581f 63% 16bp 100f 59% 17bp Sp308full |============================>.......|==>.......|xxx>.........|ooo> | 100f 86% 59bp 100f 92100f 91% 182bp 100Sm741full |=============|ooooo>|===========================================|xx| 10093f 78% 67bp 100f 77% 26bp Sm741full |==|xxxxxxxxxxxxxxx>|=====> | 100f 85% 162bp 100f 59%Sb716full |.|oooooooooooooooooooooooooooooooooooooo>|=======| 100f 82% 77bp 69f 56% 48bp Sb716full |=================>|oooooooooo> | 100f 100f100f 7190f 69% 42bp Sb716full ||====|oo>|xxxxx>|=========> | YJR108W: kill: Spar Spar Sbay Sbay Sbay - keep: YJR108W - Certain Kill. Kill (Spar Sbay) and Keep () Current total: Certain kills: 8/1920 (0.4%). Conflicting: 9/1920 (0.5%). NoInfo: 6/1920 (0.3%). Certain keep: 1897/1920 (98.8%) ########################## YJR109C (3357bp = 1119AA) has 26 hits (CPA2) carbamyl phosphate synthetase Spar (test2) orthologous hit at 92% f3357/3357 (100.0%) over 3357bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f3223/3357 (96.0%) over 3357bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f3355/3355 (100.0%) over 3355bp for offset 0 <== THIS IS REAL YJR109C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR109C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1921 (0.4%). Conflicting: 9/1921 (0.5%). NoInfo: 6/1921 (0.3%). Certain keep: 1898/1921 (98.8%) ########################## YJR112W (606bp = 202AA) has 3 hits (NNF1) nuclear envelope protein Spar (test2) orthologous hit at 89% f606/606 (100.0%) over 606bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f606/606 (100.0%) over 606bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f606/606 (100.0%) over 606bp for offset 0 <== THIS IS REAL YJR112W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR112W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1922 (0.4%). Conflicting: 9/1922 (0.5%). NoInfo: 6/1922 (0.3%). Certain keep: 1899/1922 (98.8%) ########################## YJR113C (744bp = 248AA) has 4 hits (RSM7) mitochondrial ribosome small subunit component Flanking ORFs are: YJR111C and YJR113C. YJR113C skipped ########################## YJR117W (1362bp = 454AA) has 5 hits (STE24) zinc metallo-protease that catalyzes.. precursor (152) Spar (test2) orthologous hit at 92% f1362/1362 (100.0%) over 1362bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1362/1362 (100.0%) over 1362bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1362/1362 (100.0%) over 1362bp for offset 0 <== THIS IS REAL YJR117W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR117W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1923 (0.4%). Conflicting: 9/1923 (0.5%). NoInfo: 6/1923 (0.3%). Certain keep: 1900/1923 (98.8%) ########################## YJR118C (612bp = 204AA) has 73 hits (ILM1) Product of gene unknown Spar (test2) orthologous hit at 90% f582/582 (100.0%) over 582bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f580/592 (98.0%) over 593bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f565/591 (95.6%) over 594bp for offset 0 <== THIS IS REAL YJR118C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR118C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1924 (0.4%). Conflicting: 9/1924 (0.5%). NoInfo: 6/1924 (0.3%). Certain keep: 1901/1924 (98.8%) ########################## YJR121W (1536bp = 512AA) has 8 hits (ATP2) F(1)F(0)-ATPase complex beta subunit,..ochondrial (94) Spar (test2) orthologous hit at 94% f1536/1536 (100.0%) over 1536bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 92% f1536/1536 (100.0%) over 1536bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f1536/1536 (100.0%) over 1536bp for offset 0 <== THIS IS REAL YJR121W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR121W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1925 (0.4%). Conflicting: 9/1925 (0.5%). NoInfo: 6/1925 (0.3%). Certain keep: 1902/1925 (98.8%) ########################## YJR122W (1494bp = 498AA) has 7 hits (CAF17) component of CCR4 transcriptional complex Spar (test2) orthologous hit at 86% f1489/1492 (99.8%) over 1493bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1454/1488 (97.7%) over 1494bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1355/1376 (98.5%) over 1379bp for offset 0 <== THIS IS REAL YJR122W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR122W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1926 (0.4%). Conflicting: 9/1926 (0.5%). NoInfo: 6/1926 (0.3%). Certain keep: 1903/1926 (98.8%) ########################## YJR123W (678bp = 226AA) has 7 hits (RPS5) Ribosomal protein S5 (S2) (rp14) (YS8) Spar (test2) orthologous hit at 98% f678/678 (100.0%) over 678bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 97% f678/678 (100.0%) over 678bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 97% f678/678 (100.0%) over 678bp for offset 0 <== THIS IS REAL YJR123W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR123W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1927 (0.4%). Conflicting: 9/1927 (0.5%). NoInfo: 6/1927 (0.3%). Certain keep: 1904/1927 (98.8%) ########################## YJR125C (1227bp = 409AA) has 19 hits (ENT3) Ent3p Spar (test2) orthologous hit at 89% f1227/1227 (100.0%) over 1227bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1213/1224 (99.1%) over 1227bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1078/1212 (88.9%) over 1227bp for offset 0 Sbay (test3) Longest island has f99 at 82% over 775bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k1k |______|______|_______|______|______|_______|______|______|_______|______|______|_______|_| 99f 82% 775bp 92f 76% 275bp Sb717full |=======================================================>..............|==================|> YJR125C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR125C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1928 (0.4%). Conflicting: 9/1928 (0.5%). NoInfo: 6/1928 (0.3%). Certain keep: 1905/1928 (98.8%) ########################## YJR126C (2436bp = 812AA) has 7 hits (VPS70) Spar (test2) orthologous hit at 90% f2404/2421 (99.3%) over 2421bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2412/2431 (99.2%) over 2434bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2370/2407 (98.5%) over 2414bp for offset 2 <== THIS IS REAL YJR126C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR126C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1929 (0.4%). Conflicting: 9/1929 (0.5%). NoInfo: 6/1929 (0.3%). Certain keep: 1906/1929 (98.8%) ########################## YJR127C (4143bp = 1381AA) has 71 hits (ZMS1) Product of gene unknown Flanking ORFs are: YJR125C and YJR127C. YJR127C skipped ########################## YJR130C (1920bp = 640AA) has 20 hits (STR2) Cystathionine gamma-synthase Spar (test2) orthologous hit at 89% f1920/1920 (100.0%) over 1920bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1919/1919 (100.0%) over 1919bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1906/1917 (99.4%) over 1920bp for offset 0 <== THIS IS REAL YJR130C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR130C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1930 (0.4%). Conflicting: 9/1930 (0.5%). NoInfo: 6/1930 (0.3%). Certain keep: 1907/1930 (98.8%) ########################## YJR131W (1650bp = 550AA) has 7 hits (MNS1) specific alpha-mannosidase Spar (test2) orthologous hit at 88% f1650/1650 (100.0%) over 1650bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1631/1647 (99.0%) over 1650bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1057/1121 (94.3%) over 1131bp for offset 2 <== THIS IS REAL YJR131W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR131W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1931 (0.4%). Conflicting: 9/1931 (0.5%). NoInfo: 6/1931 (0.3%). Certain keep: 1908/1931 (98.8%) ########################## YJR132W (3147bp = 1049AA) has 18 hits (NMD5) importin beta homolog, Kap119p; Upf..ng protein (102) Spar (test2) orthologous hit at 90% f3147/3147 (100.0%) over 3147bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2932/2969 (98.8%) over 2976bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f73/73 (100.0%) over 73bp for offset 0 Sbay (test3) Longest island has f100 at 84% over 73bp 0 100200300400500600708009001k 1k 1k 1k 1k1k 1k 1k 1k 1k 2k 2k2k 2k 2k 2k 2k 2k 2k2k 3k 3k3k |_|__|__|__|__|__|__|_|__|__|__|__|__|__|_|__|__|__|__|__|__|_|__|__|__|__|__|__|_|__|__|_| 100Sb603brkb |==| YJR132W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YJR132W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/1932 (0.4%). Conflicting: 9/1932 (0.5%). NoInfo: 6/1932 (0.3%). Certain keep: 1909/1932 (98.8%) ########################## YJR133W (630bp = 210AA) has 8 hits (XPT1) Xanthine Phosphoribosyl Transferase Spar (test2) orthologous hit at 91% f630/630 (100.0%) over 630bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f628/628 (100.0%) over 628bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f630/630 (100.0%) over 630bp for offset 0 <== THIS IS REAL YJR133W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR133W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1933 (0.4%). Conflicting: 9/1933 (0.5%). NoInfo: 6/1933 (0.3%). Certain keep: 1910/1933 (98.8%) ########################## YJR134C (2124bp = 708AA) has 126 hits (SGM1) Product of gene unknown Spar (test2) orthologous hit at 87% f2120/2123 (99.9%) over 2124bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2053/2111 (97.3%) over 2124bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2078/2116 (98.2%) over 2124bp for offset 0 <== THIS IS REAL YJR134C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR134C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1934 (0.4%). Conflicting: 9/1934 (0.5%). NoInfo: 6/1934 (0.3%). Certain keep: 1911/1934 (98.8%) ########################## YJR135C (720bp = 240AA) has 9 hits (MCM22) Required for maintenance of chromosom..hromosomes (102) Spar (test2) orthologous hit at 85% f720/720 (100.0%) over 720bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f704/716 (98.3%) over 720bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f697/716 (97.3%) over 720bp for offset 0 <== THIS IS REAL YJR135C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR135C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1935 (0.4%). Conflicting: 9/1935 (0.5%). NoInfo: 6/1935 (0.3%). Certain keep: 1912/1935 (98.8%) ########################## YJR135W-A (264bp = 88AA) has 9 hits (TIM8) Subunit of mitochondrial protein impo.. machinery (92) Spar (test2) orthologous hit at 92% f264/264 (100.0%) over 264bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f264/264 (100.0%) over 264bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f264/264 (100.0%) over 264bp for offset 0 <== THIS IS REAL YJR135W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR135W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1936 (0.4%). Conflicting: 9/1936 (0.5%). NoInfo: 6/1936 (0.3%). Certain keep: 1913/1936 (98.8%) ########################## YJR137C (4329bp = 1443AA) has 11 hits (ECM17) Putative sulfite reductase Spar (test2) orthologous hit at 91% f4329/4329 (100.0%) over 4329bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f4328/4328 (100.0%) over 4328bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f4321/4326 (99.9%) over 4328bp for offset 0 <== THIS IS REAL YJR137C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR137C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1937 (0.4%). Conflicting: 9/1937 (0.5%). NoInfo: 6/1937 (0.3%). Certain keep: 1914/1937 (98.8%) ########################## YJR138W (4755bp = 1585AA) has 25 hits (IML1) Product of gene unknown Spar (test2) orthologous hit at 90% f4747/4754 (99.9%) over 4755bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f4542/4572 (99.3%) over 4586bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f4493/4554 (98.7%) over 4563bp for offset 0 <== THIS IS REAL YJR138W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR138W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1938 (0.4%). Conflicting: 9/1938 (0.5%). NoInfo: 6/1938 (0.3%). Certain keep: 1915/1938 (98.8%) ########################## YJR139C (1080bp = 360AA) has 6 hits (HOM6) Homoserine dehydrogenase (L-homoserin..reductase) (102) Spar (test2) orthologous hit at 93% f1080/1080 (100.0%) over 1080bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1080/1080 (100.0%) over 1080bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1074/1078 (99.6%) over 1079bp for offset 0 <== THIS IS REAL YJR139C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR139C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1939 (0.4%). Conflicting: 9/1939 (0.5%). NoInfo: 6/1939 (0.3%). Certain keep: 1916/1939 (98.8%) ########################## YJR140C (4947bp = 1649AA) has 22 hits (HIR3) regulator of histone transcription Spar (test2) orthologous hit at 89% f4936/4944 (99.8%) over 4947bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f4920/4941 (99.6%) over 4947bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f4867/4935 (98.6%) over 4947bp for offset 0 <== THIS IS REAL YJR140C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR140C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1940 (0.4%). Conflicting: 9/1940 (0.5%). NoInfo: 6/1940 (0.3%). Certain keep: 1917/1940 (98.8%) ########################## YJR143C (2289bp = 763AA) (tdist=45.1k) has 16 hits (PMT4) dolichyl phosphate-D-m..ransferase (118) Spar (test2) orthologous hit at 91% f2216/2222 (99.7%) over 2223bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2285/2288 (99.9%) over 2289bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1974/2287 (86.3%) over 2289bp for offset 2 Sbay (test3) Longest island has f100 at 83% over 1978bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k |__|___|___|___|___|___|___|___|___|___|___|___|___|___|__|___|___|___|___|___|___|___|___| 100f 81% 311100f 83% 1978bp Sb603full |===========|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YJR143C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR143C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1941 (0.4%). Conflicting: 9/1941 (0.5%). NoInfo: 6/1941 (0.3%). Certain keep: 1918/1941 (98.8%) ########################## YJR144W (810bp = 270AA) (tdist=44.0k) has 4 hits (MGM101) (putative) nucleic aci..interactor (92) Spar (test2) orthologous hit at 90% f810/810 (100.0%) over 810bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f803/806 (99.6%) over 810bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f787/807 (97.5%) over 810bp for offset 0 <== THIS IS REAL YJR144W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR144W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1942 (0.4%). Conflicting: 9/1942 (0.5%). NoInfo: 6/1942 (0.3%). Certain keep: 1919/1942 (98.8%) ########################## YJR147W (1077bp = 359AA) (tdist=40.4k) has 6 hits (HMS2) heat shock transcriptio..or homolog (96) Flanking ORFs are: YJR143C and YJR145C. YJR147W skipped ########################## YJR148W (1131bp = 377AA) (tdist=38.8k) has 11 hits (BAT2) Branched-Chain Amino A..ansaminase (96) Spar (test2) orthologous hit at 89% f1123/1130 (99.4%) over 1131bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1124/1130 (99.5%) over 1131bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1122/1129 (99.4%) over 1131bp for offset 0 <== THIS IS REAL YJR148W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR148W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1943 (0.4%). Conflicting: 9/1943 (0.5%). NoInfo: 6/1943 (0.3%). Certain keep: 1920/1943 (98.8%) ########################## YJR150C (897bp = 299AA) (tdist=36.0k) has 127 hits (DAN1) Protein induced during..bic growth (97) Spar (test2) orthologous hit at 78% f675/750 (90.0%) over 764bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 68% f689/844 (81.6%) over 873bp for offset 2 Smik (test3) Longest island has f89 at 75% over 636bp Smik (test2) orthologous hit at 75% f373/403 (92.6%) over 412bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 63% f726/842 (86.2%) over 866bp for offset 0 Sbay (test3) Longest island has f92 at 70% over 511bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 897 |_________|_________|_________|_________|_________|_________|_________|_________|_________| 89f 75% 636bp Sm740full |==============================================================>.......................> | 92f 70% 511bp Sb602full |==================================================>..................................> | YJR150C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR150C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1944 (0.4%). Conflicting: 9/1944 (0.5%). NoInfo: 6/1944 (0.3%). Certain keep: 1921/1944 (98.8%) ########################## YJR151C (3486bp = 1162AA) (tdist=30.0k) has 337 hits (DAN4) Spar (test2) orthologous hit at 64% f1824/2207 (82.6%) over 2264bp for offset 0 Spar (test3) Longest island has f97 at 74% over 1062bp <== THIS IS REAL Smik (test2) orthologous hit at 81% f272/272 (100.0%) over 272bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 59% f1695/2079 (81.5%) over 2165bp for offset 0 Sbay (test3) Longest island has f88 at 68% over 905bp Sbay (test2) orthologous hit at 55% f1119/1532 (73.0%) over 1599bp for offset 0 Sbay (test3) Longest island has f80 at 55% over 379bp Sbay (test2) orthologous hit at 63% f674/800 (84.3%) over 826bp for offset 0 Sbay (test3) Longest island has f97 at 71% over 458bp <== THIS IS REAL 0 100203004050060070800901k 1k1k 1k 1k1k 1k1k 1k 1k2k 2k2k 2k2k 2k 2k2k 2k2k 3k 3k3k 3k3k 3k |_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|__|_|__|_|__| 97f 74% 1062bp 76f 60% 496bp81f 54% 329bp Sp312full |==========================>..|============|========>.....> | 88f 68% 905bp 85f 61% 374bp Sb602full |======================>...|=========>.................> | 80f 55% 3781f 54% 208bp Sb602full |....|=========|=====>...................> | 97f 71% 458bp Sb602full |==========>.........> | YJR151C: kill: Sbay Sbay - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR151C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1945 (0.4%). Conflicting: 9/1945 (0.5%). NoInfo: 6/1945 (0.3%). Certain keep: 1922/1945 (98.8%) ########################## YJR152W (1632bp = 544AA) (tdist=24.4k) has 8 hits (DAL5) allantoate permease Spar (test2) orthologous hit at 91% f1632/1632 (100.0%) over 1632bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1629/1631 (99.9%) over 1632bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1618/1618 (100.0%) over 1618bp for offset 0 <== THIS IS REAL YJR152W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR152W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1946 (0.4%). Conflicting: 9/1946 (0.5%). NoInfo: 6/1946 (0.3%). Certain keep: 1923/1946 (98.8%) ########################## YJR153W (1086bp = 362AA) (tdist=21.8k) has 10 hits (PGU1) Endo-polygalacturonase Spar (test2) orthologous hit at 89% f1086/1086 (100.0%) over 1086bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1083/1085 (99.8%) over 1086bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1082/1084 (99.8%) over 1085bp for offset 0 <== THIS IS REAL YJR153W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR153W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1947 (0.4%). Conflicting: 9/1947 (0.5%). NoInfo: 6/1947 (0.3%). Certain keep: 1924/1947 (98.8%) ########################## YJR155W (867bp = 289AA) (tdist=17.4k) has 12 hits (AAD10) Hypothetical aryl-alco..nase (AAD) (103) Spar (test2) orthologous hit at 86% f860/860 (100.0%) over 860bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f863/865 (99.8%) over 866bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f854/865 (98.7%) over 867bp for offset 0 <== THIS IS REAL YJR155W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR155W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1948 (0.4%). Conflicting: 9/1948 (0.5%). NoInfo: 6/1948 (0.3%). Certain keep: 1925/1948 (98.8%) ########################## YJR156C (1023bp = 341AA) (tdist=16.1k) has 31 hits (THI11) Thiamine biosynthetic enzyme Spar (test2) orthologous hit at 93% f565/565 (100.0%) over 565bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 91% f758/758 (100.0%) over 758bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 88% f1015/1021 (99.4%) over 1023bp for offset 0 <== THIS IS REAL YJR156C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR156C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1949 (0.4%). Conflicting: 9/1949 (0.5%). NoInfo: 6/1949 (0.3%). Certain keep: 1926/1949 (98.8%) ########################## YJR158W (1704bp = 568AA) (tdist=11.6k) has 96 hits (HXT16) hexose permease Spar (test2) non-orthologous hit at 85% f1704/1704 (100.0%) over 1704bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 65% f1327/1488 (89.2%) over 1517bp for offset 1 Smik (test3) Longest island has f94 at 67% over 860bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 64% f1327/1588 (83.6%) over 1623bp for offset 1 Sbay (test3) Longest island has f91 at 67% over 818bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 11k |____|____|____|_____|____|____|____|_____|____|____|_____|____|____|____|_____|____|____|| 90f 65% 500bp 94f 67% 860bp Sm364full |......|ooooooooooooooooooooooooo>|ooooooooooooooooooooooooooooooooooooooooooooo> | 88f 64% 532bp 91f 67% 818bp Sb447full |...........|xxxxxxxxxxxxxxxxxxxxxxxxxxx|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.>| YJR158W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR158W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1950 (0.4%). Conflicting: 9/1950 (0.5%). NoInfo: 6/1950 (0.3%). Certain keep: 1927/1950 (98.8%) ########################## YJR159W (1074bp = 358AA) (tdist=8.6k) has 26 hits (SOR1) sorbitol-induced sorbit..ydrogenase (96) Spar (test2) non-orthologous hit at 90% f1070/1073 (99.7%) over 1074bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1067/1073 (99.4%) over 1074bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f1070/1073 (99.7%) over 1074bp for offset 0 <== THIS IS REAL YJR159W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR159W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1951 (0.4%). Conflicting: 9/1951 (0.5%). NoInfo: 6/1951 (0.3%). Certain keep: 1928/1951 (98.8%) ########################## YJR161C (1152bp = 384AA) (tdist=1.7k) has 69 hits (COS5) Protein with similarity..ric region (165) Spar (test2) non-orthologous hit at 80% f1120/1142 (98.1%) over 1152bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 76% f1056/1137 (92.9%) over 1152bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 65% f580/1132 (51.2%) over 1150bp for offset 2 Sbay (test3) Longest island has f98 at 67% over 384bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|______|_______|_______|_______|_______|______|____| 98f 67% 384bp 95f 70% 378bp Sb206full |.......................|============================>.......|xxxxxxxxxxxxxxxxxxxxxxxxxxxx| YJR161C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YJR161C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1952 (0.4%). Conflicting: 9/1952 (0.5%). NoInfo: 6/1952 (0.3%). Certain keep: 1929/1952 (98.8%) ########################## YKL221W (1422bp = 474AA) (tdist=6.1k) has 11 hits (MCH2) monocarboxylate permeas.. homologue (91) Spar (test2) orthologous hit at 89% f1422/1422 (100.0%) over 1422bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f1368/1389 (98.5%) over 1396bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 78% f1374/1412 (97.3%) over 1421bp for offset 0 <== THIS IS REAL YKL221W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL221W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1953 (0.4%). Conflicting: 9/1953 (0.5%). NoInfo: 6/1953 (0.3%). Certain keep: 1930/1953 (98.8%) ########################## YKL220C (2136bp = 712AA) (tdist=9.0k) has 26 hits (FRE2) Ferric reductase Spar (test2) orthologous hit at 89% f2136/2136 (100.0%) over 2136bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 76% f2072/2127 (97.4%) over 2134bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f2095/2129 (98.4%) over 2136bp for offset 0 <== THIS IS REAL YKL220C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL220C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1954 (0.4%). Conflicting: 9/1954 (0.5%). NoInfo: 6/1954 (0.3%). Certain keep: 1931/1954 (98.8%) ########################## YKL219W (1224bp = 408AA) (tdist=14.4k) has 83 hits (COS9) Protein with similarit..s6p, Cos9p (183) Spar (test2) orthologous hit at 81% f633/1118 (56.6%) over 1125bp for offset 2 Spar (test3) Longest island has f98 at 85% over 645bp <== THIS IS REAL Smik (test2) orthologous hit at 74% f911/971 (93.8%) over 984bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 63% f523/1050 (49.8%) over 1078bp for offset 2 Sbay (test3) Longest island has f89 at 66% over 440bp Sbay (test2) non-orthologous hit at 63% f799/1023 (78.1%) over 1055bp for offset 0 Sbay (test3) Longest island has f93 at 67% over 258bp Sbay (test2) non-orthologous hit at 63% f558/1026 (54.4%) over 1055bp for offset 0 Sbay (test3) Longest island has f80 at 66% over 265bp Sbay (test2) non-orthologous hit at 60% f470/761 (61.8%) over 788bp for offset 0 Sbay (test3) Longest island has f83 at 54% over 212bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k1k |______|______|_______|______|______|_______|______|______|_______|______|______|_______|_| 97f 78% 485bp 98f 85% 645bp Sp445full |===================================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 89f 66% 440bp 96f 71% 296bp Sb206full |.................|================================>........|xxxxxxxxxxxxxxxxxxx|x> 87f 70% 223bp 93f 67% 258bp Sb601full |..............|===============>.............................|================|=> 80f 66% 265bp 100f 71% 202bSb606full |...........|===================>................................|============|> 79f 70% 80f 61% 117bp 83f 54% 212bp 89f 65% 136bp Sb1016brk |.....|xxxxxxx|========>.......|===============>|=========> | YKL219W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YKL219W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/1955 (0.4%). Conflicting: 9/1955 (0.5%). NoInfo: 6/1955 (0.3%). Certain keep: 1932/1955 (98.8%) ########################## YKL218C (981bp = 327AA) (tdist=17.3k) has 5 hits (SRY1) Pyridoxal-5'phosphate-de..e racemase (136) Spar (test2) orthologous hit at 88% f981/981 (100.0%) over 981bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f829/973 (85.2%) over 981bp for offset 0 Smik (test3) Longest island has f99 at 84% over 835bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 65% f60/130 (46.2%) over 141bp for offset 0 Sbay (test3) Longest island has f77 at 60% over 48bp 0 100 200 300 400 500 600 700 800 900 981 |________|________|________|________|________|_________|________|________|________|_______| 99f 84% 835bp Sm1028ful |............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 1067f77f 10071f 71% 14bp Sb206full |>|=>|ooo|=>|> | YKL218C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YKL218C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/1956 (0.4%). Conflicting: 9/1956 (0.5%). NoInfo: 6/1956 (0.3%). Certain keep: 1933/1956 (98.8%) ########################## YKL217W (1851bp = 617AA) (tdist=22.2k) has 5 hits (JEN1) carboxylic acid transpo..in homolog (100) Spar (test2) orthologous hit at 91% f1847/1850 (99.8%) over 1851bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1842/1845 (99.8%) over 1846bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1827/1842 (99.2%) over 1846bp for offset 0 <== THIS IS REAL YKL217W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL217W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1957 (0.4%). Conflicting: 9/1957 (0.5%). NoInfo: 6/1957 (0.3%). Certain keep: 1934/1957 (98.8%) ########################## YKL216W (945bp = 315AA) (tdist=25.2k) has 8 hits (URA1) dihydroorotate dehydrogenase Spar (test2) orthologous hit at 92% f945/945 (100.0%) over 945bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f945/945 (100.0%) over 945bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f941/944 (99.7%) over 945bp for offset 0 <== THIS IS REAL YKL216W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL216W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1958 (0.4%). Conflicting: 9/1958 (0.5%). NoInfo: 6/1958 (0.3%). Certain keep: 1935/1958 (98.8%) ########################## YKL214C (612bp = 204AA) (tdist=31.0k) has 5 hits (YRA2) Yeast RNA ..ng protein (104) Spar (test2) orthologous hit at 91% f608/609 (99.8%) over 612bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f598/608 (98.4%) over 612bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f485/593 (81.8%) over 603bp for offset 0 Sbay (test3) Longest island has f99 at 81% over 457bp <== THIS IS REAL 0 100 200 300 400 500 60612 |_____________|______________|______________|_____________|______________|______________|_| 99f 81% 457bp Sb250full |......................|=================================================================|> YKL214C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL214C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1959 (0.4%). Conflicting: 9/1959 (0.5%). NoInfo: 6/1959 (0.3%). Certain keep: 1936/1959 (98.8%) ########################## YKL213C (2148bp = 716AA) (tdist=31.9k) has 11 hits (DOA1) phospholipase A2-activ..ng protein (93) Spar (test2) orthologous hit at 88% f2144/2148 (99.8%) over 2148bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2139/2146 (99.7%) over 2148bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1153/1511 (76.3%) over 1524bp for offset 2 Sbay (test3) Longest island has f99 at 79% over 598bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k |___|___|___|___|___|____|___|___|___|___|____|___|___|___|___|____|___|___|___|___|___|__| 100f 81% 501bp 97f 76% 2599f 79% 598bp Sb250full |====================|ooooooooo|========================>......> | YKL213C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL213C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1960 (0.4%). Conflicting: 9/1960 (0.5%). NoInfo: 6/1960 (0.3%). Certain keep: 1937/1960 (98.8%) ########################## YKL212W (1872bp = 624AA) (tdist=34.5k) has 7 hits (SAC1) integral membrane prote.. and Golgi (113) Spar (test2) orthologous hit at 91% f1872/1872 (100.0%) over 1872bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1850/1869 (99.0%) over 1872bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1849/1868 (99.0%) over 1872bp for offset 0 <== THIS IS REAL YKL212W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL212W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1961 (0.4%). Conflicting: 9/1961 (0.5%). NoInfo: 6/1961 (0.3%). Certain keep: 1938/1961 (98.8%) ########################## YKL211C (1455bp = 485AA) (tdist=36.7k) has 7 hits (TRP3) anthranilate synthase C..al enzyme) (139) Spar (test2) orthologous hit at 91% f1455/1455 (100.0%) over 1455bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1452/1454 (99.9%) over 1455bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1444/1452 (99.4%) over 1455bp for offset 0 <== THIS IS REAL YKL211C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL211C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1962 (0.4%). Conflicting: 9/1962 (0.5%). NoInfo: 6/1962 (0.3%). Certain keep: 1939/1962 (98.8%) ########################## YKL210W (3075bp = 1025AA) (tdist=39.1k) has 7 hits (UBA1) ubiquitin activating e..r to Uba2p (103) Spar (test2) orthologous hit at 91% f3074/3075 (100.0%) over 3075bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3073/3075 (99.9%) over 3075bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f3071/3074 (99.9%) over 3075bp for offset 0 <== THIS IS REAL YKL210W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL210W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1963 (0.4%). Conflicting: 9/1963 (0.5%). NoInfo: 6/1963 (0.3%). Certain keep: 1940/1963 (98.8%) ########################## YKL209C (3873bp = 1291AA) (tdist=42.4k) has 27 hits (STE6) ABC transporter, glyc..ry pathway (129) Spar (test2) orthologous hit at 88% f3217/3228 (99.7%) over 3231bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f3827/3860 (99.1%) over 3865bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f3762/3850 (97.7%) over 3866bp for offset 0 <== THIS IS REAL YKL209C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL209C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1964 (0.4%). Conflicting: 9/1964 (0.5%). NoInfo: 6/1964 (0.3%). Certain keep: 1941/1964 (98.8%) ########################## YKL208W (816bp = 272AA) (tdist=47.1k) has 5 hits (CBT1) involved in RNA splicing Spar (test2) orthologous hit at 85% f816/816 (100.0%) over 816bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f798/806 (99.0%) over 808bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f785/808 (97.2%) over 816bp for offset 0 <== THIS IS REAL YKL208W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL208W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1965 (0.4%). Conflicting: 9/1965 (0.5%). NoInfo: 6/1965 (0.3%). Certain keep: 1942/1965 (98.8%) ########################## YKL205W (3303bp = 1101AA) has 68 hits (LOS1) nuclear protein LOS1 Spar (test2) orthologous hit at 92% f3295/3302 (99.8%) over 3303bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2665/2667 (99.9%) over 2667bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 65% f1782/2632 (67.7%) over 2709bp for offset 2 Sbay (test3) Longest island has f98 at 83% over 1292bp <== THIS IS REAL 0 10020030400500600708009001k1k 1k 1k 1k1k 1k 1k 1k1k 2k 2k2k 2k 2k 2k2k 2k 2k 2k3k 3k 3k33k |_|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|__|_|__|__|_|| 98f 83% 1292bp Sb250full |.......................................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YKL205W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL205W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1966 (0.4%). Conflicting: 9/1966 (0.5%). NoInfo: 6/1966 (0.3%). Certain keep: 1943/1966 (98.8%) ########################## YKL204W (1899bp = 633AA) has 20 hits (EAP1) probable purine nucleotide-binding protein Spar (test2) orthologous hit at 90% f1893/1896 (99.8%) over 1899bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1861/1893 (98.3%) over 1899bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1261/1261 (100.0%) over 1261bp for offset 0 <== THIS IS REAL YKL204W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL204W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1967 (0.4%). Conflicting: 9/1967 (0.5%). NoInfo: 6/1967 (0.3%). Certain keep: 1944/1967 (98.8%) ########################## YKL203C (7422bp = 2474AA) has 37 hits (TOR2) phosphatidylinositol kinase homolg Spar (test2) orthologous hit at 91% f7409/7421 (99.8%) over 7422bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f7410/7420 (99.9%) over 7422bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f7397/7416 (99.7%) over 7422bp for offset 0 <== THIS IS REAL YKL203C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL203C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1968 (0.4%). Conflicting: 9/1968 (0.5%). NoInfo: 6/1968 (0.3%). Certain keep: 1945/1968 (98.8%) ########################## YKL201C (3537bp = 1179AA) has 2914 hits (MNN4) involved in mannose metabolism Flanking ORFs are: YKL204W and YKL202W. YKL201C skipped ########################## YKL199C (840bp = 280AA) has 9 hits (YKT9) Protein of unknown function Flanking ORFs are: YKL204W and YKL202W. YKL199C skipped ########################## YKL198C (1200bp = 400AA) has 22 hits (PTK1) probable serine/threonine-specific p..C 2.7.1.-) (106) Flanking ORFs are: YKL204W and YKL202W. YKL198C skipped ########################## YKL197C (3132bp = 1044AA) has 45 hits (PEX1) member of the AAA-protein family Spar (test2) non-orthologous hit at 87% f3132/3132 (100.0%) over 3132bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f3070/3121 (98.4%) over 3132bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f597/612 (97.5%) over 612bp for offset 1 <== THIS IS REAL YKL197C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL197C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1969 (0.4%). Conflicting: 9/1969 (0.5%). NoInfo: 6/1969 (0.3%). Certain keep: 1946/1969 (98.8%) ########################## YKL196C (603bp = 201AA) has 12 hits (YKT6) v-SNARE Spar (test2) orthologous hit at 92% f602/602 (100.0%) over 602bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL YKL196C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL196C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1970 (0.4%). Conflicting: 9/1970 (0.5%). NoInfo: 6/1970 (0.3%). Certain keep: 1947/1970 (98.8%) ########################## YKL194C (1389bp = 463AA) has 15 hits (MST1) mitochondrial threonine-tRNA synthetase Spar (test2) orthologous hit at 89% f1385/1388 (99.8%) over 1389bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1386/1388 (99.9%) over 1389bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1384/1388 (99.7%) over 1389bp for offset 0 <== THIS IS REAL YKL194C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL194C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1971 (0.4%). Conflicting: 9/1971 (0.5%). NoInfo: 6/1971 (0.3%). Certain keep: 1948/1971 (98.8%) ########################## YKL193C (1017bp = 339AA) has 19 hits (SDS22) Glc7p regulatory subunit Spar (test2) orthologous hit at 88% f1017/1017 (100.0%) over 1017bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1017/1017 (100.0%) over 1017bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1008/1015 (99.3%) over 1017bp for offset 0 <== THIS IS REAL YKL193C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL193C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1972 (0.4%). Conflicting: 9/1972 (0.5%). NoInfo: 6/1972 (0.3%). Certain keep: 1949/1972 (98.8%) ########################## YKL192C (378bp = 126AA) has 5 hits (ACP1) mitochondrial acyl carrier protein Spar (test2) orthologous hit at 93% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f378/378 (100.0%) over 378bp for offset 0 <== THIS IS REAL YKL192C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL192C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1973 (0.4%). Conflicting: 9/1973 (0.5%). NoInfo: 6/1973 (0.3%). Certain keep: 1950/1973 (98.8%) ########################## YKL191W (1605bp = 535AA) has 4 hits (DPH2) diphthamide synthesis protein Spar (test2) orthologous hit at 87% f1605/1605 (100.0%) over 1605bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1598/1603 (99.7%) over 1605bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1568/1597 (98.2%) over 1603bp for offset 0 <== THIS IS REAL YKL191W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL191W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1974 (0.4%). Conflicting: 9/1974 (0.5%). NoInfo: 6/1974 (0.3%). Certain keep: 1951/1974 (98.8%) ########################## YKL189W (1200bp = 400AA) has 37 hits (HYM1) The homologue in Aspergillus nidulan..3211-3218. (259) Spar (test2) orthologous hit at 91% f1196/1199 (99.7%) over 1200bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1195/1199 (99.7%) over 1200bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1126/1169 (96.3%) over 1173bp for offset 0 <== THIS IS REAL YKL189W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL189W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1975 (0.4%). Conflicting: 9/1975 (0.5%). NoInfo: 6/1975 (0.3%). Certain keep: 1952/1975 (98.8%) ########################## YKL188C (2562bp = 854AA) has 32 hits (PXA2) peroxisomal ABC transporter 2 Spar (test2) orthologous hit at 89% f2556/2561 (99.8%) over 2562bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2546/2555 (99.6%) over 2562bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2521/2553 (98.7%) over 2561bp for offset 0 <== THIS IS REAL YKL188C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL188C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1976 (0.4%). Conflicting: 9/1976 (0.5%). NoInfo: 6/1976 (0.3%). Certain keep: 1953/1976 (98.8%) ########################## YKL186C (555bp = 185AA) has 4 hits (MTR2) mRNA transport regulator Spar (test2) orthologous hit at 91% f554/554 (100.0%) over 554bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f555/555 (100.0%) over 555bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f377/406 (92.9%) over 408bp for offset 0 <== THIS IS REAL YKL186C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL186C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1977 (0.4%). Conflicting: 9/1977 (0.5%). NoInfo: 6/1977 (0.3%). Certain keep: 1954/1977 (98.8%) ########################## YKL185W (1767bp = 589AA) has 7 hits (ASH1) probable purine nucleotide-binding protein Spar (test2) orthologous hit at 89% f1752/1762 (99.4%) over 1767bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1031/1042 (98.9%) over 1044bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1205/1621 (74.3%) over 1663bp for offset 0 Sbay (test3) Longest island has f95 at 82% over 600bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|____|_____|____|____|____|____|____|____|___| 95f 82% 600bp 97f 86% 521bp Sb252full |==============================>.............................|=======================|=> YKL185W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL185W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1978 (0.4%). Conflicting: 9/1978 (0.5%). NoInfo: 6/1978 (0.3%). Certain keep: 1955/1978 (98.8%) ########################## YKL184W (1401bp = 467AA) has 7 hits (SPE1) Ornithine decarboxylase Spar (test2) orthologous hit at 87% f1401/1401 (100.0%) over 1401bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1392/1399 (99.5%) over 1401bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1374/1396 (98.4%) over 1399bp for offset 0 <== THIS IS REAL YKL184W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL184W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1979 (0.4%). Conflicting: 9/1979 (0.5%). NoInfo: 6/1979 (0.3%). Certain keep: 1956/1979 (98.8%) ########################## YKL183W (921bp = 307AA) has 4 hits (LOT5) Spar (test2) orthologous hit at 92% f912/918 (99.3%) over 918bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 87% f905/916 (98.8%) over 918bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f632/718 (88.0%) over 730bp for offset 0 Sbay (test3) Longest island has f97 at 83% over 504bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900921 |________|_________|_________|_________|________|_________|_________|_________|________|__| 97f 83% 504bp Sb252full |================================================>.....................> | YKL183W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL183W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1980 (0.4%). Conflicting: 9/1980 (0.5%). NoInfo: 6/1980 (0.3%). Certain keep: 1957/1980 (98.8%) ########################## YKL182W (6156bp = 2052AA) has 10 hits (FAS1) pentafunctional enzyme consisting o..ransferase (187) Spar (test2) orthologous hit at 93% f6156/6156 (100.0%) over 6156bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f3865/3903 (99.0%) over 3905bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f6126/6143 (99.7%) over 6150bp for offset 0 <== THIS IS REAL YKL182W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL182W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1981 (0.4%). Conflicting: 9/1981 (0.5%). NoInfo: 6/1981 (0.3%). Certain keep: 1958/1981 (98.8%) ########################## YKL181W (1284bp = 428AA) has 28 hits (PRS1) ribose-phosphate pyrophosphokinase Spar (test2) orthologous hit at 92% f1284/1284 (100.0%) over 1284bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 89% f1284/1284 (100.0%) over 1284bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1284/1284 (100.0%) over 1284bp for offset 0 <== THIS IS REAL YKL181W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL181W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1982 (0.4%). Conflicting: 9/1982 (0.5%). NoInfo: 6/1982 (0.3%). Certain keep: 1959/1982 (98.8%) ########################## YKL178C (1413bp = 471AA) has 8 hits (STE3) a factor recptor Flanking ORFs are: YKL182W and YKL180W. YKL178C skipped ########################## YKL176C (2487bp = 829AA) has 7 hits (LST4) involved in regulated secretion/recyc.. permeases (116) Spar (test2) orthologous hit at 89% f2484/2486 (99.9%) over 2487bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2472/2481 (99.6%) over 2486bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2462/2479 (99.3%) over 2486bp for offset 0 <== THIS IS REAL YKL176C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL176C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1983 (0.4%). Conflicting: 9/1983 (0.5%). NoInfo: 6/1983 (0.3%). Certain keep: 1960/1983 (98.8%) ########################## YKL175W (1512bp = 504AA) has 8 hits (ZRT3) Spar (test2) orthologous hit at 88% f1505/1510 (99.7%) over 1512bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1175/1259 (93.3%) over 1272bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1496/1510 (99.1%) over 1512bp for offset 0 <== THIS IS REAL YKL175W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL175W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1984 (0.4%). Conflicting: 9/1984 (0.5%). NoInfo: 6/1984 (0.3%). Certain keep: 1961/1984 (98.8%) ########################## YKL173W (3027bp = 1009AA) has 16 hits (SNU114) U5 snRNP-specific protein related to EF-2 Spar (test2) orthologous hit at 87% f3011/3022 (99.6%) over 3027bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f3003/3022 (99.4%) over 3025bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2823/2863 (98.6%) over 2869bp for offset 1 <== THIS IS REAL YKL173W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL173W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1985 (0.4%). Conflicting: 9/1985 (0.5%). NoInfo: 6/1985 (0.3%). Certain keep: 1962/1985 (98.8%) ########################## YKL172W (1284bp = 428AA) has 700 hits (EBP2) Nucleolar protein Spar (test2) orthologous hit at 85% f1185/1268 (93.5%) over 1284bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f929/962 (96.6%) over 968bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f980/1096 (89.4%) over 1101bp for offset 1 Sbay (test3) Longest island has f98 at 81% over 963bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|______|______|______|______|______|______|______|______|______|_____| 98f 81% 963bp Sb254full |..........|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YKL172W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL172W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1986 (0.4%). Conflicting: 9/1986 (0.5%). NoInfo: 6/1986 (0.3%). Certain keep: 1963/1986 (98.8%) ########################## YKL170W (417bp = 139AA) has 4 hits (MRPL38) mitochondrial ribosomal protein L14 Flanking ORFs are: YKL173W and YKL171W. YKL170W skipped ########################## YKL168C (2205bp = 735AA) has 50 hits (KKQ8) probable serine/threonine-specific p..C 2.7.1.-) (106) Spar (test2) orthologous hit at 87% f2175/2199 (98.9%) over 2205bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2144/2194 (97.7%) over 2205bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1147/1169 (98.1%) over 1174bp for offset 0 <== THIS IS REAL YKL168C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL168C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1987 (0.4%). Conflicting: 9/1987 (0.5%). NoInfo: 6/1987 (0.3%). Certain keep: 1964/1987 (98.8%) ########################## YKL167C (414bp = 138AA) has 6 hits (MRP49) 16 kDa mitochondrial ribosomal large ..it protein (95) Spar (test2) orthologous hit at 90% f414/414 (100.0%) over 414bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f399/412 (96.8%) over 413bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f399/412 (96.8%) over 413bp for offset 2 <== THIS IS REAL YKL167C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL167C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1988 (0.4%). Conflicting: 9/1988 (0.5%). NoInfo: 6/1988 (0.3%). Certain keep: 1965/1988 (98.8%) ########################## YKL166C (1197bp = 399AA) has 66 hits (TPK3) cAMP-dependent protein kinase cataly..ic subunit (91) Spar (test2) orthologous hit at 92% f1197/1197 (100.0%) over 1197bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1194/1194 (100.0%) over 1197bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1192/1195 (99.7%) over 1196bp for offset 0 <== THIS IS REAL YKL166C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL166C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1989 (0.4%). Conflicting: 9/1989 (0.5%). NoInfo: 6/1989 (0.3%). Certain keep: 1966/1989 (98.8%) ########################## YKL165C (2760bp = 920AA) has 21 hits (MCD4) (putative) involved in cell polarity Spar (test2) orthologous hit at 90% f2760/2760 (100.0%) over 2760bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f2760/2760 (100.0%) over 2760bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f2745/2756 (99.6%) over 2759bp for offset 0 <== THIS IS REAL YKL165C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL165C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1990 (0.4%). Conflicting: 9/1990 (0.5%). NoInfo: 6/1990 (0.3%). Certain keep: 1967/1990 (98.8%) ########################## YKL164C (1026bp = 342AA) has 189 hits (PIR1) Protein containing tandem internal repeats Spar (test2) orthologous hit at 85% f701/756 (92.7%) over 760bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f665/673 (98.8%) over 677bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f657/679 (96.8%) over 684bp for offset 0 <== THIS IS REAL YKL164C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL164C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1991 (0.4%). Conflicting: 9/1991 (0.5%). NoInfo: 6/1991 (0.3%). Certain keep: 1968/1991 (98.8%) ########################## YKL163W (978bp = 326AA) has 99 hits (PIR3) Protein containing tandem internal repeats Spar (test2) non-orthologous hit at 91% f714/714 (100.0%) over 714bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f719/719 (100.0%) over 719bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f707/712 (99.3%) over 714bp for offset 0 <== THIS IS REAL YKL163W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL163W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1992 (0.4%). Conflicting: 9/1992 (0.5%). NoInfo: 6/1992 (0.3%). Certain keep: 1969/1992 (98.8%) ########################## YKL159C (636bp = 212AA) has 6 hits (RCN1) calcineurin inhibitor Spar (test2) orthologous hit at 87% f636/636 (100.0%) over 636bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f631/635 (99.4%) over 636bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f632/632 (100.0%) over 632bp for offset 0 <== THIS IS REAL YKL159C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL159C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1993 (0.4%). Conflicting: 9/1993 (0.5%). NoInfo: 6/1993 (0.3%). Certain keep: 1970/1993 (98.8%) ########################## YKL155C (1887bp = 629AA) has 18 hits (RSM22) mitochondrial ribosome small subuni.. component (91) Spar (test2) orthologous hit at 87% f1885/1885 (100.0%) over 1885bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1368/1390 (98.4%) over 1393bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1818/1878 (96.8%) over 1885bp for offset 0 <== THIS IS REAL YKL155C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL155C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1994 (0.4%). Conflicting: 9/1994 (0.5%). NoInfo: 6/1994 (0.3%). Certain keep: 1971/1994 (98.8%) ########################## YKL154W (735bp = 245AA) has 10 hits (SRP102) Signal recognition particle recepto..ta subunit (94) Spar (test2) orthologous hit at 88% f735/735 (100.0%) over 735bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f733/735 (99.7%) over 735bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f731/734 (99.6%) over 734bp for offset 0 <== THIS IS REAL YKL154W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL154W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1995 (0.4%). Conflicting: 9/1995 (0.5%). NoInfo: 6/1995 (0.3%). Certain keep: 1972/1995 (98.8%) ########################## YKL152C (744bp = 248AA) has 12 hits (GPM1) Phosphoglycerate mutase Flanking ORFs are: YKL155C and YKL153W. YKL152C skipped ########################## YKL150W (909bp = 303AA) has 8 hits (MCR1) NADH-cytochrome b5 reductase Spar (test2) orthologous hit at 90% f909/909 (100.0%) over 909bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f909/909 (100.0%) over 909bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f906/908 (99.8%) over 909bp for offset 0 <== THIS IS REAL YKL150W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL150W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1996 (0.4%). Conflicting: 9/1996 (0.5%). NoInfo: 6/1996 (0.3%). Certain keep: 1973/1996 (98.8%) ########################## YKL149C (1218bp = 406AA) has 5 hits (DBR1) RNA lariat debranching enzyme Spar (test2) orthologous hit at 87% f1210/1217 (99.4%) over 1218bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1195/1209 (98.8%) over 1211bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1181/1204 (98.1%) over 1208bp for offset 0 <== THIS IS REAL YKL149C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL149C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1997 (0.4%). Conflicting: 9/1997 (0.5%). NoInfo: 6/1997 (0.3%). Certain keep: 1974/1997 (98.8%) ########################## YKL148C (1923bp = 641AA) has 11 hits (SDH1) flavoprotein subunit of succinate de..ydrogenase (91) Spar (test2) orthologous hit at 93% f1922/1922 (100.0%) over 1922bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1922/1922 (100.0%) over 1922bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1922/1922 (100.0%) over 1922bp for offset 0 <== THIS IS REAL YKL148C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL148C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1998 (0.4%). Conflicting: 9/1998 (0.5%). NoInfo: 6/1998 (0.3%). Certain keep: 1975/1998 (98.8%) ########################## YKL145W (1404bp = 468AA) has 69 hits (RPT1) putative ATPase, 26S protease subuni.. component (91) Spar (test2) orthologous hit at 92% f1404/1404 (100.0%) over 1404bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1400/1403 (99.8%) over 1404bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f341/341 (100.0%) over 341bp for offset 0 <== THIS IS REAL YKL145W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL145W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/1999 (0.4%). Conflicting: 9/1999 (0.5%). NoInfo: 6/1999 (0.3%). Certain keep: 1976/1999 (98.8%) ########################## YKL144C (639bp = 213AA) has 7 hits (RPC25) Subunit of RNA polymerase III Spar (test2) orthologous hit at 93% f639/639 (100.0%) over 639bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f639/639 (100.0%) over 639bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f233/233 (100.0%) over 233bp for offset 0 <== THIS IS REAL YKL144C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL144C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2000 (0.4%). Conflicting: 9/2000 (0.5%). NoInfo: 6/2000 (0.3%). Certain keep: 1977/2000 (98.8%) ########################## YKL143W (1392bp = 464AA) has 85 hits (LTV1) low temperature viability protein Spar (test2) orthologous hit at 89% f1392/1392 (100.0%) over 1392bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1379/1388 (99.4%) over 1391bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f498/498 (100.0%) over 498bp for offset 0 <== THIS IS REAL YKL143W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL143W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2001 (0.4%). Conflicting: 9/2001 (0.4%). NoInfo: 6/2001 (0.3%). Certain keep: 1978/2001 (98.9%) ########################## YKL142W (660bp = 220AA) has 6 hits (MRP8) mitochondrial ribosomal protein Spar (test2) orthologous hit at 90% f659/659 (100.0%) over 659bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL YKL142W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL142W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2002 (0.4%). Conflicting: 9/2002 (0.4%). NoInfo: 6/2002 (0.3%). Certain keep: 1979/2002 (98.9%) ########################## YKL141W (597bp = 199AA) has 7 hits (SDH3) succinate dehydrogenase cytochrome b Spar (test2) orthologous hit at 90% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f317/326 (97.2%) over 327bp for offset 0 <== THIS IS REAL YKL141W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL141W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2003 (0.4%). Conflicting: 9/2003 (0.4%). NoInfo: 6/2003 (0.3%). Certain keep: 1980/2003 (98.9%) ########################## YKL140W (1647bp = 549AA) has 11 hits (TGL1) triglyceride lipase-cholesterol esterase Spar (test2) orthologous hit at 90% f1647/1647 (100.0%) over 1647bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1643/1646 (99.8%) over 1647bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1632/1645 (99.2%) over 1647bp for offset 0 <== THIS IS REAL YKL140W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL140W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2004 (0.4%). Conflicting: 9/2004 (0.4%). NoInfo: 6/2004 (0.3%). Certain keep: 1981/2004 (98.9%) ########################## YKL139W (1587bp = 529AA) has 288 hits (CTK1) alpha subunit of the kinase which p..al domain) (159) Spar (test2) orthologous hit at 88% f1560/1577 (98.9%) over 1586bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1564/1577 (99.2%) over 1583bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1162/1185 (98.1%) over 1189bp for offset 1 <== THIS IS REAL YKL139W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL139W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2005 (0.4%). Conflicting: 9/2005 (0.4%). NoInfo: 6/2005 (0.3%). Certain keep: 1982/2005 (98.9%) ########################## YKL138C (396bp = 132AA) has 8 hits (MRPL31) 15.5 kDa mitochondrial ribosomal protein YmL31 Spar (test2) orthologous hit at 90% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL YKL138C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL138C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2006 (0.4%). Conflicting: 9/2006 (0.4%). NoInfo: 6/2006 (0.3%). Certain keep: 1983/2006 (98.9%) ########################## YKL135C (2181bp = 727AA) has 15 hits (APL2) Beta-adaptin, large subunit of the c..1) complex (121) Flanking ORFs are: YKL139W and YKL137W. YKL135C skipped ########################## YKL134C (2313bp = 771AA) has 18 hits (OCT1) mitochondrial intermediate peptidase..e activity (129) Spar (test2) orthologous hit at 90% f1749/1794 (97.5%) over 1795bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2260/2309 (97.9%) over 2313bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2254/2309 (97.6%) over 2313bp for offset 0 <== THIS IS REAL YKL134C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL134C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2007 (0.4%). Conflicting: 9/2007 (0.4%). NoInfo: 6/2007 (0.3%). Certain keep: 1984/2007 (98.9%) ########################## YKL132C (1293bp = 431AA) has 10 hits (RMA1) probable folyl-polyglutamate synthetase Flanking ORFs are: YKL135C and YKL133C. YKL132C skipped ########################## YKL130C (741bp = 247AA) has 7 hits (SHE2) involved in cell polarity Spar (test2) orthologous hit at 88% f741/741 (100.0%) over 741bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f741/741 (100.0%) over 741bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f741/741 (100.0%) over 741bp for offset 0 <== THIS IS REAL YKL130C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL130C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2008 (0.4%). Conflicting: 9/2008 (0.4%). NoInfo: 6/2008 (0.3%). Certain keep: 1985/2008 (98.9%) ########################## YKL129C (3816bp = 1272AA) has 38 hits (MYO3) myosin I Spar (test2) orthologous hit at 90% f3293/3329 (98.9%) over 3330bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3293/3356 (98.1%) over 3368bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3492/3780 (92.4%) over 3808bp for offset 0 <== THIS IS REAL YKL129C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL129C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2009 (0.4%). Conflicting: 9/2009 (0.4%). NoInfo: 6/2009 (0.3%). Certain keep: 1986/2009 (98.9%) ########################## YKL128C (888bp = 296AA) has 3 hits (PMU1) Phospo-mutase homolog Spar (test2) orthologous hit at 87% f888/888 (100.0%) over 888bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f882/887 (99.4%) over 888bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f860/862 (99.8%) over 863bp for offset 0 <== THIS IS REAL YKL128C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL128C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2010 (0.4%). Conflicting: 9/2010 (0.4%). NoInfo: 6/2010 (0.3%). Certain keep: 1987/2010 (98.9%) ########################## YKL127W (1713bp = 571AA) has 9 hits (PGM1) phosphoglucomutase, minor isoform Spar (test2) orthologous hit at 89% f1709/1712 (99.8%) over 1713bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1695/1711 (99.1%) over 1713bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1688/1709 (98.8%) over 1713bp for offset 0 <== THIS IS REAL YKL127W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL127W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2011 (0.4%). Conflicting: 9/2011 (0.4%). NoInfo: 6/2011 (0.3%). Certain keep: 1988/2011 (98.9%) ########################## YKL126W (2043bp = 681AA) has 90 hits (YPK1) 76.5 kDa Serine/threonine protein ki..l to Ypk2p (147) Spar (test2) orthologous hit at 93% f2043/2043 (100.0%) over 2043bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2043/2043 (100.0%) over 2043bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2024/2043 (99.1%) over 2043bp for offset 1 <== THIS IS REAL YKL126W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL126W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2012 (0.4%). Conflicting: 9/2012 (0.4%). NoInfo: 6/2012 (0.3%). Certain keep: 1989/2012 (98.9%) ########################## YKL125W (1884bp = 628AA) has 160 hits (RRN3) DNA-independent RNA Polymerase I tr..ion factor (98) Spar (test2) orthologous hit at 92% f1880/1884 (99.8%) over 1884bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1878/1884 (99.7%) over 1884bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1138/1159 (98.2%) over 1162bp for offset 1 <== THIS IS REAL YKL125W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL125W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2013 (0.4%). Conflicting: 9/2013 (0.4%). NoInfo: 6/2013 (0.3%). Certain keep: 1990/2013 (98.9%) ########################## YKL124W (1740bp = 580AA) has 18 hits (SSH4) (putative) involved in ER functions Flanking ORFs are: YKL126W and YKL124W. YKL124W skipped ########################## YKL122C (504bp = 168AA) has 56 hits (SRP21) component of signal recognition particle Spar (test2) orthologous hit at 88% f503/504 (99.8%) over 504bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f503/504 (99.8%) over 504bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f219/219 (100.0%) over 219bp for offset 0 <== THIS IS REAL YKL122C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL122C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2014 (0.4%). Conflicting: 9/2014 (0.4%). NoInfo: 6/2014 (0.3%). Certain keep: 1991/2014 (98.9%) ########################## YKL120W (975bp = 325AA) has 11 hits (OAC1) mitochondrial oxaloacetate transport protein Spar (test2) orthologous hit at 94% f975/975 (100.0%) over 975bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f975/975 (100.0%) over 975bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f970/974 (99.6%) over 975bp for offset 0 <== THIS IS REAL YKL120W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL120W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2015 (0.4%). Conflicting: 9/2015 (0.4%). NoInfo: 6/2015 (0.3%). Certain keep: 1992/2015 (98.9%) ########################## YKL119C (648bp = 216AA) has 11 hits (VPH2) 25.2 kDa protein involved in assembly..(+) ATPase (104) Flanking ORFs are: YKL121W and YKL119C. YKL119C skipped ########################## YKL117W (651bp = 217AA) has 42 hits (SBA1) Hsp90 (Ninety) Associated Co-chaperone Spar (test2) orthologous hit at 90% f556/571 (97.4%) over 573bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f546/546 (100.0%) over 546bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f553/571 (96.8%) over 573bp for offset 0 <== THIS IS REAL YKL117W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL117W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2016 (0.4%). Conflicting: 9/2016 (0.4%). NoInfo: 6/2016 (0.3%). Certain keep: 1993/2016 (98.9%) ########################## YKL116C (1557bp = 519AA) has 18 hits (PRR1) Flanking ORFs are: YKL118W and YKL116C. YKL116C skipped ########################## YKL114C (1104bp = 368AA) has 13 hits (APN1) major apurinic/apyrimidinic endonucl..diesterase (105) Spar (test2) orthologous hit at 90% f1104/1104 (100.0%) over 1104bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1104/1104 (100.0%) over 1104bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1087/1102 (98.6%) over 1104bp for offset 0 <== THIS IS REAL YKL114C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL114C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2017 (0.4%). Conflicting: 9/2017 (0.4%). NoInfo: 6/2017 (0.3%). Certain keep: 1994/2017 (98.9%) ########################## YKL113C (1149bp = 383AA) has 10 hits (RAD27) 42 kDa 5' to 3' exonuclease require..processing (113) Spar (test2) orthologous hit at 92% f1149/1149 (100.0%) over 1149bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1142/1148 (99.5%) over 1149bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1143/1146 (99.7%) over 1147bp for offset 0 <== THIS IS REAL YKL113C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL113C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2018 (0.4%). Conflicting: 9/2018 (0.4%). NoInfo: 6/2018 (0.3%). Certain keep: 1995/2018 (98.9%) ########################## YKL112W (2196bp = 732AA) has 144 hits (ABF1) transcriptional activator and ARS1 ..ng protein (95) Flanking ORFs are: YKL114C and YKL112W. YKL112W skipped ########################## YKL110C (942bp = 314AA) has 6 hits (KTI12) Protein involved in resistance to K. ..ller toxin (99) Spar (test2) orthologous hit at 91% f942/942 (100.0%) over 942bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f942/942 (100.0%) over 942bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f942/942 (100.0%) over 942bp for offset 0 <== THIS IS REAL YKL110C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL110C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2019 (0.4%). Conflicting: 9/2019 (0.4%). NoInfo: 6/2019 (0.3%). Certain keep: 1996/2019 (98.9%) ########################## YKL109W (1665bp = 555AA) has 95 hits (HAP4) transcriptional activator protein of..heteromer) (120) Spar (test2) orthologous hit at 82% f1226/1316 (93.2%) over 1332bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f1083/1216 (89.1%) over 1237bp for offset 0 Smik (test3) Longest island has f95 at 79% over 1059bp <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1395/1569 (88.9%) over 1592bp for offset 0 Sbay (test3) Longest island has f96 at 77% over 1194bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k |____|____|_____|____|_____|____|____|_____|____|_____|____|____|_____|____|_____|____|___| 95f 79% 1059bp Sm702full |.......|========================================================>> | 96f 77% 1194bp Sb259full |..............|================================================================>.....> | YKL109W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL109W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2020 (0.4%). Conflicting: 9/2020 (0.4%). NoInfo: 6/2020 (0.3%). Certain keep: 1997/2020 (98.9%) ########################## YKL108W (1362bp = 454AA) has 101 hits (SLD2) Synthetically lethal with dpb11-1; ..eplication (108) Spar (test2) orthologous hit at 77% f980/1106 (88.6%) over 1124bp for offset 1 Spar (test3) Longest island has f98 at 82% over 935bp <== THIS IS REAL Smik (test2) orthologous hit at 75% f1293/1352 (95.6%) over 1362bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 67% f763/1008 (75.7%) over 1037bp for offset 0 Sbay (test3) Longest island has f94 at 73% over 534bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|______|_____|______|_____|______|______|_____|______|_____|____| 98f 82% 935bp Sp321full |============================================================>............> | 94f 73% 534bp Sb259full |==================================>................................> | YKL108W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL108W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2021 (0.4%). Conflicting: 9/2021 (0.4%). NoInfo: 6/2021 (0.3%). Certain keep: 1998/2021 (98.9%) ########################## YKL106W (1356bp = 452AA) has 13 hits (AAT1) aspartate aminotransferase, mitochondrial Spar (test2) orthologous hit at 91% f1355/1355 (100.0%) over 1355bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1355/1355 (100.0%) over 1355bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1348/1354 (99.6%) over 1355bp for offset 0 <== THIS IS REAL YKL106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2022 (0.4%). Conflicting: 9/2022 (0.4%). NoInfo: 6/2022 (0.3%). Certain keep: 1999/2022 (98.9%) ########################## YKL104C (2154bp = 718AA) has 16 hits (GFA1) Glutamine_fructose-6-phosphate amido.. synthase) (127) Spar (test2) orthologous hit at 93% f2154/2154 (100.0%) over 2154bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2153/2153 (100.0%) over 2153bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2149/2153 (99.8%) over 2154bp for offset 0 <== THIS IS REAL YKL104C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL104C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2023 (0.4%). Conflicting: 9/2023 (0.4%). NoInfo: 6/2023 (0.3%). Certain keep: 2000/2023 (98.9%) ########################## YKL103C (1545bp = 515AA) has 8 hits (LAP4) vacuolar aminopeptidase ysc1 Spar (test2) orthologous hit at 90% f1545/1545 (100.0%) over 1545bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1458/1458 (100.0%) over 1458bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1480/1534 (96.5%) over 1545bp for offset 0 <== THIS IS REAL YKL103C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL103C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2024 (0.4%). Conflicting: 9/2024 (0.4%). NoInfo: 6/2024 (0.3%). Certain keep: 2001/2024 (98.9%) ########################## YKL101W (4557bp = 1519AA) has 74 hits (HSL1) Putative protein kinase homologous .. cdr1/nim1 (101) Spar (test2) orthologous hit at 86% f2544/2577 (98.7%) over 2583bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2502/2524 (99.1%) over 2532bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2415/2550 (94.7%) over 2571bp for offset 0 <== THIS IS REAL YKL101W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL101W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2025 (0.4%). Conflicting: 9/2025 (0.4%). NoInfo: 6/2025 (0.3%). Certain keep: 2002/2025 (98.9%) ########################## YKL099C (771bp = 257AA) has 16 hits (UTP11) Protein required for cell viability Spar (test2) orthologous hit at 91% f704/770 (91.4%) over 770bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f711/769 (92.5%) over 770bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f707/767 (92.2%) over 767bp for offset 1 <== THIS IS REAL YKL099C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL099C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2026 (0.4%). Conflicting: 9/2026 (0.4%). NoInfo: 6/2026 (0.3%). Certain keep: 2003/2026 (98.9%) ########################## YKL096W-A (279bp = 93AA) has 119 hits (CWP2) cell wall mannoprotein Spar (test2) orthologous hit at 93% f279/279 (100.0%) over 279bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f276/276 (100.0%) over 279bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f241/265 (90.9%) over 269bp for offset 0 <== THIS IS REAL YKL096W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL096W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2027 (0.4%). Conflicting: 9/2027 (0.4%). NoInfo: 6/2027 (0.3%). Certain keep: 2004/2027 (98.9%) ########################## YKL096W (720bp = 240AA) has 33 hits (CWP1) cell wall mannoprotein Spar (test2) orthologous hit at 82% f572/575 (99.5%) over 582bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f715/717 (99.7%) over 720bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f487/500 (97.4%) over 506bp for offset 0 <== THIS IS REAL YKL096W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL096W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2028 (0.4%). Conflicting: 9/2028 (0.4%). NoInfo: 6/2028 (0.3%). Certain keep: 2005/2028 (98.9%) ########################## YKL095W (837bp = 279AA) has 32 hits (YJU2) Product of gene unknown Spar (test2) orthologous hit at 88% f837/837 (100.0%) over 837bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f834/836 (99.8%) over 837bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f818/834 (98.1%) over 837bp for offset 0 <== THIS IS REAL YKL095W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL095W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2029 (0.4%). Conflicting: 9/2029 (0.4%). NoInfo: 6/2029 (0.3%). Certain keep: 2006/2029 (98.9%) ########################## YKL094W (942bp = 314AA) has 4 hits (YJU3) Product of gene unknown Spar (test2) orthologous hit at 89% f941/941 (100.0%) over 941bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f942/942 (100.0%) over 942bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f935/941 (99.4%) over 942bp for offset 0 <== THIS IS REAL YKL094W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL094W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2030 (0.4%). Conflicting: 9/2030 (0.4%). NoInfo: 6/2030 (0.3%). Certain keep: 2007/2030 (98.9%) ########################## YKL093W (1020bp = 340AA) has 5 hits (MBR1) MBR1 protein precursor Spar (test2) orthologous hit at 87% f1013/1019 (99.4%) over 1020bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1010/1017 (99.3%) over 1019bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f965/973 (99.2%) over 974bp for offset 0 <== THIS IS REAL YKL093W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL093W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2031 (0.4%). Conflicting: 9/2031 (0.4%). NoInfo: 6/2031 (0.3%). Certain keep: 2008/2031 (98.9%) ########################## YKL092C (3315bp = 1105AA) has 45 hits (BUD2) GTPase-activating protein (GAP) for..sr1p/Bud1p (92) Spar (test2) orthologous hit at 88% f2477/3314 (74.7%) over 3315bp for offset 0 Spar (test3) Longest island has f100 at 88% over 2477bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f3286/3311 (99.2%) over 3314bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2485/2595 (95.8%) over 2616bp for offset 0 <== THIS IS REAL 0 10020030400500600708009001k1k 1k 1k 1k1k 1k 1k1k 1k 2k 2k2k 2k 2k2k 2k 2k 2k2k 3k 3k3k 33k |_|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|_|__|| 100f 88% 2477bp 100f 87% 839bp Sp321full |==================================================================|oooooooooooooooooooooo| YKL092C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL092C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2032 (0.4%). Conflicting: 9/2032 (0.4%). NoInfo: 6/2032 (0.3%). Certain keep: 2009/2032 (98.9%) ########################## YKL089W (1650bp = 550AA) has 38 hits (MIF2) centromere protein Spar (test2) orthologous hit at 89% f1650/1650 (100.0%) over 1650bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1640/1648 (99.5%) over 1650bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1629/1644 (99.1%) over 1650bp for offset 0 <== THIS IS REAL YKL089W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL089W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2033 (0.4%). Conflicting: 9/2033 (0.4%). NoInfo: 6/2033 (0.3%). Certain keep: 2010/2033 (98.9%) ########################## YKL087C (675bp = 225AA) has 5 hits (CYT2) cytochrome c1 heme lyase Spar (test2) orthologous hit at 90% f663/673 (98.5%) over 675bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f672/674 (99.7%) over 675bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f580/589 (98.5%) over 594bp for offset 0 <== THIS IS REAL YKL087C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL087C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2034 (0.4%). Conflicting: 9/2034 (0.4%). NoInfo: 6/2034 (0.3%). Certain keep: 2011/2034 (98.9%) ########################## YKL085W (1005bp = 335AA) has 17 hits (MDH1) mitochondrial malate dehydrogenase Spar (test2) orthologous hit at 91% f1005/1005 (100.0%) over 1005bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1005/1005 (100.0%) over 1005bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f999/1004 (99.5%) over 1005bp for offset 0 <== THIS IS REAL YKL085W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL085W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2035 (0.4%). Conflicting: 9/2035 (0.4%). NoInfo: 6/2035 (0.3%). Certain keep: 2012/2035 (98.9%) ########################## YKL080W (1179bp = 393AA) has 5 hits (VMA5) vacuolar ATPase V1 domain subunit C (42 kDa) Spar (test2) orthologous hit at 94% f1179/1179 (100.0%) over 1179bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1172/1178 (99.5%) over 1179bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 88% f1175/1178 (99.7%) over 1179bp for offset 0 <== THIS IS REAL YKL080W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL080W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2036 (0.4%). Conflicting: 9/2036 (0.4%). NoInfo: 6/2036 (0.3%). Certain keep: 2013/2036 (98.9%) ########################## YKL079W (1971bp = 657AA) has 20 hits (SMY1) kinesin heavy chain homolog Spar (test2) orthologous hit at 89% f1971/1971 (100.0%) over 1971bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1926/1962 (98.2%) over 1971bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1123/1142 (98.3%) over 1146bp for offset 0 <== THIS IS REAL YKL079W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL079W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2037 (0.4%). Conflicting: 9/2037 (0.4%). NoInfo: 6/2037 (0.3%). Certain keep: 2014/2037 (98.9%) ########################## YKL078W (2208bp = 736AA) has 43 hits (DHR2) Protein required for cell viability Spar (test2) orthologous hit at 89% f2197/2203 (99.7%) over 2207bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2194/2206 (99.5%) over 2208bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f101/101 (100.0%) over 101bp for offset 0 Sbay (test3) Longest island has f100 at 85% over 101bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 22k |___|___|___|___|___|___|___|___|___|___|___|___|___|____|___|___|___|___|___|___|___|___|| 100f Sb264brkp |====| YKL078W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YKL078W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2038 (0.4%). Conflicting: 9/2038 (0.4%). NoInfo: 6/2038 (0.3%). Certain keep: 2015/2038 (98.9%) ########################## YKL074C (1584bp = 528AA) has 7 hits (MUD2) involved in early pre-mRNA splicing Spar (test2) orthologous hit at 86% f1584/1584 (100.0%) over 1584bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1568/1582 (99.1%) over 1584bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1563/1579 (99.0%) over 1584bp for offset 0 <== THIS IS REAL YKL074C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL074C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2039 (0.4%). Conflicting: 9/2039 (0.4%). NoInfo: 6/2039 (0.3%). Certain keep: 2016/2039 (98.9%) ########################## YKL073W (2646bp = 882AA) has 25 hits (LHS1) novel member of the Hsp70 family of ..reticulum: (158) Spar (test2) orthologous hit at 89% f1547/1547 (100.0%) over 1547bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2536/2568 (98.8%) over 2573bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2611/2639 (98.9%) over 2646bp for offset 0 <== THIS IS REAL YKL073W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL073W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2040 (0.4%). Conflicting: 9/2040 (0.4%). NoInfo: 6/2040 (0.3%). Certain keep: 2017/2040 (98.9%) ########################## YKL072W (2301bp = 767AA) has 19 hits (STB6) involved in transcription Spar (test2) orthologous hit at 90% f2294/2300 (99.7%) over 2301bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2266/2293 (98.8%) over 2298bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1664/1676 (99.3%) over 1678bp for offset 0 <== THIS IS REAL YKL072W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL072W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2041 (0.4%). Conflicting: 9/2041 (0.4%). NoInfo: 6/2041 (0.3%). Certain keep: 2018/2041 (98.9%) ########################## YKL068W (2880bp = 960AA) has 47 hits (NUP100) Nuclear pore complex protein homol..to Nup116p (96) Spar (test2) orthologous hit at 84% f1789/1797 (99.6%) over 1798bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1884/1905 (98.9%) over 1912bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1646/1735 (94.9%) over 1748bp for offset 0 <== THIS IS REAL YKL068W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL068W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2042 (0.4%). Conflicting: 9/2042 (0.4%). NoInfo: 6/2042 (0.3%). Certain keep: 2019/2042 (98.9%) ########################## YKL067W (462bp = 154AA) has 4 hits (YNK1) Nucleoside diphosphate kinase Spar (test2) orthologous hit at 90% f462/462 (100.0%) over 462bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f462/462 (100.0%) over 462bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f462/462 (100.0%) over 462bp for offset 0 <== THIS IS REAL YKL067W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL067W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2043 (0.4%). Conflicting: 9/2043 (0.4%). NoInfo: 6/2043 (0.3%). Certain keep: 2020/2043 (98.9%) ########################## YKL065C (621bp = 207AA) has 8 hits (YET1) Yeast endoplasmic reticulum 25 kDa tra..ne protein (98) Spar (test2) orthologous hit at 92% f618/620 (99.7%) over 621bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f612/620 (98.7%) over 621bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f618/621 (99.5%) over 621bp for offset 0 <== THIS IS REAL YKL065C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL065C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2044 (0.4%). Conflicting: 9/2044 (0.4%). NoInfo: 6/2044 (0.3%). Certain keep: 2021/2044 (98.9%) ########################## YKL064W (2910bp = 970AA) has 43 hits (MNR2) Product of gene unknown Spar (test2) orthologous hit at 92% f2910/2910 (100.0%) over 2910bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2329/2341 (99.5%) over 2347bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f488/500 (97.6%) over 501bp for offset 0 <== THIS IS REAL YKL064W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL064W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2045 (0.4%). Conflicting: 9/2045 (0.4%). NoInfo: 6/2045 (0.3%). Certain keep: 2022/2045 (98.9%) ########################## YKL062W (1893bp = 631AA) has 24 hits (MSN4) zinc finger protein Spar (test2) orthologous hit at 90% f1891/1893 (99.9%) over 1893bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1513/1541 (98.2%) over 1549bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1824/1860 (98.1%) over 1870bp for offset 2 <== THIS IS REAL YKL062W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL062W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2046 (0.4%). Conflicting: 9/2046 (0.4%). NoInfo: 6/2046 (0.3%). Certain keep: 2023/2046 (98.9%) ########################## YKL060C (1080bp = 360AA) has 4 hits (FBA1) aldolase Spar (test2) orthologous hit at 97% f1077/1079 (99.8%) over 1080bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f1080/1080 (100.0%) over 1080bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f1077/1079 (99.8%) over 1080bp for offset 0 <== THIS IS REAL YKL060C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL060C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2047 (0.4%). Conflicting: 9/2047 (0.4%). NoInfo: 6/2047 (0.3%). Certain keep: 2024/2047 (98.9%) ########################## YKL059C (1326bp = 442AA) has 5 hits (MPE1) Protein required for cell viability Spar (test2) orthologous hit at 90% f1326/1326 (100.0%) over 1326bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1319/1325 (99.5%) over 1326bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1219/1275 (95.6%) over 1285bp for offset 0 <== THIS IS REAL YKL059C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL059C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2048 (0.4%). Conflicting: 9/2048 (0.4%). NoInfo: 6/2048 (0.3%). Certain keep: 2025/2048 (98.9%) ########################## YKL058W (369bp = 123AA) has 4 hits (TOA2) Transcription factor IIA, small chain Spar (test2) orthologous hit at 94% f368/368 (100.0%) over 368bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f368/368 (100.0%) over 368bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f368/368 (100.0%) over 368bp for offset 0 <== THIS IS REAL YKL058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2049 (0.4%). Conflicting: 9/2049 (0.4%). NoInfo: 6/2049 (0.3%). Certain keep: 2026/2049 (98.9%) ########################## YKL057C (3114bp = 1038AA) has 33 hits (NUP120) 100-kDa protein (predicted molecu..to Nup133p (183) Spar (test2) orthologous hit at 90% f2256/2498 (90.3%) over 2498bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2321/2321 (100.0%) over 2321bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f3083/3109 (99.2%) over 3114bp for offset 0 <== THIS IS REAL YKL057C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL057C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2050 (0.4%). Conflicting: 9/2050 (0.4%). NoInfo: 6/2050 (0.3%). Certain keep: 2027/2050 (98.9%) ########################## YKL055C (837bp = 279AA) has 2 hits (OAR1) 3-oxoacyl-[acyl-carrier-protein] reductase Spar (test2) orthologous hit at 85% f837/837 (100.0%) over 837bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f822/835 (98.4%) over 837bp for offset 0 <== THIS IS REAL YKL055C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YKL055C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2051 (0.4%). Conflicting: 9/2051 (0.4%). NoInfo: 6/2051 (0.3%). Certain keep: 2028/2051 (98.9%) ########################## YKL054C (2217bp = 739AA) has 1842 hits (VID31) vacuole import and degradation Spar (test2) orthologous hit at 75% f1720/2040 (84.3%) over 2100bp for offset 0 Spar (test3) Longest island has f96 at 87% over 1339bp <== THIS IS REAL Smik (test2) orthologous hit at 53% f502/916 (54.8%) over 959bp for offset 1 Smik (test3) Longest island has f82 at 48% over 118bp Smik (test2) orthologous hit at 55% f196/395 (49.6%) over 416bp for offset 0 Smik (test3) Longest island has f84 at 61% over 121bp Smik (test2) orthologous hit at 63% f174/284 (61.3%) over 299bp for offset 2 Smik (test3) Longest island has f83 at 71% over 107bp Smik (test2) orthologous hit at 64% f175/258 (67.8%) over 272bp for offset 0 Smik (test3) Longest island has f82 at 69% over 179bp Smik (test2) orthologous hit at 58% f187/258 (72.5%) over 265bp for offset 1 Smik (test3) Longest island has f92 at 60% over 181bp Smik (test2) orthologous hit at 67% f190/217 (87.6%) over 220bp for offset 0 Smik (test3) Longest island has f91 at 70% over 172bp Smik (test2) orthologous hit at 59% f172/227 (75.8%) over 236bp for offset 0 Smik (test3) Longest island has f91 at 63% over 116bp Smik (test2) orthologous hit at 97% f76/76 (100.0%) over 76bp for offset 0 Smik (test3) Longest island has f100 at 97% over 76bp Sbay (test2) orthologous hit at 72% f1030/1175 (87.7%) over 1198bp for offset 0 Sbay (test3) Longest island has f96 at 86% over 670bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 22k |___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|____|___|___|___|___|___|| 96f 87% 1339bp Sp324full |=====================================================>..............................> | 90f 67% 103bp86f82f 48% 92f 47%84f 64% 1Sm109full |..|ooo>........|==|oooo>..|o>....|ooo>> | 100f8869f784f 61% 121bp Sm109full ||>..|=|>.||xxxx> | 78f 83f 7186f 67% 21bpp Sm109full |==>|====>|>> | 82f 69% 178f 67% 18bp Sm109full ||oooooo>.|> | 92f 60%67f100f 67% 12bp Sm109full ||======|o>|> | 91f 70% 82f 59% 34bp Sm109full |======>|> | 864f6491f 63% 116bp Sm109full ||=>|>|===> | 100f 97% 76bp Sm109brk |==> | 96f 86% 670bp 87f 65% 283bp Sb268brk |==========================>..........|==========> | YKL054C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YKL054C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2052 (0.4%). Conflicting: 9/2052 (0.4%). NoInfo: 6/2052 (0.3%). Certain keep: 2029/2052 (98.9%) ########################## YKL052C (879bp = 293AA) has 6 hits (ASK1) Associated with Spindles and Kinetochores Flanking ORFs are: YKL055C and YKL053C-A. YKL052C skipped ########################## YKL049C (414bp = 138AA) has 5 hits (CSE4) high similarity to histone H3 and to h..ein CENP-A (110) Spar (test2) orthologous hit at 88% f414/414 (100.0%) over 414bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f412/412 (100.0%) over 412bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f413/413 (100.0%) over 413bp for offset 0 <== THIS IS REAL YKL049C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL049C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2053 (0.4%). Conflicting: 9/2053 (0.4%). NoInfo: 6/2053 (0.3%). Certain keep: 2030/2053 (98.9%) ########################## YKL048C (1923bp = 641AA) has 31 hits (ELM1) protein kinase Spar (test2) orthologous hit at 87% f1916/1922 (99.7%) over 1923bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1888/1917 (98.5%) over 1923bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1281/1363 (94.0%) over 1373bp for offset 0 <== THIS IS REAL YKL048C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL048C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2054 (0.4%). Conflicting: 9/2054 (0.4%). NoInfo: 6/2054 (0.3%). Certain keep: 2031/2054 (98.9%) ########################## YKL045W (1587bp = 529AA) has 6 hits (PRI2) p58 polypeptide of DNA primase Spar (test2) orthologous hit at 92% f1583/1586 (99.8%) over 1587bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1568/1583 (99.1%) over 1586bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1429/1586 (90.1%) over 1587bp for offset 0 <== THIS IS REAL YKL045W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL045W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2055 (0.4%). Conflicting: 9/2055 (0.4%). NoInfo: 6/2055 (0.3%). Certain keep: 2032/2055 (98.9%) ########################## YKL043W (1101bp = 367AA) has 18 hits (PHD1) putative transcription factor Spar (test2) orthologous hit at 90% f1101/1101 (100.0%) over 1101bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1070/1091 (98.1%) over 1101bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f521/570 (91.4%) over 581bp for offset 0 <== THIS IS REAL YKL043W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL043W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2056 (0.4%). Conflicting: 9/2056 (0.4%). NoInfo: 6/2056 (0.3%). Certain keep: 2033/2056 (98.9%) ########################## YKL042W (1092bp = 364AA) has 9 hits (SPC42) component of the spindle pole body Spar (test2) orthologous hit at 90% f1092/1092 (100.0%) over 1092bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1088/1091 (99.7%) over 1092bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f919/1069 (86.0%) over 1092bp for offset 0 Sbay (test3) Longest island has f95 at 79% over 653bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|_______|________|_______|_______|_______|________|_______|_______| 95f 79% 653bp Sb269full |====================================================>....................................| YKL042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2057 (0.4%). Conflicting: 9/2057 (0.4%). NoInfo: 6/2057 (0.3%). Certain keep: 2034/2057 (98.9%) ########################## YKL041W (675bp = 225AA) has 40 hits (VPS24) involved in secretion Spar (test2) orthologous hit at 92% f675/675 (100.0%) over 675bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f675/675 (100.0%) over 675bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f674/674 (100.0%) over 674bp for offset 0 <== THIS IS REAL YKL041W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL041W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2058 (0.4%). Conflicting: 9/2058 (0.4%). NoInfo: 6/2058 (0.3%). Certain keep: 2035/2058 (98.9%) ########################## YKL040C (771bp = 257AA) has 20 hits (NFU1) Nifu-like protein Spar (test2) orthologous hit at 91% f771/771 (100.0%) over 771bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f743/761 (97.6%) over 764bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f754/754 (100.0%) over 754bp for offset 0 <== THIS IS REAL YKL040C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL040C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2059 (0.4%). Conflicting: 9/2059 (0.4%). NoInfo: 6/2059 (0.3%). Certain keep: 2036/2059 (98.9%) ########################## YKL039W (1596bp = 532AA) has 10 hits (PTM1) Putative membrane protein Spar (test2) orthologous hit at 91% f1535/1595 (96.2%) over 1595bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1534/1591 (96.4%) over 1594bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1542/1586 (97.2%) over 1591bp for offset 0 <== THIS IS REAL YKL039W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL039W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2060 (0.4%). Conflicting: 9/2060 (0.4%). NoInfo: 6/2060 (0.3%). Certain keep: 2037/2060 (98.9%) ########################## YKL038W (3513bp = 1171AA) has 18 hits (RGT1) transcriptional repressor and activator Spar (test2) orthologous hit at 84% f2116/2224 (95.1%) over 2236bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3494/3506 (99.7%) over 3513bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1827/1969 (92.8%) over 1994bp for offset 0 <== THIS IS REAL YKL038W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL038W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2061 (0.4%). Conflicting: 9/2061 (0.4%). NoInfo: 6/2061 (0.3%). Certain keep: 2038/2061 (98.9%) ########################## YKL035W (1500bp = 500AA) has 12 hits (UGP1) Uridinephosphoglucose pyrophosphorylase Flanking ORFs are: YKL039W and YKL037W. YKL035W skipped ########################## YKL034W (2277bp = 759AA) has 9 hits (TUL1) Spar (test2) orthologous hit at 90% f2277/2277 (100.0%) over 2277bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2276/2277 (100.0%) over 2277bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2261/2273 (99.5%) over 2277bp for offset 0 <== THIS IS REAL YKL034W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL034W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2062 (0.4%). Conflicting: 9/2062 (0.4%). NoInfo: 6/2062 (0.3%). Certain keep: 2039/2062 (98.9%) ########################## YKL032C (1794bp = 598AA) has 2278 hits (IXR1) intrastrand crosslink recognition protein Spar (test2) orthologous hit at 54% f235/425 (55.3%) over 436bp for offset 0 Spar (test3) Longest island has f86 at 58% over 168bp Spar (test2) orthologous hit at 62% f244/348 (70.1%) over 362bp for offset 0 Spar (test3) Longest island has f91 at 80% over 137bp Spar (test2) orthologous hit at 56% f213/368 (57.9%) over 382bp for offset 0 Spar (test3) Longest island has f100 at 55% over 55bp Spar (test2) orthologous hit at 54% f132/371 (35.6%) over 383bp for offset 0 Spar (test3) Longest island has f95 at 61% over 66bp Spar (test2) orthologous hit at 61% f224/329 (68.1%) over 345bp for offset 2 Spar (test3) Longest island has f94 at 59% over 172bp Spar (test2) orthologous hit at 89% f220/235 (93.6%) over 237bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f887/893 (99.3%) over 893bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f827/904 (91.5%) over 915bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____|____| 86f 58% 168bp 84f188f 60% 57bp Sp324full ||========>.....|=>||oo> | 81f 51%91f 80%100f 50% 28bp Sp411brk |..|=====>|======|> | 100f 55%7473f 5100f Sp324full |.|==>....|o|=>..|==> | 90f 88f 495f 61% 684f 59% 32bp Sp324full ||x>.|o>..|===>....|> | 94f 59% 111006667f 63% 27bp Sp324full ||xxxxxxxx||>.|x|=> | YKL032C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL032C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2063 (0.4%). Conflicting: 9/2063 (0.4%). NoInfo: 6/2063 (0.3%). Certain keep: 2040/2063 (98.9%) ########################## YKL029C (2010bp = 670AA) has 4 hits (MAE1) mitochondrial malic enzyme Flanking ORFs are: YKL033W and YKL031W. YKL029C skipped ########################## YKL028W (1449bp = 483AA) has 876 hits (TFA1) Large subunit of transcription factor tfIIE Spar (test2) orthologous hit at 86% f1351/1420 (95.1%) over 1434bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1372/1428 (96.1%) over 1439bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1391/1430 (97.3%) over 1447bp for offset 0 <== THIS IS REAL YKL028W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL028W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2064 (0.4%). Conflicting: 9/2064 (0.4%). NoInfo: 6/2064 (0.3%). Certain keep: 2041/2064 (98.9%) ########################## YKL026C (504bp = 168AA) has 12 hits (GPX1) Glutathione peroxidase paralogue Spar (test2) non-orthologous hit at 88% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f481/497 (96.8%) over 500bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f499/503 (99.2%) over 504bp for offset 0 <== THIS IS REAL YKL026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2065 (0.4%). Conflicting: 9/2065 (0.4%). NoInfo: 6/2065 (0.3%). Certain keep: 2042/2065 (98.9%) ########################## YKL025C (2040bp = 680AA) has 25 hits (PAN3) 76-kDa subunit of Pab1p-dependent po..ease (PAN) (104) Spar (test2) orthologous hit at 90% f1484/1484 (100.0%) over 1484bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2034/2039 (99.8%) over 2040bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1906/1932 (98.7%) over 1939bp for offset 0 <== THIS IS REAL YKL025C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL025C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2066 (0.4%). Conflicting: 9/2066 (0.4%). NoInfo: 6/2066 (0.3%). Certain keep: 2043/2066 (98.9%) ########################## YKL024C (615bp = 205AA) has 7 hits (URA6) uridine-monophosphate kinase (uridylate kinase) Spar (test2) orthologous hit at 88% f615/615 (100.0%) over 615bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f615/615 (100.0%) over 615bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f610/614 (99.3%) over 615bp for offset 0 <== THIS IS REAL YKL024C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL024C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2067 (0.4%). Conflicting: 9/2067 (0.4%). NoInfo: 6/2067 (0.3%). Certain keep: 2044/2067 (98.9%) ########################## YKL022C (2523bp = 841AA) has 26 hits (CDC16) putative metal-binding nucleic acid..o cyclin B (183) Spar (test2) orthologous hit at 90% f1862/1871 (99.5%) over 1872bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1994/2027 (98.4%) over 2030bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1970/1983 (99.3%) over 1992bp for offset 0 <== THIS IS REAL YKL022C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL022C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2068 (0.4%). Conflicting: 9/2068 (0.4%). NoInfo: 6/2068 (0.3%). Certain keep: 2045/2068 (98.9%) ########################## YKL021C (1407bp = 469AA) has 33 hits (MAK11) contains four beta-transducin repeats Spar (test2) orthologous hit at 89% f1342/1406 (95.4%) over 1407bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1316/1399 (94.1%) over 1405bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1244/1256 (99.0%) over 1257bp for offset 0 <== THIS IS REAL YKL021C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL021C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2069 (0.4%). Conflicting: 9/2069 (0.4%). NoInfo: 6/2069 (0.3%). Certain keep: 2046/2069 (98.9%) ########################## YKL020C (3249bp = 1083AA) has 57 hits (SPT23) suppressor protein Spar (test2) orthologous hit at 88% f2530/2530 (100.0%) over 2530bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1424/1431 (99.5%) over 1436bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1933/2112 (91.5%) over 2138bp for offset 0 <== THIS IS REAL YKL020C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL020C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2070 (0.4%). Conflicting: 9/2070 (0.4%). NoInfo: 6/2070 (0.3%). Certain keep: 2047/2070 (98.9%) ########################## YKL019W (951bp = 317AA) has 4 hits (RAM2) CAAX farnesyltransferase alpha subunit Spar (test2) orthologous hit at 89% f947/950 (99.7%) over 951bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f948/950 (99.8%) over 951bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f941/949 (99.2%) over 951bp for offset 0 <== THIS IS REAL YKL019W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL019W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2071 (0.4%). Conflicting: 9/2071 (0.4%). NoInfo: 6/2071 (0.3%). Certain keep: 2048/2071 (98.9%) ########################## YKL018W (990bp = 330AA) has 9 hits (SWD2) Spar (test2) orthologous hit at 92% f407/407 (100.0%) over 407bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f990/990 (100.0%) over 990bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f759/780 (97.3%) over 783bp for offset 0 <== THIS IS REAL YKL018W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL018W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2072 (0.4%). Conflicting: 9/2072 (0.4%). NoInfo: 6/2072 (0.3%). Certain keep: 2049/2072 (98.9%) ########################## YKL017C (2052bp = 684AA) has 24 hits (HCS1) DNA helicase A Spar (test2) orthologous hit at 90% f2052/2052 (100.0%) over 2052bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2045/2050 (99.8%) over 2052bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2029/2045 (99.2%) over 2052bp for offset 0 <== THIS IS REAL YKL017C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL017C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2073 (0.4%). Conflicting: 9/2073 (0.4%). NoInfo: 6/2073 (0.3%). Certain keep: 2050/2073 (98.9%) ########################## YKL016C (525bp = 175AA) has 9 hits (ATP7) ATP synthase d subunit Spar (test2) orthologous hit at 90% f524/524 (100.0%) over 524bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f525/525 (100.0%) over 525bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f524/524 (100.0%) over 524bp for offset 0 <== THIS IS REAL YKL016C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL016C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2074 (0.4%). Conflicting: 9/2074 (0.4%). NoInfo: 6/2074 (0.3%). Certain keep: 2051/2074 (98.9%) ########################## YKL015W (2940bp = 980AA) has 49 hits (PUT3) zinc-finger transcription factor of ..omain type (126) Spar (test2) orthologous hit at 89% f2933/2934 (100.0%) over 2940bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1041/1074 (96.9%) over 1081bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f388/402 (96.5%) over 405bp for offset 0 <== THIS IS REAL YKL015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2075 (0.4%). Conflicting: 9/2075 (0.4%). NoInfo: 6/2075 (0.3%). Certain keep: 2052/2075 (98.9%) ########################## YKL013C (516bp = 172AA) has 5 hits (ARC19) involved in cortical actin patch integrity Spar (test2) orthologous hit at 95% f515/515 (100.0%) over 515bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f515/515 (100.0%) over 515bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f516/516 (100.0%) over 516bp for offset 0 <== THIS IS REAL YKL013C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL013C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2076 (0.4%). Conflicting: 9/2076 (0.4%). NoInfo: 6/2076 (0.3%). Certain keep: 2053/2076 (98.9%) ########################## YKL012W (1752bp = 584AA) has 15 hits (PRP40) U1 snRNP protein Spar (test2) orthologous hit at 88% f1743/1751 (99.5%) over 1752bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1502/1627 (92.3%) over 1647bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1705/1745 (97.7%) over 1752bp for offset 0 <== THIS IS REAL YKL012W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL012W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2077 (0.4%). Conflicting: 9/2077 (0.4%). NoInfo: 6/2077 (0.3%). Certain keep: 2054/2077 (98.9%) ########################## YKL011C (1062bp = 354AA) has 7 hits (CCE1) cruciform cutting endonuclease Spar (test2) orthologous hit at 86% f1062/1062 (100.0%) over 1062bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f1046/1058 (98.9%) over 1061bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1043/1058 (98.6%) over 1062bp for offset 0 <== THIS IS REAL YKL011C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL011C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2078 (0.4%). Conflicting: 9/2078 (0.4%). NoInfo: 6/2078 (0.3%). Certain keep: 2055/2078 (98.9%) ########################## YKL010C (4452bp = 1484AA) has 57 hits (UFD4) involved in ubiqitin-mediated prote..egredation (94) Spar (test2) orthologous hit at 90% f4446/4451 (99.9%) over 4452bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1916/1942 (98.7%) over 1949bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3316/3356 (98.8%) over 3362bp for offset 0 <== THIS IS REAL YKL010C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL010C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2079 (0.4%). Conflicting: 9/2079 (0.4%). NoInfo: 6/2079 (0.3%). Certain keep: 2056/2079 (98.9%) ########################## YKL009W (711bp = 237AA) has 7 hits (MRT4) involved in mRNA decay Spar (test2) orthologous hit at 93% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL YKL009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2080 (0.4%). Conflicting: 9/2080 (0.4%). NoInfo: 6/2080 (0.3%). Certain keep: 2057/2080 (98.9%) ########################## YKL008C (1257bp = 419AA) has 18 hits (LAC1) Homolog of the LAG1 longevity gene. Spar (test2) orthologous hit at 94% f1257/1257 (100.0%) over 1257bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1257/1257 (100.0%) over 1257bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1250/1256 (99.5%) over 1257bp for offset 0 <== THIS IS REAL YKL008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2081 (0.4%). Conflicting: 9/2081 (0.4%). NoInfo: 6/2081 (0.3%). Certain keep: 2058/2081 (98.9%) ########################## YKL007W (807bp = 269AA) has 7 hits (CAP1) alpha subunit of capping protein Spar (test2) orthologous hit at 89% f807/807 (100.0%) over 807bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f802/806 (99.5%) over 807bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f807/807 (100.0%) over 807bp for offset 0 <== THIS IS REAL YKL007W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL007W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2082 (0.4%). Conflicting: 9/2082 (0.4%). NoInfo: 6/2082 (0.3%). Certain keep: 2059/2082 (98.9%) ########################## YKL004W (1206bp = 402AA) has 7 hits (AUR1) involved in phospolipid metabolism Spar (test2) orthologous hit at 93% f1206/1206 (100.0%) over 1206bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1206/1206 (100.0%) over 1206bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1206/1206 (100.0%) over 1206bp for offset 0 <== THIS IS REAL YKL004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2083 (0.4%). Conflicting: 9/2083 (0.4%). NoInfo: 6/2083 (0.3%). Certain keep: 2060/2083 (98.9%) ########################## YKL003C (396bp = 132AA) has 4 hits (MRP17) Mitochondrial ribosomal protein MRP17 Spar (test2) orthologous hit at 92% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f396/396 (100.0%) over 396bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f395/395 (100.0%) over 395bp for offset 0 <== THIS IS REAL YKL003C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL003C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2084 (0.4%). Conflicting: 9/2084 (0.4%). NoInfo: 6/2084 (0.3%). Certain keep: 2061/2084 (98.9%) ########################## YKL001C (609bp = 203AA) has 5 hits (MET14) adenylylsulfate kinase Spar (test2) orthologous hit at 92% f609/609 (100.0%) over 609bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f609/609 (100.0%) over 609bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f609/609 (100.0%) over 609bp for offset 0 <== THIS IS REAL YKL001C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKL001C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2085 (0.4%). Conflicting: 9/2085 (0.4%). NoInfo: 6/2085 (0.3%). Certain keep: 2062/2085 (98.9%) ########################## YKR001C (2115bp = 705AA) has 19 hits (VPS1) putative GTP-binding protein; simila..x proteins (106) Spar (test2) orthologous hit at 93% f2114/2114 (100.0%) over 2114bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2105/2113 (99.6%) over 2114bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1797/1839 (97.7%) over 1846bp for offset 0 <== THIS IS REAL YKR001C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR001C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2086 (0.4%). Conflicting: 9/2086 (0.4%). NoInfo: 6/2086 (0.3%). Certain keep: 2063/2086 (98.9%) ########################## YKR002W (1707bp = 569AA) has 8 hits (PAP1) poly(A) polymerase Spar (test2) orthologous hit at 92% f1707/1707 (100.0%) over 1707bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1707/1707 (100.0%) over 1707bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1706/1707 (99.9%) over 1707bp for offset 0 <== THIS IS REAL YKR002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2087 (0.4%). Conflicting: 9/2087 (0.4%). NoInfo: 6/2087 (0.3%). Certain keep: 2064/2087 (98.9%) ########################## YKR003W (1347bp = 449AA) has 8 hits (OSH6) Oxysterol Binding Protein Spar (test2) orthologous hit at 91% f1344/1344 (100.0%) over 1347bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1347/1347 (100.0%) over 1347bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1344/1346 (99.9%) over 1347bp for offset 0 <== THIS IS REAL YKR003W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR003W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2088 (0.4%). Conflicting: 9/2088 (0.4%). NoInfo: 6/2088 (0.3%). Certain keep: 2065/2088 (98.9%) ########################## YKR004C (879bp = 293AA) has 12 hits (ECM9) (putative) involved in cell wall biogenesis Spar (test2) orthologous hit at 85% f876/878 (99.8%) over 878bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f849/874 (97.1%) over 875bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f603/640 (94.2%) over 644bp for offset 0 <== THIS IS REAL YKR004C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR004C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2089 (0.4%). Conflicting: 9/2089 (0.4%). NoInfo: 6/2089 (0.3%). Certain keep: 2066/2089 (98.9%) ########################## YKR006C (828bp = 276AA) has 8 hits (MRPL13) mitochondrial ribosomal protein YmL13 Spar (test2) orthologous hit at 88% f822/826 (99.5%) over 827bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f814/825 (98.7%) over 827bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f716/808 (88.6%) over 823bp for offset 0 Sbay (test3) Longest island has f98 at 78% over 600bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 828 |_________|__________|__________|__________|__________|__________|__________|_________|___| 98f 78% 600bp Sb276full |........................|================================================================|> YKR006C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR006C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2090 (0.4%). Conflicting: 9/2090 (0.4%). NoInfo: 6/2090 (0.3%). Certain keep: 2067/2090 (98.9%) ########################## YKR008W (1878bp = 626AA) has 23 hits (RSC4) Member of RSC complex. Spar (test2) orthologous hit at 91% f1874/1877 (99.8%) over 1878bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1873/1875 (99.9%) over 1878bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1182/1232 (95.9%) over 1235bp for offset 0 <== THIS IS REAL YKR008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2091 (0.4%). Conflicting: 9/2091 (0.4%). NoInfo: 6/2091 (0.3%). Certain keep: 2068/2091 (98.9%) ########################## YKR009C (2703bp = 901AA) has 6 hits (FOX2) peroxisomal multifunctional beta-oxid..on protein (93) Spar (test2) orthologous hit at 90% f2703/2703 (100.0%) over 2703bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2687/2701 (99.5%) over 2703bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2684/2699 (99.4%) over 2703bp for offset 0 <== THIS IS REAL YKR009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2092 (0.4%). Conflicting: 9/2092 (0.4%). NoInfo: 6/2092 (0.3%). Certain keep: 2069/2092 (98.9%) ########################## YKR010C (2316bp = 772AA) has 26 hits (TOF2) topoisomerase I interacting factor 2 Spar (test2) orthologous hit at 83% f2271/2304 (98.6%) over 2316bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f790/833 (94.8%) over 843bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f594/641 (92.7%) over 644bp for offset 0 <== THIS IS REAL YKR010C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR010C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2093 (0.4%). Conflicting: 9/2093 (0.4%). NoInfo: 6/2093 (0.3%). Certain keep: 2070/2093 (98.9%) ########################## YKR011C (1062bp = 354AA) has 10 hits (TOS5) Hypothetical ORF Spar (test2) orthologous hit at 90% f1062/1062 (100.0%) over 1062bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1047/1056 (99.1%) over 1062bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 74% f711/779 (91.3%) over 784bp for offset 0 <== THIS IS REAL YKR011C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR011C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2094 (0.4%). Conflicting: 9/2094 (0.4%). NoInfo: 6/2094 (0.3%). Certain keep: 2071/2094 (98.9%) ########################## YKR013W (990bp = 330AA) has 34 hits (PRY2) Similar to plant PR-1 class of pathog..d proteins (99) Flanking ORFs are: YKR010C and YKR012C. YKR013W skipped ########################## YKR014C (705bp = 235AA) has 42 hits (YPT52) probable purine nucleotide-binding protein Spar (test2) orthologous hit at 93% f705/705 (100.0%) over 705bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f705/705 (100.0%) over 705bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f704/705 (99.9%) over 705bp for offset 0 <== THIS IS REAL YKR014C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR014C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2095 (0.4%). Conflicting: 9/2095 (0.4%). NoInfo: 6/2095 (0.3%). Certain keep: 2072/2095 (98.9%) ########################## YKR019C (1848bp = 616AA) has 14 hits (IRS4) involved in rDNA silencing Spar (test2) orthologous hit at 88% f1836/1846 (99.5%) over 1848bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1826/1842 (99.1%) over 1848bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1794/1840 (97.5%) over 1848bp for offset 0 <== THIS IS REAL YKR019C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR019C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2096 (0.4%). Conflicting: 9/2096 (0.4%). NoInfo: 6/2096 (0.3%). Certain keep: 2073/2096 (98.9%) ########################## YKR020W (495bp = 165AA) has 24 hits (WHI6) Spar (test2) orthologous hit at 89% f495/495 (100.0%) over 495bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f495/495 (100.0%) over 495bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f486/493 (98.6%) over 495bp for offset 0 <== THIS IS REAL YKR020W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR020W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2097 (0.4%). Conflicting: 9/2097 (0.4%). NoInfo: 6/2097 (0.3%). Certain keep: 2074/2097 (98.9%) ########################## YKR024C (2229bp = 743AA) has 43 hits (DBP7) putative RNA helicase Spar (test2) orthologous hit at 89% f2221/2225 (99.8%) over 2229bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2217/2226 (99.6%) over 2229bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2211/2223 (99.5%) over 2229bp for offset 0 <== THIS IS REAL YKR024C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR024C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2098 (0.4%). Conflicting: 9/2098 (0.4%). NoInfo: 6/2098 (0.3%). Certain keep: 2075/2098 (98.9%) ########################## YKR025W (849bp = 283AA) has 88 hits (RPC37) RNA Polymerase C (III) 37 kDa subunit Spar (test2) orthologous hit at 89% f849/849 (100.0%) over 849bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f743/780 (95.3%) over 783bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f563/603 (93.4%) over 606bp for offset 1 <== THIS IS REAL YKR025W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR025W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2099 (0.4%). Conflicting: 9/2099 (0.4%). NoInfo: 6/2099 (0.3%). Certain keep: 2076/2099 (98.9%) ########################## YKR026C (918bp = 306AA) has 4 hits (GCN3) 34 KD alpha subunit of eIF2B Spar (test2) orthologous hit at 92% f918/918 (100.0%) over 918bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f918/918 (100.0%) over 918bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f573/648 (88.4%) over 650bp for offset 0 Sbay (test3) Longest island has f99 at 85% over 578bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 90918 |________|_________|_________|_________|_________|________|_________|_________|_________|_| 99f 85% 578bp Sb1043brk |......|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YKR026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2100 (0.4%). Conflicting: 9/2100 (0.4%). NoInfo: 6/2100 (0.3%). Certain keep: 2077/2100 (98.9%) ########################## YKR028W (3297bp = 1099AA) has 121 hits (SAP190) Type 2A-related protein phosphatase Spar (test2) orthologous hit at 88% f2964/3272 (90.6%) over 3297bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2613/2675 (97.7%) over 2692bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 71% f2534/3149 (80.5%) over 3227bp for offset 0 Sbay (test3) Longest island has f96 at 81% over 2149bp <== THIS IS REAL 0 10020030400500600708009001k 1k1k 1k 1k1k 1k 1k 1k1k 2k 2k 2k2k 2k 2k2k 2k 2k 2k3k 3k 3k 3k |_|__|__|_|__|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|__| 96f 81% 2149bp Sb292brk |............|==========================================================>...............>| YKR028W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR028W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2101 (0.4%). Conflicting: 9/2101 (0.4%). NoInfo: 6/2101 (0.3%). Certain keep: 2078/2101 (98.9%) ########################## YKR029C (2256bp = 752AA) has 59 hits (SET3) Spar (test2) orthologous hit at 82% f1113/1189 (93.6%) over 1201bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1026/1073 (95.6%) over 1085bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f554/594 (93.3%) over 606bp for offset 2 <== THIS IS REAL YKR029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2102 (0.4%). Conflicting: 9/2102 (0.4%). NoInfo: 6/2102 (0.3%). Certain keep: 2079/2102 (98.9%) ########################## YKR031C (5052bp = 1684AA) has 36 hits (SPO14) Phospholipase D Spar (test2) orthologous hit at 90% f5035/5047 (99.8%) over 5052bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3287/3331 (98.7%) over 3339bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2107/2126 (99.1%) over 2129bp for offset 0 <== THIS IS REAL YKR031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2103 (0.4%). Conflicting: 9/2103 (0.4%). NoInfo: 6/2103 (0.3%). Certain keep: 2080/2103 (98.9%) ########################## YKR034W (810bp = 270AA) has 12 hits (DAL80) negative regulator of multiple nitro..olic genes (99) Flanking ORFs are: YKR030W and YKR032W. YKR034W skipped ########################## YKR035W-A (615bp = 205AA) has 12 hits (DID2) Rad52p inhibitor Flanking ORFs are: YKR030W and YKR032W. YKR035W-A skipped ########################## YKR036C (1980bp = 660AA) has 16 hits (CAF4) component of CCR4 transcriptional complex Spar (test2) orthologous hit at 85% f1955/1978 (98.8%) over 1980bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 74% f1186/1368 (86.7%) over 1386bp for offset 0 Smik (test3) Longest island has f99 at 81% over 1055bp <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1843/1920 (96.0%) over 1933bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|___|____|___|____|___|____|____|___|____|___|____|___|____|___|____|___| 99f 81% 1055bp Sm117full |...............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YKR036C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR036C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2104 (0.4%). Conflicting: 9/2104 (0.4%). NoInfo: 6/2104 (0.3%). Certain keep: 2081/2104 (98.9%) ########################## YKR037C (888bp = 296AA) has 8 hits (SPC34) component of spindle pole Spar (test2) orthologous hit at 90% f883/887 (99.5%) over 888bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f883/886 (99.7%) over 887bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f549/884 (62.1%) over 887bp for offset 0 Sbay (test3) Longest island has f98 at 79% over 560bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 888 |_________|_________|_________|_________|_________|_________|_________|__________|________| 98f 79% 560bp 100f 84% 328bp Sb288full |=======================================================>|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YKR037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2105 (0.4%). Conflicting: 9/2105 (0.4%). NoInfo: 6/2105 (0.3%). Certain keep: 2082/2105 (98.9%) ########################## YKR039W (1809bp = 603AA) has 76 hits (GAP1) general amino acid permease Spar (test2) orthologous hit at 90% f1809/1809 (100.0%) over 1809bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1809/1809 (100.0%) over 1809bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1786/1803 (99.1%) over 1809bp for offset 0 <== THIS IS REAL YKR039W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR039W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2106 (0.4%). Conflicting: 9/2106 (0.4%). NoInfo: 6/2106 (0.3%). Certain keep: 2083/2106 (98.9%) ########################## YKR042W (1353bp = 451AA) has 207 hits (UTH1) involved in cell growth Spar (test2) orthologous hit at 78% f1030/1186 (86.8%) over 1200bp for offset 0 Spar (test3) Longest island has f100 at 89% over 894bp <== THIS IS REAL Smik (test2) orthologous hit at 76% f1093/1287 (84.9%) over 1307bp for offset 0 Smik (test3) Longest island has f96 at 84% over 976bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1164/1330 (87.5%) over 1350bp for offset 0 Sbay (test3) Longest island has f94 at 81% over 1109bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|_____|______|______|_____|______|______|_____|______|______|_____|______|___| 100f 89% 894bp Sp404full |....................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 96f 84% 976bp Sm117full |......................|===============================================================|> 94f 81% 1109bp Sb288full |.................|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo|> YKR042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2107 (0.4%). Conflicting: 9/2107 (0.4%). NoInfo: 6/2107 (0.3%). Certain keep: 2084/2107 (98.9%) ########################## YKR044W (1332bp = 444AA) has 10 hits (UIP5) YKR044w Spar (test2) orthologous hit at 88% f1324/1331 (99.5%) over 1332bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1314/1329 (98.9%) over 1332bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1194/1211 (98.6%) over 1215bp for offset 0 <== THIS IS REAL YKR044W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR044W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2108 (0.4%). Conflicting: 9/2108 (0.4%). NoInfo: 6/2108 (0.3%). Certain keep: 2085/2108 (98.9%) ########################## YKR048C (1254bp = 418AA) has 177 hits (NAP1) nucleosome assembly protein I Flanking ORFs are: YKR043C and YKR045C. YKR048C skipped ########################## YKR050W (2670bp = 890AA) has 19 hits (TRK2) membrane protein; low affinity potas.. transport (94) Spar (test2) orthologous hit at 88% f2648/2664 (99.4%) over 2670bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2085/2110 (98.8%) over 2119bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1505/1532 (98.2%) over 1536bp for offset 2 <== THIS IS REAL YKR050W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR050W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2109 (0.4%). Conflicting: 9/2109 (0.4%). NoInfo: 6/2109 (0.3%). Certain keep: 2086/2109 (98.9%) ########################## YKR052C (915bp = 305AA) has 11 hits (MRS4) mitochondrial carrier protein, highly..s to Mrs3p (100) Spar (test2) orthologous hit at 93% f915/915 (100.0%) over 915bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f554/554 (100.0%) over 554bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f915/915 (100.0%) over 915bp for offset 0 <== THIS IS REAL YKR052C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR052C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2110 (0.4%). Conflicting: 9/2110 (0.4%). NoInfo: 6/2110 (0.3%). Certain keep: 2087/2110 (98.9%) ########################## YKR053C (1215bp = 405AA) has 9 hits (YSR3) DHS-1-P phosphatase Spar (test2) orthologous hit at 90% f1215/1215 (100.0%) over 1215bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 64% f766/966 (79.3%) over 994bp for offset 2 Smik (test3) Longest island has f86 at 66% over 434bp Smik (test2) non-orthologous hit at 83% f686/694 (98.8%) over 696bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 75% f833/858 (97.1%) over 861bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k1k |______|______|_______|______|_______|______|______|_______|______|_______|______|______|_| 86f 66% 434bp 80f 65% 341bp Sm831brk |.|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>...............|xxxxxxxxxxxxxxxxxxxxxxxx> | YKR053C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR053C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2111 (0.4%). Conflicting: 9/2111 (0.4%). NoInfo: 6/2111 (0.3%). Certain keep: 2088/2111 (98.9%) ########################## YKR054C (12279bp = 4093AA) has 37 hits (DYN1) heavy chain of cytoplasmic dynein Spar (test2) orthologous hit at 87% f12252/12274 (99.8%) over 12279bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f6909/6994 (98.8%) over 7013bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f2688/2873 (93.6%) over 2897bp for offset 0 <== THIS IS REAL YKR054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2112 (0.4%). Conflicting: 9/2112 (0.4%). NoInfo: 6/2112 (0.3%). Certain keep: 2089/2112 (98.9%) ########################## YKR055W (876bp = 292AA) has 23 hits (RHO4) ras homolog--GTP binding protein Spar (test2) orthologous hit at 90% f876/876 (100.0%) over 876bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f870/875 (99.4%) over 876bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f863/874 (98.7%) over 876bp for offset 0 <== THIS IS REAL YKR055W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR055W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2113 (0.4%). Conflicting: 9/2113 (0.4%). NoInfo: 6/2113 (0.3%). Certain keep: 2090/2113 (98.9%) ########################## YKR056W (1854bp = 618AA) has 9 hits (TRM2) Endo-exonuclease Spar (test2) orthologous hit at 89% f1656/1800 (92.0%) over 1805bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1640/1847 (88.8%) over 1854bp for offset 2 Smik (test3) Longest island has f99 at 83% over 1648bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1618/1829 (88.5%) over 1836bp for offset 1 Sbay (test3) Longest island has f97 at 78% over 1671bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|____|____|___|____|____|____|____|____|____|___|____|____|____|____|__| 99f 83% 1648bp Sm120full |....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>....| 97f 78% 1671bp Sb284full |...|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>....| YKR056W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR056W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2114 (0.4%). Conflicting: 9/2114 (0.4%). NoInfo: 6/2114 (0.3%). Certain keep: 2091/2114 (98.9%) ########################## YKR058W (1443bp = 481AA) has 28 hits (GLG1) glycogen synthesis initiator Spar (test2) orthologous hit at 79% f809/828 (97.7%) over 832bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f685/845 (81.1%) over 863bp for offset 0 Smik (test3) Longest island has f96 at 78% over 632bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f727/826 (88.0%) over 846bp for offset 2 Sbay (test3) Longest island has f96 at 77% over 537bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|______|_____|_____|_____|______|_____|_____|_____|______|_____|__| 96f 78% 632bp Sm120full |======================================>.............> | 96f 77% 537bp 79f 67% 219bp Sb284full |================================>......|============> | YKR058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2115 (0.4%). Conflicting: 9/2115 (0.4%). NoInfo: 6/2115 (0.3%). Certain keep: 2092/2115 (98.9%) ########################## YKR059W (1188bp = 396AA) has 75 hits (TIF1) translation initiation factor eIF4A Spar (test2) orthologous hit at 96% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL YKR059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2116 (0.4%). Conflicting: 9/2116 (0.4%). NoInfo: 6/2116 (0.3%). Certain keep: 2093/2116 (98.9%) ########################## YKR061W (1278bp = 426AA) has 42 hits (KTR2) putative mannosyltransferase; type 2..ne protein (97) Spar (test2) orthologous hit at 91% f1273/1276 (99.8%) over 1277bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1230/1250 (98.4%) over 1252bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1249/1273 (98.1%) over 1277bp for offset 0 <== THIS IS REAL YKR061W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR061W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2117 (0.4%). Conflicting: 9/2117 (0.4%). NoInfo: 6/2117 (0.3%). Certain keep: 2094/2117 (98.9%) ########################## YKR062W (987bp = 329AA) has 5 hits (TFA2) Small subunit of TFIIE transcription factor Spar (test2) orthologous hit at 91% f987/987 (100.0%) over 987bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f986/987 (99.9%) over 987bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f732/736 (99.5%) over 736bp for offset 0 <== THIS IS REAL YKR062W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR062W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2118 (0.4%). Conflicting: 9/2118 (0.4%). NoInfo: 6/2118 (0.3%). Certain keep: 2095/2118 (98.9%) ########################## YKR063C (1509bp = 503AA) has 84 hits (LAS1) May regulate expression of genes inv..phogenesis (120) Spar (test2) orthologous hit at 87% f1503/1506 (99.8%) over 1509bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 63% f755/1229 (61.4%) over 1269bp for offset 2 Smik (test3) Longest island has f97 at 81% over 533bp <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1481/1503 (98.5%) over 1509bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 11k |____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|| 97f 81% 533bp Sm120full |==============================>...........................................> | YKR063C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR063C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2119 (0.4%). Conflicting: 9/2119 (0.4%). NoInfo: 6/2119 (0.3%). Certain keep: 2096/2119 (98.9%) ########################## YKR066C (1086bp = 362AA) has 8 hits (CCP1) Cytochrome-c peroxidase Spar (test2) orthologous hit at 89% f1083/1083 (100.0%) over 1086bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1082/1083 (99.9%) over 1086bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1006/1027 (98.0%) over 1029bp for offset 0 <== THIS IS REAL YKR066C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR066C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2120 (0.4%). Conflicting: 9/2120 (0.4%). NoInfo: 6/2120 (0.3%). Certain keep: 2097/2120 (98.9%) ########################## YKR067W (2232bp = 744AA) has 19 hits (GPT2) YKR067w Spar (test2) orthologous hit at 88% f2232/2232 (100.0%) over 2232bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2214/2228 (99.4%) over 2232bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2095/2103 (99.6%) over 2113bp for offset 0 <== THIS IS REAL YKR067W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR067W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2121 (0.4%). Conflicting: 9/2121 (0.4%). NoInfo: 6/2121 (0.3%). Certain keep: 2098/2121 (98.9%) ########################## YKR068C (582bp = 194AA) has 9 hits (BET3) transport protein particle (TRAPP) component Spar (test2) orthologous hit at 92% f582/582 (100.0%) over 582bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f497/497 (100.0%) over 497bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f582/582 (100.0%) over 582bp for offset 0 <== THIS IS REAL YKR068C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR068C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2122 (0.4%). Conflicting: 9/2122 (0.4%). NoInfo: 6/2122 (0.3%). Certain keep: 2099/2122 (98.9%) ########################## YKR069W (1782bp = 594AA) has 6 hits (MET1) siroheme synthase Spar (test2) orthologous hit at 89% f1773/1778 (99.7%) over 1782bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1761/1775 (99.2%) over 1777bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1585/1601 (99.0%) over 1604bp for offset 0 <== THIS IS REAL YKR069W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR069W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2123 (0.4%). Conflicting: 9/2123 (0.4%). NoInfo: 6/2123 (0.3%). Certain keep: 2100/2123 (98.9%) ########################## YKR071C (1047bp = 349AA) has 25 hits (DRE2) Protein required for cell viability Spar (test2) orthologous hit at 86% f1047/1047 (100.0%) over 1047bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1037/1043 (99.4%) over 1047bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f593/652 (91.0%) over 656bp for offset 1 <== THIS IS REAL YKR071C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR071C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2124 (0.4%). Conflicting: 9/2124 (0.4%). NoInfo: 6/2124 (0.3%). Certain keep: 2101/2124 (98.9%) ########################## YKR072C (1689bp = 563AA) has 953 hits (SIS2) sit4 suppressor Spar (test2) orthologous hit at 87% f1667/1676 (99.5%) over 1689bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1665/1684 (98.9%) over 1689bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1614/1669 (96.7%) over 1689bp for offset 0 <== THIS IS REAL YKR072C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR072C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2125 (0.4%). Conflicting: 9/2125 (0.4%). NoInfo: 6/2125 (0.3%). Certain keep: 2102/2125 (98.9%) ########################## YKR076W (1113bp = 371AA) has 15 hits (ECM4) (putative) involved in cell wall biogenesis Spar (test2) orthologous hit at 89% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1113/1113 (100.0%) over 1113bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f810/817 (99.1%) over 818bp for offset 0 <== THIS IS REAL YKR076W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR076W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2126 (0.4%). Conflicting: 9/2126 (0.4%). NoInfo: 6/2126 (0.3%). Certain keep: 2103/2126 (98.9%) ########################## YKR080W (963bp = 321AA) has 7 hits (MTD1) NAD-dependent 5,10-methylenetetrahydra..ydrogenase (100) Spar (test2) orthologous hit at 93% f963/963 (100.0%) over 963bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f963/963 (100.0%) over 963bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f962/962 (100.0%) over 962bp for offset 0 <== THIS IS REAL YKR080W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR080W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2127 (0.4%). Conflicting: 9/2127 (0.4%). NoInfo: 6/2127 (0.3%). Certain keep: 2104/2127 (98.9%) ########################## YKR081C (1035bp = 345AA) has 25 hits (RPF2) Spar (test2) orthologous hit at 93% f1035/1035 (100.0%) over 1035bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1035/1035 (100.0%) over 1035bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1021/1027 (99.4%) over 1034bp for offset 0 <== THIS IS REAL YKR081C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR081C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2128 (0.4%). Conflicting: 9/2128 (0.4%). NoInfo: 6/2128 (0.3%). Certain keep: 2105/2128 (98.9%) ########################## YKR082W (3474bp = 1158AA) has 24 hits (NUP133) nuclear pore protein Spar (test2) orthologous hit at 89% f3474/3474 (100.0%) over 3474bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f3459/3471 (99.7%) over 3474bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3449/3469 (99.4%) over 3474bp for offset 0 <== THIS IS REAL YKR082W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR082W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2129 (0.4%). Conflicting: 9/2129 (0.4%). NoInfo: 6/2129 (0.3%). Certain keep: 2106/2129 (98.9%) ########################## YKR083C (402bp = 134AA) has 54 hits (DAD2) Interacts with Duo1 and Dam1 Spar (test2) orthologous hit at 89% f402/402 (100.0%) over 402bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f395/401 (98.5%) over 402bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f381/400 (95.3%) over 402bp for offset 0 <== THIS IS REAL YKR083C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR083C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2130 (0.4%). Conflicting: 9/2130 (0.4%). NoInfo: 6/2130 (0.3%). Certain keep: 2107/2130 (98.9%) ########################## YKR084C (1836bp = 612AA) has 15 hits (HBS1) Protein related to translation elong..t1p/Sup35p (135) Spar (test2) orthologous hit at 89% f1836/1836 (100.0%) over 1836bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1828/1834 (99.7%) over 1835bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1792/1827 (98.1%) over 1835bp for offset 0 <== THIS IS REAL YKR084C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR084C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2131 (0.4%). Conflicting: 9/2131 (0.4%). NoInfo: 6/2131 (0.3%). Certain keep: 2108/2131 (98.9%) ########################## YKR085C (588bp = 196AA) has 3 hits (MRPL20) 22.3 kDa mitochondrial ribosomal lar..of E. coli (134) Spar (test2) orthologous hit at 90% f588/588 (100.0%) over 588bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f588/588 (100.0%) over 588bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f588/588 (100.0%) over 588bp for offset 0 <== THIS IS REAL YKR085C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR085C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2132 (0.4%). Conflicting: 9/2132 (0.4%). NoInfo: 6/2132 (0.3%). Certain keep: 2109/2132 (98.9%) ########################## YKR086W (3216bp = 1072AA) has 51 hits (PRP16) putative ATP-binding protein Spar (test2) orthologous hit at 87% f3216/3216 (100.0%) over 3216bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f3181/3209 (99.1%) over 3216bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f2749/2779 (98.9%) over 2783bp for offset 0 <== THIS IS REAL YKR086W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR086W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2133 (0.4%). Conflicting: 9/2133 (0.4%). NoInfo: 6/2133 (0.3%). Certain keep: 2110/2133 (98.9%) ########################## YKR090W (2121bp = 707AA) has 18 hits (PXL1) Paxillin-like protein Spar (test2) orthologous hit at 80% f1447/1559 (92.8%) over 1565bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f1289/1439 (89.6%) over 1452bp for offset 0 Smik (test3) Longest island has f99 at 80% over 1218bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1349/1461 (92.3%) over 1483bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 22k |___|___|___|___|____|___|___|___|____|___|___|___|____|___|___|___|____|___|___|___|____|| 99f 80% 1218bp Sm122full |..........|==================================================| YKR090W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR090W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2134 (0.4%). Conflicting: 9/2134 (0.4%). NoInfo: 6/2134 (0.3%). Certain keep: 2111/2134 (98.9%) ########################## YKR091W (459bp = 153AA) has 6 hits (SRL3) Suppressor of rad53 lethality Spar (test2) orthologous hit at 90% f323/327 (98.8%) over 328bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f323/327 (98.8%) over 328bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f302/307 (98.4%) over 308bp for offset 0 <== THIS IS REAL YKR091W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR091W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2135 (0.4%). Conflicting: 9/2135 (0.4%). NoInfo: 6/2135 (0.3%). Certain keep: 2112/2135 (98.9%) ########################## YKR092C (1221bp = 407AA) has 741 hits (SRP40) nucleolar protein that is immunolo..ed bodies. (187) Spar (test2) orthologous hit at 72% f838/991 (84.6%) over 1020bp for offset 0 Spar (test3) Longest island has f95 at 80% over 746bp <== THIS IS REAL Smik (test2) orthologous hit at 71% f896/935 (95.8%) over 957bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f994/1142 (87.0%) over 1173bp for offset 1 Sbay (test3) Longest island has f98 at 80% over 420bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k1k |______|______|_______|______|______|_______|______|______|_______|______|_______|______|_| 95f 80% 746bp Sp404full |.....................|=====================================================|> 92f 65% 341bp 98f 80% 420bp Sb283full |............|oooooooooooooooooooooooo>...................|oooooooooooooooooooooooooooo|> YKR092C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR092C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2136 (0.4%). Conflicting: 9/2136 (0.4%). NoInfo: 6/2136 (0.3%). Certain keep: 2113/2136 (98.9%) ########################## YKR093W (1806bp = 602AA) (tdist=49.2k) has 4 hits (PTR2) Peptide transporter Spar (test2) non-orthologous hit at 91% f1805/1805 (100.0%) over 1805bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1804/1804 (100.0%) over 1804bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f1772/1794 (98.8%) over 1795bp for offset 0 <== THIS IS REAL YKR093W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR093W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2137 (0.4%). Conflicting: 9/2137 (0.4%). NoInfo: 6/2137 (0.3%). Certain keep: 2114/2137 (98.9%) ########################## YKR095W (5628bp = 1876AA) (tdist=41.3k) has 325 hits (MLP1) colied-coil protein ..in and TPR (117) Spar (test2) non-orthologous hit at 86% f5590/5616 (99.5%) over 5622bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f2384/2522 (94.5%) over 2536bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f4518/4775 (94.6%) over 4811bp for offset 0 <== THIS IS REAL YKR095W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR095W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2138 (0.4%). Conflicting: 9/2138 (0.4%). NoInfo: 6/2138 (0.3%). Certain keep: 2115/2138 (98.9%) ########################## YKR097W (1650bp = 550AA) (tdist=34.0k) has 6 hits (PCK1) phosphoenolpyruvate car..oxylkinase (91) Spar (test2) orthologous hit at 92% f1646/1649 (99.8%) over 1650bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1639/1646 (99.6%) over 1649bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1643/1643 (100.0%) over 1643bp for offset 0 <== THIS IS REAL YKR097W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR097W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2139 (0.4%). Conflicting: 9/2139 (0.4%). NoInfo: 6/2139 (0.3%). Certain keep: 2116/2139 (98.9%) ########################## YKR098C (2154bp = 718AA) (tdist=31.6k) has 23 hits (UBP11) Ubiquitin-specific protease Spar (test2) orthologous hit at 87% f1367/1381 (99.0%) over 1384bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 71% f1093/1361 (80.3%) over 1383bp for offset 0 Smik (test3) Longest island has f97 at 80% over 922bp <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1506/1693 (89.0%) over 1724bp for offset 0 Sbay (test3) Longest island has f96 at 77% over 962bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k |___|___|___|___|___|____|___|___|___|___|___|____|___|___|___|___|____|___|___|___|___|__| 97f 80% 922bp Sm123full |..|=====================================>................| 96f 73% 596bp 96f 77% 962bp Sb959full |=======================>.......|=======================================> | YKR098C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR098C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2140 (0.4%). Conflicting: 9/2140 (0.4%). NoInfo: 6/2140 (0.3%). Certain keep: 2117/2140 (98.9%) ########################## YKR099W (2436bp = 812AA) (tdist=28.5k) has 9 hits (BAS1) transcription factor Spar (test2) orthologous hit at 89% f2433/2433 (100.0%) over 2436bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2419/2431 (99.5%) over 2436bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2186/2429 (90.0%) over 2436bp for offset 2 Sbay (test3) Longest island has f99 at 81% over 2200bp <== THIS IS REAL 0 100 200 300400 500 600700 800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k2k |__|___|___|__|___|___|__|___|___|__|___|___|___|__|___|___|__|___|___|__|___|___|__|___|_| 99f 81% 2200bp 97f 74% 2Sb959full |================================================================================|xxxxxxxx| YKR099W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR099W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2141 (0.4%). Conflicting: 9/2141 (0.4%). NoInfo: 6/2141 (0.3%). Certain keep: 2118/2141 (98.9%) ########################## YKR101W (2037bp = 679AA) (tdist=24.3k) has 12 hits (SIR1) repressor of silent mating loci Spar (test2) orthologous hit at 82% f1662/1774 (93.7%) over 1785bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 75% f1346/1473 (91.4%) over 1489bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f1343/1464 (91.7%) over 1483bp for offset 1 <== THIS IS REAL YKR101W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR101W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2142 (0.4%). Conflicting: 9/2142 (0.4%). NoInfo: 6/2142 (0.3%). Certain keep: 2119/2142 (98.9%) ########################## YKR102W (3510bp = 1170AA) (tdist=16.9k) has 129 hits (FLO10) Protein with simila..tein Flo1p (114) Spar (test2) orthologous hit at 76% f1255/1442 (87.0%) over 1472bp for offset 1 Spar (test3) Longest island has f99 at 88% over 1005bp <== THIS IS REAL Smik (test2) non-orthologous hit at 72% f1131/1323 (85.5%) over 1360bp for offset 0 Smik (test3) Longest island has f99 at 83% over 896bp <== THIS IS REAL Sbay (test2) orthologous hit at 61% f1203/1702 (70.7%) over 1777bp for offset 1 Sbay (test3) Longest island has f98 at 79% over 522bp <== THIS IS REAL 0 100203004050060700800901k 1k1k 1k1k 1k 1k1k 1k1k 2k2k 2k2k 2k 2k2k 2k2k 2k3k 3k 3k3k 3k33k |_|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|| 99f 88% 1005bp Sp404brk |========================>...........> | 99f 83% 896bp Sm1283brk |======================>...........> | 98f 79% 522bp Sb958brk ||============>...............................> | YKR102W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YKR102W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2143 (0.4%). Conflicting: 9/2143 (0.4%). NoInfo: 6/2143 (0.3%). Certain keep: 2120/2143 (98.9%) ########################## YLL063C (1425bp = 475AA) (tdist=14.6k) has 3 hits (AYT1) transacetylase Sbay (test2) non-orthologous hit at 74% f476/898 (53.0%) over 913bp for offset 1 Sbay (test3) Longest island has f97 at 76% over 358bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k1k |_____|_____|_____|______|_____|_____|______|_____|_____|______|_____|_____|______|_____|_| 97f 76% 358bp 96f 74% 318bp Sb690full |..............|=====================|xxxxxxxxxxxxxxxxxxx> | YLL063C: kill: - keep: Sbay Not a single protein hit, and yet, certain keep YLL063C - Certain Keep. Kill and Keep Sbay Current total: Certain kills: 8/2144 (0.4%). Conflicting: 9/2144 (0.4%). NoInfo: 6/2144 (0.3%). Certain keep: 2121/2144 (98.9%) ########################## YLL062C (975bp = 325AA) (tdist=16.6k) has 20 hits (MHT1) S-methylmethionine:homo..ransferase (108) Spar (test2) orthologous hit at 87% f970/970 (100.0%) over 970bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f969/973 (99.6%) over 974bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 75% f926/968 (95.7%) over 975bp for offset 0 <== THIS IS REAL YLL062C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL062C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2145 (0.4%). Conflicting: 9/2145 (0.4%). NoInfo: 6/2145 (0.3%). Certain keep: 2122/2145 (98.9%) ########################## YLL061W (1752bp = 584AA) (tdist=17.9k) has 49 hits (MMP1) High affinity S-methyl..e permease (99) Spar (test2) orthologous hit at 90% f1752/1752 (100.0%) over 1752bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 69% f1576/1650 (95.5%) over 1665bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f1739/1749 (99.4%) over 1752bp for offset 0 <== THIS IS REAL YLL061W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL061W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2146 (0.4%). Conflicting: 9/2146 (0.4%). NoInfo: 6/2146 (0.3%). Certain keep: 2123/2146 (98.9%) ########################## YLL060C (702bp = 234AA) (tdist=21.1k) has 3 hits (GTT2) Glutathione transferase Spar (test2) orthologous hit at 85% f687/700 (98.1%) over 702bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 78% f638/654 (97.6%) over 654bp for offset 1 <== THIS IS REAL YLL060C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLL060C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2147 (0.4%). Conflicting: 9/2147 (0.4%). NoInfo: 6/2147 (0.3%). Certain keep: 2124/2147 (98.9%) ########################## YLL052C (450bp = 150AA) (tdist=35.9k) has 12 hits (AQY2) Aqy2p, putative aquapor..MIP family (104) Flanking ORFs are: YLL061W and YLL059C. YLL052C skipped ########################## YLL051C (2139bp = 713AA) (tdist=37.3k) has 24 hits (FRE6) similar to FRE2 Spar (test2) non-orthologous hit at 88% f2139/2139 (100.0%) over 2139bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f262/283 (92.6%) over 285bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 75% f1815/1843 (98.5%) over 1850bp for offset 0 <== THIS IS REAL YLL051C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL051C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2148 (0.4%). Conflicting: 9/2148 (0.4%). NoInfo: 6/2148 (0.3%). Certain keep: 2125/2148 (98.9%) ########################## YLL048C (4986bp = 1662AA) (tdist=41.2k) has 66 hits (YBT1) bile acid transporter..ABC family (94) Spar (test2) orthologous hit at 91% f1165/1165 (100.0%) over 1165bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1314/1338 (98.2%) over 1340bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1097/1105 (99.3%) over 1107bp for offset 0 <== THIS IS REAL YLL048C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL048C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2149 (0.4%). Conflicting: 9/2149 (0.4%). NoInfo: 6/2149 (0.3%). Certain keep: 2126/2149 (98.9%) ########################## YLL046C (750bp = 250AA) (tdist=46.7k) has 41 hits (RNP1) ribonucleoprotein 1 Flanking ORFs are: YLL049W and YLL047W. YLL046C skipped ########################## YLL045C (771bp = 257AA) (tdist=47.8k) has 6 hits (RPL8B) Ribosomal protein L8B (..rp6) (YL5) (96) Flanking ORFs are: YLL049W and YLL047W. YLL045C skipped ########################## YLL043W (2010bp = 670AA) (tdist=49.9k) has 340 hits (FPS1) glycerol channel protein Spar (test2) orthologous hit at 90% f1896/1912 (99.2%) over 1915bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f508/509 (99.8%) over 512bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1882/1953 (96.4%) over 1957bp for offset 0 <== THIS IS REAL YLL043W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL043W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2150 (0.4%). Conflicting: 9/2150 (0.4%). NoInfo: 6/2150 (0.3%). Certain keep: 2127/2150 (98.9%) ########################## YLL042C (504bp = 168AA) has 10 hits (APG10) involved in autophagy; protein-conju..on pathway (142) Spar (test2) orthologous hit at 86% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 58% f96/235 (40.9%) over 250bp for offset 0 Smik (test3) Longest island has f87 at 67% over 54bp Smik (test2) non-orthologous hit at 61% f64/160 (40.0%) over 164bp for offset 1 Smik (test3) Longest island has f100 at 65% over 40bp Sbay (test2) orthologous hit at 74% f499/503 (99.2%) over 504bp for offset 0 <== THIS IS REAL 0 100 200 300 400 5504 |________________|_________________|_________________|_________________|_________________|| 90f 50%87f 67% 54100f100f 69% 171f 59% 1Sm2full |....|======|ooooooooo|xxx|==>......|oo>....>| 100f100f67f 74%100f 65% 40bp Sm843full |===|o>.|===>..|xxxxxx>......> | YLL042C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLL042C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2151 (0.4%). Conflicting: 9/2151 (0.4%). NoInfo: 6/2151 (0.3%). Certain keep: 2128/2151 (98.9%) ########################## YLL041C (801bp = 267AA) has 5 hits (SDH2) Succinate dehydrogenase (ubiquinone) i..in subunit (106) Spar (test2) orthologous hit at 92% f801/801 (100.0%) over 801bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f535/535 (100.0%) over 535bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f786/797 (98.6%) over 801bp for offset 0 <== THIS IS REAL YLL041C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL041C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2152 (0.4%). Conflicting: 9/2152 (0.4%). NoInfo: 6/2152 (0.3%). Certain keep: 2129/2152 (98.9%) ########################## YLL040C (9435bp = 3145AA) has 31 hits (VPS13) component of peripheral vacuolar m..in complex (103) Spar (test2) orthologous hit at 90% f9431/9432 (100.0%) over 9435bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f3217/4198 (76.6%) over 4202bp for offset 1 Smik (test3) Longest island has f99 at 86% over 3238bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f8934/9029 (98.9%) over 9051bp for offset 1 <== THIS IS REAL 1234567891111111111222222222333333333344444444455555555556666666667777777777888888888999999k ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 99f 86% 3238bp 100f 86% 968bp Sm1111brk |==============================|ooooooooo> | YLL040C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL040C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2153 (0.4%). Conflicting: 9/2153 (0.4%). NoInfo: 6/2153 (0.3%). Certain keep: 2130/2153 (98.9%) ########################## YLL039C (1146bp = 382AA) has 74 hits (UBI4) ubiquitin Spar (test2) orthologous hit at 87% f1146/1146 (100.0%) over 1146bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f267/312 (85.6%) over 314bp for offset 0 Smik (test3) Longest island has f95 at 79% over 256bp Smik (test2) orthologous hit at 80% f269/279 (96.4%) over 283bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1137/1144 (99.4%) over 1146bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|______|_______|_______|_______|_______|___| 95f 79% 256bp Sm1113brk |....|===================| YLL039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2154 (0.4%). Conflicting: 9/2154 (0.4%). NoInfo: 6/2154 (0.3%). Certain keep: 2131/2154 (98.9%) ########################## YLL038C (744bp = 248AA) has 6 hits (ENT4) Ent4p Spar (test2) orthologous hit at 91% f744/744 (100.0%) over 744bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f744/744 (100.0%) over 744bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f735/742 (99.1%) over 744bp for offset 0 <== THIS IS REAL YLL038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2155 (0.4%). Conflicting: 9/2155 (0.4%). NoInfo: 6/2155 (0.3%). Certain keep: 2132/2155 (98.9%) ########################## YLL036C (1512bp = 504AA) has 6 hits (PRP19) RNA splicing factor Flanking ORFs are: YLL039C and YLL037W. YLL036C skipped ########################## YLL035W (1899bp = 633AA) has 9 hits (GRC3) Product of gene unknown Spar (test2) orthologous hit at 89% f1882/1891 (99.5%) over 1899bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1849/1858 (99.5%) over 1861bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1871/1891 (98.9%) over 1899bp for offset 0 <== THIS IS REAL YLL035W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL035W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2156 (0.4%). Conflicting: 9/2156 (0.4%). NoInfo: 6/2156 (0.3%). Certain keep: 2133/2156 (98.9%) ########################## YLL031C (3054bp = 1018AA) has 20 hits (GPI13) phosphoryltransferase that adds ph.. precursor (154) Spar (test2) orthologous hit at 91% f3054/3054 (100.0%) over 3054bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2089/2096 (99.7%) over 2097bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f3054/3054 (100.0%) over 3054bp for offset 0 <== THIS IS REAL YLL031C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL031C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2157 (0.4%). Conflicting: 9/2157 (0.4%). NoInfo: 6/2157 (0.3%). Certain keep: 2134/2157 (98.9%) ########################## YLL028W (1761bp = 587AA) has 12 hits (TPO1) polyamine transport protein Spar (test2) orthologous hit at 91% f1758/1760 (99.9%) over 1761bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1761/1761 (100.0%) over 1761bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1736/1758 (98.7%) over 1761bp for offset 0 <== THIS IS REAL YLL028W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL028W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2158 (0.4%). Conflicting: 9/2158 (0.4%). NoInfo: 6/2158 (0.3%). Certain keep: 2135/2158 (98.9%) ########################## YLL027W (753bp = 251AA) has 4 hits (ISA1) Iron Sulfur Assembly -- IscA/NifA homolog Spar (test2) orthologous hit at 90% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f748/752 (99.5%) over 753bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f744/748 (99.5%) over 752bp for offset 0 <== THIS IS REAL YLL027W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL027W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2159 (0.4%). Conflicting: 9/2159 (0.4%). NoInfo: 6/2159 (0.3%). Certain keep: 2136/2159 (98.9%) ########################## YLL026W (2727bp = 909AA) has 12 hits (HSP104) 104 kDa heat shock protein Spar (test2) orthologous hit at 91% f2724/2724 (100.0%) over 2727bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1199/1199 (100.0%) over 1199bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2721/2725 (99.9%) over 2726bp for offset 0 <== THIS IS REAL YLL026W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL026W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2160 (0.4%). Conflicting: 9/2160 (0.4%). NoInfo: 6/2160 (0.3%). Certain keep: 2137/2160 (98.9%) ########################## YLL024C (1920bp = 640AA) has 65 hits (SSA2) member of 70 kDa heat shock protein family Spar (test2) orthologous hit at 96% f1920/1920 (100.0%) over 1920bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f1920/1920 (100.0%) over 1920bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f1072/1072 (100.0%) over 1072bp for offset 0 <== THIS IS REAL YLL024C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL024C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2161 (0.4%). Conflicting: 9/2161 (0.4%). NoInfo: 6/2161 (0.3%). Certain keep: 2138/2161 (98.9%) ########################## YLL022C (1158bp = 386AA) has 29 hits (HIF1) interacts with histone acetyltransferase Spar (test2) orthologous hit at 86% f1158/1158 (100.0%) over 1158bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f908/1047 (86.7%) over 1065bp for offset 2 Smik (test3) Longest island has f94 at 75% over 622bp <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1024/1142 (89.7%) over 1157bp for offset 0 Sbay (test3) Longest island has f95 at 72% over 794bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|______|_______|_______|_______|______|_______|_______|____| 94f 77% 313bp 94f 75% 622bp Sm1120brk |=======================>....|===============================================>.....> | 98f 79% 258bp 95f 72% 794bp Sb530full |..|xxxxxxxxxxxxxxxxxxx>.....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YLL022C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL022C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2162 (0.4%). Conflicting: 9/2162 (0.4%). NoInfo: 6/2162 (0.3%). Certain keep: 2139/2162 (98.9%) ########################## YLL021W (4401bp = 1467AA) has 302 hits (SPA2) spindle pole antigen Spar (test2) orthologous hit at 82% f3360/3490 (96.3%) over 3503bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1139/1287 (88.5%) over 1301bp for offset 0 Smik (test3) Longest island has f98 at 81% over 1118bp <== THIS IS REAL Sbay (test2) orthologous hit at 66% f1417/1775 (79.8%) over 1812bp for offset 0 Sbay (test3) Longest island has f94 at 75% over 1180bp <== THIS IS REAL 0 1020304050607080901k1k1k1k1k1k1k1k1k1k2k2k2k 2k2k2k2k2k2k2k3k3k3k3k3k3k3k3k3k3k4k4k4k4k44k |_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|| 98f 81% 1118bp Sm1120brk ||======================>..> | 94f 75% 1180bp Sb530full |=======================>............> | YLL021W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL021W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2163 (0.4%). Conflicting: 9/2163 (0.4%). NoInfo: 6/2163 (0.3%). Certain keep: 2140/2163 (98.9%) ########################## YLL019C (2214bp = 738AA) has 28 hits (KNS1) protein kinase homolog Flanking ORFs are: YLL022C and YLL020C. YLL019C skipped ########################## YLL018C-A (297bp = 99AA) has 4 hits (COX19) Cox19p (under characterization) Spar (test2) orthologous hit at 89% f283/283 (100.0%) over 283bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f280/292 (95.9%) over 293bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f259/259 (100.0%) over 259bp for offset 0 <== THIS IS REAL YLL018C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL018C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2164 (0.4%). Conflicting: 9/2164 (0.4%). NoInfo: 6/2164 (0.3%). Certain keep: 2141/2164 (98.9%) ########################## YLL018C (1674bp = 558AA) has 19 hits (DPS1) Aspartyl-tRNA synthetase, cytosolic Spar (test2) orthologous hit at 93% f1674/1674 (100.0%) over 1674bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 90% f1339/1367 (98.0%) over 1369bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1674/1674 (100.0%) over 1674bp for offset 0 <== THIS IS REAL YLL018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2165 (0.4%). Conflicting: 9/2165 (0.4%). NoInfo: 6/2165 (0.3%). Certain keep: 2142/2165 (98.9%) ########################## YLL017W (312bp = 104AA) has 4 hits (SDC25) Spar (test2) orthologous hit at 85% f266/300 (88.7%) over 304bp for offset 2 Spar (test3) Longest island has f99 at 87% over 269bp <== THIS IS REAL Smik (test2) non-orthologous hit at 77% f275/296 (92.9%) over 302bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f261/291 (89.7%) over 299bp for offset 0 Sbay (test3) Longest island has f95 at 72% over 274bp <== THIS IS REAL 0 100 200 300 312 |___________________________|____________________________|____________________________|___| 99f 87% 269bp Sp53full |============================================================================>.........> | 95f 72% 274bp Sb530full |==============================================================================>......> | YLL017W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL017W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2166 (0.4%). Conflicting: 9/2166 (0.4%). NoInfo: 6/2166 (0.3%). Certain keep: 2143/2166 (98.9%) ########################## YLL016W (3147bp = 1049AA) has 21 hits (SDC25) GDP/GTP exchange factor for Ras Spar (test2) non-orthologous hit at 86% f3131/3145 (99.6%) over 3147bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 79% f1056/1069 (98.8%) over 1072bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f3057/3127 (97.8%) over 3143bp for offset 0 <== THIS IS REAL YLL016W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL016W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2167 (0.4%). Conflicting: 9/2167 (0.4%). NoInfo: 6/2167 (0.3%). Certain keep: 2144/2167 (98.9%) ########################## YLL015W (4680bp = 1560AA) has 67 hits (BPT1) ABC-type transmembrane transporter;..gans mrp-1 (136) Spar (test2) orthologous hit at 90% f4291/4315 (99.4%) over 4317bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1540/1554 (99.1%) over 1556bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f4565/4615 (98.9%) over 4623bp for offset 0 <== THIS IS REAL YLL015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2168 (0.4%). Conflicting: 9/2168 (0.4%). NoInfo: 6/2168 (0.3%). Certain keep: 2145/2168 (98.9%) ########################## YLL013C (2640bp = 880AA) has 511 hits (PUF3) Spar (test2) orthologous hit at 83% f1339/1434 (93.4%) over 1449bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2519/2622 (96.1%) over 2640bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1143/1150 (99.4%) over 1152bp for offset 0 <== THIS IS REAL YLL013C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL013C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2169 (0.4%). Conflicting: 9/2169 (0.4%). NoInfo: 6/2169 (0.3%). Certain keep: 2146/2169 (98.9%) ########################## YLL011W (1470bp = 490AA) has 27 hits (SOF1) 56 kDa nucleolar snRNP protein that ..actor Prp4 (154) Spar (test2) orthologous hit at 92% f1470/1470 (100.0%) over 1470bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1469/1469 (100.0%) over 1469bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 85% f1055/1055 (100.0%) over 1055bp for offset 0 <== THIS IS REAL YLL011W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL011W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2170 (0.4%). Conflicting: 9/2170 (0.4%). NoInfo: 6/2170 (0.3%). Certain keep: 2147/2170 (98.9%) ########################## YLL010C (1284bp = 428AA) has 295 hits (PSR1) Plasma membrane Sodium Response 1 Spar (test2) orthologous hit at 89% f774/805 (96.1%) over 806bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 87% f656/656 (100.0%) over 656bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 55% f225/538 (41.8%) over 571bp for offset 2 Sbay (test3) Longest island has f95 at 69% over 83bp Sbay (test2) non-orthologous hit at 54% f290/534 (54.3%) over 561bp for offset 0 Sbay (test3) Longest island has f92 at 65% over 121bp Sbay (test2) non-orthologous hit at 55% f210/480 (43.8%) over 508bp for offset 1 Sbay (test3) Longest island has f76 at 65% over 95bp Sbay (test2) non-orthologous hit at 54% f235/487 (48.3%) over 508bp for offset 2 Sbay (test3) Longest island has f90 at 61% over 136bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|______|______|______|______|______|______|______|______|______|_____| 95f 69% 84f 49%100f 55% 100f 40% 30bp Sb609full |...|=====>.|oo>...|o>......|o>.........> | 81f 59100f 5285f 53% 40bp 92f 65% 121b76f 63% 41bp Sb762full |===>.|oo>...|==>.........|=======>...|==> | 82f 685f86f 58% 43b75f 55%76f 65% 95bp Sb128full |==>.|oo|xx>.......|ooo>..|oooooo>.> | 100f 5581f 7479f 52% 42b90f 61% 136bp Sb703full |..|x>....|x>.|>|oo>.......|xxxxxxxxx> | YLL010C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLL010C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2171 (0.4%). Conflicting: 9/2171 (0.4%). NoInfo: 6/2171 (0.3%). Certain keep: 2148/2171 (98.9%) ########################## YLL009C (210bp = 70AA) has 25 hits (COX17) cysteine-rich cytoplasmic protein Spar (test2) orthologous hit at 91% f209/209 (100.0%) over 209bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f210/210 (100.0%) over 210bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 57% f83/187 (44.4%) over 197bp for offset 1 Sbay (test3) Longest island has f74 at 57% over 104bp Sbay (test2) non-orthologous hit at 57% f71/180 (39.4%) over 190bp for offset 2 Sbay (test3) Longest island has f76 at 60% over 67bp Sbay (test2) non-orthologous hit at 58% f83/123 (67.5%) over 129bp for offset 0 Sbay (test3) Longest island has f84 at 53% over 93bp Sbay (test2) non-orthologous hit at 68% f31/76 (40.8%) over 82bp for offset 0 Sbay (test3) Longest island has f72 at 64% over 36bp 0 100 200 210 |_________________________________________|__________________________________________|____| 74f 57% 104bp 100f 42%81f 62% 74bp Sb254full |..|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>|ooooooo|=============================|=> 100f 85% 20bp 100f 60% 276f 60% 67bp 100f 62% 2Sb535full |.....|xxxxxxxx>......................|=======>.|xxxxxxxxxxxxxxxxxxxxxxxxxxx>|ooooooo> | 84f 53% 93bp 100f 1100f 54% Sb596full |=======================================>|xxxxx|ooooo>.>| 89f 77% 35bp 72f 64% 36bp Sb712full |==============>...|oooooooooooooo> | YLL009C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLL009C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2172 (0.4%). Conflicting: 9/2172 (0.4%). NoInfo: 6/2172 (0.3%). Certain keep: 2149/2172 (98.9%) ########################## YLL008W (2259bp = 753AA) has 707 hits (DRS1) putative ATP dependent RNA helicase Spar (test2) orthologous hit at 84% f1952/2124 (91.9%) over 2143bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f274/284 (96.5%) over 292bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 86% f1585/1588 (99.8%) over 1589bp for offset 0 <== THIS IS REAL YLL008W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL008W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2173 (0.4%). Conflicting: 9/2173 (0.4%). NoInfo: 6/2173 (0.3%). Certain keep: 2150/2173 (98.9%) ########################## YLL006W (1281bp = 427AA) has 5 hits (MMM1) mitochondrial outer membrane protein Spar (test2) orthologous hit at 90% f1281/1281 (100.0%) over 1281bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f664/1036 (64.1%) over 1040bp for offset 0 Smik (test3) Longest island has f100 at 86% over 661bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1274/1280 (99.5%) over 1281bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|______|______|______|______|______|______|______|______|______|_____| 100f 86% 661bp 97f 86% 381bp Sm1387brk ||=============================================|xxxxxxxxxxxxxxxxxxxxxxxxxx| YLL006W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL006W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2174 (0.4%). Conflicting: 9/2174 (0.4%). NoInfo: 6/2174 (0.3%). Certain keep: 2151/2174 (98.9%) ########################## YLL005C (2607bp = 869AA) has 57 hits (SPO75) Hypothetical ORF Spar (test2) orthologous hit at 89% f2601/2606 (99.8%) over 2607bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1078/1082 (99.6%) over 1083bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2525/2590 (97.5%) over 2602bp for offset 0 <== THIS IS REAL YLL005C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL005C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2175 (0.4%). Conflicting: 9/2175 (0.4%). NoInfo: 6/2175 (0.3%). Certain keep: 2152/2175 (98.9%) ########################## YLL004W (1851bp = 617AA) has 28 hits (ORC3) Third subunit of the origin recognit..on complex (91) Spar (test2) orthologous hit at 91% f1851/1851 (100.0%) over 1851bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 54% f174/484 (36.0%) over 510bp for offset 2 Smik (test3) Longest island has f80 at 57% over 54bp Smik (test2) non-orthologous hit at 57% f198/407 (48.6%) over 435bp for offset 2 Smik (test3) Longest island has f76 at 59% over 74bp Smik (test2) non-orthologous hit at 85% f287/287 (100.0%) over 287bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1832/1848 (99.1%) over 1850bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|____|____|____|___|____|____|____|____|____|____|___|____|____|____|__| 80f82f 579f7978f 81f 52% 42bp Sm1055ful |.|=>|x>..|x>|x|o>.|=>...> | 7178f7176f 564f 100f 57% 21bp Sm132full |.|>|o>|o|==>.|=>.|>.> | YLL004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2176 (0.4%). Conflicting: 9/2176 (0.4%). NoInfo: 6/2176 (0.3%). Certain keep: 2153/2176 (98.9%) ########################## YLL003W (2841bp = 947AA) has 22 hits (SFI1) Product of gene unknown Spar (test2) orthologous hit at 86% f2834/2840 (99.8%) over 2841bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f428/428 (100.0%) over 428bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2490/2830 (88.0%) over 2841bp for offset 1 Sbay (test3) Longest island has f98 at 77% over 1693bp <== THIS IS REAL 0 100200300400500 6007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k2k |__|__|__|__|__|___|__|__|__|__|__|___|__|__|__|__|__|___|__|__|__|__|__|___|__|__|__|__|_| 100f 76%97f 76% 863bp 98f 77% 1693bp Sb423full |=======|ooooooooooooooooooooooooooo|ooooooooooooooooooooooooooooooooooooooooooooooooooooo| YLL003W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL003W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2177 (0.4%). Conflicting: 9/2177 (0.4%). NoInfo: 6/2177 (0.3%). Certain keep: 2154/2177 (98.9%) ########################## YLL002W (1311bp = 437AA) has 7 hits (RTT109) diepoxybutane and mitomycin C resistance Spar (test2) orthologous hit at 88% f1309/1309 (100.0%) over 1309bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f626/631 (99.2%) over 632bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1277/1292 (98.8%) over 1296bp for offset 0 <== THIS IS REAL YLL002W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL002W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2178 (0.4%). Conflicting: 9/2178 (0.4%). NoInfo: 6/2178 (0.3%). Certain keep: 2155/2178 (98.9%) ########################## YLL001W (2274bp = 758AA) has 22 hits (DNM1) Dynamin-related protein Spar (test2) orthologous hit at 92% f2274/2274 (100.0%) over 2274bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1233/1236 (99.8%) over 1237bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f2271/2274 (99.9%) over 2274bp for offset 0 <== THIS IS REAL YLL001W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLL001W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2179 (0.4%). Conflicting: 9/2179 (0.4%). NoInfo: 6/2179 (0.3%). Certain keep: 2156/2179 (98.9%) ########################## YLR002C (1992bp = 664AA) has 65 hits (NOC3) Spar (test2) orthologous hit at 91% f1992/1992 (100.0%) over 1992bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1984/1989 (99.7%) over 1992bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1713/1752 (97.8%) over 1759bp for offset 0 <== THIS IS REAL YLR002C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR002C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2180 (0.4%). Conflicting: 9/2180 (0.4%). NoInfo: 6/2180 (0.3%). Certain keep: 2157/2180 (98.9%) ########################## YLR005W (1386bp = 462AA) has 12 hits (SSL1) Component of RNA polymerase transcri..ctor TFIIH (98) Spar (test2) orthologous hit at 92% f1378/1380 (99.9%) over 1386bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1297/1302 (99.6%) over 1307bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1255/1255 (100.0%) over 1255bp for offset 0 <== THIS IS REAL YLR005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2181 (0.4%). Conflicting: 9/2181 (0.4%). NoInfo: 6/2181 (0.3%). Certain keep: 2158/2181 (98.9%) ########################## YLR006C (2139bp = 713AA) has 8 hits (SSK1) Two-component signal transducer that ..or kinase) (160) Spar (test2) orthologous hit at 89% f2135/2138 (99.9%) over 2139bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1260/1268 (99.4%) over 1272bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f819/842 (97.3%) over 850bp for offset 1 <== THIS IS REAL YLR006C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR006C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2182 (0.4%). Conflicting: 9/2182 (0.4%). NoInfo: 6/2182 (0.3%). Certain keep: 2159/2182 (98.9%) ########################## YLR009W (600bp = 200AA) has 275 hits (RLP24) Ribosomal Like Protein 24 Spar (test2) orthologous hit at 94% f600/600 (100.0%) over 600bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f289/289 (100.0%) over 289bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f595/599 (99.3%) over 600bp for offset 0 <== THIS IS REAL YLR009W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR009W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2183 (0.4%). Conflicting: 9/2183 (0.4%). NoInfo: 6/2183 (0.3%). Certain keep: 2160/2183 (98.9%) ########################## YLR010C (483bp = 161AA) has 6 hits (TEN1) Protein required for cell viability Spar (test2) orthologous hit at 86% f483/483 (100.0%) over 483bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f480/482 (99.6%) over 483bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f461/475 (97.1%) over 482bp for offset 0 <== THIS IS REAL YLR010C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR010C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2184 (0.4%). Conflicting: 9/2184 (0.4%). NoInfo: 6/2184 (0.3%). Certain keep: 2161/2184 (98.9%) ########################## YLR011W (576bp = 192AA) has 5 hits (LOT6) Spar (test2) orthologous hit at 86% f572/572 (100.0%) over 572bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 71% f200/237 (84.4%) over 240bp for offset 2 Smik (test3) Longest island has f92 at 72% over 217bp Sbay (test2) orthologous hit at 73% f528/570 (92.6%) over 575bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 576 |______________|_______________|______________|_______________|_______________|___________| 100f92f 72% 217bp Sm347full |===|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | YLR011W: kill: Smik - keep: Spar Sbay YLR011W - Conflicting. Kill (Smik) and Keep (Spar Sbay) Current total: Certain kills: 8/2185 (0.4%). Conflicting: 10/2185 (0.5%). NoInfo: 6/2185 (0.3%). Certain keep: 2161/2185 (98.9%) ########################## YLR013W (426bp = 142AA) has 13 hits (GAT3) The amino acid sequence of this ORF i..4/YIR013C. (122) Spar (test2) orthologous hit at 85% f420/420 (100.0%) over 426bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f413/422 (97.9%) over 426bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f407/419 (97.1%) over 421bp for offset 0 <== THIS IS REAL YLR013W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR013W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2186 (0.4%). Conflicting: 10/2186 (0.5%). NoInfo: 6/2186 (0.3%). Certain keep: 2162/2186 (98.9%) ########################## YLR014C (2715bp = 905AA) has 9 hits (PPR1) zinc-finger transcription factor of t..omain type (125) Spar (test2) orthologous hit at 88% f2715/2715 (100.0%) over 2715bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2032/2036 (99.8%) over 2037bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f2615/2708 (96.6%) over 2713bp for offset 0 <== THIS IS REAL YLR014C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR014C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2187 (0.4%). Conflicting: 10/2187 (0.5%). NoInfo: 6/2187 (0.3%). Certain keep: 2163/2187 (98.9%) ########################## YLR015W (1518bp = 506AA) has 17 hits (BRE2) putative transcription factor, conta..inger moti (101) Spar (test2) orthologous hit at 88% f1518/1518 (100.0%) over 1518bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1518/1518 (100.0%) over 1518bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f771/776 (99.4%) over 777bp for offset 0 <== THIS IS REAL YLR015W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR015W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2188 (0.4%). Conflicting: 10/2188 (0.5%). NoInfo: 6/2188 (0.3%). Certain keep: 2164/2188 (98.9%) ########################## YLR017W (1014bp = 338AA) has 4 hits (MEU1) regulator of ADH2 expression Spar (test2) orthologous hit at 91% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1014/1014 (100.0%) over 1014bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1013/1013 (100.0%) over 1013bp for offset 0 <== THIS IS REAL YLR017W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR017W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2189 (0.4%). Conflicting: 10/2189 (0.5%). NoInfo: 6/2189 (0.3%). Certain keep: 2165/2189 (98.9%) ########################## YLR018C (900bp = 300AA) has 5 hits (POM34) nuclear pore integral membrane protein Spar (test2) orthologous hit at 88% f893/898 (99.4%) over 900bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f880/897 (98.1%) over 900bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f728/793 (91.8%) over 802bp for offset 0 <== THIS IS REAL YLR018C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR018C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2190 (0.4%). Conflicting: 10/2190 (0.5%). NoInfo: 6/2190 (0.3%). Certain keep: 2166/2190 (98.9%) ########################## YLR019W (1194bp = 398AA) has 199 hits (PSR2) Plasma membrane Sodium Response 2 Spar (test2) orthologous hit at 89% f1185/1188 (99.7%) over 1194bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f467/475 (98.3%) over 488bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 52% f441/1001 (44.1%) over 1044bp for offset 0 Sbay (test3) Longest island has f100 at 49% over 99bp Sbay (test2) non-orthologous hit at 57% f192/374 (51.3%) over 394bp for offset 1 Sbay (test3) Longest island has f81 at 66% over 90bp Sbay (test2) non-orthologous hit at 54% f148/386 (38.3%) over 404bp for offset 0 Sbay (test3) Longest island has f77 at 62% over 81bp Sbay (test2) non-orthologous hit at 55% f161/360 (44.7%) over 379bp for offset 2 Sbay (test3) Longest island has f85 at 72% over 54bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|______|_______|______|_______|______|_______|______|_______|______|_______| 75f 50%92f 61%100f 49% 99b84f 45% 55bp 75f 73f 55% 51bp Sb349full |..............|xx>...|====>.|======>....|===>..................|ooo|===>.....> | 81f 66% 76f 52% 54b69f 100f 59% 41bp Sb530full |..|ooooo>.|ooo>......|o>.|==> | 77f 6284f 79f 45% 47bp81f 5188f 72% 50bp Sb322full |=====|ooo|xxx>.......|xx>..|ooo> | 100f100f 45%85f 72% 5485f 76f 65% 34bp Sb713brk |=>.|x>.....|xxx>.....|x>.|==> | YLR019W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR019W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2191 (0.4%). Conflicting: 10/2191 (0.5%). NoInfo: 6/2191 (0.3%). Certain keep: 2167/2191 (98.9%) ########################## YLR024C (5619bp = 1873AA) has 76 hits (UBR2) ubiquitin-protein ligase (E3) Spar (test2) orthologous hit at 87% f4996/5132 (97.3%) over 5147bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f294/294 (100.0%) over 294bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f3855/4266 (90.4%) over 4273bp for offset 1 <== THIS IS REAL YLR024C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR024C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2192 (0.4%). Conflicting: 10/2192 (0.5%). NoInfo: 6/2192 (0.3%). Certain keep: 2168/2192 (98.9%) ########################## YLR025W (723bp = 241AA) has 122 hits (SNF7) involved in glucose derepression Spar (test2) orthologous hit at 91% f723/723 (100.0%) over 723bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f222/222 (100.0%) over 222bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f714/721 (99.0%) over 723bp for offset 0 <== THIS IS REAL YLR025W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR025W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2193 (0.4%). Conflicting: 10/2193 (0.5%). NoInfo: 6/2193 (0.3%). Certain keep: 2169/2193 (98.9%) ########################## YLR026C (1023bp = 341AA) has 7 hits (SED5) Sed5p is a t-SNARE (soluble NSF attac..transport. (138) Spar (test2) orthologous hit at 90% f1023/1023 (100.0%) over 1023bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f999/1005 (99.4%) over 1006bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1022/1022 (100.0%) over 1022bp for offset 0 <== THIS IS REAL YLR026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2194 (0.4%). Conflicting: 10/2194 (0.5%). NoInfo: 6/2194 (0.3%). Certain keep: 2170/2194 (98.9%) ########################## YLR027C (1299bp = 433AA) has 7 hits (AAT2) aspartate aminotransferase, cytosolic Spar (test2) orthologous hit at 90% f1299/1299 (100.0%) over 1299bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1288/1288 (100.0%) over 1288bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1263/1295 (97.5%) over 1296bp for offset 0 <== THIS IS REAL YLR027C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR027C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2195 (0.4%). Conflicting: 10/2195 (0.5%). NoInfo: 6/2195 (0.3%). Certain keep: 2171/2195 (98.9%) ########################## YLR028C (1776bp = 592AA) has 10 hits (ADE16) 5-aminoimidazole-4-carboxamide ribo..ohydrolase (132) Spar (test2) orthologous hit at 91% f1775/1775 (100.0%) over 1775bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1410/1700 (82.9%) over 1700bp for offset 2 Smik (test3) Longest island has f100 at 88% over 1410bp <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1766/1773 (99.6%) over 1775bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|____|____|____|____|____|_____|____|____|___| 100f 88% 1410bp 100f 86% 285bp Sm757brk |======================================================================|xxxxxxxxxxxxxx> | YLR028C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR028C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2196 (0.4%). Conflicting: 10/2196 (0.5%). NoInfo: 6/2196 (0.3%). Certain keep: 2172/2196 (98.9%) ########################## YLR029C (615bp = 205AA) has 12 hits (RPL15A) Ribosomal protein L15A (YL10) (rp15R) (L13A) Spar (test2) orthologous hit at 98% f615/615 (100.0%) over 615bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f612/612 (100.0%) over 612bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 97% f615/615 (100.0%) over 615bp for offset 0 <== THIS IS REAL YLR029C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR029C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2197 (0.4%). Conflicting: 10/2197 (0.5%). NoInfo: 6/2197 (0.3%). Certain keep: 2173/2197 (98.9%) ########################## YLR032W (3510bp = 1170AA) has 48 hits (RAD5) putative ATPase/DNA helicase Spar (test2) orthologous hit at 90% f1787/1797 (99.4%) over 1797bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 71% f404/513 (78.8%) over 530bp for offset 1 Smik (test3) Longest island has f90 at 72% over 426bp Smik (test2) orthologous hit at 76% f139/165 (84.2%) over 167bp for offset 0 Smik (test3) Longest island has f94 at 80% over 145bp Sbay (test2) orthologous hit at 81% f1754/1773 (98.9%) over 1781bp for offset 0 <== THIS IS REAL 0 100203004050060700800901k 1k1k 1k1k 1k 1k1k 1k1k 2k2k 2k2k 2k 2k2k 2k2k 2k3k 3k 3k3k 3k33k |_|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|__|_|__|_|__|__|_|__|_|__|_|__|__|_|__|_|| 90f 72% 426bp Sm759brk |.|oooooooooo>> | 94f 100f 64% 11bp Sm759brk |==>| | YLR032W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR032W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2198 (0.4%). Conflicting: 10/2198 (0.5%). NoInfo: 6/2198 (0.3%). Certain keep: 2174/2198 (98.9%) ########################## YLR033W (1509bp = 503AA) has 47 hits (RSC58) Chromatin Remodeling Complex subunit Spar (test2) orthologous hit at 86% f1158/1217 (95.2%) over 1222bp for offset 1 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f665/755 (88.1%) over 763bp for offset 2 Smik (test3) Longest island has f97 at 84% over 688bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1450/1495 (97.0%) over 1509bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 11k |____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|| 97f 84% 688bp Sm684brk |..|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.> | YLR033W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR033W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2199 (0.4%). Conflicting: 10/2199 (0.5%). NoInfo: 6/2199 (0.3%). Certain keep: 2175/2199 (98.9%) ########################## YLR034C (1422bp = 474AA) has 18 hits (SMF3) Putative metal transporter, Nramp ho..1 and SMF2 (111) Spar (test2) orthologous hit at 90% f1416/1420 (99.7%) over 1421bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f248/248 (100.0%) over 248bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1418/1421 (99.8%) over 1422bp for offset 0 <== THIS IS REAL YLR034C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR034C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2200 (0.4%). Conflicting: 10/2200 (0.5%). NoInfo: 6/2200 (0.3%). Certain keep: 2176/2200 (98.9%) ########################## YLR035C (2088bp = 696AA) has 10 hits (MLH2) MutL Homolog Spar (test2) orthologous hit at 88% f2084/2085 (100.0%) over 2088bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f896/918 (97.6%) over 923bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f1986/2073 (95.8%) over 2088bp for offset 0 <== THIS IS REAL YLR035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2201 (0.4%). Conflicting: 10/2201 (0.5%). NoInfo: 6/2201 (0.3%). Certain keep: 2177/2201 (98.9%) ########################## YLR037C (375bp = 125AA) has 127 hits (DAN2) Spar (test2) orthologous hit at 90% f375/375 (100.0%) over 375bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f165/218 (75.7%) over 222bp for offset 1 Smik (test3) Longest island has f95 at 75% over 166bp Sbay (test2) orthologous hit at 89% f374/374 (100.0%) over 374bp for offset 0 <== THIS IS REAL 0 100 200 300 375 |_______________________|_______________________|_______________________|_________________| 88f 72% 43b95f 75% 166bp Sm680brk |...|xxxxxxxxx>|oooooooooooooooooooooooooooooooooooooo| YLR037C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR037C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2202 (0.4%). Conflicting: 10/2202 (0.5%). NoInfo: 6/2202 (0.3%). Certain keep: 2178/2202 (98.9%) ########################## YLR038C (252bp = 84AA) has 8 hits (COX12) subunit VIb of cytochrome c oxidase Spar (test2) orthologous hit at 92% f252/252 (100.0%) over 252bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 60% f69/147 (46.9%) over 154bp for offset 2 Smik (test3) Longest island has f65 at 63% over 40bp Smik (test2) non-orthologous hit at 83% f71/111 (64.0%) over 111bp for offset 2 Smik (test3) Longest island has f100 at 89% over 71bp Smik (test2) non-orthologous hit at 95% f46/46 (100.0%) over 46bp for offset 0 Smik (test3) Longest island has f100 at 96% over 46bp Sbay (test2) orthologous hit at 87% f252/252 (100.0%) over 252bp for offset 0 <== THIS IS REAL 0 100 200 252 |__________________________________|___________________________________|__________________| 65f 63% 40bp 100f 75% 32b100f 57% 14bp100f 55% 29bp Sm911full |.......|xxxxxxxxxxxxx>|==========>|xxx>........|xxxxxxxxx> | 100f 77% 39bp 100f 89% 71bp Sm1317brk ||============>.|xxxxxxxxxxxxxxxxxxxxxxx|> 100f 96% 46bp Sm679brk |===============> | YLR038C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR038C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2203 (0.4%). Conflicting: 10/2203 (0.5%). NoInfo: 6/2203 (0.3%). Certain keep: 2179/2203 (98.9%) ########################## YLR039C (3171bp = 1057AA) has 38 hits (RIC1) involved in transcription of riboso..osomal RNA (115) Spar (test2) orthologous hit at 89% f3104/3161 (98.2%) over 3164bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f432/508 (85.0%) over 509bp for offset 0 Smik (test3) Longest island has f100 at 82% over 400bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f3048/3139 (97.1%) over 3152bp for offset 0 <== THIS IS REAL 0 100200300400500607008009001k 1k 1k1k 1k 1k 1k 1k 1k1k 2k 2k 2k 2k 2k2k 2k 2k 2k 2k 3k3k 3k |_|__|__|__|__|__|_|__|__|__|__|__|_|__|__|__|__|__|_|__|__|__|__|__|_|__|__|__|__|__|_|__| 100f 82% 400bp Sm678brk |..|==========> | YLR039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2204 (0.4%). Conflicting: 10/2204 (0.5%). NoInfo: 6/2204 (0.3%). Certain keep: 2180/2204 (98.9%) ########################## YLR043C (312bp = 104AA) has 18 hits (TRX1) thioredoxin Spar (test2) orthologous hit at 95% f312/312 (100.0%) over 312bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f191/235 (81.3%) over 239bp for offset 2 Smik (test3) Longest island has f100 at 90% over 185bp Sbay (test2) orthologous hit at 88% f312/312 (100.0%) over 312bp for offset 0 <== THIS IS REAL 0 100 200 300 312 |___________________________|____________________________|____________________________|___| 100f 91% 100100100f 90% 185bp Sm678brk |=====>..|oo|==|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YLR043C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR043C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2205 (0.4%). Conflicting: 10/2205 (0.5%). NoInfo: 6/2205 (0.3%). Certain keep: 2181/2205 (98.9%) ########################## YLR044C (1692bp = 564AA) has 15 hits (PDC1) pyruvate decarboxylase Spar (test2) orthologous hit at 98% f1692/1692 (100.0%) over 1692bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 95% f970/970 (100.0%) over 970bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f1692/1692 (100.0%) over 1692bp for offset 0 <== THIS IS REAL YLR044C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR044C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2206 (0.4%). Conflicting: 10/2206 (0.5%). NoInfo: 6/2206 (0.3%). Certain keep: 2182/2206 (98.9%) ########################## YLR045C (2667bp = 889AA) has 41 hits (STU2) spindle pole body component Spar (test2) orthologous hit at 90% f2606/2613 (99.7%) over 2614bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1604/1604 (100.0%) over 1604bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2634/2660 (99.0%) over 2666bp for offset 0 <== THIS IS REAL YLR045C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR045C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2207 (0.4%). Conflicting: 10/2207 (0.5%). NoInfo: 6/2207 (0.3%). Certain keep: 2183/2207 (98.9%) ########################## YLR052W (753bp = 251AA) has 12 hits (IES3) Hypothetical ORF Spar (test2) orthologous hit at 91% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f752/752 (100.0%) over 752bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f752/753 (99.9%) over 753bp for offset 0 <== THIS IS REAL YLR052W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR052W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2208 (0.4%). Conflicting: 10/2208 (0.5%). NoInfo: 6/2208 (0.3%). Certain keep: 2184/2208 (98.9%) ########################## YLR055C (1809bp = 603AA) has 505 hits (SPT8) transcription factor, probable memb..GA complex (124) Spar (test2) orthologous hit at 85% f1655/1706 (97.0%) over 1715bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f832/832 (100.0%) over 832bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1650/1751 (94.2%) over 1767bp for offset 0 <== THIS IS REAL YLR055C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR055C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2209 (0.4%). Conflicting: 10/2209 (0.5%). NoInfo: 6/2209 (0.3%). Certain keep: 2185/2209 (98.9%) ########################## YLR056W (1098bp = 366AA) has 6 hits (ERG3) C-5 sterol desaturase Spar (test2) orthologous hit at 92% f1098/1098 (100.0%) over 1098bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f768/768 (100.0%) over 768bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1098/1098 (100.0%) over 1098bp for offset 0 <== THIS IS REAL YLR056W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR056W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2210 (0.4%). Conflicting: 10/2210 (0.5%). NoInfo: 6/2210 (0.3%). Certain keep: 2186/2210 (98.9%) ########################## YLR058C (1410bp = 470AA) has 8 hits (SHM2) serine hydroxymethyltransferase Spar (test2) orthologous hit at 95% f1410/1410 (100.0%) over 1410bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 93% f1410/1410 (100.0%) over 1410bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f1410/1410 (100.0%) over 1410bp for offset 0 <== THIS IS REAL YLR058C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR058C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2211 (0.4%). Conflicting: 10/2211 (0.5%). NoInfo: 6/2211 (0.3%). Certain keep: 2187/2211 (98.9%) ########################## YLR059C (810bp = 270AA) has 4 hits (REX2) RNA exonuclease Spar (test2) orthologous hit at 90% f805/809 (99.5%) over 810bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f804/809 (99.4%) over 810bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f789/808 (97.6%) over 810bp for offset 0 <== THIS IS REAL YLR059C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR059C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2212 (0.4%). Conflicting: 10/2212 (0.5%). NoInfo: 6/2212 (0.3%). Certain keep: 2188/2212 (98.9%) ########################## YLR060W (1788bp = 596AA) has 4 hits (FRS1) Phenylalanyl-tRNA synthetase, alpha s..ytoplasmic (99) Spar (test2) orthologous hit at 93% f1780/1787 (99.6%) over 1788bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1788/1788 (100.0%) over 1788bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1784/1787 (99.8%) over 1788bp for offset 0 <== THIS IS REAL YLR060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2213 (0.4%). Conflicting: 10/2213 (0.5%). NoInfo: 6/2213 (0.3%). Certain keep: 2189/2213 (98.9%) ########################## YLR062C (378bp = 126AA) has 21 hits (BUD28) Flanking ORFs are: YLR059C and YLR061W. YLR062C skipped ########################## YLR066W (555bp = 185AA) has 11 hits (SPC3) signal peptidase subunit Spar (test2) orthologous hit at 90% f554/554 (100.0%) over 554bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f243/313 (77.6%) over 313bp for offset 0 Smik (test3) Longest island has f100 at 85% over 243bp Smik (test2) non-orthologous hit at 55% f161/327 (49.2%) over 344bp for offset 0 Smik (test3) Longest island has f68 at 56% over 62bp Smik (test2) non-orthologous hit at 59% f69/189 (36.5%) over 198bp for offset 2 Smik (test3) Longest island has f80 at 52% over 71bp Sbay (test2) orthologous hit at 81% f553/553 (100.0%) over 553bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 555 |_______________|_______________|_______________|_______________|________________|________| 100f 85% 243bp Sm669brk |..........|ooooooooooooooooooooooooooooooooooooooo| 68f 56% 62bp 71f 59% 34bp 89f 52% 56bp 90f 55% 58bp Sm741full |..|xxxxxxxxx>....|xxxx>...........|========>....|========> | 85f 69%80f 52% 71bp 100f 100f 84% 19bp Sm745full |====>.|xxxxxxxxxxx>|oooo|==>...> | YLR066W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR066W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2214 (0.4%). Conflicting: 10/2214 (0.5%). NoInfo: 6/2214 (0.3%). Certain keep: 2190/2214 (98.9%) ########################## YLR067C (2898bp = 966AA) has 21 hits (PET309) involved in COX1 mRNA stability Spar (test2) orthologous hit at 89% f2895/2897 (99.9%) over 2898bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f928/1014 (91.5%) over 1016bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2862/2892 (99.0%) over 2897bp for offset 0 <== THIS IS REAL YLR067C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR067C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2215 (0.4%). Conflicting: 10/2215 (0.5%). NoInfo: 6/2215 (0.3%). Certain keep: 2191/2215 (98.9%) ########################## YLR068W (456bp = 152AA) has 116 hits (FYV7) Hypothetical ORF Spar (test2) orthologous hit at 89% f454/454 (100.0%) over 454bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f329/451 (72.9%) over 454bp for offset 0 Smik (test3) Longest island has f98 at 83% over 316bp <== THIS IS REAL Sbay (test2) orthologous hit at 82% f121/134 (90.3%) over 136bp for offset 0 Sbay (test3) Longest island has f88 at 83% over 138bp 0 100 200 300 400 456 |__________________|___________________|___________________|__________________|___________| 98f 83% 316bp Sm1536ful |...........................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 88f 83% 138bp Sb124brk ||==========================| YLR068W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR068W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2216 (0.4%). Conflicting: 10/2216 (0.5%). NoInfo: 6/2216 (0.3%). Certain keep: 2192/2216 (98.9%) ########################## YLR069C (2286bp = 762AA) has 20 hits (MEF1) mitochondrial elongation factor G-like protein Spar (test2) orthologous hit at 92% f2286/2286 (100.0%) over 2286bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f878/898 (97.8%) over 899bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2282/2285 (99.9%) over 2286bp for offset 0 <== THIS IS REAL YLR069C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR069C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2217 (0.4%). Conflicting: 10/2217 (0.5%). NoInfo: 6/2217 (0.3%). Certain keep: 2193/2217 (98.9%) ########################## YLR070C (1071bp = 357AA) has 8 hits (XYL2) YLR070c Spar (test2) orthologous hit at 86% f1061/1069 (99.3%) over 1071bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 61% f856/1041 (82.2%) over 1066bp for offset 1 Smik (test3) Longest island has f89 at 62% over 589bp Smik (test2) non-orthologous hit at 54% f243/573 (42.4%) over 602bp for offset 2 Smik (test3) Longest island has f95 at 62% over 81bp Smik (test2) non-orthologous hit at 63% f400/510 (78.4%) over 524bp for offset 0 Smik (test3) Longest island has f78 at 61% over 204bp Sbay (test2) orthologous hit at 76% f1067/1070 (99.7%) over 1071bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|________|_______|________|_______|_______|________|_______|________|_____| 89f 62% 589bp 78f 61% 204bp Sm627full |.........|ooooooooooooooooooooooooooooooooooooooooooooooooo>..............|oooooooooooooo|o> 70f 584f 53% 55bp 100f81f95f 62% 81bp Sm370full |.........|===>|xxx>...............|xx>|oo|======>.> | 87f 64% 154bp 89f 72% 114bp78f 61% 204bp Sm784brk |===========>..|========>...|===============|> YLR070C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR070C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2218 (0.4%). Conflicting: 10/2218 (0.5%). NoInfo: 6/2218 (0.3%). Certain keep: 2194/2218 (98.9%) ########################## YLR071C (3249bp = 1083AA) has 35 hits (RGR1) component of RNA polymerase II holo..olypeptide (158) Spar (test2) orthologous hit at 93% f1922/1922 (100.0%) over 1922bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1816/1820 (99.8%) over 1821bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1557/1567 (99.4%) over 1568bp for offset 0 <== THIS IS REAL YLR071C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR071C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2219 (0.4%). Conflicting: 10/2219 (0.5%). NoInfo: 6/2219 (0.3%). Certain keep: 2195/2219 (98.9%) ########################## YLR074C (501bp = 167AA) has 5 hits (BUD20) Spar (test2) orthologous hit at 89% f501/501 (100.0%) over 501bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f501/501 (100.0%) over 501bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f463/463 (100.0%) over 463bp for offset 0 <== THIS IS REAL YLR074C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR074C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2220 (0.4%). Conflicting: 10/2220 (0.5%). NoInfo: 6/2220 (0.3%). Certain keep: 2196/2220 (98.9%) ########################## YLR075W (666bp = 222AA) has 6 hits (RPL10) Ribosomal protein L10; Ubiquinol-cyto..ng protein (135) Flanking ORFs are: YLR073C and YLR075W. YLR075W skipped ########################## YLR079W (855bp = 285AA) has 24 hits (SIC1) Cdc28p-Clb5 protein kinase inhibitor Spar (test2) orthologous hit at 88% f466/471 (98.9%) over 474bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f399/751 (53.1%) over 754bp for offset 1 Smik (test3) Longest island has f99 at 84% over 403bp <== THIS IS REAL Sbay (test2) orthologous hit at 69% f455/608 (74.8%) over 625bp for offset 0 Sbay (test3) Longest island has f99 at 78% over 401bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 855 |_________|__________|_________|__________|_________|__________|_________|__________|_____| 99f 84% 403bp 100f 81% 338bp Sm1392brk ||oooooooooooooooooooooooooooooooooooooooooo|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx> | 99f 78% 401bp Sb125full |=========================================>......................> | YLR079W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR079W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2221 (0.4%). Conflicting: 10/2221 (0.5%). NoInfo: 6/2221 (0.3%). Certain keep: 2197/2221 (98.9%) ########################## YLR080W (1335bp = 445AA) has 13 hits (EMP46) Hypothetical ORF Spar (test2) orthologous hit at 86% f1047/1123 (93.2%) over 1126bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 59% f727/927 (78.4%) over 950bp for offset 1 Smik (test3) Longest island has f89 at 64% over 299bp Smik (test2) non-orthologous hit at 60% f258/384 (67.2%) over 401bp for offset 0 Smik (test3) Longest island has f83 at 67% over 106bp Smik (test2) non-orthologous hit at 57% f106/243 (43.6%) over 253bp for offset 1 Smik (test3) Longest island has f81 at 54% over 57bp Sbay (test2) orthologous hit at 78% f1034/1092 (94.7%) over 1096bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k |_____|______|______|_____|______|______|______|_____|______|______|______|_____|______|__| 88f 58% 269bp 94f 65% 85bp 89f 64% 299bp Sm514full |.|ooooooooooooooooo>.........|oooo>.......|ooooooooooooooooooo>> | 76f100f 50% 28bp100f 6Sm514full |.....|xx|=>|xxxxxx>..|xxxxx| 100f 6581f 54182f 50% 34bp Sm508full |==>...|ooo>.||o>> | YLR080W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR080W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2222 (0.4%). Conflicting: 10/2222 (0.5%). NoInfo: 6/2222 (0.3%). Certain keep: 2198/2222 (98.9%) ########################## YLR081W (1725bp = 575AA) has 116 hits (GAL2) galactose permease Spar (test2) orthologous hit at 91% f1725/1725 (100.0%) over 1725bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 72% f1593/1684 (94.6%) over 1705bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1603/1631 (98.3%) over 1641bp for offset 0 <== THIS IS REAL YLR081W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR081W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2223 (0.4%). Conflicting: 10/2223 (0.4%). NoInfo: 6/2223 (0.3%). Certain keep: 2199/2223 (98.9%) ########################## YLR082C (1179bp = 393AA) has 9 hits (SRL2) Suppressor of rad53 lethality Spar (test2) orthologous hit at 89% f1179/1179 (100.0%) over 1179bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 60% f86/185 (46.5%) over 198bp for offset 0 Smik (test3) Longest island has f68 at 61% over 69bp Sbay (test2) orthologous hit at 78% f1170/1177 (99.4%) over 1179bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|______|_______|_______|______|_______|_______|______|_______|______|______| 68f 6187f 76100f 71% 35Sm361full ||====>|==>|o|x> | YLR082C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR082C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2224 (0.4%). Conflicting: 10/2224 (0.4%). NoInfo: 6/2224 (0.3%). Certain keep: 2200/2224 (98.9%) ########################## YLR083C (2004bp = 668AA) has 17 hits (EMP70) endosomal membrane protein Spar (test2) orthologous hit at 90% f1995/1999 (99.8%) over 2000bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f506/506 (100.0%) over 506bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1449/1464 (99.0%) over 1466bp for offset 0 <== THIS IS REAL YLR083C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR083C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2225 (0.4%). Conflicting: 10/2225 (0.4%). NoInfo: 6/2225 (0.3%). Certain keep: 2201/2225 (98.9%) ########################## YLR084C (3663bp = 1221AA) has 18 hits (RAX2) YLR084C Spar (test2) orthologous hit at 87% f3663/3663 (100.0%) over 3663bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f1341/1393 (96.3%) over 1396bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f3624/3654 (99.2%) over 3663bp for offset 0 <== THIS IS REAL YLR084C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR084C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2226 (0.4%). Conflicting: 10/2226 (0.4%). NoInfo: 6/2226 (0.3%). Certain keep: 2202/2226 (98.9%) ########################## YLR085C (1317bp = 439AA) has 5 hits (ARP6) Actin-related protein Spar (test2) orthologous hit at 90% f1309/1315 (99.5%) over 1317bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f593/599 (99.0%) over 601bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1290/1311 (98.4%) over 1316bp for offset 0 <== THIS IS REAL YLR085C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR085C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2227 (0.4%). Conflicting: 10/2227 (0.4%). NoInfo: 6/2227 (0.3%). Certain keep: 2203/2227 (98.9%) ########################## YLR086W (4257bp = 1419AA) has 63 hits (SMC4) SMC chromosomal ATPase family member Spar (test2) orthologous hit at 88% f4253/4255 (100.0%) over 4256bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1138/1162 (97.9%) over 1163bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f4204/4243 (99.1%) over 4257bp for offset 0 <== THIS IS REAL YLR086W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR086W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2228 (0.4%). Conflicting: 10/2228 (0.4%). NoInfo: 6/2228 (0.3%). Certain keep: 2204/2228 (98.9%) ########################## YLR087C (8877bp = 2959AA) has 17 hits (CSF1) Spar (test2) orthologous hit at 91% f8877/8877 (100.0%) over 8877bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1297/1331 (97.4%) over 1332bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f6034/8863 (68.1%) over 8877bp for offset 0 Sbay (test3) Longest island has f99 at 82% over 6079bp <== THIS IS REAL 0123456789111111111122222222223333333333444444444455555555556666666666777k77777778888888888k |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||_||||||||||||||||| 99f 83% 2777bp 99f 82% 6079bp Sb126full |===========================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YLR087C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR087C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2229 (0.4%). Conflicting: 10/2229 (0.4%). NoInfo: 6/2229 (0.3%). Certain keep: 2205/2229 (98.9%) ########################## YLR088W (1845bp = 615AA) has 15 hits (GAA1) Possible component of GPI:protein transamidase Spar (test2) orthologous hit at 90% f1845/1845 (100.0%) over 1845bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f671/671 (100.0%) over 671bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1175/1836 (64.0%) over 1843bp for offset 2 Sbay (test3) Longest island has f98 at 80% over 1199bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|____|____|____|____|___|____|____|____|____|____|____|____|___|____|__| 100f 84% 649bp 98f 80% 1199bp Sb126full |==============================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YLR088W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR088W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2230 (0.4%). Conflicting: 10/2230 (0.4%). NoInfo: 6/2230 (0.3%). Certain keep: 2206/2230 (98.9%) ########################## YLR090W (1380bp = 460AA) has 10 hits (XDJ1) Homolog of E. coli DnaJ Spar (test2) orthologous hit at 88% f1376/1379 (99.8%) over 1380bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1373/1379 (99.6%) over 1380bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1119/1140 (98.2%) over 1142bp for offset 0 <== THIS IS REAL YLR090W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR090W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2231 (0.4%). Conflicting: 10/2231 (0.4%). NoInfo: 6/2231 (0.3%). Certain keep: 2207/2231 (98.9%) ########################## YLR092W (2682bp = 894AA) has 19 hits (SUL2) high affinity sulfate permease Spar (test2) orthologous hit at 91% f2682/2682 (100.0%) over 2682bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f382/394 (97.0%) over 395bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2651/2676 (99.1%) over 2682bp for offset 0 <== THIS IS REAL YLR092W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR092W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2232 (0.4%). Conflicting: 10/2232 (0.4%). NoInfo: 6/2232 (0.3%). Certain keep: 2208/2232 (98.9%) ########################## YLR094C (1509bp = 503AA) has 5 hits (GIS3) GIG3 suppressor Spar (test2) orthologous hit at 89% f1504/1508 (99.7%) over 1509bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f1322/1380 (95.8%) over 1387bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1465/1495 (98.0%) over 1509bp for offset 0 <== THIS IS REAL YLR094C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR094C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2233 (0.4%). Conflicting: 10/2233 (0.4%). NoInfo: 6/2233 (0.3%). Certain keep: 2209/2233 (98.9%) ########################## YLR095C (2439bp = 813AA) has 282 hits (IOC2) ISWI One Complex Spar (test2) orthologous hit at 86% f2419/2431 (99.5%) over 2439bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f1589/1609 (98.8%) over 1612bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f2333/2371 (98.4%) over 2386bp for offset 2 <== THIS IS REAL YLR095C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR095C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2234 (0.4%). Conflicting: 10/2234 (0.4%). NoInfo: 6/2234 (0.3%). Certain keep: 2210/2234 (98.9%) ########################## YLR096W (3444bp = 1148AA) has 106 hits (KIN2) Serine/threonine protein kinase Spar (test2) orthologous hit at 85% f2483/2643 (93.9%) over 2656bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 79% f951/1014 (93.8%) over 1018bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1374/1472 (93.3%) over 1482bp for offset 2 <== THIS IS REAL YLR096W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR096W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2235 (0.4%). Conflicting: 10/2235 (0.4%). NoInfo: 6/2235 (0.3%). Certain keep: 2211/2235 (98.9%) ########################## YLR098C (1947bp = 649AA) has 15 hits (CHA4) DNA-binding transcriptional activator or CHA1 Spar (test2) orthologous hit at 91% f1945/1945 (100.0%) over 1945bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1569/1580 (99.3%) over 1581bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1569/1579 (99.4%) over 1583bp for offset 0 <== THIS IS REAL YLR098C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR098C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2236 (0.4%). Conflicting: 10/2236 (0.4%). NoInfo: 6/2236 (0.3%). Certain keep: 2212/2236 (98.9%) ########################## YLR099C (1185bp = 395AA) has 7 hits (ICT1) Increased Copper Tolerance; Similar to Ecm18p Spar (test2) orthologous hit at 90% f1185/1185 (100.0%) over 1185bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f773/773 (100.0%) over 773bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1180/1183 (99.7%) over 1184bp for offset 0 <== THIS IS REAL YLR099C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR099C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2237 (0.4%). Conflicting: 10/2237 (0.4%). NoInfo: 6/2237 (0.3%). Certain keep: 2213/2237 (98.9%) ########################## YLR100W (1044bp = 348AA) has 5 hits (ERG27) 3-keto sterol reductase Flanking ORFs are: YLR098C and YLR099W-A. YLR100W skipped ########################## YLR102C (798bp = 266AA) has 7 hits (APC9) subunit of the anaphase promoting complex (APC) Spar (test2) orthologous hit at 88% f798/798 (100.0%) over 798bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f677/748 (90.5%) over 754bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f787/796 (98.9%) over 798bp for offset 0 <== THIS IS REAL YLR102C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR102C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2238 (0.4%). Conflicting: 10/2238 (0.4%). NoInfo: 6/2238 (0.3%). Certain keep: 2214/2238 (98.9%) ########################## YLR103C (1953bp = 651AA) has 66 hits (CDC45) Chromosomal DNA replication initiat..on protein (91) Spar (test2) orthologous hit at 90% f1948/1952 (99.8%) over 1952bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f739/744 (99.3%) over 745bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1423/1440 (98.8%) over 1442bp for offset 0 <== THIS IS REAL YLR103C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR103C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2239 (0.4%). Conflicting: 10/2239 (0.4%). NoInfo: 6/2239 (0.3%). Certain keep: 2215/2239 (98.9%) ########################## YLR105C (1134bp = 378AA) has 12 hits (SEN2) tRNA splicing endonuclease subunit Spar (test2) orthologous hit at 89% f1134/1134 (100.0%) over 1134bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f742/852 (87.1%) over 854bp for offset 0 Smik (test3) Longest island has f98 at 81% over 709bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1133/1133 (100.0%) over 1133bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|_______|_______|_______|_______|_______|__| 98f 81% 709bp Sm1539brk |========================================================>..........> | YLR105C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR105C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2240 (0.4%). Conflicting: 10/2240 (0.4%). NoInfo: 6/2240 (0.3%). Certain keep: 2216/2240 (98.9%) ########################## YLR106C (14733bp = 4911AA) has 545 hits (MDN1) Protein required for cell viability Spar (test2) orthologous hit at 88% f9352/9385 (99.6%) over 9391bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f2434/2440 (99.8%) over 2442bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f2315/2495 (92.8%) over 2530bp for offset 0 <== THIS IS REAL YLR106C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR106C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2241 (0.4%). Conflicting: 10/2241 (0.4%). NoInfo: 6/2241 (0.3%). Certain keep: 2217/2241 (98.9%) ########################## YLR107W (1215bp = 405AA) has 12 hits (REX3) RNA EXonuclease; member of 3'->5' ex..:5110-5118 (151) Spar (test2) non-orthologous hit at 88% f1215/1215 (100.0%) over 1215bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1095/1099 (99.6%) over 1100bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f856/885 (96.7%) over 889bp for offset 0 <== THIS IS REAL YLR107W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR107W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2242 (0.4%). Conflicting: 10/2242 (0.4%). NoInfo: 6/2242 (0.3%). Certain keep: 2218/2242 (98.9%) ########################## YLR109W (531bp = 177AA) has 5 hits (AHP1) alkyl hydroperoxide reductase Spar (test2) orthologous hit at 93% f531/531 (100.0%) over 531bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 91% f479/479 (100.0%) over 479bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f531/531 (100.0%) over 531bp for offset 0 <== THIS IS REAL YLR109W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR109W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2243 (0.4%). Conflicting: 10/2243 (0.4%). NoInfo: 6/2243 (0.3%). Certain keep: 2219/2243 (98.9%) ########################## YLR110C (402bp = 134AA) has 79 hits (CCW12) Spar (test2) orthologous hit at 96% f402/402 (100.0%) over 402bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f329/347 (94.8%) over 353bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f401/402 (99.8%) over 402bp for offset 0 <== THIS IS REAL YLR110C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR110C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2244 (0.4%). Conflicting: 10/2244 (0.4%). NoInfo: 6/2244 (0.3%). Certain keep: 2220/2244 (98.9%) ########################## YLR113W (1308bp = 436AA) has 92 hits (HOG1) mitogen-activated protein kinase (MAP kinase) Spar (test2) non-orthologous hit at 92% f1308/1308 (100.0%) over 1308bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f438/438 (100.0%) over 438bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 85% f1304/1307 (99.8%) over 1308bp for offset 0 <== THIS IS REAL YLR113W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR113W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2245 (0.4%). Conflicting: 10/2245 (0.4%). NoInfo: 6/2245 (0.3%). Certain keep: 2221/2245 (98.9%) ########################## YLR115W (2580bp = 860AA) has 65 hits (CFT2) Component of cleavage factor II (CF ..r 1 (PF I) (148) Spar (test2) orthologous hit at 90% f2569/2578 (99.7%) over 2580bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f1458/1495 (97.5%) over 1499bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1772/1800 (98.4%) over 1804bp for offset 0 <== THIS IS REAL YLR115W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR115W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2246 (0.4%). Conflicting: 10/2246 (0.4%). NoInfo: 6/2246 (0.3%). Certain keep: 2222/2246 (98.9%) ########################## YLR116W (1431bp = 477AA) has 6 hits (MSL5) Branchpoint bridging protein Spar (test2) orthologous hit at 88% f1423/1430 (99.5%) over 1431bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f942/997 (94.5%) over 1001bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1358/1414 (96.0%) over 1424bp for offset 0 <== THIS IS REAL YLR116W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR116W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2247 (0.4%). Conflicting: 10/2247 (0.4%). NoInfo: 6/2247 (0.3%). Certain keep: 2223/2247 (98.9%) ########################## YLR117C (2064bp = 688AA) has 20 hits (CLF1) pre-mRNA splicing factor Spar (test2) orthologous hit at 89% f2048/2062 (99.3%) over 2064bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1863/2060 (90.4%) over 2064bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2049/2061 (99.4%) over 2064bp for offset 0 <== THIS IS REAL YLR117C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR117C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2248 (0.4%). Conflicting: 10/2248 (0.4%). NoInfo: 6/2248 (0.3%). Certain keep: 2224/2248 (98.9%) ########################## YLR119W (642bp = 214AA) has 18 hits (SRN2) may be involved in RNA export from nucleus Spar (test2) orthologous hit at 86% f598/640 (93.4%) over 642bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f585/635 (92.1%) over 641bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f238/304 (78.3%) over 310bp for offset 1 Sbay (test3) Longest island has f92 at 75% over 239bp 0 100 200 300 400 500 600 642 |_____________|_____________|_____________|_____________|_____________|_____________|_____| 10072f 6092f 75% 239bp Sb133brk |.|o>|xxxxx|oooooooooooooooooooooooooooooooo> | YLR119W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR119W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2249 (0.4%). Conflicting: 10/2249 (0.4%). NoInfo: 6/2249 (0.3%). Certain keep: 2225/2249 (98.9%) ########################## YLR120C (1710bp = 570AA) has 23 hits (YPS1) GPI-anchored aspartic protease Spar (test2) orthologous hit at 90% f1710/1710 (100.0%) over 1710bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f417/468 (89.1%) over 469bp for offset 0 Smik (test3) Longest island has f100 at 86% over 417bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 78% f749/1301 (57.6%) over 1317bp for offset 0 Sbay (test3) Longest island has f93 at 78% over 798bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 11k |____|____|____|_____|____|____|____|_____|____|____|____|_____|____|____|____|_____|____|| 100f 86% 417bp Sm1418brk |..|xxxxxxxxxxxxxxxxxxxxx| 98f 79% 532bp 93f 78% 798bp Sb134full |===========================|ooooooooooooooooooooooooooooooooooooooooo| YLR120C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR120C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2250 (0.4%). Conflicting: 10/2250 (0.4%). NoInfo: 6/2250 (0.3%). Certain keep: 2226/2250 (98.9%) ########################## YLR121C (1527bp = 509AA) has 28 hits (YPS3) GPI-anchored aspartic protease Spar (test2) orthologous hit at 89% f1527/1527 (100.0%) over 1527bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 60% f528/661 (79.9%) over 675bp for offset 0 Smik (test3) Longest island has f87 at 61% over 357bp Smik (test2) non-orthologous hit at 64% f400/517 (77.4%) over 533bp for offset 2 Smik (test3) Longest island has f84 at 64% over 258bp Smik (test2) non-orthologous hit at 64% f226/307 (73.6%) over 317bp for offset 0 Smik (test3) Longest island has f93 at 67% over 209bp Sbay (test2) non-orthologous hit at 63% f554/989 (56.0%) over 1017bp for offset 0 Sbay (test3) Longest island has f88 at 65% over 374bp Sbay (test2) non-orthologous hit at 77% f780/793 (98.4%) over 796bp for offset 2 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k1k |____|_____|_____|_____|_____|_____|_____|_____|_____|____|_____|_____|_____|_____|_____|_| 87f 61% 357bp 90f 61% 153bp Sm1417brk |.....|oooooooooooooooooooo>....|oooooooo> | 75f 67% 219bp 84f 64% 258bp Sm1071brk ||xxxxxxxxxxxx>..|xxxxxxxxxxxxxx> | 93f 67% 209bp Sm1418brk |......|xxxxxxxxxxx> | 89f 67% 309bp 88f 65% 374bp Sb134full |.|=================>...................|ooooooooooooooooooooo> | YLR121C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR121C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2251 (0.4%). Conflicting: 10/2251 (0.4%). NoInfo: 6/2251 (0.3%). Certain keep: 2227/2251 (98.9%) ########################## YLR127C (2562bp = 854AA) has 19 hits (APC2) subunit of the anaphase promoting co..plex (APC) (91) Spar (test2) orthologous hit at 89% f2549/2560 (99.6%) over 2562bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1066/1066 (100.0%) over 1066bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1796/1839 (97.7%) over 1847bp for offset 0 <== THIS IS REAL YLR127C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR127C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2252 (0.4%). Conflicting: 10/2252 (0.4%). NoInfo: 6/2252 (0.3%). Certain keep: 2228/2252 (98.9%) ########################## YLR129W (2832bp = 944AA) has 35 hits (DIP2) interacts with Dom3p Spar (test2) orthologous hit at 90% f2832/2832 (100.0%) over 2832bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1618/1622 (99.8%) over 1623bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1734/1734 (100.0%) over 1734bp for offset 0 <== THIS IS REAL YLR129W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR129W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2253 (0.4%). Conflicting: 10/2253 (0.4%). NoInfo: 6/2253 (0.3%). Certain keep: 2229/2253 (98.9%) ########################## YLR130C (1269bp = 423AA) has 12 hits (ZRT2) Low-affinity zinc transport protein Spar (test2) orthologous hit at 89% f1269/1269 (100.0%) over 1269bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 60% f383/480 (79.8%) over 497bp for offset 0 Smik (test3) Longest island has f77 at 62% over 215bp Smik (test2) non-orthologous hit at 60% f156/228 (68.4%) over 237bp for offset 0 Smik (test3) Longest island has f87 at 62% over 109bp Sbay (test2) orthologous hit at 80% f1228/1258 (97.6%) over 1268bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|______|______|______|______|______|______|______|_______|______|____| 97f 63% 155b86f 60% 35bp2% 215bp Sm349full |.|==========>|==>...|==============| 85f 671187f 62% 109bp Sm349full |===>.|||=======>> | YLR130C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR130C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2254 (0.4%). Conflicting: 10/2254 (0.4%). NoInfo: 6/2254 (0.3%). Certain keep: 2230/2254 (98.9%) ########################## YLR131C (2313bp = 771AA) has 14 hits (ACE2) zinc finger transcription factor Spar (test2) orthologous hit at 89% f2310/2310 (100.0%) over 2313bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f991/994 (99.7%) over 998bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1012/1017 (99.5%) over 1021bp for offset 0 <== THIS IS REAL YLR131C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR131C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2255 (0.4%). Conflicting: 10/2255 (0.4%). NoInfo: 6/2255 (0.3%). Certain keep: 2231/2255 (98.9%) ########################## YLR133W (1749bp = 583AA) has 13 hits (CKI1) choline kinase Spar (test2) orthologous hit at 90% f1749/1749 (100.0%) over 1749bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f851/855 (99.5%) over 856bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1720/1742 (98.7%) over 1747bp for offset 2 <== THIS IS REAL YLR133W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR133W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2256 (0.4%). Conflicting: 10/2256 (0.4%). NoInfo: 6/2256 (0.3%). Certain keep: 2232/2256 (98.9%) ########################## YLR134W (1692bp = 564AA) has 20 hits (PDC5) pyruvate decarboxylase Spar (test2) orthologous hit at 95% f1692/1692 (100.0%) over 1692bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f960/967 (99.3%) over 970bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f1692/1692 (100.0%) over 1692bp for offset 0 <== THIS IS REAL YLR134W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR134W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2257 (0.4%). Conflicting: 10/2257 (0.4%). NoInfo: 6/2257 (0.3%). Certain keep: 2233/2257 (98.9%) ########################## YLR135W (2247bp = 749AA) has 19 hits (SLX4) Spar (test2) orthologous hit at 86% f2238/2241 (99.9%) over 2247bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f143/185 (77.3%) over 187bp for offset 0 Smik (test3) Longest island has f100 at 88% over 105bp Sbay (test2) orthologous hit at 72% f1512/1669 (90.6%) over 1696bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k2k |___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|_| 831100f Sm1412brk |=||====| YLR135W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR135W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2258 (0.4%). Conflicting: 10/2258 (0.4%). NoInfo: 6/2258 (0.3%). Certain keep: 2234/2258 (98.9%) ########################## YLR136C (858bp = 286AA) has 11 hits (TIS11) homolog of mammalian TIS11 Spar (test2) orthologous hit at 89% f855/857 (99.8%) over 858bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f816/830 (98.3%) over 834bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f794/797 (99.6%) over 798bp for offset 0 <== THIS IS REAL YLR136C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR136C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2259 (0.4%). Conflicting: 10/2259 (0.4%). NoInfo: 6/2259 (0.3%). Certain keep: 2235/2259 (98.9%) ########################## YLR138W (2958bp = 986AA) has 62 hits (NHA1) Putative Na+/H+ antiporter Spar (test2) orthologous hit at 91% f2954/2957 (99.9%) over 2958bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f49/86 (57.0%) over 86bp for offset 1 Smik (test3) Longest island has f100 at 90% over 49bp Sbay (test2) orthologous hit at 84% f819/819 (100.0%) over 819bp for offset 0 <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 2k2k |__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|___|__|__|__|__|__|_| 1100f 84% 37bp Sm1503brk ||> | YLR138W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR138W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2260 (0.4%). Conflicting: 10/2260 (0.4%). NoInfo: 6/2260 (0.3%). Certain keep: 2236/2260 (98.9%) ########################## YLR139C (1932bp = 644AA) has 9 hits (SLS1) 73 kDa mitochondrial integral membrane protein Spar (test2) orthologous hit at 85% f1360/1407 (96.7%) over 1414bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1048/1080 (97.0%) over 1086bp for offset 2 <== THIS IS REAL YLR139C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR139C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2261 (0.4%). Conflicting: 10/2261 (0.4%). NoInfo: 6/2261 (0.3%). Certain keep: 2237/2261 (98.9%) ########################## YLR141W (1092bp = 364AA) has 8 hits (RRN5) transcription factor, member of UAF (..and Rrn10p (135) Flanking ORFs are: YLR138W and YLR140W. YLR141W skipped ########################## YLR142W (1431bp = 477AA) has 6 hits (PUT1) proline oxidase Spar (test2) orthologous hit at 90% f1430/1431 (99.9%) over 1431bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1298/1304 (99.5%) over 1305bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f916/952 (96.2%) over 954bp for offset 0 <== THIS IS REAL YLR142W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR142W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2262 (0.4%). Conflicting: 10/2262 (0.4%). NoInfo: 6/2262 (0.3%). Certain keep: 2238/2262 (98.9%) ########################## YLR144C (2340bp = 780AA) has 16 hits (ACF2) involved in cortical actin cytoskele..n assembly (92) Spar (test2) orthologous hit at 89% f2332/2339 (99.7%) over 2340bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1237/1258 (98.3%) over 1260bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2109/2122 (99.4%) over 2124bp for offset 0 <== THIS IS REAL YLR144C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR144C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2263 (0.4%). Conflicting: 10/2263 (0.4%). NoInfo: 6/2263 (0.3%). Certain keep: 2239/2263 (98.9%) ########################## YLR146C (903bp = 301AA) has 15 hits (SPE4) Spermine Synthase Spar (test2) orthologous hit at 89% f898/902 (99.6%) over 903bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f215/220 (97.7%) over 221bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f328/328 (100.0%) over 328bp for offset 0 <== THIS IS REAL YLR146C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR146C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2264 (0.4%). Conflicting: 10/2264 (0.4%). NoInfo: 6/2264 (0.3%). Certain keep: 2240/2264 (98.9%) ########################## YLR147C (306bp = 102AA) has 7 hits (SMD3) encodes a core snRNP protein Spar (test2) orthologous hit at 92% f305/305 (100.0%) over 305bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f303/303 (100.0%) over 303bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f306/306 (100.0%) over 306bp for offset 0 <== THIS IS REAL YLR147C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR147C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2265 (0.4%). Conflicting: 10/2265 (0.4%). NoInfo: 6/2265 (0.3%). Certain keep: 2241/2265 (98.9%) ########################## YLR148W (2757bp = 919AA) has 65 hits (PEP3) vacuolar membrane protein Spar (test2) orthologous hit at 89% f2682/2709 (99.0%) over 2711bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 53% f432/1063 (40.6%) over 1129bp for offset 0 Smik (test3) Longest island has f94 at 49% over 63bp Smik (test2) non-orthologous hit at 53% f446/1069 (41.7%) over 1133bp for offset 0 Smik (test3) Longest island has f84 at 54% over 159bp Smik (test2) non-orthologous hit at 53% f392/888 (44.1%) over 942bp for offset 0 Smik (test3) Longest island has f74 at 52% over 81bp Smik (test2) non-orthologous hit at 55% f280/794 (35.3%) over 849bp for offset 2 Smik (test3) Longest island has f61 at 56% over 71bp Sbay (test2) orthologous hit at 79% f1748/1756 (99.5%) over 1764bp for offset 0 <== THIS IS REAL 0 100200300 400500600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k2k |__|__|__|___|__|__|__|___|__|__|__|___|__|__|__|___|__|__|___|__|__|__|___|__|__|__|___|_| 83f 52% 54bp 94f 49% 83f 52%82f 50% 44bp Sm317brk |.......|=>..........|o>.....|=>....|o> | 100f 572f 584f 54% 159bp 77f 49% 65Sm25brk |...|=>...|ooo>|oooo>..............|=> | 76f 55%74f86f 5678f8585f 55% 55bSm621brk |=>....|=>|>....|=>|x|=>.......>| 68f 581f 63%807761f 56%100f 53% 36bp Sm438full |....|>...|......|x|>|=>...>|> | YLR148W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR148W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2266 (0.4%). Conflicting: 10/2266 (0.4%). NoInfo: 6/2266 (0.3%). Certain keep: 2242/2266 (98.9%) ########################## YLR150W (822bp = 274AA) has 29 hits (STM1) gene product has affinity for quadrup..leic acids (97) Spar (test2) orthologous hit at 88% f600/642 (93.5%) over 643bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 92% f803/803 (100.0%) over 806bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 90% f691/698 (99.0%) over 699bp for offset 0 <== THIS IS REAL YLR150W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR150W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2267 (0.4%). Conflicting: 10/2267 (0.4%). NoInfo: 6/2267 (0.3%). Certain keep: 2243/2267 (98.9%) ########################## YLR151C (1023bp = 341AA) has 4 hits (PCD1) nudix hydrolase family member Spar (test2) orthologous hit at 89% f1019/1022 (99.7%) over 1023bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1011/1021 (99.0%) over 1023bp for offset 0 <== THIS IS REAL YLR151C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR151C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2268 (0.4%). Conflicting: 10/2268 (0.4%). NoInfo: 6/2268 (0.3%). Certain keep: 2244/2268 (98.9%) ########################## YLR153C (2052bp = 684AA) has 9 hits (ACS2) acetyl-coenzyme A synthetase Spar (test2) orthologous hit at 93% f2052/2052 (100.0%) over 2052bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f86/105 (81.9%) over 106bp for offset 2 Smik (test3) Longest island has f100 at 90% over 86bp Sbay (test2) orthologous hit at 88% f2052/2052 (100.0%) over 2052bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k |___|___|____|___|___|____|___|____|___|___|____|___|____|___|___|____|___|___|____|___|__| 1100fSm1568brk ||xxx| YLR153C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR153C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2269 (0.4%). Conflicting: 10/2269 (0.4%). NoInfo: 6/2269 (0.3%). Certain keep: 2245/2269 (98.9%) ########################## YLR155C (1089bp = 363AA) has 3 hits (ASP3-1) nitrogen catabolite-regulated cell-..aginase II (102) Spar (test2) non-orthologous hit at 57% f766/968 (79.1%) over 997bp for offset 0 Spar (test3) Longest island has f86 at 59% over 616bp Smik (test2) non-orthologous hit at 60% f539/678 (79.5%) over 702bp for offset 0 Smik (test3) Longest island has f92 at 62% over 271bp 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|________|_______|_______|_______|________|_______|_______|_______| 86f 59% 616bp Sp106full |==================================================>...............................| 81f 60% 223bp 92f 62% 271bp Sm374full |==================>........|======================>......> | YLR155C: kill: - keep: YLR155C - Not enough info. Kill () and Keep () Current total: Certain kills: 8/2270 (0.4%). Conflicting: 10/2270 (0.4%). NoInfo: 7/2270 (0.3%). Certain keep: 2245/2270 (98.9%) ########################## YLR157C (1089bp = 363AA) has 3 hits (ASP3-2) nitrogen catabolite-regulated cell-..aginase II (102) Spar (test2) non-orthologous hit at 57% f766/968 (79.1%) over 997bp for offset 0 Spar (test3) Longest island has f86 at 59% over 616bp Smik (test2) non-orthologous hit at 60% f539/678 (79.5%) over 702bp for offset 0 Smik (test3) Longest island has f92 at 62% over 271bp 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|________|_______|_______|_______|________|_______|_______|_______| 86f 59% 616bp Sp106full |==================================================>...............................| 81f 60% 223bp 92f 62% 271bp Sm374full |==================>........|======================>......> | YLR157C: kill: - keep: YLR157C - Not enough info. Kill () and Keep () Current total: Certain kills: 8/2271 (0.4%). Conflicting: 10/2271 (0.4%). NoInfo: 8/2271 (0.4%). Certain keep: 2245/2271 (98.9%) ########################## YLR158C (1089bp = 363AA) has 3 hits (ASP3-3) nitrogen catabolite-regulated cell-..aginase II (102) Spar (test2) non-orthologous hit at 57% f766/968 (79.1%) over 997bp for offset 0 Spar (test3) Longest island has f86 at 59% over 616bp Smik (test2) non-orthologous hit at 60% f539/678 (79.5%) over 702bp for offset 0 Smik (test3) Longest island has f92 at 62% over 271bp 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|________|_______|_______|_______|________|_______|_______|_______| 86f 59% 616bp Sp106full |==================================================>...............................| 81f 60% 223bp 92f 62% 271bp Sm374full |==================>........|======================>......> | YLR158C: kill: - keep: YLR158C - Not enough info. Kill () and Keep () Current total: Certain kills: 8/2272 (0.4%). Conflicting: 10/2272 (0.4%). NoInfo: 9/2272 (0.4%). Certain keep: 2245/2272 (98.8%) ########################## YLR160C (1089bp = 363AA) has 3 hits (ASP3-4) nitrogen catabolite-regulated cell-..aginase II (102) Spar (test2) non-orthologous hit at 57% f766/968 (79.1%) over 997bp for offset 0 Spar (test3) Longest island has f86 at 59% over 616bp Smik (test2) non-orthologous hit at 60% f539/678 (79.5%) over 702bp for offset 0 Smik (test3) Longest island has f92 at 62% over 271bp 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|_______|_______|________|_______|_______|_______|________|_______|_______|_______| 86f 59% 616bp Sp106full |==================================================>...............................| 81f 60% 223bp 92f 62% 271bp Sm374full |==================>........|======================>......> | YLR160C: kill: - keep: YLR160C - Not enough info. Kill () and Keep () Current total: Certain kills: 8/2273 (0.4%). Conflicting: 10/2273 (0.4%). NoInfo: 10/2273 (0.4%). Certain keep: 2245/2273 (98.8%) ########################## YLR163C (1389bp = 463AA) has 6 hits (MAS1) mitochondrial processing protease subunit Spar (test2) orthologous hit at 90% f1389/1389 (100.0%) over 1389bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f489/489 (100.0%) over 489bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1389/1389 (100.0%) over 1389bp for offset 0 <== THIS IS REAL YLR163C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR163C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2274 (0.4%). Conflicting: 10/2274 (0.4%). NoInfo: 10/2274 (0.4%). Certain keep: 2246/2274 (98.8%) ########################## YLR165C (765bp = 255AA) has 6 hits (PUS5) Spar (test2) orthologous hit at 85% f765/765 (100.0%) over 765bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 56% f139/330 (42.1%) over 345bp for offset 0 Smik (test3) Longest island has f87 at 63% over 78bp Sbay (test2) orthologous hit at 72% f169/169 (100.0%) over 169bp for offset 0 Sbay (test3) Longest island has f100 at 73% over 169bp 0 100 200 300 400 500 600 700 765 |__________|___________|___________|___________|__________|___________|___________|_______| 87f 63% 792f 4764f 56% 50bp 100f 59% 39bp Sm265full |......|oooooooo|===>.|xxxxx>.........|===> | 100f 73% 169bp Sb983brk |===================>| YLR165C: kill: - keep: Spar YLR165C - Not enough info. Kill () and Keep (Spar) Current total: Certain kills: 8/2275 (0.4%). Conflicting: 10/2275 (0.4%). NoInfo: 11/2275 (0.5%). Certain keep: 2246/2275 (98.7%) ########################## YLR166C (2616bp = 872AA) has 47 hits (SEC10) 100 kD component of the Exocyst com..and EXO70. (216) Spar (test2) orthologous hit at 91% f2615/2615 (100.0%) over 2615bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1470/1476 (99.6%) over 1477bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f597/597 (100.0%) over 597bp for offset 0 <== THIS IS REAL YLR166C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR166C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2276 (0.4%). Conflicting: 10/2276 (0.4%). NoInfo: 11/2276 (0.5%). Certain keep: 2247/2276 (98.7%) ########################## YLR167W (459bp = 153AA) has 40 hits (RPS31) Ribosomal protein S31 (S37) (YS24) Spar (test2) orthologous hit at 96% f459/459 (100.0%) over 459bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 90% f226/235 (96.2%) over 235bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 96% f459/459 (100.0%) over 459bp for offset 0 <== THIS IS REAL YLR167W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR167W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2277 (0.4%). Conflicting: 10/2277 (0.4%). NoInfo: 11/2277 (0.5%). Certain keep: 2248/2277 (98.7%) ########################## YLR170C (471bp = 157AA) has 7 hits (APS1) clathrin-associated protein complex, s..ll subunit (92) . YLR170C skipped ########################## YLR172C (903bp = 301AA) has 5 hits (DPH5) S-adenosylmethionine (AdoMet)-dependen..osynthesis (127) Spar (test2) orthologous hit at 90% f903/903 (100.0%) over 903bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f788/788 (100.0%) over 788bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f903/903 (100.0%) over 903bp for offset 0 <== THIS IS REAL YLR172C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR172C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2278 (0.4%). Conflicting: 10/2278 (0.4%). NoInfo: 11/2278 (0.5%). Certain keep: 2249/2278 (98.7%) ########################## YLR174W (1239bp = 413AA) has 14 hits (IDP2) Cytosolic form of NADP-dependent iso..ydrogenase (101) Spar (test2) orthologous hit at 91% f1232/1237 (99.6%) over 1238bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f574/574 (100.0%) over 574bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 71% f1178/1229 (95.9%) over 1239bp for offset 0 <== THIS IS REAL YLR174W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR174W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2279 (0.4%). Conflicting: 10/2279 (0.4%). NoInfo: 11/2279 (0.5%). Certain keep: 2250/2279 (98.7%) ########################## YLR175W (1452bp = 484AA) has 394 hits (CBF5) major low affinity 55 kDa Centromer..ng protein (109) Spar (test2) orthologous hit at 92% f1435/1449 (99.0%) over 1450bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1421/1443 (98.5%) over 1450bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 90% f1184/1184 (100.0%) over 1184bp for offset 0 <== THIS IS REAL YLR175W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR175W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2280 (0.4%). Conflicting: 10/2280 (0.4%). NoInfo: 11/2280 (0.5%). Certain keep: 2251/2280 (98.7%) ########################## YLR176C (2436bp = 812AA) has 37 hits (RFX1) DNA binding protein, homologous to m..4 proteins (104) Spar (test2) orthologous hit at 88% f2077/2430 (85.5%) over 2435bp for offset 2 Spar (test3) Longest island has f100 at 89% over 2079bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f1661/1714 (96.9%) over 1720bp for offset 2 <== THIS IS REAL Sbay (test2) non-orthologous hit at 53% f264/737 (35.8%) over 776bp for offset 1 Sbay (test3) Longest island has f73 at 53% over 104bp Sbay (test2) non-orthologous hit at 55% f228/520 (43.8%) over 553bp for offset 0 Sbay (test3) Longest island has f92 at 63% over 62bp Sbay (test2) non-orthologous hit at 56% f183/459 (39.9%) over 490bp for offset 0 Sbay (test3) Longest island has f69 at 55% over 49bp Sbay (test2) non-orthologous hit at 58% f150/314 (47.8%) over 337bp for offset 0 Sbay (test3) Longest island has f76 at 64% over 72bp 0 100 200 300400 500 600700 800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k2k |__|___|___|__|___|___|__|___|___|__|___|___|___|__|___|___|__|___|___|__|___|___|__|___|_| 100f 91% 2100f 89% 2079bp Sp136full |..|ooooooooo|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 1072f7875f 49% 610084f 573f 53% Sb773full |>|o>|>|x>......|>.|>...|ooo>> | 92f8582f90f 40% 867f 5Sb662brk |=>|o|=>|x>.....||=>.>| 6988f 84f 100f90f 54% 48bp Sb210full |o|=>.|=>.|>..|x>.> | 67f176f 79f 100f 67% 24bSb117full ||o>||==>|>..| | YLR176C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR176C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2281 (0.4%). Conflicting: 10/2281 (0.4%). NoInfo: 11/2281 (0.5%). Certain keep: 2252/2281 (98.7%) ########################## YLR178C (660bp = 220AA) has 6 hits (TFS1) (putative) lipid binding protein; supr..5 mutation (105) Spar (test2) orthologous hit at 89% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f655/659 (99.4%) over 660bp for offset 0 <== THIS IS REAL YLR178C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR178C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2282 (0.4%). Conflicting: 10/2282 (0.4%). NoInfo: 11/2282 (0.5%). Certain keep: 2253/2282 (98.7%) ########################## YLR180W (1149bp = 383AA) has 7 hits (SAM1) S-adenosylmethionine synthetase Spar (test2) orthologous hit at 93% f1149/1149 (100.0%) over 1149bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f416/431 (96.5%) over 434bp for offset 1 <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f1140/1140 (100.0%) over 1140bp for offset 0 <== THIS IS REAL YLR180W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR180W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2283 (0.4%). Conflicting: 10/2283 (0.4%). NoInfo: 11/2283 (0.5%). Certain keep: 2254/2283 (98.7%) ########################## YLR181C (993bp = 331AA) has 13 hits (VTA1) Hypothetical ORF Spar (test2) orthologous hit at 86% f986/992 (99.4%) over 993bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f638/641 (99.5%) over 642bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 55% f265/568 (46.7%) over 607bp for offset 0 Sbay (test3) Longest island has f73 at 59% over 63bp Sbay (test2) non-orthologous hit at 54% f178/397 (44.8%) over 411bp for offset 1 Sbay (test3) Longest island has f85 at 53% over 53bp Sbay (test2) non-orthologous hit at 54% f228/365 (62.5%) over 381bp for offset 0 Sbay (test3) Longest island has f77 at 56% over 154bp Sbay (test2) non-orthologous hit at 59% f165/228 (72.4%) over 237bp for offset 0 Sbay (test3) Longest island has f87 at 59% over 157bp 0 100 200 300 400 500 600 700 800 900 993 |________|________|________|________|________|________|________|________|________|________| 76f 61% 3100f 50% 46bp 91f 73% 33bp 77f 6473f 59% 63bp Sb702full |oo>.....|xxx>.............|==>...............|===>.|=====> | 100f 61% 31bp 85f 5381f 60%75f 72% 32bp Sb83full |....|o>.............|ooo>.|ooo>..|==>> | 100f 52%81f 54% 118b77f 56% 154bp Sb251full |.|o>.....|xxxxxxxxx>.|xxxxxxxxxxxxx> | 87f 59% 157bp 100f74f 56% 27bp Sb702full |=============>|=>.|oo> | YLR181C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR181C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2284 (0.4%). Conflicting: 10/2284 (0.4%). NoInfo: 11/2284 (0.5%). Certain keep: 2255/2284 (98.7%) ########################## YLR182W (2412bp = 804AA) has 60 hits (SWI6) transcription factor Spar (test2) orthologous hit at 89% f2411/2412 (100.0%) over 2412bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f783/792 (98.9%) over 796bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f2365/2405 (98.3%) over 2412bp for offset 0 <== THIS IS REAL YLR182W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR182W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2285 (0.4%). Conflicting: 10/2285 (0.4%). NoInfo: 11/2285 (0.5%). Certain keep: 2256/2285 (98.7%) ########################## YLR183C (1470bp = 490AA) has 12 hits (TOS4) Hypothetical ORF Spar (test2) orthologous hit at 86% f1415/1437 (98.5%) over 1444bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f1152/1187 (97.1%) over 1198bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f189/189 (100.0%) over 189bp for offset 0 Sbay (test3) Longest island has f100 at 88% over 189bp 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|_____|_____|______|_____|_____|_____|_____|_____|____| 100f 88% 189Sb327brk |===========| YLR183C: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR183C - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2286 (0.3%). Conflicting: 10/2286 (0.4%). NoInfo: 11/2286 (0.5%). Certain keep: 2257/2286 (98.7%) ########################## YLR186W (759bp = 253AA) has 6 hits (EMG1) Essential for Mitotic Growth Spar (test2) non-orthologous hit at 94% f759/759 (100.0%) over 759bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 90% f349/349 (100.0%) over 349bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 87% f759/759 (100.0%) over 759bp for offset 0 <== THIS IS REAL YLR186W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR186W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2287 (0.3%). Conflicting: 10/2287 (0.4%). NoInfo: 11/2287 (0.5%). Certain keep: 2258/2287 (98.7%) ########################## YLR188W (2088bp = 696AA) has 24 hits (MDL1) ATP-binding cassette (ABC) transport..ily member (96) Spar (test2) orthologous hit at 90% f2088/2088 (100.0%) over 2088bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 55% f260/454 (57.3%) over 480bp for offset 0 Smik (test3) Longest island has f72 at 62% over 161bp Smik (test2) non-orthologous hit at 54% f252/311 (81.0%) over 322bp for offset 0 Smik (test3) Longest island has f92 at 52% over 141bp Smik (test2) non-orthologous hit at 57% f167/264 (63.3%) over 278bp for offset 1 Smik (test3) Longest island has f93 at 63% over 84bp Sbay (test2) orthologous hit at 81% f1821/1879 (96.9%) over 1884bp for offset 2 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k |___|___|___|____|___|___|____|___|___|____|___|___|____|___|___|___|____|___|___|____|___| 84f 55% 487f 72f 62% 161bp Sm1364brk ||=>......|=>.|======> | 86f 611092f 52% 141Sm790full |===>||>|=====> | 178893f 73f 54% 80bp Sm1209brk ||o||ooo|ooo> | YLR188W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR188W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2288 (0.3%). Conflicting: 10/2288 (0.4%). NoInfo: 11/2288 (0.5%). Certain keep: 2259/2288 (98.7%) ########################## YLR189C (3597bp = 1199AA) has 15 hits (UGT51) UDP-glucose:sterol glucosyltransferase Spar (test2) orthologous hit at 91% f2297/2302 (99.8%) over 2302bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f768/1020 (75.3%) over 1023bp for offset 2 Smik (test3) Longest island has f99 at 85% over 737bp <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2273/2347 (96.8%) over 2356bp for offset 0 <== THIS IS REAL 0 100203004050060700809001k1k 1k1k 1k1k 1k1k 1k1k 2k2k 2k2k 2k2k 2k2k 2k2k 3k3k 3k3k 3k3k 3k |_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__|_|__| 99f 85% 737bp Sm1377brk |..|xxxxxxxxxxxxxxxxxx>...| YLR189C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR189C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2289 (0.3%). Conflicting: 10/2289 (0.4%). NoInfo: 11/2289 (0.5%). Certain keep: 2260/2289 (98.7%) ########################## YLR191W (1161bp = 387AA) has 7 hits (PEX13) Peroxisomal membrane protein that co..H3) domain (114) Spar (test2) orthologous hit at 89% f1153/1155 (99.8%) over 1161bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f571/573 (99.7%) over 576bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1012/1031 (98.2%) over 1034bp for offset 0 <== THIS IS REAL YLR191W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR191W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2290 (0.3%). Conflicting: 10/2290 (0.4%). NoInfo: 11/2290 (0.5%). Certain keep: 2261/2290 (98.7%) ########################## YLR192C (798bp = 266AA) has 9 hits (HCR1) High Copy suppressor of RPG1 Spar (test2) orthologous hit at 92% f798/798 (100.0%) over 798bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 58% f82/213 (38.5%) over 223bp for offset 0 Smik (test3) Longest island has f74 at 57% over 53bp Sbay (test2) orthologous hit at 85% f786/796 (98.7%) over 798bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 798 |__________|__________|__________|___________|__________|__________|__________|___________| 100f 74f 57% 572f 6100f 100f 57% 21bp Sm740full |=>..|xxxxx>..|oo>.|===>|o> | YLR192C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR192C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2291 (0.3%). Conflicting: 10/2291 (0.4%). NoInfo: 11/2291 (0.5%). Certain keep: 2262/2291 (98.7%) ########################## YLR195C (1368bp = 456AA) has 7 hits (NMT1) N-myristoyl transferase Spar (test2) orthologous hit at 91% f1368/1368 (100.0%) over 1368bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f864/864 (100.0%) over 864bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f525/525 (100.0%) over 525bp for offset 0 <== THIS IS REAL YLR195C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR195C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2292 (0.3%). Conflicting: 10/2292 (0.4%). NoInfo: 11/2292 (0.5%). Certain keep: 2263/2292 (98.7%) ########################## YLR196W (1731bp = 577AA) has 37 hits (PWP1) similar to beta-transducin superfamily Spar (test2) orthologous hit at 90% f1731/1731 (100.0%) over 1731bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f638/638 (100.0%) over 638bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1597/1597 (100.0%) over 1597bp for offset 0 <== THIS IS REAL YLR196W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR196W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2293 (0.3%). Conflicting: 10/2293 (0.4%). NoInfo: 11/2293 (0.5%). Certain keep: 2264/2293 (98.7%) ########################## YLR197W (1515bp = 505AA) has 511 hits (SIK1) homology to microtubule binding pro..0565_5.cds (105) Flanking ORFs are: YLR195C and YLR197W. YLR197W skipped ########################## YLR200W (345bp = 115AA) has 17 hits (YKE2) Polypeptide 6 of a Yeast Non-native A..BC complex (151) Spar (test2) orthologous hit at 90% f345/345 (100.0%) over 345bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f345/345 (100.0%) over 345bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f345/345 (100.0%) over 345bp for offset 0 <== THIS IS REAL YLR200W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR200W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2294 (0.3%). Conflicting: 10/2294 (0.4%). NoInfo: 11/2294 (0.5%). Certain keep: 2265/2294 (98.7%) ########################## YLR203C (1311bp = 437AA) has 6 hits (MSS51) involved in maturation of COX1 and COB mRNA Spar (test2) non-orthologous hit at 90% f1311/1311 (100.0%) over 1311bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f237/237 (100.0%) over 237bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1306/1310 (99.7%) over 1311bp for offset 0 <== THIS IS REAL YLR203C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR203C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2295 (0.3%). Conflicting: 10/2295 (0.4%). NoInfo: 11/2295 (0.5%). Certain keep: 2266/2295 (98.7%) ########################## YLR204W (336bp = 112AA) has 74 hits (QRI5) Product of gene unknown Spar (test2) orthologous hit at 86% f248/301 (82.4%) over 305bp for offset 0 Spar (test3) Longest island has f98 at 90% over 209bp Smik (test2) non-orthologous hit at 85% f336/336 (100.0%) over 336bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f333/336 (99.1%) over 336bp for offset 0 <== THIS IS REAL 0 100 200 300 336 |_________________________|__________________________|__________________________|_________| 98f 90% 209bp Sp139brk |.........................|=======================================================| YLR204W: kill: - keep: Smik Sbay Not a single protein hit, and yet, certain keep YLR204W - Certain Keep. Kill and Keep Smik Sbay Current total: Certain kills: 8/2296 (0.3%). Conflicting: 10/2296 (0.4%). NoInfo: 11/2296 (0.5%). Certain keep: 2267/2296 (98.7%) ########################## YLR205C (822bp = 274AA) has 6 hits (HMX1) Putative heme oxygenase Spar (test2) orthologous hit at 90% f822/822 (100.0%) over 822bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f561/675 (83.1%) over 675bp for offset 1 Smik (test3) Longest island has f99 at 87% over 565bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f820/822 (99.8%) over 822bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800822 |_________|__________|__________|__________|__________|__________|__________|__________|__| 99f 87% 565bp Sm51brk |...........|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo| YLR205C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR205C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2297 (0.3%). Conflicting: 10/2297 (0.4%). NoInfo: 11/2297 (0.5%). Certain keep: 2268/2297 (98.7%) ########################## YLR206W (1842bp = 614AA) has 1185 hits (ENT2) Ent2p Spar (test2) orthologous hit at 76% f1000/1141 (87.6%) over 1166bp for offset 0 Spar (test3) Longest island has f97 at 86% over 818bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f1588/1651 (96.2%) over 1667bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f1046/1335 (78.4%) over 1376bp for offset 0 Sbay (test3) Longest island has f98 at 84% over 504bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|____|____|____|____|____|____|___|____|____|____|____|____|____|____|____|___|__| 97f 86% 818bp Sp141brk |.................|=======================================> | 98f 84% 504bp 93f 78% 275bp Sb322full |=======================>........................|============>....> | YLR206W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR206W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2298 (0.3%). Conflicting: 10/2298 (0.4%). NoInfo: 11/2298 (0.5%). Certain keep: 2269/2298 (98.7%) ########################## YLR207W (2502bp = 834AA) has 8 hits (HRD3) involved in HMG-CoA reductase degradation Spar (test2) orthologous hit at 89% f2493/2495 (99.9%) over 2502bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2419/2439 (99.2%) over 2445bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2189/2229 (98.2%) over 2239bp for offset 0 <== THIS IS REAL YLR207W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR207W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2299 (0.3%). Conflicting: 10/2299 (0.4%). NoInfo: 11/2299 (0.5%). Certain keep: 2270/2299 (98.7%) ########################## YLR208W (894bp = 298AA) has 8 hits (SEC13) cytoplasmic protein involved in relea..rom the ER (116) Spar (test2) orthologous hit at 92% f890/893 (99.7%) over 894bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f894/894 (100.0%) over 894bp for offset 0 <== THIS IS REAL YLR208W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR208W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2300 (0.3%). Conflicting: 10/2300 (0.4%). NoInfo: 11/2300 (0.5%). Certain keep: 2271/2300 (98.7%) ########################## YLR209C (936bp = 312AA) has 5 hits (PNP1) Spar (test2) orthologous hit at 90% f936/936 (100.0%) over 936bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f763/763 (100.0%) over 763bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f926/934 (99.1%) over 935bp for offset 0 <== THIS IS REAL YLR209C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR209C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2301 (0.3%). Conflicting: 10/2301 (0.4%). NoInfo: 11/2301 (0.5%). Certain keep: 2272/2301 (98.7%) ########################## YLR210W (1383bp = 461AA) has 28 hits (CLB4) G(sub)2-specific B-type cyclin Spar (test2) orthologous hit at 88% f1378/1380 (99.9%) over 1383bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f955/965 (99.0%) over 968bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1078/1095 (98.4%) over 1103bp for offset 0 <== THIS IS REAL YLR210W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR210W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2302 (0.3%). Conflicting: 10/2302 (0.4%). NoInfo: 11/2302 (0.5%). Certain keep: 2273/2302 (98.7%) ########################## YLR212C (1422bp = 474AA) has 14 hits (TUB4) gamma tubulin-like protein, interact.. pole body (209) Spar (test2) orthologous hit at 91% f960/975 (98.5%) over 977bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 84% f307/307 (100.0%) over 307bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1419/1421 (99.9%) over 1422bp for offset 0 <== THIS IS REAL YLR212C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR212C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2303 (0.3%). Conflicting: 10/2303 (0.4%). NoInfo: 11/2303 (0.5%). Certain keep: 2274/2303 (98.7%) ########################## YLR213C (1269bp = 423AA) has 9 hits (CRR1) CRH-Related Spar (test2) orthologous hit at 89% f1269/1269 (100.0%) over 1269bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1146/1146 (100.0%) over 1146bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1206/1250 (96.5%) over 1257bp for offset 0 <== THIS IS REAL YLR213C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR213C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2304 (0.3%). Conflicting: 10/2304 (0.4%). NoInfo: 11/2304 (0.5%). Certain keep: 2275/2304 (98.7%) ########################## YLR214W (2061bp = 687AA) has 11 hits (FRE1) Ferric (and cupric) reductase Spar (test2) orthologous hit at 90% f2061/2061 (100.0%) over 2061bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1104/1104 (100.0%) over 1104bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f503/508 (99.0%) over 509bp for offset 0 <== THIS IS REAL YLR214W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR214W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2305 (0.3%). Conflicting: 10/2305 (0.4%). NoInfo: 11/2305 (0.5%). Certain keep: 2276/2305 (98.7%) ########################## YLR215C (1083bp = 361AA) has 8 hits (CDC123) Product of gene unknown Spar (test2) orthologous hit at 90% f1083/1083 (100.0%) over 1083bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f877/877 (100.0%) over 877bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1072/1080 (99.3%) over 1082bp for offset 0 <== THIS IS REAL YLR215C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR215C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2306 (0.3%). Conflicting: 10/2306 (0.4%). NoInfo: 11/2306 (0.5%). Certain keep: 2277/2306 (98.7%) ########################## YLR216C (1116bp = 372AA) has 28 hits (CPR6) cyclophilin related to the mammalian CyP-40 Flanking ORFs are: YLR214W and YLR216C. YLR216C skipped ########################## YLR219W (2187bp = 729AA) has 14 hits (MSC3) Spar (test2) orthologous hit at 85% f2092/2127 (98.4%) over 2137bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1244/1291 (96.4%) over 1294bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1168/1190 (98.2%) over 1196bp for offset 1 <== THIS IS REAL YLR219W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR219W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2307 (0.3%). Conflicting: 10/2307 (0.4%). NoInfo: 11/2307 (0.5%). Certain keep: 2278/2307 (98.7%) ########################## YLR220W (969bp = 323AA) has 4 hits (CCC1) Possible transmembrane Ca2+ transporter Spar (test2) orthologous hit at 91% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f969/969 (100.0%) over 969bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f965/968 (99.7%) over 969bp for offset 0 <== THIS IS REAL YLR220W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR220W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2308 (0.3%). Conflicting: 10/2308 (0.4%). NoInfo: 11/2308 (0.5%). Certain keep: 2279/2308 (98.7%) ########################## YLR221C (663bp = 221AA) has 18 hits (RSA3) Hypothetical ORF Spar (test2) orthologous hit at 88% f663/663 (100.0%) over 663bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f356/378 (94.2%) over 380bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f496/604 (82.1%) over 610bp for offset 0 Sbay (test3) Longest island has f92 at 72% over 539bp <== THIS IS REAL 0 100 200 300 400 500 600 663 |____________|_____________|____________|_____________|____________|_____________|________| 92f 72% 539bp Sb320full |========================================================================>........>| YLR221C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR221C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2309 (0.3%). Conflicting: 10/2309 (0.4%). NoInfo: 11/2309 (0.5%). Certain keep: 2280/2309 (98.7%) ########################## YLR222C (2454bp = 818AA) has 22 hits (UTP13) Protein required for cell viability Spar (test2) orthologous hit at 89% f2449/2453 (99.8%) over 2454bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1418/1426 (99.4%) over 1428bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2439/2449 (99.6%) over 2452bp for offset 0 <== THIS IS REAL YLR222C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR222C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2310 (0.3%). Conflicting: 10/2310 (0.4%). NoInfo: 11/2310 (0.5%). Certain keep: 2281/2310 (98.7%) ########################## YLR223C (3258bp = 1086AA) has 1179 hits (IFH1) has a weak RNA-dependent ATPase a..c for rRNA (118) Spar (test2) orthologous hit at 75% f2089/2542 (82.2%) over 2586bp for offset 2 Spar (test3) Longest island has f98 at 88% over 1662bp <== THIS IS REAL Smik (test2) orthologous hit at 81% f408/414 (98.6%) over 415bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 63% f1626/2279 (71.3%) over 2367bp for offset 0 Sbay (test3) Longest island has f94 at 83% over 509bp <== THIS IS REAL 0 10020030040500600700809001k 1k 1k1k 1k 1k 1k1k 1k 1k 2k 2k2k 2k 2k 2k2k 2k 2k 2k3k 3k 3k3k |_|__|__|__|_|__|__|__|_|__|__|__|_|__|__|__|_|__|__|__|__|_|__|__|__|_|__|__|__|_|__|__|_| 98f 88% 1662bp Sp142full |............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>............> | 98f 80% 463bp 94f 83% 509bp Sb319brk |===========>.......................................|=============> | YLR223C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR223C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2311 (0.3%). Conflicting: 10/2311 (0.4%). NoInfo: 11/2311 (0.5%). Certain keep: 2282/2311 (98.7%) ########################## YLR226W (1188bp = 396AA) has 19 hits (BUR2) involved in transcriptional regulation Spar (test2) orthologous hit at 92% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f711/711 (100.0%) over 711bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1092/1186 (92.1%) over 1188bp for offset 1 <== THIS IS REAL YLR226W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR226W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2312 (0.3%). Conflicting: 10/2312 (0.4%). NoInfo: 11/2312 (0.5%). Certain keep: 2283/2312 (98.7%) ########################## YLR227C (1482bp = 494AA) has 28 hits (ADY4) Hypothetical ORF Spar (test2) orthologous hit at 88% f1477/1481 (99.7%) over 1482bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 54% f425/1018 (41.7%) over 1083bp for offset 0 Smik (test3) Longest island has f71 at 57% over 86bp Smik (test2) non-orthologous hit at 80% f566/648 (87.3%) over 650bp for offset 2 Smik (test3) Longest island has f99 at 81% over 573bp <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1472/1481 (99.4%) over 1482bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|_____|______|____| 67f 58% 57bp 79f 66% 76bp 81f 47% 47bp 83f 70f 571f 57% 86bpSm918full ||xx>.............|====>..................|xx>.........|==>|xxxx|oooo> | 99f 81% 573bp Sm1328brk |....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YLR227C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR227C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2313 (0.3%). Conflicting: 10/2313 (0.4%). NoInfo: 11/2313 (0.5%). Certain keep: 2284/2313 (98.7%) ########################## YLR228C (2445bp = 815AA) has 257 hits (ECM22) involved in cell wall biogenesis (putative) Spar (test2) orthologous hit at 89% f2106/2106 (100.0%) over 2106bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f1293/1297 (99.7%) over 1307bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2414/2433 (99.2%) over 2445bp for offset 0 <== THIS IS REAL YLR228C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR228C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2314 (0.3%). Conflicting: 10/2314 (0.4%). NoInfo: 11/2314 (0.5%). Certain keep: 2285/2314 (98.7%) ########################## YLR229C (576bp = 192AA) has 20 hits (CDC42) member of the Rho subfamily of Ras-l..e proteins (92) Flanking ORFs are: YLR227W-B and YLR229C. YLR229C skipped ########################## YLR231C (1362bp = 454AA) has 8 hits (BNA5) YLR231C Flanking ORFs are: YLR227W-B and YLR229C. YLR231C skipped ########################## YLR233C (2100bp = 700AA) has 16 hits (EST1) involved in telomere length regulation Spar (test2) orthologous hit at 85% f2083/2095 (99.4%) over 2100bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1127/1183 (95.3%) over 1194bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1429/1525 (93.7%) over 1541bp for offset 0 <== THIS IS REAL YLR233C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR233C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2315 (0.3%). Conflicting: 10/2315 (0.4%). NoInfo: 11/2315 (0.5%). Certain keep: 2286/2315 (98.7%) ########################## YLR234W (1971bp = 657AA) has 20 hits (TOP3) DNA Topoisomerase III Flanking ORFs are: YLR232W and YLR234W. YLR234W skipped ########################## YLR237W (1797bp = 599AA) has 14 hits (THI7) thiamine transporter Spar (test2) orthologous hit at 91% f1797/1797 (100.0%) over 1797bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 83% f1797/1797 (100.0%) over 1797bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1773/1782 (99.5%) over 1784bp for offset 0 <== THIS IS REAL YLR237W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR237W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2316 (0.3%). Conflicting: 10/2316 (0.4%). NoInfo: 11/2316 (0.5%). Certain keep: 2287/2316 (98.7%) ########################## YLR239C (987bp = 329AA) has 10 hits (LIP2) Spar (test2) orthologous hit at 89% f987/987 (100.0%) over 987bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f922/930 (99.1%) over 932bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f979/985 (99.4%) over 987bp for offset 0 <== THIS IS REAL YLR239C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR239C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2317 (0.3%). Conflicting: 10/2317 (0.4%). NoInfo: 11/2317 (0.5%). Certain keep: 2288/2317 (98.7%) ########################## YLR240W (2628bp = 876AA) has 19 hits (VPS34) phosphatidylinositol 3-kinase Spar (test2) orthologous hit at 92% f2628/2628 (100.0%) over 2628bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f2628/2628 (100.0%) over 2628bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2597/2624 (99.0%) over 2628bp for offset 0 <== THIS IS REAL YLR240W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR240W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2318 (0.3%). Conflicting: 10/2318 (0.4%). NoInfo: 11/2318 (0.5%). Certain keep: 2289/2318 (98.7%) ########################## YLR242C (966bp = 322AA) has 17 hits (ARV1) similar to Nup120p and C.elegans R05H..nd Nup120p (103) Spar (test2) orthologous hit at 91% f961/965 (99.6%) over 966bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f966/966 (100.0%) over 966bp for offset 0 <== THIS IS REAL YLR242C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR242C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2319 (0.3%). Conflicting: 10/2319 (0.4%). NoInfo: 11/2319 (0.5%). Certain keep: 2290/2319 (98.7%) ########################## YLR244C (1164bp = 388AA) has 9 hits (MAP1) methionine aminopeptidase Spar (test2) orthologous hit at 91% f881/881 (100.0%) over 881bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f899/899 (100.0%) over 899bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1158/1163 (99.6%) over 1164bp for offset 0 <== THIS IS REAL YLR244C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR244C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2320 (0.3%). Conflicting: 10/2320 (0.4%). NoInfo: 11/2320 (0.5%). Certain keep: 2291/2320 (98.8%) ########################## YLR245C (429bp = 143AA) has 5 hits (CDD1) Cytidine deaminase Spar (test2) orthologous hit at 88% f429/429 (100.0%) over 429bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f429/429 (100.0%) over 429bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f429/429 (100.0%) over 429bp for offset 0 <== THIS IS REAL YLR245C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR245C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2321 (0.3%). Conflicting: 10/2321 (0.4%). NoInfo: 11/2321 (0.5%). Certain keep: 2292/2321 (98.8%) ########################## YLR246W (1080bp = 360AA) has 10 hits (ERF2) Mutation has an Effect on Ras Function Spar (test2) orthologous hit at 89% f1080/1080 (100.0%) over 1080bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f749/749 (100.0%) over 749bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1073/1079 (99.4%) over 1080bp for offset 0 <== THIS IS REAL YLR246W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR246W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2322 (0.3%). Conflicting: 10/2322 (0.4%). NoInfo: 11/2322 (0.5%). Certain keep: 2293/2322 (98.8%) ########################## YLR248W (1833bp = 611AA) has 36 hits (RCK2) Serine/threonine protein kinase Spar (test2) orthologous hit at 91% f1833/1833 (100.0%) over 1833bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1218/1228 (99.2%) over 1229bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1814/1827 (99.3%) over 1833bp for offset 0 <== THIS IS REAL YLR248W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR248W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2323 (0.3%). Conflicting: 10/2323 (0.4%). NoInfo: 11/2323 (0.5%). Certain keep: 2294/2323 (98.8%) ########################## YLR249W (3135bp = 1045AA) has 117 hits (YEF3) EF-3 (translational elongation factor 3) Spar (test2) orthologous hit at 96% f3135/3135 (100.0%) over 3135bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 94% f3135/3135 (100.0%) over 3135bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 92% f3131/3134 (99.9%) over 3135bp for offset 0 <== THIS IS REAL YLR249W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR249W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2324 (0.3%). Conflicting: 10/2324 (0.4%). NoInfo: 11/2324 (0.5%). Certain keep: 2295/2324 (98.8%) ########################## YLR250W (705bp = 235AA) has 12 hits (SSP120) secretory protein Spar (test2) orthologous hit at 92% f705/705 (100.0%) over 705bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f705/705 (100.0%) over 705bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f705/705 (100.0%) over 705bp for offset 0 <== THIS IS REAL YLR250W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR250W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2325 (0.3%). Conflicting: 10/2325 (0.4%). NoInfo: 11/2325 (0.5%). Certain keep: 2296/2325 (98.8%) ########################## YLR256W (4509bp = 1503AA) has 482 hits (HAP1) zinc-finger transcription factor o..omain type (128) Spar (test2) non-orthologous hit at 90% f4396/4397 (100.0%) over 4409bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 73% f902/1090 (82.8%) over 1114bp for offset 0 Smik (test3) Longest island has f99 at 84% over 546bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1809/3142 (57.6%) over 3157bp for offset 0 Sbay (test3) Longest island has f98 at 84% over 1346bp <== THIS IS REAL 01020304050607080901k1k1k1k1k1k1k1k1k1k2k2k2k2k2k2k2k2k2k2k3k3k3k3k3k3k3k3k3k3k4k4k4k4k4k44k ||_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|| 99f 84% 546bp 100f 82% 261bp Sm972brk |==========>.....|====> | 99f 82% 1258bp 98f 84% 1346bp 100f 82% 551bSb316brk |========================|xxxxxxxxxxxxxxxxxxxxxxxxxx|==========> | YLR256W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR256W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2326 (0.3%). Conflicting: 10/2326 (0.4%). NoInfo: 11/2326 (0.5%). Certain keep: 2297/2326 (98.8%) ########################## YLR258W (2118bp = 706AA) has 10 hits (GSY2) Glycogen synthase (UDP-gluocse--star..ansferase) (103) Spar (test2) orthologous hit at 92% f2118/2118 (100.0%) over 2118bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f588/588 (100.0%) over 588bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2118/2118 (100.0%) over 2118bp for offset 0 <== THIS IS REAL YLR258W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR258W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2327 (0.3%). Conflicting: 10/2327 (0.4%). NoInfo: 11/2327 (0.5%). Certain keep: 2298/2327 (98.8%) ########################## YLR259C (1719bp = 573AA) has 7 hits (HSP60) mitochondrial chaperonin, homolog of..EL protein (102) Spar (test2) orthologous hit at 92% f1719/1719 (100.0%) over 1719bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 90% f892/892 (100.0%) over 892bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1719/1719 (100.0%) over 1719bp for offset 0 <== THIS IS REAL YLR259C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR259C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2328 (0.3%). Conflicting: 10/2328 (0.4%). NoInfo: 11/2328 (0.5%). Certain keep: 2299/2328 (98.8%) ########################## YLR260W (2064bp = 688AA) has 59 hits (LCB5) sphingoid long chain base (LCB) kinase Spar (test2) orthologous hit at 89% f1856/1865 (99.5%) over 1866bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f943/997 (94.6%) over 1000bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1817/1878 (96.8%) over 1887bp for offset 0 <== THIS IS REAL YLR260W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR260W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2329 (0.3%). Conflicting: 10/2329 (0.4%). NoInfo: 11/2329 (0.5%). Certain keep: 2300/2329 (98.8%) ########################## YLR261C (327bp = 109AA) has 12 hits (VPS63) Flanking ORFs are: YLR259C and YLR261C. YLR261C skipped ########################## YLR262C (648bp = 216AA) has 41 hits (YPT6) highly homologous to the human GTPase, Rab6 Flanking ORFs are: YLR259C and YLR261C. YLR262C skipped ########################## YLR263W (2484bp = 828AA) has 76 hits (RED1) Meiosis-specific protein involved in..in meiosis (228) Spar (test2) orthologous hit at 87% f1294/1302 (99.4%) over 1309bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f743/1041 (71.4%) over 1041bp for offset 2 Smik (test3) Longest island has f99 at 82% over 754bp <== THIS IS REAL Sbay (test2) orthologous hit at 66% f1744/2358 (74.0%) over 2420bp for offset 1 Sbay (test3) Longest island has f96 at 76% over 1410bp <== THIS IS REAL 0 100 200300 400 500600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k |__|___|__|___|___|__|___|__|___|___|__|___|___|__|___|__|___|___|__|___|___|__|___|__|___| 99f 82% 754bp 100f 78% 267bp Sm1342brk |===========================|oooooooo>> | 96f 76% 1410bp Sb315full |==================================================>...................................> | YLR263W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR263W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2330 (0.3%). Conflicting: 10/2330 (0.4%). NoInfo: 11/2330 (0.5%). Certain keep: 2301/2330 (98.8%) ########################## YLR264W (204bp = 68AA) has 11 hits (RPS28B) Ribosomal protein S28B (S33B) (YS27) Spar (test2) orthologous hit at 99% f204/204 (100.0%) over 204bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f204/204 (100.0%) over 204bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f204/204 (100.0%) over 204bp for offset 0 <== THIS IS REAL YLR264W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR264W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2331 (0.3%). Conflicting: 10/2331 (0.4%). NoInfo: 11/2331 (0.5%). Certain keep: 2302/2331 (98.8%) ########################## YLR265C (1029bp = 343AA) has 10 hits (NEJ1) Nonhomologous End-Joining regulator 1 Spar (test2) orthologous hit at 80% f1015/1026 (98.9%) over 1029bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 74% f936/959 (97.6%) over 966bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 65% f825/953 (86.6%) over 970bp for offset 0 Sbay (test3) Longest island has f93 at 71% over 555bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k |_______|________|________|_______|________|________|________|_______|________|________|__| 93f 71% 555bp Sb315full |.............|===============================================>.....................> | YLR265C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR265C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2332 (0.3%). Conflicting: 10/2332 (0.4%). NoInfo: 11/2332 (0.5%). Certain keep: 2303/2332 (98.8%) ########################## YLR267W (1713bp = 571AA) has 18 hits (BOP2) Bypass of PAM1 Spar (test2) orthologous hit at 89% f1713/1713 (100.0%) over 1713bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1223/1249 (97.9%) over 1251bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1667/1704 (97.8%) over 1713bp for offset 0 <== THIS IS REAL YLR267W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR267W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2333 (0.3%). Conflicting: 10/2333 (0.4%). NoInfo: 11/2333 (0.5%). Certain keep: 2304/2333 (98.8%) ########################## YLR268W (645bp = 215AA) has 5 hits (SEC22) Synaptobrevin (v-SNARE) homolog Spar (test2) orthologous hit at 93% f645/645 (100.0%) over 645bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f645/645 (100.0%) over 645bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f634/643 (98.6%) over 645bp for offset 0 <== THIS IS REAL YLR268W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR268W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2334 (0.3%). Conflicting: 10/2334 (0.4%). NoInfo: 11/2334 (0.5%). Certain keep: 2305/2334 (98.8%) ########################## YLR272C (3531bp = 1177AA) has 33 hits (YCS4) Loss of cohesion Spar (test2) orthologous hit at 89% f2063/2063 (100.0%) over 2063bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1067/1107 (96.4%) over 1108bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2047/2072 (98.8%) over 2078bp for offset 0 <== THIS IS REAL YLR272C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR272C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2335 (0.3%). Conflicting: 10/2335 (0.4%). NoInfo: 11/2335 (0.5%). Certain keep: 2306/2335 (98.8%) ########################## YLR273C (1947bp = 649AA) has 41 hits (PIG1) Protein similar to Gac1p, a putative..ng subunit (125) Spar (test2) orthologous hit at 80% f1817/1876 (96.9%) over 1889bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 71% f1731/1870 (92.6%) over 1895bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f1632/1727 (94.5%) over 1748bp for offset 1 <== THIS IS REAL YLR273C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR273C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2336 (0.3%). Conflicting: 10/2336 (0.4%). NoInfo: 11/2336 (0.5%). Certain keep: 2307/2336 (98.8%) ########################## YLR274W (2328bp = 776AA) has 37 hits (CDC46) MCM initiator complex protein Spar (test2) orthologous hit at 90% f1167/1207 (96.7%) over 1208bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1422/2328 (61.1%) over 2328bp for offset 1 Smik (test3) Longest island has f100 at 88% over 1422bp <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1278/1278 (100.0%) over 1278bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k2k |__|___|___|___|___|___|___|__|___|___|___|___|___|___|__|___|___|___|___|___|___|___|__|_| 100f 88% 1422bp 100f 89% 906bp Sm1349ful |======================================================|oooooooooooooooooooooooooooooooooo| YLR274W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR274W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2337 (0.3%). Conflicting: 10/2337 (0.4%). NoInfo: 11/2337 (0.5%). Certain keep: 2308/2337 (98.8%) ########################## YLR276C (1785bp = 595AA) has 85 hits (DBP9) putative RNA helicase Spar (test2) orthologous hit at 91% f1785/1785 (100.0%) over 1785bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f887/887 (100.0%) over 887bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1122/1138 (98.6%) over 1141bp for offset 0 <== THIS IS REAL YLR276C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR276C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2338 (0.3%). Conflicting: 10/2338 (0.4%). NoInfo: 11/2338 (0.5%). Certain keep: 2309/2338 (98.8%) ########################## YLR277C (2340bp = 780AA) has 20 hits (YSH1) subunit of Polyadenylation factor I (PF I) Spar (test2) orthologous hit at 91% f2339/2339 (100.0%) over 2339bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f918/1659 (55.3%) over 1665bp for offset 0 Smik (test3) Longest island has f99 at 86% over 930bp <== THIS IS REAL Sbay (test2) non-orthologous hit at 83% f2034/2046 (99.4%) over 2051bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k2k |__|___|___|___|___|___|__|___|___|___|___|___|___|__|___|___|___|___|___|__|___|___|___|_| 99f 86% 930bp 99f 84% 732bp Sm1350brk |==================================|oooooooooooooooooooooooooooo| YLR277C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR277C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2339 (0.3%). Conflicting: 10/2339 (0.4%). NoInfo: 11/2339 (0.5%). Certain keep: 2310/2339 (98.8%) ########################## YLR284C (843bp = 281AA) has 7 hits (ECI1) Peroxisomal d3,d2-Enoyl-CoA Isomerase Spar (test2) orthologous hit at 87% f843/843 (100.0%) over 843bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f555/555 (100.0%) over 555bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f823/827 (99.5%) over 829bp for offset 0 <== THIS IS REAL YLR284C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR284C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2340 (0.3%). Conflicting: 10/2340 (0.4%). NoInfo: 11/2340 (0.5%). Certain keep: 2311/2340 (98.8%) ########################## YLR286C (1689bp = 563AA) has 17 hits (CTS1) Endochitinase Spar (test2) orthologous hit at 89% f1034/1044 (99.0%) over 1045bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1020/1030 (99.0%) over 1031bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1117/1166 (95.8%) over 1178bp for offset 0 <== THIS IS REAL YLR286C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR286C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2341 (0.3%). Conflicting: 10/2341 (0.4%). NoInfo: 11/2341 (0.5%). Certain keep: 2312/2341 (98.8%) ########################## YLR288C (1425bp = 475AA) has 7 hits (MEC3) DNA damage checkpoint protein Spar (test2) orthologous hit at 91% f1422/1422 (100.0%) over 1425bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1406/1419 (99.1%) over 1424bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1404/1419 (98.9%) over 1425bp for offset 0 <== THIS IS REAL YLR288C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR288C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2342 (0.3%). Conflicting: 10/2342 (0.4%). NoInfo: 11/2342 (0.5%). Certain keep: 2313/2342 (98.8%) ########################## YLR289W (1938bp = 646AA) has 9 hits (GUF1) GTPase Spar (test2) orthologous hit at 91% f1938/1938 (100.0%) over 1938bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f658/658 (100.0%) over 658bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1649/1677 (98.3%) over 1678bp for offset 1 <== THIS IS REAL YLR289W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR289W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2343 (0.3%). Conflicting: 10/2343 (0.4%). NoInfo: 11/2343 (0.5%). Certain keep: 2314/2343 (98.8%) ########################## YLR291C (1146bp = 382AA) has 6 hits (GCD7) translation initiation factor eIF2b, ..expression (133) Spar (test2) orthologous hit at 92% f1146/1146 (100.0%) over 1146bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1141/1141 (100.0%) over 1141bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1141/1141 (100.0%) over 1141bp for offset 0 <== THIS IS REAL YLR291C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR291C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2344 (0.3%). Conflicting: 10/2344 (0.4%). NoInfo: 11/2344 (0.5%). Certain keep: 2315/2344 (98.8%) ########################## YLR292C (582bp = 194AA) has 5 hits (SEC72) protein involved in membrane protein ..nto the ER (101) Spar (test2) orthologous hit at 91% f582/582 (100.0%) over 582bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f582/582 (100.0%) over 582bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f582/582 (100.0%) over 582bp for offset 0 <== THIS IS REAL YLR292C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR292C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2345 (0.3%). Conflicting: 10/2345 (0.4%). NoInfo: 11/2345 (0.5%). Certain keep: 2316/2345 (98.8%) ########################## YLR293C (660bp = 220AA) has 29 hits (GSP1) GTP-binding protein Spar (test2) orthologous hit at 96% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 93% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 93% f660/660 (100.0%) over 660bp for offset 0 <== THIS IS REAL YLR293C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR293C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2346 (0.3%). Conflicting: 10/2346 (0.4%). NoInfo: 11/2346 (0.5%). Certain keep: 2317/2346 (98.8%) ########################## YLR295C (375bp = 125AA) has 4 hits (ATP14) ATP synthase subunit h Flanking ORFs are: YLR292C and YLR294C. YLR295C skipped ########################## YLR298C (696bp = 232AA) has 23 hits (YHC1) U1 snRNP protein Spar (test2) orthologous hit at 89% f691/694 (99.6%) over 695bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f696/696 (100.0%) over 696bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f667/692 (96.4%) over 696bp for offset 0 <== THIS IS REAL YLR298C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR298C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2347 (0.3%). Conflicting: 10/2347 (0.4%). NoInfo: 11/2347 (0.5%). Certain keep: 2318/2347 (98.8%) ########################## YLR299W (1983bp = 661AA) has 5 hits (ECM38) gamma-glutamyltransferase homolog Spar (test2) orthologous hit at 89% f1090/1983 (55.0%) over 1983bp for offset 1 Spar (test3) Longest island has f100 at 89% over 1090bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f1611/1622 (99.3%) over 1624bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1961/1979 (99.1%) over 1983bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|___|____|___|____|___|____|___|____|____|___|____|___|____|___|____|___| 100f 89% 1090bp 100f 90% 893bp Sp147full |================================================|oooooooooooooooooooooooooooooooooooooooo| YLR299W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR299W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2348 (0.3%). Conflicting: 10/2348 (0.4%). NoInfo: 11/2348 (0.5%). Certain keep: 2319/2348 (98.8%) ########################## YLR300W (1347bp = 449AA) has 11 hits (EXG1) Exo-1,3-beta-glucanase Spar (test2) orthologous hit at 93% f1347/1347 (100.0%) over 1347bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1342/1346 (99.7%) over 1347bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1342/1346 (99.7%) over 1347bp for offset 0 <== THIS IS REAL YLR300W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR300W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2349 (0.3%). Conflicting: 10/2349 (0.4%). NoInfo: 11/2349 (0.5%). Certain keep: 2320/2349 (98.8%) ########################## YLR303W (1335bp = 445AA) has 10 hits (MET17) O-Acetylhomoserine-O-Acetylserine S..fhydralase (92) Flanking ORFs are: YLR299W and YLR301W. YLR303W skipped ########################## YLR304C (2337bp = 779AA) has 18 hits (ACO1) Aconitase, mitochondrial Spar (test2) orthologous hit at 93% f1204/1213 (99.3%) over 1216bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 68% f1033/1140 (90.6%) over 1157bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f2330/2330 (100.0%) over 2330bp for offset 0 <== THIS IS REAL YLR304C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR304C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2350 (0.3%). Conflicting: 10/2350 (0.4%). NoInfo: 11/2350 (0.5%). Certain keep: 2321/2350 (98.8%) ########################## YLR305C (5703bp = 1901AA) has 24 hits (STT4) encodes a phosphatidylinositol-4-ki..s to VPC34 (105) Spar (test2) non-orthologous hit at 90% f5703/5703 (100.0%) over 5703bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f4720/4725 (99.9%) over 4726bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3143/3275 (96.0%) over 3287bp for offset 0 <== THIS IS REAL YLR305C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR305C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2351 (0.3%). Conflicting: 10/2351 (0.4%). NoInfo: 11/2351 (0.5%). Certain keep: 2322/2351 (98.8%) ########################## YLR307W (906bp = 302AA) has 8 hits (CDA1) Chitin Deacetylase Spar (test2) orthologous hit at 89% f906/906 (100.0%) over 906bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 66% f678/725 (93.5%) over 731bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f899/903 (99.6%) over 904bp for offset 0 <== THIS IS REAL YLR307W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR307W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2352 (0.3%). Conflicting: 10/2352 (0.4%). NoInfo: 11/2352 (0.5%). Certain keep: 2323/2352 (98.8%) ########################## YLR308W (939bp = 313AA) has 7 hits (CDA2) Chitin Deacetylase Spar (test2) orthologous hit at 90% f939/939 (100.0%) over 939bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 65% f735/783 (93.9%) over 792bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f919/934 (98.4%) over 938bp for offset 0 <== THIS IS REAL YLR308W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR308W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2353 (0.3%). Conflicting: 10/2353 (0.4%). NoInfo: 11/2353 (0.5%). Certain keep: 2324/2353 (98.8%) ########################## YLR309C (2736bp = 912AA) has 223 hits (IMH1) Product of gene unknown Spar (test2) orthologous hit at 87% f2735/2736 (100.0%) over 2736bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 71% f475/549 (86.5%) over 560bp for offset 0 Smik (test3) Longest island has f97 at 78% over 420bp <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1874/1895 (98.9%) over 1901bp for offset 0 <== THIS IS REAL 0 100200300 400500600 7008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k2k |__|__|__|___|__|__|___|__|__|__|___|__|__|___|__|__|__|___|__|__|___|__|__|__|___|__|__|_| 97f 78% 420bp Sm963brk |============>....> | YLR309C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR309C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2354 (0.3%). Conflicting: 10/2354 (0.4%). NoInfo: 11/2354 (0.5%). Certain keep: 2325/2354 (98.8%) ########################## YLR310C (4770bp = 1590AA) has 78 hits (CDC25) regulatory protein of adenylate cyclase Spar (test2) orthologous hit at 90% f4765/4767 (100.0%) over 4770bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1460/1463 (99.8%) over 1464bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 81% f3561/3690 (96.5%) over 3711bp for offset 1 <== THIS IS REAL YLR310C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR310C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2355 (0.3%). Conflicting: 10/2355 (0.4%). NoInfo: 11/2355 (0.5%). Certain keep: 2326/2355 (98.8%) ########################## YLR313C (1593bp = 531AA) has 10 hits (SPH1) homologous to Spa2p, localizes to si..zed growth (103) Spar (test2) orthologous hit at 81% f1567/1589 (98.6%) over 1593bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 70% f511/544 (93.9%) over 556bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 66% f1380/1561 (88.4%) over 1593bp for offset 0 Sbay (test3) Longest island has f94 at 71% over 1060bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k |____|_____|____|_____|_____|____|_____|_____|____|_____|_____|____|_____|_____|____|_____| 94f 71% 1060bp 88f 64% 357bp Sb307full |==========================================================>...........|==================|> YLR313C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR313C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2356 (0.3%). Conflicting: 10/2356 (0.4%). NoInfo: 11/2356 (0.5%). Certain keep: 2327/2356 (98.8%) ########################## YLR314C (1563bp = 521AA) has 52 hits (CDC3) Septin; component of 10 nm filaments..r-bud neck (99) Spar (test2) orthologous hit at 87% f1146/1186 (96.6%) over 1193bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f833/860 (96.9%) over 865bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1122/1152 (97.4%) over 1160bp for offset 2 <== THIS IS REAL YLR314C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR314C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2357 (0.3%). Conflicting: 10/2357 (0.4%). NoInfo: 11/2357 (0.5%). Certain keep: 2328/2357 (98.8%) ########################## YLR315W (462bp = 154AA) has 4 hits (NKP2) Hypothetical ORF Flanking ORFs are: YLR313C and YLR315W. YLR315W skipped ########################## YLR317W (435bp = 145AA) has 7 hits (KRE34) Hypothetical ORF Flanking ORFs are: YLR313C and YLR315W. YLR317W skipped ########################## YLR318W (2655bp = 885AA) has 60 hits (EST2) 103 kD basic protein, catalytic subu..telomerase (97) Spar (test2) orthologous hit at 87% f2622/2644 (99.2%) over 2654bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f1978/2646 (74.8%) over 2653bp for offset 1 Smik (test3) Longest island has f98 at 81% over 1966bp <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2572/2635 (97.6%) over 2646bp for offset 0 <== THIS IS REAL 0 100200 300400500 600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k2k |__|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|___|__|__|___|__|__|___|__|___|_| 100f 79% 601bp 98f 81% 1966bp Sm958full |.|ooooooooooooooooooo|==================================================================>| YLR318W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR318W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2358 (0.3%). Conflicting: 10/2358 (0.4%). NoInfo: 11/2358 (0.5%). Certain keep: 2329/2358 (98.8%) ########################## YLR319C (2367bp = 789AA) has 12 hits (BUD6) Actin Interacting Protein Spar (test2) orthologous hit at 88% f2350/2359 (99.6%) over 2360bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f819/830 (98.7%) over 831bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1388/1488 (93.3%) over 1497bp for offset 1 <== THIS IS REAL YLR319C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR319C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2359 (0.3%). Conflicting: 10/2359 (0.4%). NoInfo: 11/2359 (0.5%). Certain keep: 2330/2359 (98.8%) ########################## YLR320W (4365bp = 1455AA) has 27 hits (MMS22) Spar (test2) orthologous hit at 86% f3659/4361 (83.9%) over 4365bp for offset 0 Spar (test3) Longest island has f99 at 86% over 3688bp <== THIS IS REAL Smik (test2) orthologous hit at 81% f1685/1692 (99.6%) over 1694bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f4180/4334 (96.4%) over 4365bp for offset 0 <== THIS IS REAL 0 1020304050607080901k1k1k1k1k1k1k 1k1k1k2k2k2k2k2k2k2k2k2k2k3k3k3k 3k3k3k3k3k3k3k4k4k4k4k4k |_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|_|_|_|_|_|_|__|_|_|_|_|_|_|_|_|_|_|_| 99f 86% 684bp 99f 86% 3688bp Sp148full |=============|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YLR320W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR320W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2360 (0.3%). Conflicting: 10/2360 (0.4%). NoInfo: 11/2360 (0.5%). Certain keep: 2331/2360 (98.8%) ########################## YLR321C (1281bp = 427AA) has 16 hits (SFH1) homolog of Snf5p, member of the chro..mplex, RSC (109) Flanking ORFs are: YLR319C and YLR321C. YLR321C skipped ########################## YLR322W (315bp = 105AA) has 11 hits (VPS65) Flanking ORFs are: YLR319C and YLR321C. YLR322W skipped ########################## YLR323C (780bp = 260AA) has 6 hits (CWC24) Protein required for cell viability Spar (test2) orthologous hit at 87% f780/780 (100.0%) over 780bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 79% f777/779 (99.7%) over 780bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f736/766 (96.1%) over 773bp for offset 0 <== THIS IS REAL YLR323C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR323C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2361 (0.3%). Conflicting: 10/2361 (0.4%). NoInfo: 11/2361 (0.5%). Certain keep: 2332/2361 (98.8%) ########################## YLR325C (237bp = 79AA) has 13 hits (RPL38) Ribosomal protein L38 Spar (test2) orthologous hit at 98% f237/237 (100.0%) over 237bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 97% f237/237 (100.0%) over 237bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 98% f237/237 (100.0%) over 237bp for offset 0 <== THIS IS REAL YLR325C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR325C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2362 (0.3%). Conflicting: 10/2362 (0.4%). NoInfo: 11/2362 (0.5%). Certain keep: 2333/2362 (98.8%) ########################## YLR328W (1206bp = 402AA) has 14 hits (NMA1) nicotinic acid mononucleotide adenyl..ransferase (93) Spar (test2) orthologous hit at 92% f1202/1206 (99.7%) over 1206bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1205/1206 (99.9%) over 1206bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1062/1136 (93.5%) over 1144bp for offset 0 <== THIS IS REAL YLR328W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR328W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2363 (0.3%). Conflicting: 10/2363 (0.4%). NoInfo: 11/2363 (0.5%). Certain keep: 2334/2363 (98.8%) ########################## YLR329W (603bp = 201AA) has 7 hits (REC102) 23 kDa protein containing a putative..porulation (173) Spar (test2) orthologous hit at 89% f603/603 (100.0%) over 603bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f573/601 (95.3%) over 602bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f593/600 (98.8%) over 603bp for offset 0 <== THIS IS REAL YLR329W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR329W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2364 (0.3%). Conflicting: 10/2364 (0.4%). NoInfo: 11/2364 (0.5%). Certain keep: 2335/2364 (98.8%) ########################## YLR330W (2016bp = 672AA) has 65 hits (CHS5) involved in cell wall biogenesis Spar (test2) orthologous hit at 80% f1653/1733 (95.4%) over 1748bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f880/880 (100.0%) over 880bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f1312/1436 (91.4%) over 1460bp for offset 0 <== THIS IS REAL YLR330W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR330W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2365 (0.3%). Conflicting: 10/2365 (0.4%). NoInfo: 11/2365 (0.5%). Certain keep: 2336/2365 (98.8%) ########################## YLR332W (1131bp = 377AA) has 233 hits (MID2) Protein required for mating Flanking ORFs are: YLR329W and YLR331C. YLR332W skipped ########################## YLR333C (327bp = 109AA) has 10 hits (RPS25B) Ribosomal protein S25B (S31B) (rp45) (YS23) Spar (test2) orthologous hit at 95% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 93% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 91% f327/327 (100.0%) over 327bp for offset 0 <== THIS IS REAL YLR333C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR333C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2366 (0.3%). Conflicting: 10/2366 (0.4%). NoInfo: 11/2366 (0.5%). Certain keep: 2337/2366 (98.8%) ########################## YLR335W (2163bp = 721AA) has 27 hits (NUP2) nuclear pore complex protein with ce..1 and NUP1 (136) Spar (test2) orthologous hit at 85% f1386/1391 (99.6%) over 1395bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 77% f2044/2100 (97.3%) over 2115bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f717/781 (91.8%) over 787bp for offset 1 <== THIS IS REAL YLR335W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR335W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2367 (0.3%). Conflicting: 10/2367 (0.4%). NoInfo: 11/2367 (0.5%). Certain keep: 2338/2367 (98.8%) ########################## YLR336C (2700bp = 900AA) has 27 hits (SGD1) may be involved in high osmolarity s..ng pathway (96) Spar (test2) orthologous hit at 88% f2687/2698 (99.6%) over 2700bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f414/426 (97.2%) over 428bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2363/2426 (97.4%) over 2440bp for offset 1 <== THIS IS REAL YLR336C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR336C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2368 (0.3%). Conflicting: 10/2368 (0.4%). NoInfo: 11/2368 (0.5%). Certain keep: 2339/2368 (98.8%) ########################## YLR337C (2454bp = 818AA) has 35 hits (VRP1) Proline-rich protein verprolin Flanking ORFs are: YLR335W and YLR337C. YLR337C skipped ########################## YLR338W (858bp = 286AA) has 7 hits (KRE21) Hypothetical ORF Flanking ORFs are: YLR335W and YLR337C. YLR338W skipped ########################## YLR340W (939bp = 313AA) has 47 hits (RPP0) 60S ribosomal protein P0 (A0) (L10E) Flanking ORFs are: YLR335W and YLR337C. YLR340W skipped ########################## YLR341W (1434bp = 478AA) has 16 hits (SPO77) Hypothetical ORF Spar (test2) orthologous hit at 79% f1297/1352 (95.9%) over 1362bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 64% f166/209 (79.4%) over 217bp for offset 0 Smik (test3) Longest island has f80 at 66% over 108bp Sbay (test2) orthologous hit at 69% f966/1016 (95.1%) over 1024bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|______|_____|_____|_____|______|_____|_____|______|_____|_____|_____|__| 100f 6980f 66% 108bp Sm897brk |===>|>|======> | YLR341W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR341W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2369 (0.3%). Conflicting: 10/2369 (0.4%). NoInfo: 11/2369 (0.5%). Certain keep: 2340/2369 (98.8%) ########################## YLR342W (5631bp = 1877AA) has 39 hits (FKS1) 1,3-beta-D-glucan synthase Spar (test2) orthologous hit at 91% f3264/3264 (100.0%) over 3264bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 81% f5203/5239 (99.3%) over 5245bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f2502/2807 (89.1%) over 2812bp for offset 0 Sbay (test3) Longest island has f99 at 85% over 2520bp <== THIS IS REAL 0102304506078091k1k11k11k1k11k12k2k22k22k2k22k23k3k33k33k3k33k34k4k44k44k4k44k45k5k55k55k55k ||_||_||_|_||_||_|_||_||_|_||_||_|_||_||_|_||_||_|_||_||_|_||_||_|_||_||_|_||_||_|_||_||_|| 100f99f 85% 2520bp Sb303brk |===|oooooooooooooooooooooooooooooooooooooooo| YLR342W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR342W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2370 (0.3%). Conflicting: 10/2370 (0.4%). NoInfo: 11/2370 (0.5%). Certain keep: 2341/2370 (98.8%) ########################## YLR347C (2586bp = 862AA) has 4 hits (KAP95) 95 kDa structural and functional hom..portin 90) (129) Spar (test2) orthologous hit at 92% f2586/2586 (100.0%) over 2586bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2586/2586 (100.0%) over 2586bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1763/2586 (68.2%) over 2586bp for offset 0 Sbay (test3) Longest island has f100 at 85% over 1763bp <== THIS IS REAL 0 100200 300400 500600 700800 9001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k |__|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__|___|__| 100f 85% 1763bp 100f 85% 823bp Sb303full |============================================================|oooooooooooooooooooooooooooo| YLR347C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR347C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2371 (0.3%). Conflicting: 10/2371 (0.4%). NoInfo: 11/2371 (0.5%). Certain keep: 2342/2371 (98.8%) ########################## YLR348C (897bp = 299AA) has 3 hits (DIC1) mitochondrial dicarboxylate transport protein Flanking ORFs are: YLR346C and YLR348C. YLR348C skipped ########################## YLR350W (651bp = 217AA) has 7 hits (ORM2) Endoplasmic reticulum membrane-anchored protein Spar (test2) orthologous hit at 90% f651/651 (100.0%) over 651bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f647/647 (100.0%) over 647bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f636/647 (98.3%) over 649bp for offset 0 <== THIS IS REAL YLR350W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR350W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2372 (0.3%). Conflicting: 10/2372 (0.4%). NoInfo: 11/2372 (0.5%). Certain keep: 2343/2372 (98.8%) ########################## YLR351C (876bp = 292AA) has 5 hits (NIT3) nitrilase superfamily member Spar (test2) orthologous hit at 91% f876/876 (100.0%) over 876bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f876/876 (100.0%) over 876bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f867/875 (99.1%) over 876bp for offset 0 <== THIS IS REAL YLR351C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR351C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2373 (0.3%). Conflicting: 10/2373 (0.4%). NoInfo: 11/2373 (0.5%). Certain keep: 2344/2373 (98.8%) ########################## YLR353W (1812bp = 604AA) has 7 hits (BUD8) involved in bud site selection Spar (test2) orthologous hit at 87% f1799/1809 (99.4%) over 1812bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1699/1735 (97.9%) over 1742bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f999/1038 (96.2%) over 1045bp for offset 0 <== THIS IS REAL YLR353W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR353W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2374 (0.3%). Conflicting: 10/2374 (0.4%). NoInfo: 11/2374 (0.5%). Certain keep: 2345/2374 (98.8%) ########################## YLR354C (1008bp = 336AA) has 9 hits (TAL1) Transaldolase, enzyme in the pentose ..te pathway (97) Spar (test2) orthologous hit at 93% f1008/1008 (100.0%) over 1008bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f562/589 (95.4%) over 589bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1008/1008 (100.0%) over 1008bp for offset 0 <== THIS IS REAL YLR354C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR354C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2375 (0.3%). Conflicting: 10/2375 (0.4%). NoInfo: 11/2375 (0.5%). Certain keep: 2346/2375 (98.8%) ########################## YLR355C (1188bp = 396AA) has 4 hits (ILV5) acetohydroxyacid reductoisomerase Spar (test2) orthologous hit at 97% f1184/1187 (99.7%) over 1188bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 94% f977/987 (99.0%) over 989bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 94% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL YLR355C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR355C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2376 (0.3%). Conflicting: 10/2376 (0.4%). NoInfo: 11/2376 (0.5%). Certain keep: 2347/2376 (98.8%) ########################## YLR357W (2670bp = 890AA) has 30 hits (RSC2) Member of RSC complex. Flanking ORFs are: YLR354C and YLR356W. YLR357W skipped ########################## YLR359W (1449bp = 483AA) has 7 hits (ADE13) Adenylosuccinate Lyase Spar (test2) orthologous hit at 91% f1448/1448 (100.0%) over 1448bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1340/1340 (100.0%) over 1340bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1448/1448 (100.0%) over 1448bp for offset 0 <== THIS IS REAL YLR359W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR359W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2377 (0.3%). Conflicting: 10/2377 (0.4%). NoInfo: 11/2377 (0.5%). Certain keep: 2348/2377 (98.8%) ########################## YLR360W (1320bp = 440AA) has 16 hits (VPS38) involved in vacuolar protein targeting Flanking ORFs are: YLR358C and YLR360W. YLR360W skipped ########################## YLR362W (2154bp = 718AA) has 92 hits (STE11) Ser/Thr protein kinase; MEKK homolog Spar (test2) orthologous hit at 90% f2154/2154 (100.0%) over 2154bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1416/1420 (99.7%) over 1424bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f737/737 (100.0%) over 737bp for offset 0 <== THIS IS REAL YLR362W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR362W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2378 (0.3%). Conflicting: 10/2378 (0.4%). NoInfo: 11/2378 (0.5%). Certain keep: 2349/2378 (98.8%) ########################## YLR363C (657bp = 219AA) has 21 hits (NMD4) putative Upf1p-interacting protein Spar (test2) orthologous hit at 90% f657/657 (100.0%) over 657bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f527/527 (100.0%) over 527bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f657/657 (100.0%) over 657bp for offset 0 <== THIS IS REAL YLR363C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR363C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2379 (0.3%). Conflicting: 10/2379 (0.4%). NoInfo: 11/2379 (0.5%). Certain keep: 2350/2379 (98.8%) ########################## YLR368W (1797bp = 599AA) has 8 hits (FLM1) Spar (test2) orthologous hit at 88% f1797/1797 (100.0%) over 1797bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1796/1796 (100.0%) over 1796bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1772/1791 (98.9%) over 1796bp for offset 0 <== THIS IS REAL YLR368W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR368W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2380 (0.3%). Conflicting: 10/2380 (0.4%). NoInfo: 11/2380 (0.5%). Certain keep: 2351/2380 (98.8%) ########################## YLR369W (1974bp = 658AA) has 76 hits (SSQ1) mitochondrial hsp70-type molecular chaperone Spar (test2) orthologous hit at 89% f1974/1974 (100.0%) over 1974bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1969/1973 (99.8%) over 1974bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1970/1970 (100.0%) over 1970bp for offset 0 <== THIS IS REAL YLR369W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR369W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2381 (0.3%). Conflicting: 10/2381 (0.4%). NoInfo: 11/2381 (0.5%). Certain keep: 2352/2381 (98.8%) ########################## YLR370C (537bp = 179AA) has 4 hits (ARC18) Arp2/3 Complex Subunit Spar (test2) orthologous hit at 92% f537/537 (100.0%) over 537bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f478/537 (89.0%) over 537bp for offset 0 Smik (test3) Longest island has f100 at 88% over 478bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f529/530 (99.8%) over 536bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 537 |_______________|________________|________________|________________|_______________|______| 100f 88% 478bp Sm1173ful |===============================================================================>.........| YLR370C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR370C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2382 (0.3%). Conflicting: 10/2382 (0.4%). NoInfo: 11/2382 (0.5%). Certain keep: 2353/2382 (98.8%) ########################## YLR371W (4071bp = 1357AA) has 196 hits (ROM2) GDP-GTP Exchange Protein (GEP) for Rho1p Spar (test2) orthologous hit at 88% f3253/3341 (97.4%) over 3358bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2135/3332 (64.1%) over 3345bp for offset 0 Smik (test3) Longest island has f100 at 88% over 2089bp <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3233/3329 (97.1%) over 3349bp for offset 0 <== THIS IS REAL 0 102030400506070809001k1k1k1k1k 1k1k1k1k 1k2k2k2k2k 2k2k2k2k2k 2k3k3k3k3k 3k3k3k3k 3k3k4k4k |_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_| 99f 84% 1052bp 100f 88% 2089bp Sm1173ful |...|======================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YLR371W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR371W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2383 (0.3%). Conflicting: 10/2383 (0.4%). NoInfo: 11/2383 (0.5%). Certain keep: 2354/2383 (98.8%) ########################## YLR372W (1038bp = 346AA) has 22 hits (SUR4) involved in fatty acid biosynthesis Spar (test2) orthologous hit at 92% f1037/1037 (100.0%) over 1037bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1032/1037 (99.5%) over 1038bp for offset 0 <== THIS IS REAL YLR372W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR372W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2384 (0.3%). Conflicting: 10/2384 (0.4%). NoInfo: 11/2384 (0.5%). Certain keep: 2355/2384 (98.8%) ########################## YLR373C (2706bp = 902AA) has 66 hits (VID22) vacuole import and degradation Spar (test2) orthologous hit at 90% f2705/2705 (100.0%) over 2705bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2689/2704 (99.4%) over 2706bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1852/1935 (95.7%) over 1951bp for offset 0 <== THIS IS REAL YLR373C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR373C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2385 (0.3%). Conflicting: 10/2385 (0.4%). NoInfo: 11/2385 (0.5%). Certain keep: 2356/2385 (98.8%) ########################## YLR375W (1032bp = 344AA) has 12 hits (STP3) Involved in pre-tRNA splicing Flanking ORFs are: YLR372W and YLR374C. YLR375W skipped ########################## YLR377C (1047bp = 349AA) has 5 hits (FBP1) fructose-1,6-bisphosphatase Spar (test2) orthologous hit at 91% f1046/1046 (100.0%) over 1046bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f1047/1047 (100.0%) over 1047bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1041/1045 (99.6%) over 1046bp for offset 0 <== THIS IS REAL YLR377C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR377C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2386 (0.3%). Conflicting: 10/2386 (0.4%). NoInfo: 11/2386 (0.5%). Certain keep: 2357/2386 (98.8%) ########################## YLR378C (1443bp = 481AA) has 7 hits (SEC61) membrane component of ER protein tra.. apparatus (100) Flanking ORFs are: YLR376C and YLR378C. YLR378C skipped ########################## YLR380W (1227bp = 409AA) has 6 hits (CSR1) chs5 spa2 rescue; isolated as a multi..7 degrees. (154) Spar (test2) orthologous hit at 92% f1220/1226 (99.5%) over 1227bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1215/1225 (99.2%) over 1227bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1211/1220 (99.3%) over 1227bp for offset 0 <== THIS IS REAL YLR380W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR380W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2387 (0.3%). Conflicting: 10/2387 (0.4%). NoInfo: 11/2387 (0.5%). Certain keep: 2358/2387 (98.8%) ########################## YLR381W (2202bp = 734AA) has 6 hits (CTF3) kinetochore-related protein Spar (test2) orthologous hit at 87% f2196/2200 (99.8%) over 2201bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2181/2198 (99.2%) over 2202bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1171/1242 (94.3%) over 1250bp for offset 0 <== THIS IS REAL YLR381W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR381W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2388 (0.3%). Conflicting: 10/2388 (0.4%). NoInfo: 11/2388 (0.5%). Certain keep: 2359/2388 (98.8%) ########################## YLR382C (2685bp = 895AA) has 10 hits (NAM2) mitochondrial leucyl tRNA synthetase Spar (test2) orthologous hit at 89% f2685/2685 (100.0%) over 2685bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f955/955 (100.0%) over 955bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2645/2678 (98.8%) over 2685bp for offset 0 <== THIS IS REAL YLR382C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR382C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2389 (0.3%). Conflicting: 10/2389 (0.4%). NoInfo: 11/2389 (0.5%). Certain keep: 2360/2389 (98.8%) ########################## YLR383W (3345bp = 1115AA) has 69 hits (RHC18) involved in recombination repair Spar (test2) orthologous hit at 91% f3345/3345 (100.0%) over 3345bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f2731/2737 (99.8%) over 2738bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3296/3338 (98.7%) over 3345bp for offset 0 <== THIS IS REAL YLR383W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR383W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2390 (0.3%). Conflicting: 10/2390 (0.4%). NoInfo: 11/2390 (0.5%). Certain keep: 2361/2390 (98.8%) ########################## YLR384C (4050bp = 1350AA) has 7 hits (IKI3) required for killer toxin sensitivity Spar (test2) orthologous hit at 91% f4017/4042 (99.4%) over 4048bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3498/4044 (86.5%) over 4049bp for offset 0 Smik (test3) Longest island has f100 at 87% over 3481bp <== THIS IS REAL Sbay (test2) orthologous hit at 83% f3984/4003 (99.5%) over 4007bp for offset 2 <== THIS IS REAL 0 102030400506070800901k1k1k1k 1k1k1k1k 1k1k2k2k2k 2k2k2k2k 2k2k2k3k3k 3k3k3k3k 3k3k3k3k4k4k |_|_|_|_|__|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_|_|__|_|_|_|__|_|_|_|_|_| 100f 87% 530100f 87% 3481bp Sm1175ful |xxxxxxxxxxx|=============================================================================| YLR384C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR384C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2391 (0.3%). Conflicting: 10/2391 (0.4%). NoInfo: 11/2391 (0.5%). Certain keep: 2362/2391 (98.8%) ########################## YLR386W (2643bp = 881AA) has 15 hits (VAC14) Activator of Fab1p Spar (test2) orthologous hit at 90% f2639/2642 (99.9%) over 2643bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1907/1907 (100.0%) over 1907bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2627/2639 (99.5%) over 2643bp for offset 0 <== THIS IS REAL YLR386W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR386W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2392 (0.3%). Conflicting: 10/2392 (0.4%). NoInfo: 11/2392 (0.5%). Certain keep: 2363/2392 (98.8%) ########################## YLR388W (171bp = 57AA) has 21 hits (RPS29A) Ribosomal protein S29A (S36A) (YS29) Spar (test2) orthologous hit at 97% f171/171 (100.0%) over 171bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 100% f28/28 (100.0%) over 28bp for offset 0 Smik (test3) Longest island has f100 at 100% over 28bp Sbay (test2) orthologous hit at 94% f171/171 (100.0%) over 171bp for offset 0 <== THIS IS REAL 0 100 171 |___________________________________________________|_____________________________________| 100f 100% 28bpSm1177brk ||=============| YLR388W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR388W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2393 (0.3%). Conflicting: 10/2393 (0.4%). NoInfo: 11/2393 (0.5%). Certain keep: 2364/2393 (98.8%) ########################## YLR389C (2967bp = 989AA) has 13 hits (STE23) involved in a-factor processing Spar (test2) orthologous hit at 90% f2907/2966 (98.0%) over 2967bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f125/154 (81.2%) over 155bp for offset 0 Smik (test3) Longest island has f100 at 76% over 125bp Sbay (test2) orthologous hit at 80% f2894/2964 (97.6%) over 2967bp for offset 0 <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 2k 2k |__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__|__| 100100f 76% 29bp Sm1178brk |==|> | YLR389C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR389C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2394 (0.3%). Conflicting: 10/2394 (0.4%). NoInfo: 11/2394 (0.5%). Certain keep: 2365/2394 (98.8%) ########################## YLR390W (339bp = 113AA) has 5 hits (ECM19) involved in cell wall biogenesis Spar (test2) orthologous hit at 86% f268/303 (88.4%) over 311bp for offset 0 Spar (test3) Longest island has f100 at 91% over 235bp Spar (test2) orthologous hit at 90% f31/31 (100.0%) over 31bp for offset 0 Spar (test3) Longest island has f100 at 90% over 31bp Smik (test2) orthologous hit at 82% f255/272 (93.8%) over 275bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f221/289 (76.5%) over 298bp for offset 0 Sbay (test3) Longest island has f89 at 75% over 236bp 0 100 200 300 339 |_________________________|__________________________|_________________________|__________| 100f 91% 235bp Sp152full |....................|=============================================================> | 100f 90% 31bpSp152full ||=======> | 100f 689f 75% 236bp Sb241full |............|===>.|ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo> | YLR390W: kill: Spar Spar Sbay - keep: Smik YLR390W - Conflicting. Kill (Spar Sbay) and Keep (Smik) Current total: Certain kills: 8/2395 (0.3%). Conflicting: 11/2395 (0.5%). NoInfo: 11/2395 (0.5%). Certain keep: 2365/2395 (98.7%) ########################## YLR390W-A (717bp = 239AA) has 160 hits (CCW14) Secretory Stress Response protein Spar (test2) orthologous hit at 85% f556/575 (96.7%) over 578bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f686/704 (97.4%) over 717bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f485/513 (94.5%) over 524bp for offset 0 <== THIS IS REAL YLR390W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR390W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2396 (0.3%). Conflicting: 11/2396 (0.5%). NoInfo: 11/2396 (0.5%). Certain keep: 2366/2396 (98.7%) ########################## YLR393W (840bp = 280AA) has 4 hits (ATP10) essential for functional mitochondria..x assembly (105) Spar (test2) orthologous hit at 89% f840/840 (100.0%) over 840bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f527/532 (99.1%) over 533bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f819/829 (98.8%) over 831bp for offset 0 <== THIS IS REAL YLR393W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR393W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2397 (0.3%). Conflicting: 11/2397 (0.5%). NoInfo: 11/2397 (0.5%). Certain keep: 2367/2397 (98.7%) ########################## YLR394W (1449bp = 483AA) has 8 hits (CST9) required for synapsis Spar (test2) orthologous hit at 87% f1372/1448 (94.8%) over 1449bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f994/1041 (95.5%) over 1043bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1354/1398 (96.9%) over 1403bp for offset 0 <== THIS IS REAL YLR394W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR394W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2398 (0.3%). Conflicting: 11/2398 (0.5%). NoInfo: 11/2398 (0.5%). Certain keep: 2368/2398 (98.7%) ########################## YLR395C (237bp = 79AA) has 6 hits (COX8) Cytochrome-c oxidase chain VIII Spar (test2) orthologous hit at 94% f237/237 (100.0%) over 237bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f232/236 (98.3%) over 237bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f233/236 (98.7%) over 237bp for offset 0 <== THIS IS REAL YLR395C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR395C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2399 (0.3%). Conflicting: 11/2399 (0.5%). NoInfo: 11/2399 (0.5%). Certain keep: 2369/2399 (98.7%) ########################## YLR396C (2076bp = 692AA) has 13 hits (VPS33) involved in vacuolar protein targeting Spar (test2) orthologous hit at 89% f2076/2076 (100.0%) over 2076bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f981/981 (100.0%) over 981bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f2039/2072 (98.4%) over 2076bp for offset 0 <== THIS IS REAL YLR396C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR396C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2400 (0.3%). Conflicting: 11/2400 (0.5%). NoInfo: 11/2400 (0.5%). Certain keep: 2370/2400 (98.8%) ########################## YLR397C (2343bp = 781AA) has 89 hits (AFG2) homology to the CDC48 gene product Spar (test2) orthologous hit at 90% f1224/1224 (100.0%) over 1224bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f957/1082 (88.4%) over 1083bp for offset 2 Smik (test3) Longest island has f100 at 88% over 957bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2338/2342 (99.8%) over 2343bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k2k |__|___|___|___|___|___|__|___|___|___|___|___|__|___|___|___|___|___|__|___|___|___|___|_| 100f 88% 957bp Sm1180brk |....|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YLR397C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR397C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2401 (0.3%). Conflicting: 11/2401 (0.5%). NoInfo: 11/2401 (0.5%). Certain keep: 2371/2401 (98.8%) ########################## YLR398C (3864bp = 1288AA) has 38 hits (SKI2) antiviral protein, putative helicase Spar (test2) orthologous hit at 90% f3842/3861 (99.5%) over 3864bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f3413/3857 (88.5%) over 3864bp for offset 0 Smik (test3) Longest island has f99 at 85% over 3437bp <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2097/2117 (99.1%) over 2120bp for offset 0 <== THIS IS REAL 0 1020300405060070809001k1k1k 1k1k1k 1k1k1k 1k2k2k 2k2k2k 2k2k2k 2k2k3k 3k3k3k 3k3k3k 3k3k3k |_|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_| 99f 85% 3437bp 100f 90% 4Sm1181ful |===============================================================================|xxxxxxxxx| YLR398C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR398C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2402 (0.3%). Conflicting: 11/2402 (0.5%). NoInfo: 11/2402 (0.5%). Certain keep: 2372/2402 (98.8%) ########################## YLR399C (2061bp = 687AA) has 32 hits (BDF1) Bdf1p contains two bromodomains, loc.. nucleolus (179) Spar (test2) orthologous hit at 89% f1961/1979 (99.1%) over 1980bp for offset 2 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f1502/1512 (99.3%) over 1512bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1746/1787 (97.7%) over 1792bp for offset 1 <== THIS IS REAL YLR399C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR399C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2403 (0.3%). Conflicting: 11/2403 (0.5%). NoInfo: 11/2403 (0.5%). Certain keep: 2373/2403 (98.8%) ########################## YLR403W (2052bp = 684AA) has 260 hits (SFP1) split zinc finger protein Spar (test2) orthologous hit at 82% f1834/2012 (91.2%) over 2039bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2018/2041 (98.9%) over 2052bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 70% f1432/1735 (82.5%) over 1777bp for offset 0 Sbay (test3) Longest island has f98 at 81% over 797bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k |___|___|____|___|___|____|___|____|___|___|____|___|____|___|___|____|___|___|____|___|__| 98f 81% 797bp 91f 75% 472bp Sb241full |==================================>..|===================>..................> | YLR403W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR403W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2404 (0.3%). Conflicting: 11/2404 (0.5%). NoInfo: 11/2404 (0.5%). Certain keep: 2374/2404 (98.8%) ########################## YLR410W (3441bp = 1147AA) has 15 hits (VIP1) Homologous to S. pombe asp1+ Spar (test2) orthologous hit at 90% f3441/3441 (100.0%) over 3441bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 87% f2535/2543 (99.7%) over 2544bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f2677/2701 (99.1%) over 2704bp for offset 0 <== THIS IS REAL YLR410W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR410W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2405 (0.3%). Conflicting: 11/2405 (0.5%). NoInfo: 11/2405 (0.5%). Certain keep: 2375/2405 (98.8%) ########################## YLR411W (726bp = 242AA) has 7 hits (CTR3) Copper Transporter Spar (test2) orthologous hit at 91% f726/726 (100.0%) over 726bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f724/724 (100.0%) over 724bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f718/724 (99.2%) over 725bp for offset 0 <== THIS IS REAL YLR411W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR411W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2406 (0.3%). Conflicting: 11/2406 (0.5%). NoInfo: 11/2406 (0.5%). Certain keep: 2376/2406 (98.8%) ########################## YLR417W (1701bp = 567AA) has 16 hits (VPS36) involved in vacuolar protein targeting Spar (test2) orthologous hit at 83% f1344/1431 (93.9%) over 1442bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f220/220 (100.0%) over 220bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f1130/1340 (84.3%) over 1365bp for offset 0 Sbay (test3) Longest island has f93 at 77% over 626bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 11k |____|____|____|_____|____|____|_____|____|____|____|_____|____|____|_____|____|____|____|| 100f 80% 493bp 93f 77% 626bp Sb241full |=========================>...........|================================>> | YLR417W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR417W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2407 (0.3%). Conflicting: 11/2407 (0.5%). NoInfo: 11/2407 (0.5%). Certain keep: 2377/2407 (98.8%) ########################## YLR418C (1182bp = 394AA) has 10 hits (CDC73) RNA polymerase II accessory protein Spar (test2) orthologous hit at 81% f863/1009 (85.5%) over 1021bp for offset 0 Spar (test3) Longest island has f100 at 90% over 819bp <== THIS IS REAL Smik (test2) non-orthologous hit at 73% f938/1149 (81.6%) over 1171bp for offset 0 Smik (test3) Longest island has f100 at 83% over 819bp <== THIS IS REAL Sbay (test2) orthologous hit at 79% f806/816 (98.8%) over 819bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|______|_______|_______|______|_______|______|_______|_______|______|______| 100f 90% 819bp Sp153full |...............|=============================================================|> 100f 83% 819bp Sm1187ful |............................|============================================================|> YLR418C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR418C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2408 (0.3%). Conflicting: 11/2408 (0.5%). NoInfo: 11/2408 (0.5%). Certain keep: 2378/2408 (98.8%) ########################## YLR420W (1095bp = 365AA) has 6 hits (URA4) dihydrooratase Spar (test2) orthologous hit at 90% f1095/1095 (100.0%) over 1095bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f399/440 (90.7%) over 443bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1095/1095 (100.0%) over 1095bp for offset 0 <== THIS IS REAL YLR420W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR420W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2409 (0.3%). Conflicting: 11/2409 (0.5%). NoInfo: 11/2409 (0.5%). Certain keep: 2379/2409 (98.8%) ########################## YLR421C (471bp = 157AA) has 10 hits (RPN13) New 26S proteasome subunit Spar (test2) orthologous hit at 89% f468/468 (100.0%) over 468bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f470/470 (100.0%) over 470bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f468/469 (99.8%) over 469bp for offset 0 <== THIS IS REAL YLR421C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR421C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2410 (0.3%). Conflicting: 11/2410 (0.5%). NoInfo: 11/2410 (0.5%). Certain keep: 2380/2410 (98.8%) ########################## YLR423C (1254bp = 418AA) has 47 hits (APG17) involved in autophagy Spar (test2) orthologous hit at 89% f1254/1254 (100.0%) over 1254bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 82% f1227/1247 (98.4%) over 1252bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1241/1252 (99.1%) over 1254bp for offset 0 <== THIS IS REAL YLR423C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR423C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2411 (0.3%). Conflicting: 11/2411 (0.5%). NoInfo: 11/2411 (0.5%). Certain keep: 2381/2411 (98.8%) ########################## YLR425W (3924bp = 1308AA) has 24 hits (TUS1) 1307 AA, hydrophilic protein. Spar (test2) orthologous hit at 90% f3924/3924 (100.0%) over 3924bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2021/2034 (99.4%) over 2037bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f3587/3600 (99.6%) over 3606bp for offset 0 <== THIS IS REAL YLR425W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR425W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2412 (0.3%). Conflicting: 11/2412 (0.5%). NoInfo: 11/2412 (0.5%). Certain keep: 2382/2412 (98.8%) ########################## YLR429W (1956bp = 652AA) has 14 hits (CRN1) has homology to the Dictyostelium an..in coronin (117) Flanking ORFs are: YLR424W and YLR426W. YLR429W skipped ########################## YLR430W (6696bp = 2232AA) has 195 hits (SEN1) component of a nuclear-localized t..ng complex (100) Spar (test2) orthologous hit at 90% f5829/5835 (99.9%) over 5842bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1262/1316 (95.9%) over 1326bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f6569/6661 (98.6%) over 6680bp for offset 0 <== THIS IS REAL YLR430W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR430W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2413 (0.3%). Conflicting: 11/2413 (0.5%). NoInfo: 11/2413 (0.5%). Certain keep: 2383/2413 (98.8%) ########################## YLR432W (1572bp = 524AA) has 28 hits (IMD3) IMP dehydrogenase homolog Spar (test2) orthologous hit at 92% f1572/1572 (100.0%) over 1572bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1507/1511 (99.7%) over 1512bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1572/1572 (100.0%) over 1572bp for offset 0 <== THIS IS REAL YLR432W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR432W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2414 (0.3%). Conflicting: 11/2414 (0.5%). NoInfo: 11/2414 (0.5%). Certain keep: 2384/2414 (98.8%) ########################## YLR433C (1662bp = 554AA) has 39 hits (CNA1) Calcineurin subunit A; type 2B prote..ytoplasmic (145) Spar (test2) orthologous hit at 91% f1657/1661 (99.8%) over 1662bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1662/1662 (100.0%) over 1662bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1635/1647 (99.3%) over 1649bp for offset 0 <== THIS IS REAL YLR433C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR433C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2415 (0.3%). Conflicting: 11/2415 (0.5%). NoInfo: 11/2415 (0.5%). Certain keep: 2385/2415 (98.8%) ########################## YLR436C (3825bp = 1275AA) has 35 hits (ECM30) involved in cell wall biogenesis Spar (test2) orthologous hit at 89% f3825/3825 (100.0%) over 3825bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2301/2459 (93.6%) over 2475bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 65% f1005/1433 (70.1%) over 1478bp for offset 0 Sbay (test3) Longest island has f98 at 80% over 736bp <== THIS IS REAL 0 1020030405006070800901k1k 1k1k1k 1k1k 1k1k1k 2k2k2k 2k2k2k 2k2k2k 2k3k3k 3k3k 3k3k3k 3k33k |_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|__|_|_|__|_|| 98f 80% 736bp Sb240brk |.................|================|> YLR436C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR436C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2416 (0.3%). Conflicting: 11/2416 (0.5%). NoInfo: 11/2416 (0.5%). Certain keep: 2386/2416 (98.8%) ########################## YLR438W (1275bp = 425AA) has 5 hits (CAR2) ornithine aminotransferase Spar (test2) orthologous hit at 92% f1275/1275 (100.0%) over 1275bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1275/1275 (100.0%) over 1275bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1275/1275 (100.0%) over 1275bp for offset 0 <== THIS IS REAL YLR438W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR438W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2417 (0.3%). Conflicting: 11/2417 (0.5%). NoInfo: 11/2417 (0.5%). Certain keep: 2387/2417 (98.8%) ########################## YLR438C-A (270bp = 90AA) has 5 hits (LSM3) Putative snRNP protein containing Sm-.. U6 snRNAs (133) Spar (test2) orthologous hit at 90% f270/270 (100.0%) over 270bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f270/270 (100.0%) over 270bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f270/270 (100.0%) over 270bp for offset 0 <== THIS IS REAL YLR438C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR438C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2418 (0.3%). Conflicting: 11/2418 (0.5%). NoInfo: 11/2418 (0.5%). Certain keep: 2388/2418 (98.8%) ########################## YLR439W (960bp = 320AA) has 5 hits (MRPL4) Mitochondrial 60S ribosomal protein L4 Spar (test2) orthologous hit at 89% f960/960 (100.0%) over 960bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f533/959 (55.6%) over 960bp for offset 2 Smik (test3) Longest island has f100 at 86% over 533bp <== THIS IS REAL Sbay (test2) orthologous hit at 81% f960/960 (100.0%) over 960bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 960 |________|________|_________|________|________|_________|________|_________|________|_____| 100f 86% 533bp 100f 84% 426bp Sm911full |=================================================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YLR439W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR439W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2419 (0.3%). Conflicting: 11/2419 (0.5%). NoInfo: 11/2419 (0.5%). Certain keep: 2389/2419 (98.8%) ########################## YLR441C (768bp = 256AA) has 10 hits (RPS1A) Ribosomal protein S1A (rp10A) Spar (test2) orthologous hit at 97% f768/768 (100.0%) over 768bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 94% f768/768 (100.0%) over 768bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 95% f768/768 (100.0%) over 768bp for offset 0 <== THIS IS REAL YLR441C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR441C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2420 (0.3%). Conflicting: 11/2420 (0.5%). NoInfo: 11/2420 (0.5%). Certain keep: 2390/2420 (98.8%) ########################## YLR442C (2937bp = 979AA) has 40 hits (SIR3) regulator of silencing at HML, HMR, .. telomeres (93) Spar (test2) orthologous hit at 84% f1919/1963 (97.8%) over 1969bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f1782/1832 (97.3%) over 1847bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f1652/1810 (91.3%) over 1839bp for offset 2 <== THIS IS REAL YLR442C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR442C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2421 (0.3%). Conflicting: 11/2421 (0.5%). NoInfo: 11/2421 (0.5%). Certain keep: 2391/2421 (98.8%) ########################## YLR443W (1347bp = 449AA) has 4 hits (ECM7) involved in cell wall biogenesis Flanking ORFs are: YLR441C and YLR443W. YLR443W skipped ########################## YLR447C (1038bp = 346AA) has 6 hits (VMA6) vacuolar ATPase V0 domain subunit d (36 kDa) Spar (test2) orthologous hit at 95% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1038/1038 (100.0%) over 1038bp for offset 0 <== THIS IS REAL YLR447C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR447C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2422 (0.3%). Conflicting: 11/2422 (0.5%). NoInfo: 11/2422 (0.5%). Certain keep: 2392/2422 (98.8%) ########################## YLR449W (1179bp = 393AA) (tdist=46.1k) has 566 hits (FPR4) 60 kDa nuclear FK506 ..ng protein (95) Spar (test2) orthologous hit at 84% f680/717 (94.8%) over 720bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1137/1166 (97.5%) over 1178bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1148/1166 (98.5%) over 1179bp for offset 0 <== THIS IS REAL YLR449W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR449W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2423 (0.3%). Conflicting: 11/2423 (0.5%). NoInfo: 11/2423 (0.5%). Certain keep: 2393/2423 (98.8%) ########################## YLR450W (3138bp = 1046AA) (tdist=42.4k) has 21 hits (HMG2) 3-hydroxy-3-methylglu..se isozyme (124) Spar (test2) orthologous hit at 90% f3115/3138 (99.3%) over 3138bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3104/3135 (99.0%) over 3138bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f3074/3130 (98.2%) over 3138bp for offset 1 <== THIS IS REAL YLR450W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR450W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2424 (0.3%). Conflicting: 11/2424 (0.5%). NoInfo: 11/2424 (0.5%). Certain keep: 2394/2424 (98.8%) ########################## YLR451W (2661bp = 887AA) (tdist=39.4k) has 367 hits (LEU3) zinc-finger transcrip..omain type (141) Spar (test2) orthologous hit at 90% f2648/2657 (99.7%) over 2661bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2349/2350 (100.0%) over 2350bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f2076/2086 (99.5%) over 2090bp for offset 0 <== THIS IS REAL YLR451W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR451W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2425 (0.3%). Conflicting: 11/2425 (0.5%). NoInfo: 11/2425 (0.5%). Certain keep: 2395/2425 (98.8%) ########################## YLR452C (2097bp = 699AA) (tdist=36.8k) has 8 hits (SST2) member of the RGS (regu..ng protein (144) Spar (test2) orthologous hit at 89% f2097/2097 (100.0%) over 2097bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1968/2046 (96.2%) over 2050bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2071/2092 (99.0%) over 2097bp for offset 0 <== THIS IS REAL YLR452C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR452C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2426 (0.3%). Conflicting: 11/2426 (0.5%). NoInfo: 11/2426 (0.5%). Certain keep: 2396/2426 (98.8%) ########################## YLR453C (1188bp = 396AA) (tdist=35.1k) has 19 hits (RIF2) Nuclear protein Spar (test2) orthologous hit at 82% f1188/1188 (100.0%) over 1188bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 74% f1141/1181 (96.6%) over 1188bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1090/1174 (92.8%) over 1188bp for offset 0 <== THIS IS REAL YLR453C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR453C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2427 (0.3%). Conflicting: 11/2427 (0.5%). NoInfo: 11/2427 (0.5%). Certain keep: 2397/2427 (98.8%) ########################## YLR457C (960bp = 320AA) (tdist=21.4k) has 11 hits (NBP1) Nap1p binding protein Flanking ORFs are: YLR452C and YLR454W. YLR457C skipped ########################## YLR459W (1185bp = 395AA) (tdist=19.6k) has 18 hits (CDC91) member of major facil..uperfamily (98) Spar (test2) orthologous hit at 92% f1185/1185 (100.0%) over 1185bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1180/1184 (99.7%) over 1185bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 82% f1158/1182 (98.0%) over 1185bp for offset 0 <== THIS IS REAL YLR459W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YLR459W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2428 (0.3%). Conflicting: 11/2428 (0.5%). NoInfo: 11/2428 (0.5%). Certain keep: 2398/2428 (98.8%) ########################## YLR461W (363bp = 121AA) (tdist=14.8k) has 127 hits (PAU4) member of the seripaup..ein family (99) Spar (test2) non-orthologous hit at 95% f319/360 (88.6%) over 363bp for offset 0 Spar (test3) Longest island has f100 at 98% over 268bp Spar (test2) non-orthologous hit at 95% f363/363 (100.0%) over 363bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f192/198 (97.0%) over 199bp for offset 0 Smik (test3) Longest island has f100 at 86% over 192bp Sbay (test2) non-orthologous hit at 88% f244/363 (67.2%) over 363bp for offset 1 Sbay (test3) Longest island has f100 at 91% over 243bp Sbay (test2) non-orthologous hit at 88% f363/363 (100.0%) over 363bp for offset 0 <== THIS IS REAL 0 100 200 300 363 |_______________________|________________________|________________________|_______________| 100f 98% 268bp Sp457full |.......................|=================================================================| 100f 86% 192bp Sm909full |.|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| 100f 91% 243bp Sb426full |..............................|oooooooooooooooooooooooooooooooooooooooooooooooooooooooooo|> YLR461W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YLR461W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2429 (0.3%). Conflicting: 11/2429 (0.5%). NoInfo: 11/2429 (0.5%). Certain keep: 2399/2429 (98.8%) ########################## YLR466W (4149bp = 1383AA) (tdist=6.9k) has 63 hits (YRF1-4) Y'-helicase protein 1 Flanking ORFs are: YLR460C and YLR462W. YLR466W skipped ########################## YLR467W (5391bp = 1797AA) (tdist=278) has 67 hits (YRF1-5) Y'-helicase protein 1 Spar (test2) non-orthologous hit at 94% f1591/2234 (71.2%) over 2234bp for offset 1 Spar (test3) Longest island has f100 at 95% over 1591bp <== THIS IS REAL Smik (test2) non-orthologous hit at 93% f2287/2294 (99.7%) over 2294bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 55% f272/543 (50.1%) over 571bp for offset 1 Sbay (test3) Longest island has f74 at 57% over 117bp Sbay (test2) non-orthologous hit at 56% f253/409 (61.9%) over 431bp for offset 2 Sbay (test3) Longest island has f81 at 49% over 150bp Sbay (test2) non-orthologous hit at 55% f266/416 (63.9%) over 439bp for offset 0 Sbay (test3) Longest island has f94 at 54% over 78bp Sbay (test2) non-orthologous hit at 55% f229/393 (58.3%) over 414bp for offset 2 Sbay (test3) Longest island has f80 at 50% over 138bp 01020340506708091k1k11k1k11k1k11k2k22k2k22k2k22k2k33k3k33k3k33k3k34k4k44k4k44k4k44k5k55k5k5k ||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_||_|_| 100f 94% 6100f 95% 1591bp Sp284brk |=========|oooooooooooooooooooooooooo> | 74f71766f81f 56% 54bp Sb781brk |=>|x||=>|> | 100781100f 72% 25bp Sb272brk ||>.||o|> | 808876f94f 54% 78bp Sb294brk |>|||>.|> | 74f18082f 55% 22bp Sb91full |x>||=|> | YLR467W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YLR467W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2430 (0.3%). Conflicting: 11/2430 (0.5%). NoInfo: 11/2430 (0.5%). Certain keep: 2400/2430 (98.8%) ########################## YML132W (1140bp = 380AA) (tdist=7.2k) has 77 hits (COS3) similar to subtelomeric..d proteins (101) Spar (test2) non-orthologous hit at 80% f1117/1135 (98.4%) over 1140bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 78% f1098/1131 (97.1%) over 1140bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 66% f655/1123 (58.3%) over 1139bp for offset 0 Sbay (test3) Longest island has f89 at 65% over 441bp Sbay (test2) non-orthologous hit at 65% f573/1126 (50.9%) over 1140bp for offset 2 Sbay (test3) Longest island has f96 at 66% over 445bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k |______|_______|_______|_______|_______|_______|_______|_______|_______|______|_______|___| 98f 64% 255bp 89f 67% 227bp 89f 65% 441bp 97f 74% 203bp Sb606full |===================>.|=================|ooooooooooooooooooooooooooooooooo>|==============|> 96f 66% 445bp 97f 70% 371bp Sb206full |.......................|==================================>.|xxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YML132W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML132W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2431 (0.3%). Conflicting: 11/2431 (0.5%). NoInfo: 11/2431 (0.5%). Certain keep: 2401/2431 (98.8%) ########################## YML130C (1692bp = 564AA) (tdist=11.4k) has 8 hits (ERO1) involved in protein dis.. in the ER (111) Spar (test2) orthologous hit at 91% f1688/1691 (99.8%) over 1692bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1655/1677 (98.7%) over 1681bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1665/1687 (98.7%) over 1692bp for offset 0 <== THIS IS REAL YML130C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML130C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2432 (0.3%). Conflicting: 11/2432 (0.5%). NoInfo: 11/2432 (0.5%). Certain keep: 2402/2432 (98.8%) ########################## YML129C (213bp = 71AA) (tdist=14.5k) has 15 hits (COX14) mitochondrial membrane protein Spar (test2) orthologous hit at 91% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL YML129C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML129C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2433 (0.3%). Conflicting: 11/2433 (0.5%). NoInfo: 11/2433 (0.5%). Certain keep: 2403/2433 (98.8%) ########################## YML128C (1542bp = 514AA) (tdist=15.1k) has 7 hits (MSC1) Spar (test2) orthologous hit at 90% f1542/1542 (100.0%) over 1542bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f155/218 (71.1%) over 219bp for offset 0 Smik (test3) Longest island has f100 at 84% over 130bp Sbay (test2) orthologous hit at 80% f1262/1289 (97.9%) over 1291bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k |____|_____|_____|_____|_____|_____|____|_____|_____|_____|_____|_____|____|_____|_____|__| 1100f100f 84%Sm550brk ||xxx|=======| YML128C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YML128C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2434 (0.3%). Conflicting: 11/2434 (0.5%). NoInfo: 11/2434 (0.5%). Certain keep: 2404/2434 (98.8%) ########################## YML127W (1746bp = 582AA) (tdist=17.0k) has 5 hits (RSC9) Hypothetical ORF Spar (test2) orthologous hit at 91% f1746/1746 (100.0%) over 1746bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1746/1746 (100.0%) over 1746bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1738/1744 (99.7%) over 1746bp for offset 0 <== THIS IS REAL YML127W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML127W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2435 (0.3%). Conflicting: 11/2435 (0.5%). NoInfo: 11/2435 (0.5%). Certain keep: 2405/2435 (98.8%) ########################## YML126C (1476bp = 492AA) (tdist=19.0k) has 6 hits (ERG13) 3-hydroxy-3-methylglut..A synthase (104) Spar (test2) orthologous hit at 94% f1456/1474 (98.8%) over 1476bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 91% f1395/1475 (94.6%) over 1476bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f1388/1470 (94.4%) over 1476bp for offset 1 <== THIS IS REAL YML126C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML126C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2436 (0.3%). Conflicting: 11/2436 (0.5%). NoInfo: 11/2436 (0.5%). Certain keep: 2406/2436 (98.8%) ########################## YML123C (1764bp = 588AA) (tdist=24.0k) has 14 hits (PHO84) inorganic phosphate t..ne protein (113) Spar (test2) non-orthologous hit at 95% f1761/1761 (100.0%) over 1764bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f1754/1760 (99.7%) over 1764bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1754/1759 (99.7%) over 1763bp for offset 0 <== THIS IS REAL YML123C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML123C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2437 (0.3%). Conflicting: 11/2437 (0.5%). NoInfo: 11/2437 (0.5%). Certain keep: 2407/2437 (98.8%) ########################## YML121W (933bp = 311AA) (tdist=26.9k) has 19 hits (GTR1) Putative small GTPase Spar (test2) orthologous hit at 92% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f933/933 (100.0%) over 933bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f926/929 (99.7%) over 933bp for offset 0 <== THIS IS REAL YML121W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML121W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2438 (0.3%). Conflicting: 11/2438 (0.5%). NoInfo: 11/2438 (0.5%). Certain keep: 2408/2438 (98.8%) ########################## YML120C (1542bp = 514AA) (tdist=28.2k) has 16 hits (NDI1) NADH dehydrogenase (ubiquinone) Spar (test2) orthologous hit at 91% f1542/1542 (100.0%) over 1542bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1536/1541 (99.7%) over 1542bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1530/1540 (99.4%) over 1542bp for offset 0 <== THIS IS REAL YML120C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML120C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2439 (0.3%). Conflicting: 11/2439 (0.5%). NoInfo: 11/2439 (0.5%). Certain keep: 2409/2439 (98.8%) ########################## YML118W (1518bp = 506AA) (tdist=32.3k) has 13 hits (NGL3) DNase/RNase (putative)..1 and ngl2 (175) Spar (test2) orthologous hit at 86% f1478/1512 (97.8%) over 1518bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 79% f1441/1507 (95.6%) over 1518bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1158/1223 (94.7%) over 1235bp for offset 0 <== THIS IS REAL YML118W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML118W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2440 (0.3%). Conflicting: 11/2440 (0.5%). NoInfo: 11/2440 (0.5%). Certain keep: 2410/2440 (98.8%) ########################## YML116W (1629bp = 543AA) (tdist=38.1k) has 21 hits (ATR1) predicted protein is v..nding site (198) Spar (test2) orthologous hit at 90% f1581/1581 (100.0%) over 1581bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1581/1585 (99.7%) over 1586bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1578/1586 (99.5%) over 1587bp for offset 1 <== THIS IS REAL YML116W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML116W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2441 (0.3%). Conflicting: 11/2441 (0.5%). NoInfo: 11/2441 (0.5%). Certain keep: 2411/2441 (98.8%) ########################## YML115C (1608bp = 536AA) (tdist=40.1k) has 18 hits (VAN1) mannosyltransferase Spar (test2) orthologous hit at 92% f1608/1608 (100.0%) over 1608bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1608/1608 (100.0%) over 1608bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1286/1292 (99.5%) over 1293bp for offset 0 <== THIS IS REAL YML115C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML115C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2442 (0.3%). Conflicting: 11/2442 (0.5%). NoInfo: 11/2442 (0.5%). Certain keep: 2412/2442 (98.8%) ########################## YML114C (1533bp = 511AA) (tdist=42.0k) has 12 hits (TAF8) TAF65, subunit of tran..ctor TFIID (102) Spar (test2) orthologous hit at 88% f1530/1532 (99.9%) over 1533bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1526/1531 (99.7%) over 1533bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1494/1524 (98.0%) over 1533bp for offset 0 <== THIS IS REAL YML114C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML114C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2443 (0.3%). Conflicting: 11/2443 (0.5%). NoInfo: 11/2443 (0.5%). Certain keep: 2413/2443 (98.8%) ########################## YML113W (747bp = 249AA) (tdist=44.0k) has 361 hits (DAT1) datin, an oligo(dA).ol..ng protein (103) Spar (test2) orthologous hit at 72% f492/728 (67.6%) over 746bp for offset 0 Spar (test3) Longest island has f98 at 88% over 421bp <== THIS IS REAL Smik (test2) orthologous hit at 71% f532/692 (76.9%) over 708bp for offset 0 Smik (test3) Longest island has f99 at 82% over 479bp <== THIS IS REAL Sbay (test2) orthologous hit at 66% f532/724 (73.5%) over 742bp for offset 0 Sbay (test3) Longest island has f94 at 75% over 449bp <== THIS IS REAL 0 100 200 300 400 500 600 700 747 |___________|___________|___________|___________|___________|___________|___________|_____| 98f 88% 421bp Sp443full |........................................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|x> 99f 82% 479bp Sm551full |.............................|=======================================================|> 94f 75% 449bp Sb553full |.....................................|ooooooooooooooooooooooooooooooooooooooooooooooooooo|o> YML113W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML113W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2444 (0.3%). Conflicting: 11/2444 (0.5%). NoInfo: 11/2444 (0.5%). Certain keep: 2414/2444 (98.8%) ########################## YML112W (891bp = 297AA) (tdist=45.0k) has 7 hits (CTK3) CTD kinase-I gamma subunit Spar (test2) orthologous hit at 70% f599/819 (73.1%) over 842bp for offset 0 Spar (test3) Longest island has f99 at 88% over 434bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f878/889 (98.8%) over 890bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f872/884 (98.6%) over 890bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 891 |_________|_________|_________|_________|_________|_________|_________|_________|_________| 99f 88% 434bp Sp443full |..........................................|=========================================|=> YML112W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML112W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2445 (0.3%). Conflicting: 11/2445 (0.4%). NoInfo: 11/2445 (0.4%). Certain keep: 2415/2445 (98.8%) ########################## YML111W (2763bp = 921AA) (tdist=46.9k) has 38 hits (BUL2) (putative) ubiquitin-m..egradation (107) Spar (test2) orthologous hit at 92% f2763/2763 (100.0%) over 2763bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2417/2447 (98.8%) over 2449bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2195/2218 (99.0%) over 2228bp for offset 0 <== THIS IS REAL YML111W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML111W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2446 (0.3%). Conflicting: 11/2446 (0.4%). NoInfo: 11/2446 (0.4%). Certain keep: 2416/2446 (98.8%) ########################## YML110C (924bp = 308AA) has 4 hits (COQ5) Putative mitochondrial C-methyltransferase Spar (test2) orthologous hit at 91% f924/924 (100.0%) over 924bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f924/924 (100.0%) over 924bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f924/924 (100.0%) over 924bp for offset 0 <== THIS IS REAL YML110C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML110C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2447 (0.3%). Conflicting: 11/2447 (0.4%). NoInfo: 11/2447 (0.4%). Certain keep: 2417/2447 (98.8%) ########################## YML109W (2829bp = 943AA) has 24 hits (ZDS2) Zds1 homolog Spar (test2) orthologous hit at 86% f2818/2828 (99.6%) over 2829bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1462/1668 (87.6%) over 1694bp for offset 0 Smik (test3) Longest island has f99 at 82% over 1417bp <== THIS IS REAL Sbay (test2) orthologous hit at 75% f2449/2542 (96.3%) over 2568bp for offset 0 <== THIS IS REAL 0 100200300400500 6007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 22k |__|__|__|__|__|___|__|__|__|__|__|___|__|__|__|__|___|__|__|__|__|__|___|__|__|__|__|___|| 99f 82% 1417bp Sm552full |============================================>.......> | YML109W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML109W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2448 (0.3%). Conflicting: 11/2448 (0.4%). NoInfo: 11/2448 (0.4%). Certain keep: 2418/2448 (98.8%) ########################## YML106W (681bp = 227AA) has 7 hits (URA5) Orotate phosphoribosyltransferase 1 Spar (test2) orthologous hit at 93% f681/681 (100.0%) over 681bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f680/680 (100.0%) over 680bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f677/680 (99.6%) over 681bp for offset 0 <== THIS IS REAL YML106W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML106W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2449 (0.3%). Conflicting: 11/2449 (0.4%). NoInfo: 11/2449 (0.4%). Certain keep: 2419/2449 (98.8%) ########################## YML105C (822bp = 274AA) has 9 hits (SEC65) signal recognition particle subunit, ..lian SRP19 (108) Spar (test2) orthologous hit at 91% f822/822 (100.0%) over 822bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f819/822 (99.6%) over 822bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f808/815 (99.1%) over 822bp for offset 0 <== THIS IS REAL YML105C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML105C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2450 (0.3%). Conflicting: 11/2450 (0.4%). NoInfo: 11/2450 (0.4%). Certain keep: 2420/2450 (98.8%) ########################## YML104C (3384bp = 1128AA) has 31 hits (MDM1) intermediate filament protein Spar (test2) orthologous hit at 87% f3379/3384 (99.9%) over 3384bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f2943/3377 (87.1%) over 3384bp for offset 0 Smik (test3) Longest island has f99 at 81% over 2984bp <== THIS IS REAL Sbay (test2) orthologous hit at 77% f3293/3361 (98.0%) over 3375bp for offset 0 <== THIS IS REAL 0 1002030040050600700809001k 1k1k 1k 1k1k 1k 1k1k 1k 2k2k 2k 2k2k 2k 2k2k 2k 2k3k 3k 3k3k 3k |_|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__|__|_|__| 99f 81% 2984bp 100f 83% 40Sm552full |==============================================================================|oooooooooo| YML104C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML104C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2451 (0.3%). Conflicting: 11/2451 (0.4%). NoInfo: 11/2451 (0.4%). Certain keep: 2421/2451 (98.8%) ########################## YML103C (4968bp = 1656AA) has 131 hits (NUP188) Nucleoporin Spar (test2) orthologous hit at 88% f3363/3397 (99.0%) over 3404bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 82% f3340/3355 (99.6%) over 3359bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f4292/4404 (97.5%) over 4424bp for offset 0 <== THIS IS REAL YML103C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML103C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2452 (0.3%). Conflicting: 11/2452 (0.4%). NoInfo: 11/2452 (0.4%). Certain keep: 2422/2452 (98.8%) ########################## YML102W (1407bp = 469AA) has 5 hits (CAC2) p60 subunit of the yeast Chromatin As..-I (CAF-I) (103) Flanking ORFs are: YML104C and YML102W. YML102W skipped ########################## YML100W (3297bp = 1099AA) has 22 hits (TSL1) 123 kD regulatory subunit of trehal..ne product (157) Spar (test2) orthologous hit at 91% f3293/3296 (99.9%) over 3297bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f3267/3290 (99.3%) over 3297bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 65% f405/787 (51.5%) over 821bp for offset 1 Sbay (test3) Longest island has f94 at 76% over 214bp 0 10020030400500600708009001k 1k1k 1k 1k1k 1k 1k 1k1k 2k 2k 2k2k 2k 2k2k 2k 2k 2k3k 3k 3k 3k |_|__|__|_|__|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|__|_|__|__|_|__|__|__|_|__|__|__| 94f 76% 214bp Sb552brk |...........|=====>...> | YML100W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YML100W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2453 (0.3%). Conflicting: 11/2453 (0.4%). NoInfo: 11/2453 (0.4%). Certain keep: 2423/2453 (98.8%) ########################## YML099C (2643bp = 881AA) has 16 hits (ARG81) zinc-finger transcription factor of..omain type (127) Flanking ORFs are: YML101C and YML100W-A. YML099C skipped ########################## YML098W (504bp = 168AA) has 137 hits (TAF13) TFIID subunit Spar (test2) orthologous hit at 91% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f504/504 (100.0%) over 504bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f486/498 (97.6%) over 504bp for offset 0 <== THIS IS REAL YML098W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML098W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2454 (0.3%). Conflicting: 11/2454 (0.4%). NoInfo: 11/2454 (0.4%). Certain keep: 2424/2454 (98.8%) ########################## YML097C (1356bp = 452AA) has 28 hits (VPS9) similar to mammalian ras inhibitors Spar (test2) orthologous hit at 87% f1352/1355 (99.8%) over 1356bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1356/1356 (100.0%) over 1356bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 75% f1196/1244 (96.1%) over 1256bp for offset 0 <== THIS IS REAL YML097C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML097C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2455 (0.3%). Conflicting: 11/2455 (0.4%). NoInfo: 11/2455 (0.4%). Certain keep: 2425/2455 (98.8%) ########################## YML095C (633bp = 211AA) has 13 hits (RAD10) ssDNA endonuclease Flanking ORFs are: YML098W and YML096W. YML095C skipped ########################## YML093W (2700bp = 900AA) has 157 hits (UTP14) Protein required for cell viability Spar (test2) orthologous hit at 88% f2684/2695 (99.6%) over 2700bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2674/2692 (99.3%) over 2700bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f2575/2673 (96.3%) over 2700bp for offset 0 <== THIS IS REAL YML093W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML093W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2456 (0.3%). Conflicting: 11/2456 (0.4%). NoInfo: 11/2456 (0.4%). Certain keep: 2426/2456 (98.8%) ########################## YML092C (753bp = 251AA) has 11 hits (PRE8) proteasome component Y7 Spar (test2) orthologous hit at 93% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f753/753 (100.0%) over 753bp for offset 0 <== THIS IS REAL YML092C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML092C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2457 (0.3%). Conflicting: 11/2457 (0.4%). NoInfo: 11/2457 (0.4%). Certain keep: 2427/2457 (98.8%) ########################## YML091C (3609bp = 1203AA) has 58 hits (RPM2) subunit of mitochondrial RNase P Spar (test2) orthologous hit at 89% f3156/3208 (98.4%) over 3215bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 84% f3589/3601 (99.7%) over 3609bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f3542/3592 (98.6%) over 3605bp for offset 0 <== THIS IS REAL YML091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2458 (0.3%). Conflicting: 11/2458 (0.4%). NoInfo: 11/2458 (0.4%). Certain keep: 2428/2458 (98.8%) ########################## YML088W (2007bp = 669AA) has 29 hits (UFO1) F-box protein Spar (test2) orthologous hit at 89% f2004/2004 (100.0%) over 2007bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1984/2002 (99.1%) over 2007bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1941/1993 (97.4%) over 2007bp for offset 0 <== THIS IS REAL YML088W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML088W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2459 (0.3%). Conflicting: 11/2459 (0.4%). NoInfo: 11/2459 (0.4%). Certain keep: 2429/2459 (98.8%) ########################## YML086C (1581bp = 527AA) has 4 hits (ALO1) D-arabinono-1,4-lactone oxidase Spar (test2) orthologous hit at 91% f1581/1581 (100.0%) over 1581bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1580/1580 (100.0%) over 1580bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1576/1580 (99.7%) over 1581bp for offset 0 <== THIS IS REAL YML086C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML086C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2460 (0.3%). Conflicting: 11/2460 (0.4%). NoInfo: 11/2460 (0.4%). Certain keep: 2430/2460 (98.8%) ########################## YML081C-A (180bp = 60AA) has 19 hits (ATP18) protein associated to the ATP synthase Spar (test2) orthologous hit at 91% f180/180 (100.0%) over 180bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f180/180 (100.0%) over 180bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f180/180 (100.0%) over 180bp for offset 0 <== THIS IS REAL YML081C-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML081C-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2461 (0.3%). Conflicting: 11/2461 (0.4%). NoInfo: 11/2461 (0.4%). Certain keep: 2431/2461 (98.8%) ########################## YML080W (1272bp = 424AA) has 7 hits (DUS1) tRNA dihydrouridine synthase Spar (test2) orthologous hit at 89% f1271/1271 (100.0%) over 1271bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1267/1270 (99.8%) over 1271bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1263/1269 (99.5%) over 1271bp for offset 0 <== THIS IS REAL YML080W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML080W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2462 (0.3%). Conflicting: 11/2462 (0.4%). NoInfo: 11/2462 (0.4%). Certain keep: 2432/2462 (98.8%) ########################## YML078W (549bp = 183AA) has 23 hits (CPR3) cyclophilin-3 (cyclosporin-sensitive ..otamase-3) (99) Spar (test2) orthologous hit at 91% f549/549 (100.0%) over 549bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f549/549 (100.0%) over 549bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f549/549 (100.0%) over 549bp for offset 0 <== THIS IS REAL YML078W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML078W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2463 (0.3%). Conflicting: 11/2463 (0.4%). NoInfo: 11/2463 (0.4%). Certain keep: 2433/2463 (98.8%) ########################## YML077W (480bp = 160AA) has 6 hits (BET5) Bet5p/18kD component of TRAPP Spar (test2) orthologous hit at 92% f480/480 (100.0%) over 480bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f480/480 (100.0%) over 480bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 86% f480/480 (100.0%) over 480bp for offset 0 <== THIS IS REAL YML077W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML077W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2464 (0.3%). Conflicting: 11/2464 (0.4%). NoInfo: 11/2464 (0.4%). Certain keep: 2434/2464 (98.8%) ########################## YML076C (2835bp = 945AA) has 20 hits (WAR1) ORF Spar (test2) orthologous hit at 88% f2835/2835 (100.0%) over 2835bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2820/2831 (99.6%) over 2835bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2760/2821 (97.8%) over 2835bp for offset 0 <== THIS IS REAL YML076C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML076C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2465 (0.3%). Conflicting: 11/2465 (0.4%). NoInfo: 11/2465 (0.4%). Certain keep: 2435/2465 (98.8%) ########################## YML075C (3165bp = 1055AA) has 17 hits (HMG1) 3-hydroxy-3-methylglutaryl-coenzyme..se isozyme (110) Spar (test2) orthologous hit at 91% f3165/3165 (100.0%) over 3165bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f3135/3161 (99.2%) over 3165bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f3137/3161 (99.2%) over 3165bp for offset 0 <== THIS IS REAL YML075C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML075C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2466 (0.3%). Conflicting: 11/2466 (0.4%). NoInfo: 11/2466 (0.4%). Certain keep: 2436/2466 (98.8%) ########################## YML074C (1236bp = 412AA) has 1715 hits (FPR3) Prolyl cis-trans isomerase, also c..e (PPIase) (149) Spar (test2) orthologous hit at 80% f1056/1213 (87.1%) over 1236bp for offset 0 Spar (test3) Longest island has f97 at 87% over 645bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f646/680 (95.0%) over 686bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 71% f816/957 (85.3%) over 984bp for offset 0 Sbay (test3) Longest island has f99 at 84% over 588bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|_______|______|______|______|_______|______|______|_______|______|__| 100f 89% 347bp 97f 87% 645bp Sp443full |========================>..................|=============================================|> 99f 84% 588bp Sb551full |.............................|=========================================|> YML074C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML074C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2467 (0.3%). Conflicting: 11/2467 (0.4%). NoInfo: 11/2467 (0.4%). Certain keep: 2437/2467 (98.8%) ########################## YML071C (1824bp = 608AA) has 477 hits (DOR1) Hypothetical ORF Spar (test2) orthologous hit at 81% f1285/1446 (88.9%) over 1471bp for offset 0 Spar (test3) Longest island has f98 at 87% over 1156bp <== THIS IS REAL Smik (test2) orthologous hit at 77% f1257/1408 (89.3%) over 1425bp for offset 1 Smik (test3) Longest island has f97 at 81% over 1169bp <== THIS IS REAL Sbay (test2) orthologous hit at 61% f775/1314 (59.0%) over 1374bp for offset 0 Sbay (test3) Longest island has f94 at 75% over 462bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k1k |___|____|____|____|____|____|____|____|____|____|____|____|____|____|____|___|____|____|_| 98f 87% 1156bp Sp443full |========================================================>..............> | 97f 81% 1169bp Sm553full |========================================================>............> | 94f 75% 462bp Sb551full |=====================>............................................> | YML071C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML071C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2468 (0.3%). Conflicting: 11/2468 (0.4%). NoInfo: 11/2468 (0.4%). Certain keep: 2438/2468 (98.8%) ########################## YML070W (1755bp = 585AA) has 17 hits (DAK1) putative dihydroxyacetone kinase Spar (test2) orthologous hit at 90% f1755/1755 (100.0%) over 1755bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1752/1754 (99.9%) over 1755bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1755/1755 (100.0%) over 1755bp for offset 0 <== THIS IS REAL YML070W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML070W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2469 (0.3%). Conflicting: 11/2469 (0.4%). NoInfo: 11/2469 (0.4%). Certain keep: 2439/2469 (98.8%) ########################## YML069W (1659bp = 553AA) has 39 hits (POB3) binds DNA polymerase delta Spar (test2) non-orthologous hit at 93% f1002/1014 (98.8%) over 1016bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1659/1659 (100.0%) over 1659bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1658/1659 (99.9%) over 1659bp for offset 0 <== THIS IS REAL YML069W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML069W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2470 (0.3%). Conflicting: 11/2470 (0.4%). NoInfo: 11/2470 (0.4%). Certain keep: 2440/2470 (98.8%) ########################## YML066C (1110bp = 370AA) has 3 hits (SMA2) Spore Membrane Assembly Spar (test2) orthologous hit at 90% f1105/1109 (99.6%) over 1110bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1107/1109 (99.8%) over 1110bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1084/1107 (97.9%) over 1110bp for offset 0 <== THIS IS REAL YML066C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML066C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2471 (0.3%). Conflicting: 11/2471 (0.4%). NoInfo: 11/2471 (0.4%). Certain keep: 2441/2471 (98.8%) ########################## YML065W (2745bp = 915AA) has 382 hits (ORC1) 120-kDa (largest) subunit of origin..and humans (203) Spar (test2) orthologous hit at 82% f2094/2362 (88.7%) over 2399bp for offset 0 Spar (test3) Longest island has f98 at 89% over 1956bp <== THIS IS REAL Smik (test2) orthologous hit at 85% f1193/1193 (100.0%) over 1193bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1985/2084 (95.2%) over 2106bp for offset 0 <== THIS IS REAL 0 100200300 400500600700 8009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k2k |__|__|__|___|__|__|__|___|__|__|___|__|__|__|___|__|__|___|__|__|__|___|__|__|__|___|__|_| 98f 89% 1956bp Sp192full |...............|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|> YML065W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML065W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2472 (0.3%). Conflicting: 11/2472 (0.4%). NoInfo: 11/2472 (0.4%). Certain keep: 2442/2472 (98.8%) ########################## YML064C (738bp = 246AA) has 8 hits (TEM1) GTP-binding protein, RAS superfamily Spar (test2) orthologous hit at 92% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f738/738 (100.0%) over 738bp for offset 0 <== THIS IS REAL YML064C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML064C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2473 (0.3%). Conflicting: 11/2473 (0.4%). NoInfo: 11/2473 (0.4%). Certain keep: 2443/2473 (98.8%) ########################## YML063W (768bp = 256AA) has 11 hits (RPS1B) Ribosomal protein S1B (rp10B) Spar (test2) orthologous hit at 98% f768/768 (100.0%) over 768bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 96% f768/768 (100.0%) over 768bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 96% f768/768 (100.0%) over 768bp for offset 0 <== THIS IS REAL YML063W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML063W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2474 (0.3%). Conflicting: 11/2474 (0.4%). NoInfo: 11/2474 (0.4%). Certain keep: 2444/2474 (98.8%) ########################## YML062C (1179bp = 393AA) has 321 hits (MFT1) mitochondrial targeting protein Spar (test2) orthologous hit at 87% f985/992 (99.3%) over 993bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1154/1175 (98.2%) over 1179bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1158/1175 (98.6%) over 1179bp for offset 0 <== THIS IS REAL YML062C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML062C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2475 (0.3%). Conflicting: 11/2475 (0.4%). NoInfo: 11/2475 (0.4%). Certain keep: 2445/2475 (98.8%) ########################## YML061C (2580bp = 860AA) has 20 hits (PIF1) 5' to 3' DNA helicase Spar (test2) orthologous hit at 90% f2580/2580 (100.0%) over 2580bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f2559/2577 (99.3%) over 2580bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2566/2577 (99.6%) over 2580bp for offset 0 <== THIS IS REAL YML061C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML061C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2476 (0.3%). Conflicting: 11/2476 (0.4%). NoInfo: 11/2476 (0.4%). Certain keep: 2446/2476 (98.8%) ########################## YML060W (1131bp = 377AA) has 4 hits (OGG1) 43-kDa 8-oxo-guanine DNA glycosylase Spar (test2) orthologous hit at 89% f1131/1131 (100.0%) over 1131bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1127/1130 (99.7%) over 1131bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1112/1127 (98.7%) over 1131bp for offset 0 <== THIS IS REAL YML060W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML060W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2477 (0.3%). Conflicting: 11/2477 (0.4%). NoInfo: 11/2477 (0.4%). Certain keep: 2447/2477 (98.8%) ########################## YML058W-A (207bp = 69AA) has 8 hits (HUG1) induced by DNA damage and replication arrest Spar (test2) orthologous hit at 92% f207/207 (100.0%) over 207bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 88% f207/207 (100.0%) over 207bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f205/205 (100.0%) over 205bp for offset 0 <== THIS IS REAL YML058W-A: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML058W-A - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2478 (0.3%). Conflicting: 11/2478 (0.4%). NoInfo: 11/2478 (0.4%). Certain keep: 2448/2478 (98.8%) ########################## YML058W (315bp = 105AA) has 4 hits (SML1) Suppressor of mec lethality Spar (test2) orthologous hit at 90% f313/315 (99.4%) over 315bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f168/168 (100.0%) over 168bp for offset 0 Smik (test3) Longest island has f100 at 87% over 168bp Sbay (test2) orthologous hit at 81% f279/287 (97.2%) over 288bp for offset 0 <== THIS IS REAL 0 100 200 300 315 |___________________________|____________________________|___________________________|____| 100f 87% 168bp Sm558brk |===============================================| YML058W: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YML058W - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2479 (0.3%). Conflicting: 11/2479 (0.4%). NoInfo: 11/2479 (0.4%). Certain keep: 2449/2479 (98.8%) ########################## YML057W (1815bp = 605AA) has 31 hits (CMP2) Catalytic A subunit of calcineurin, ..ytoplasmic (158) Flanking ORFs are: YML058W-A and YML058C-A. YML057W skipped ########################## YML055W (537bp = 179AA) has 9 hits (SPC2) subunit of signal peptidase complex, h..tein SPC25 (116) Spar (test2) non-orthologous hit at 87% f537/537 (100.0%) over 537bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f524/535 (97.9%) over 537bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f534/536 (99.6%) over 537bp for offset 0 <== THIS IS REAL YML055W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML055W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2480 (0.3%). Conflicting: 11/2480 (0.4%). NoInfo: 11/2480 (0.4%). Certain keep: 2450/2480 (98.8%) ########################## YML054C (1776bp = 592AA) has 11 hits (CYB2) Cytochrome b2 [L--lactate cytochrome..reductase] (98) Spar (test2) orthologous hit at 92% f951/1775 (53.6%) over 1776bp for offset 0 Spar (test3) Longest island has f100 at 91% over 951bp <== THIS IS REAL Smik (test2) orthologous hit at 86% f1757/1773 (99.1%) over 1776bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1772/1775 (99.8%) over 1776bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k |____|____|____|____|____|____|____|____|____|____|____|____|____|____|_____|____|____|___| 100f 91% 951bp 100f 94% 824bp Sp192full |===============================================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YML054C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML054C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2481 (0.3%). Conflicting: 11/2481 (0.4%). NoInfo: 11/2481 (0.4%). Certain keep: 2451/2481 (98.8%) ########################## YML052W (909bp = 303AA) has 8 hits (SUR7) putative integral membrane protein Spar (test2) orthologous hit at 91% f902/902 (100.0%) over 908bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f653/653 (100.0%) over 653bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f828/834 (99.3%) over 838bp for offset 0 <== THIS IS REAL YML052W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML052W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2482 (0.3%). Conflicting: 11/2482 (0.4%). NoInfo: 11/2482 (0.4%). Certain keep: 2452/2482 (98.8%) ########################## YML051W (1308bp = 436AA) has 8 hits (GAL80) transcriptional regulator Spar (test2) orthologous hit at 91% f1308/1308 (100.0%) over 1308bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f1308/1308 (100.0%) over 1308bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f1080/1106 (97.6%) over 1106bp for offset 0 <== THIS IS REAL YML051W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML051W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2483 (0.3%). Conflicting: 11/2483 (0.4%). NoInfo: 11/2483 (0.4%). Certain keep: 2453/2483 (98.8%) ########################## YML049C (4086bp = 1362AA) has 225 hits (RSE1) involved in secretion and RNA splicing Spar (test2) orthologous hit at 83% f2429/2754 (88.2%) over 2772bp for offset 2 Spar (test3) Longest island has f100 at 88% over 2327bp <== THIS IS REAL Smik (test2) orthologous hit at 82% f2636/2741 (96.2%) over 2754bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f2271/2471 (91.9%) over 2490bp for offset 1 <== THIS IS REAL 0 102030400506070809001k1k1k1k1k 1k1k1k1k1k 2k2k2k2k2k 2k2k2k2k2k 3k3k3k3k3k 3k3k3k3k3k 4k4k |_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_|_|_|_|__|_| 100f 88% 2327bp Sp192full |.|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>.......> | YML049C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML049C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2484 (0.3%). Conflicting: 11/2484 (0.4%). NoInfo: 11/2484 (0.4%). Certain keep: 2454/2484 (98.8%) ########################## YML048W (1212bp = 404AA) has 5 hits (GSF2) involved in glucose repression Spar (test2) orthologous hit at 90% f1212/1212 (100.0%) over 1212bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1212/1212 (100.0%) over 1212bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f692/692 (100.0%) over 692bp for offset 0 <== THIS IS REAL YML048W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML048W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2485 (0.3%). Conflicting: 11/2485 (0.4%). NoInfo: 11/2485 (0.4%). Certain keep: 2455/2485 (98.8%) ########################## YML047C (1059bp = 353AA) has 21 hits (PRM6) Flanking ORFs are: YML049C and YML048W-A. YML047C skipped ########################## YML046W (1890bp = 630AA) has 19 hits (PRP39) RNA splicing factor associated with U1 snRNP Spar (test2) orthologous hit at 89% f1880/1888 (99.6%) over 1890bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1880/1888 (99.6%) over 1890bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1661/1674 (99.2%) over 1676bp for offset 2 <== THIS IS REAL YML046W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML046W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2486 (0.3%). Conflicting: 11/2486 (0.4%). NoInfo: 11/2486 (0.4%). Certain keep: 2456/2486 (98.8%) ########################## YML043C (1524bp = 508AA) has 23 hits (RRN11) component of rDNA transcription factor Spar (test2) orthologous hit at 84% f1396/1501 (93.0%) over 1509bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1508/1516 (99.5%) over 1524bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1349/1376 (98.0%) over 1385bp for offset 0 <== THIS IS REAL YML043C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML043C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2487 (0.3%). Conflicting: 11/2487 (0.4%). NoInfo: 11/2487 (0.4%). Certain keep: 2457/2487 (98.8%) ########################## YML042W (2013bp = 671AA) has 5 hits (CAT2) Carnitine O-acetyltransferase, peroxi..ochondrial (103) Spar (test2) orthologous hit at 90% f2013/2013 (100.0%) over 2013bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1999/2010 (99.5%) over 2013bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2005/2011 (99.7%) over 2013bp for offset 0 <== THIS IS REAL YML042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2488 (0.3%). Conflicting: 11/2488 (0.4%). NoInfo: 11/2488 (0.4%). Certain keep: 2458/2488 (98.8%) ########################## YML041C (843bp = 281AA) has 4 hits (VPS71) Spar (test2) orthologous hit at 90% f843/843 (100.0%) over 843bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f843/843 (100.0%) over 843bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f843/843 (100.0%) over 843bp for offset 0 <== THIS IS REAL YML041C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML041C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2489 (0.3%). Conflicting: 11/2489 (0.4%). NoInfo: 11/2489 (0.4%). Certain keep: 2459/2489 (98.8%) ########################## YML038C (1329bp = 443AA) has 8 hits (YMD8) similar to vanadate resistance protein Gog5 Spar (test2) orthologous hit at 89% f1329/1329 (100.0%) over 1329bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1136/1247 (91.1%) over 1259bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f394/470 (83.8%) over 475bp for offset 0 Sbay (test3) Longest island has f99 at 81% over 373bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k1k |_____|______|______|______|_____|______|______|______|_____|______|______|______|______|_| 99f 81% 373bp Sb547brk |========================>......> | YML038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2490 (0.3%). Conflicting: 11/2490 (0.4%). NoInfo: 11/2490 (0.4%). Certain keep: 2460/2490 (98.8%) ########################## YML035C (2433bp = 811AA) has 15 hits (AMD1) putative alpha-mannosidase Spar (test2) orthologous hit at 92% f2433/2433 (100.0%) over 2433bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2433/2433 (100.0%) over 2433bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1733/1733 (100.0%) over 1733bp for offset 0 <== THIS IS REAL YML035C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML035C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2491 (0.3%). Conflicting: 11/2491 (0.4%). NoInfo: 11/2491 (0.4%). Certain keep: 2461/2491 (98.8%) ########################## YML032C (1515bp = 505AA) has 8 hits (RAD52) Required for X-ray damage repair and..mbination. (550) Spar (test2) orthologous hit at 89% f1474/1515 (97.3%) over 1515bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 85% f751/828 (90.7%) over 829bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 80% f750/832 (90.1%) over 834bp for offset 1 <== THIS IS REAL YML032C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML032C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2492 (0.3%). Conflicting: 11/2492 (0.4%). NoInfo: 11/2492 (0.4%). Certain keep: 2462/2492 (98.8%) ########################## YML031W (1968bp = 656AA) has 7 hits (NDC1) Nuclear envelope protein with multipl..ne domains (112) Spar (test2) orthologous hit at 88% f1965/1967 (99.9%) over 1968bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1961/1967 (99.7%) over 1968bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1170/1182 (99.0%) over 1186bp for offset 0 <== THIS IS REAL YML031W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML031W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2493 (0.3%). Conflicting: 11/2493 (0.4%). NoInfo: 11/2493 (0.4%). Certain keep: 2463/2493 (98.8%) ########################## YML029W (2517bp = 839AA) has 10 hits (USA1) Spar (test2) orthologous hit at 89% f2501/2512 (99.6%) over 2517bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f2210/2221 (99.5%) over 2226bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 78% f947/981 (96.5%) over 986bp for offset 0 <== THIS IS REAL YML029W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML029W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2494 (0.3%). Conflicting: 11/2494 (0.4%). NoInfo: 11/2494 (0.4%). Certain keep: 2464/2494 (98.8%) ########################## YML028W (591bp = 197AA) has 8 hits (TSA1) thioredoxin-peroxidase (TPx); reduces .. and NADPH (193) Spar (test2) orthologous hit at 95% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f591/591 (100.0%) over 591bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 100% f33/33 (100.0%) over 33bp for offset 0 Sbay (test3) Longest island has f100 at 100% over 33bp 0 100 200 300 400 500 591 |______________|______________|______________|______________|_______________|_____________| 100f 100% 33bp Sb543brk |====> | YML028W: kill: - keep: Spar Smik Not a single protein hit, and yet, certain keep YML028W - Certain Keep. Kill and Keep Spar Smik Current total: Certain kills: 8/2495 (0.3%). Conflicting: 11/2495 (0.4%). NoInfo: 11/2495 (0.4%). Certain keep: 2465/2495 (98.8%) ########################## YML027W (1158bp = 386AA) has 9 hits (YOX1) Homeobox-domain containing protein Spar (test2) orthologous hit at 90% f1155/1155 (100.0%) over 1158bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f303/303 (100.0%) over 303bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f580/603 (96.2%) over 609bp for offset 0 <== THIS IS REAL YML027W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML027W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2496 (0.3%). Conflicting: 11/2496 (0.4%). NoInfo: 11/2496 (0.4%). Certain keep: 2466/2496 (98.8%) ########################## YML022W (564bp = 188AA) has 7 hits (APT1) Adenine phosphoribosyltransferase Spar (test2) orthologous hit at 91% f564/564 (100.0%) over 564bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f558/563 (99.1%) over 564bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f560/563 (99.5%) over 564bp for offset 0 <== THIS IS REAL YML022W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML022W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2497 (0.3%). Conflicting: 11/2497 (0.4%). NoInfo: 11/2497 (0.4%). Certain keep: 2467/2497 (98.8%) ########################## YML021C (1080bp = 360AA) has 7 hits (UNG1) uracil DNA glycosylase Spar (test2) orthologous hit at 89% f1080/1080 (100.0%) over 1080bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f916/916 (100.0%) over 916bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1066/1077 (99.0%) over 1080bp for offset 0 <== THIS IS REAL YML021C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML021C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2498 (0.3%). Conflicting: 11/2498 (0.4%). NoInfo: 11/2498 (0.4%). Certain keep: 2468/2498 (98.8%) ########################## YML019W (999bp = 333AA) has 6 hits (OST6) Putative new 37kDa subunit of N-oligos..se complex (107) Spar (test2) orthologous hit at 89% f993/997 (99.6%) over 998bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f999/999 (100.0%) over 999bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f984/997 (98.7%) over 999bp for offset 0 <== THIS IS REAL YML019W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML019W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2499 (0.3%). Conflicting: 11/2499 (0.4%). NoInfo: 11/2499 (0.4%). Certain keep: 2469/2499 (98.8%) ########################## YML017W (1737bp = 579AA) has 408 hits (PSP2) (putative) involved in mRNA splicing Spar (test2) orthologous hit at 88% f1297/1301 (99.7%) over 1302bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f1472/1612 (91.3%) over 1628bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 68% f1285/1583 (81.2%) over 1630bp for offset 0 Sbay (test3) Longest island has f97 at 80% over 713bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k1k |____|____|____|____|____|_____|____|____|____|____|____|_____|____|____|____|____|_____|_| 97f 80% 713bp 85f 66% 518bp Sb540full |.|====================================>....................|=========================|> YML017W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML017W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2500 (0.3%). Conflicting: 11/2500 (0.4%). NoInfo: 11/2500 (0.4%). Certain keep: 2470/2500 (98.8%) ########################## YML016C (2079bp = 693AA) has 60 hits (PPZ1) serine-threonine phosphatase Z Spar (test2) non-orthologous hit at 92% f2079/2079 (100.0%) over 2079bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2075/2078 (99.9%) over 2079bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1100/1125 (97.8%) over 1127bp for offset 2 <== THIS IS REAL YML016C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML016C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2501 (0.3%). Conflicting: 11/2501 (0.4%). NoInfo: 11/2501 (0.4%). Certain keep: 2471/2501 (98.8%) ########################## YML015C (1041bp = 347AA) has 13 hits (TAF11) TFIID subunit Spar (test2) orthologous hit at 90% f626/626 (100.0%) over 626bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f729/744 (98.0%) over 746bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1041/1041 (100.0%) over 1041bp for offset 0 <== THIS IS REAL YML015C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML015C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2502 (0.3%). Conflicting: 11/2502 (0.4%). NoInfo: 11/2502 (0.4%). Certain keep: 2472/2502 (98.8%) ########################## YML012W (636bp = 212AA) has 6 hits (ERV25) vesicle coat component Spar (test2) orthologous hit at 94% f635/635 (100.0%) over 635bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 86% f632/635 (99.5%) over 636bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f636/636 (100.0%) over 636bp for offset 0 <== THIS IS REAL YML012W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML012W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2503 (0.3%). Conflicting: 11/2503 (0.4%). NoInfo: 11/2503 (0.4%). Certain keep: 2473/2503 (98.8%) ########################## YML010W (3192bp = 1064AA) has 546 hits (SPT5) transcription factor . YML010W skipped ########################## YML009C (213bp = 71AA) has 14 hits (MRPL39) Mitochondrial ribosomal protein MRPL39 (YmL39) Spar (test2) orthologous hit at 90% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 88% f213/213 (100.0%) over 213bp for offset 0 <== THIS IS REAL YML009C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML009C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2504 (0.3%). Conflicting: 11/2504 (0.4%). NoInfo: 11/2504 (0.4%). Certain keep: 2474/2504 (98.8%) ########################## YML008C (1152bp = 384AA) has 4 hits (ERG6) S-adenoslymethionine: delta 24-methyl..ransferase (91) Spar (test2) orthologous hit at 93% f1140/1150 (99.1%) over 1152bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 89% f1122/1148 (97.7%) over 1151bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 85% f1141/1149 (99.3%) over 1151bp for offset 0 <== THIS IS REAL YML008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2505 (0.3%). Conflicting: 11/2505 (0.4%). NoInfo: 11/2505 (0.4%). Certain keep: 2475/2505 (98.8%) ########################## YML007W (1953bp = 651AA) has 39 hits (YAP1) jun-like transcription factor Spar (test2) orthologous hit at 86% f378/406 (93.1%) over 408bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 73% f1437/1647 (87.2%) over 1679bp for offset 0 Smik (test3) Longest island has f99 at 82% over 1116bp <== THIS IS REAL Sbay (test2) orthologous hit at 61% f887/1337 (66.3%) over 1389bp for offset 0 Sbay (test3) Longest island has f93 at 73% over 301bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k |___|____|___|____|____|___|____|___|____|____|___|____|___|____|____|___|____|___|____|__| 99f 82% 1116bp Sm567full |==================================================>.........................> | 93f 73% 301bp 96f 81% 281Sb537full |============>.......................................|==========|=> YML007W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML007W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2506 (0.3%). Conflicting: 11/2506 (0.4%). NoInfo: 11/2506 (0.4%). Certain keep: 2476/2506 (98.8%) ########################## YML006C (2325bp = 775AA) has 26 hits (GIS4) CAAX box containing protein Spar (test2) non-orthologous hit at 85% f1692/1749 (96.7%) over 1761bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 68% f1750/2260 (77.4%) over 2325bp for offset 0 Smik (test3) Longest island has f98 at 85% over 713bp <== THIS IS REAL Sbay (test2) orthologous hit at 74% f2081/2289 (90.9%) over 2325bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 22k |__|___|___|___|___|___|___|__|___|___|___|___|___|___|___|__|___|___|___|___|___|___|___|| 98f 85% 713bp 99f 79% 616bp Sm567full |==========================>........................................|=====================|=> YML006C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML006C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2507 (0.3%). Conflicting: 11/2507 (0.4%). NoInfo: 11/2507 (0.4%). Certain keep: 2477/2507 (98.8%) ########################## YML004C (981bp = 327AA) has 5 hits (GLO1) lactoylglutathione lyase (glyoxalase I) Spar (test2) non-orthologous hit at 90% f981/981 (100.0%) over 981bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f973/975 (99.8%) over 976bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f967/979 (98.8%) over 981bp for offset 0 <== THIS IS REAL YML004C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML004C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2508 (0.3%). Conflicting: 11/2508 (0.4%). NoInfo: 11/2508 (0.4%). Certain keep: 2478/2508 (98.8%) ########################## YML001W (627bp = 209AA) has 29 hits (YPT7) GTP-binding protein, rab family Spar (test2) non-orthologous hit at 95% f627/627 (100.0%) over 627bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 91% f627/627 (100.0%) over 627bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 89% f627/627 (100.0%) over 627bp for offset 0 <== THIS IS REAL YML001W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YML001W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2509 (0.3%). Conflicting: 11/2509 (0.4%). NoInfo: 11/2509 (0.4%). Certain keep: 2479/2509 (98.8%) ########################## YMR001C (2118bp = 706AA) has 72 hits (CDC5) protein kinase which functions at th..M boundary (100) Spar (test2) orthologous hit at 92% f1958/1995 (98.1%) over 1995bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 89% f2118/2118 (100.0%) over 2118bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f2111/2117 (99.7%) over 2118bp for offset 0 <== THIS IS REAL YMR001C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR001C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2510 (0.3%). Conflicting: 11/2510 (0.4%). NoInfo: 11/2510 (0.4%). Certain keep: 2480/2510 (98.8%) ########################## YMR004W (1536bp = 512AA) has 18 hits (MVP1) peripheral Golgi membrane protein Spar (test2) orthologous hit at 90% f928/1534 (60.5%) over 1536bp for offset 0 Spar (test3) Longest island has f100 at 92% over 928bp <== THIS IS REAL Smik (test2) orthologous hit at 83% f1531/1535 (99.7%) over 1536bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1478/1527 (96.8%) over 1536bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k |____|_____|_____|_____|_____|_____|_____|____|_____|_____|_____|_____|_____|_____|____|__| 99f 88% 608bp 100f 92% 928bp Sp185full |==================================|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YMR004W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR004W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2511 (0.3%). Conflicting: 11/2511 (0.4%). NoInfo: 11/2511 (0.4%). Certain keep: 2481/2511 (98.8%) ########################## YMR005W (1167bp = 389AA) has 10 hits (TAF4) involved in protein synthesis Spar (test2) orthologous hit at 90% f1166/1167 (99.9%) over 1167bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1163/1167 (99.7%) over 1167bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1153/1166 (98.9%) over 1167bp for offset 0 <== THIS IS REAL YMR005W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR005W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2512 (0.3%). Conflicting: 11/2512 (0.4%). NoInfo: 11/2512 (0.4%). Certain keep: 2482/2512 (98.8%) ########################## YMR006C (2121bp = 707AA) has 18 hits (PLB2) lysophospholipase/phospholipase B Spar (test2) orthologous hit at 88% f2010/2037 (98.7%) over 2045bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2110/2117 (99.7%) over 2121bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1973/1998 (98.7%) over 2003bp for offset 0 <== THIS IS REAL YMR006C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR006C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2513 (0.3%). Conflicting: 11/2513 (0.4%). NoInfo: 11/2513 (0.4%). Certain keep: 2483/2513 (98.8%) ########################## YMR008C (1995bp = 665AA) has 45 hits (PLB1) Phospholipase B (lypophospholipase) Spar (test2) orthologous hit at 90% f1878/1878 (100.0%) over 1878bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1863/1863 (100.0%) over 1866bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1862/1867 (99.7%) over 1868bp for offset 0 <== THIS IS REAL YMR008C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR008C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2514 (0.3%). Conflicting: 11/2514 (0.4%). NoInfo: 11/2514 (0.4%). Certain keep: 2484/2514 (98.8%) ########################## YMR011W (1626bp = 542AA) has 111 hits (HXT2) high affinity hexose transporter-2 Spar (test2) orthologous hit at 93% f1626/1626 (100.0%) over 1626bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1054/1626 (64.8%) over 1626bp for offset 0 Smik (test3) Longest island has f100 at 90% over 1054bp <== THIS IS REAL Sbay (test2) orthologous hit at 86% f1618/1625 (99.6%) over 1626bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k1k |____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|____|_____|_____|____|_| 100f 90% 1054bp 100f 91% 572bp Sm568full |=========================================================|ooooooooooooooooooooooooooooooo| YMR011W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR011W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2515 (0.3%). Conflicting: 11/2515 (0.4%). NoInfo: 11/2515 (0.4%). Certain keep: 2485/2515 (98.8%) ########################## YMR012W (3834bp = 1278AA) has 17 hits (CLU1) translation initiation factor eIF3 subunit Spar (test2) orthologous hit at 91% f2169/2200 (98.6%) over 2204bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 86% f3680/3830 (96.1%) over 3834bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f3731/3822 (97.6%) over 3834bp for offset 0 <== THIS IS REAL YMR012W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR012W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2516 (0.3%). Conflicting: 11/2516 (0.4%). NoInfo: 11/2516 (0.4%). Certain keep: 2486/2516 (98.8%) ########################## YMR013C (1560bp = 520AA) has 11 hits (SEC59) membrane protein required for core ..cosylation (93) Spar (test2) non-orthologous hit at 89% f1560/1560 (100.0%) over 1560bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 84% f1560/1560 (100.0%) over 1560bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f1538/1556 (98.8%) over 1560bp for offset 0 <== THIS IS REAL YMR013C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR013C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2517 (0.3%). Conflicting: 11/2517 (0.4%). NoInfo: 11/2517 (0.4%). Certain keep: 2487/2517 (98.8%) ########################## YMR014W (1560bp = 520AA) has 102 hits (BUD22) Spar (test2) orthologous hit at 88% f1555/1559 (99.7%) over 1560bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f1555/1557 (99.9%) over 1558bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1400/1440 (97.2%) over 1455bp for offset 0 <== THIS IS REAL YMR014W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR014W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2518 (0.3%). Conflicting: 11/2518 (0.4%). NoInfo: 11/2518 (0.4%). Certain keep: 2488/2518 (98.8%) ########################## YMR015C (1617bp = 539AA) has 6 hits (ERG5) cytochrome P450 involved in C-22 dena..side-chain (117) Spar (test2) orthologous hit at 93% f1617/1617 (100.0%) over 1617bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 90% f1617/1617 (100.0%) over 1617bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 87% f1614/1616 (99.9%) over 1617bp for offset 0 <== THIS IS REAL YMR015C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR015C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2519 (0.3%). Conflicting: 11/2519 (0.4%). NoInfo: 11/2519 (0.4%). Certain keep: 2489/2519 (98.8%) ########################## YMR016C (2358bp = 786AA) has 125 hits (SOK2) displays homologies to several tran..on factors (97) Spar (test2) orthologous hit at 80% f1967/2143 (91.8%) over 2167bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 75% f2146/2328 (92.2%) over 2358bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1957/2111 (92.7%) over 2147bp for offset 0 <== THIS IS REAL YMR016C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR016C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2520 (0.3%). Conflicting: 11/2520 (0.4%). NoInfo: 11/2520 (0.4%). Certain keep: 2490/2520 (98.8%) ########################## YMR017W (1194bp = 398AA) has 12 hits (SPO20) DBF2 Interacting Protein; SNAP 25 homolog Spar (test2) orthologous hit at 83% f1153/1184 (97.4%) over 1188bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f1155/1189 (97.1%) over 1194bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f735/794 (92.6%) over 803bp for offset 2 <== THIS IS REAL YMR017W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR017W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2521 (0.3%). Conflicting: 11/2521 (0.4%). NoInfo: 11/2521 (0.4%). Certain keep: 2491/2521 (98.8%) ########################## YMR019W (2850bp = 950AA) has 15 hits (STB4) Binds Sin3p in two-hybrid assay Spar (test2) orthologous hit at 86% f2770/2848 (97.3%) over 2850bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f2594/2635 (98.4%) over 2642bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f2672/2822 (94.7%) over 2848bp for offset 0 <== THIS IS REAL YMR019W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR019W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2522 (0.3%). Conflicting: 11/2522 (0.4%). NoInfo: 11/2522 (0.4%). Certain keep: 2492/2522 (98.8%) ########################## YMR020W (1527bp = 509AA) has 8 hits (FMS1) Multicopy suppressor of fenpropimorph..otein CBP1 (179) Spar (test2) non-orthologous hit at 88% f1438/1444 (99.6%) over 1446bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1193/1272 (93.8%) over 1274bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1483/1516 (97.8%) over 1527bp for offset 0 <== THIS IS REAL YMR020W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR020W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2523 (0.3%). Conflicting: 11/2523 (0.4%). NoInfo: 11/2523 (0.4%). Certain keep: 2493/2523 (98.8%) ########################## YMR021C (1254bp = 418AA) has 9 hits (MAC1) metal-binding transcriptional activator Spar (test2) orthologous hit at 91% f363/416 (87.3%) over 425bp for offset 1 Spar (test3) Longest island has f100 at 94% over 355bp <== THIS IS REAL Smik (test2) orthologous hit at 84% f1246/1252 (99.5%) over 1253bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f691/725 (95.3%) over 733bp for offset 1 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k |______|______|______|______|______|_______|______|______|______|______|______|_______|___| 100f 94% 355bp Sp182brk |....|ooooooooooooooooooooooooo| YMR021C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR021C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2524 (0.3%). Conflicting: 11/2524 (0.4%). NoInfo: 11/2524 (0.4%). Certain keep: 2494/2524 (98.8%) ########################## YMR022W (498bp = 166AA) has 11 hits (QRI8) ubiquitin conjugating enzyme Spar (test2) orthologous hit at 93% f429/429 (100.0%) over 429bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f498/498 (100.0%) over 498bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 84% f498/498 (100.0%) over 498bp for offset 0 <== THIS IS REAL YMR022W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR022W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2525 (0.3%). Conflicting: 11/2525 (0.4%). NoInfo: 11/2525 (0.4%). Certain keep: 2495/2525 (98.8%) ########################## YMR023C (1581bp = 527AA) has 11 hits (MSS1) putative mitochondrial GTPase Spar (test2) orthologous hit at 87% f1573/1580 (99.6%) over 1581bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 80% f1420/1428 (99.4%) over 1430bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 76% f1540/1572 (98.0%) over 1580bp for offset 0 <== THIS IS REAL YMR023C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR023C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2526 (0.3%). Conflicting: 11/2526 (0.4%). NoInfo: 11/2526 (0.4%). Certain keep: 2496/2526 (98.8%) ########################## YMR024W (1173bp = 391AA) has 5 hits (MRPL3) Mitochondrial ribosomal protein MRPL3 (YmL3) Spar (test2) orthologous hit at 91% f1163/1171 (99.3%) over 1172bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 85% f1155/1163 (99.3%) over 1163bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1163/1164 (99.9%) over 1164bp for offset 0 <== THIS IS REAL YMR024W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR024W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2527 (0.3%). Conflicting: 11/2527 (0.4%). NoInfo: 11/2527 (0.4%). Certain keep: 2497/2527 (98.8%) ########################## YMR026C (1200bp = 400AA) has 8 hits (PEX12) C3HC4 zinc-binding integral peroxiso..ne protein (100) Spar (test2) orthologous hit at 86% f1200/1200 (100.0%) over 1200bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f1187/1197 (99.2%) over 1200bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1161/1195 (97.2%) over 1200bp for offset 0 <== THIS IS REAL YMR026C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR026C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2528 (0.3%). Conflicting: 11/2528 (0.4%). NoInfo: 11/2528 (0.4%). Certain keep: 2498/2528 (98.8%) ########################## YMR027W (1413bp = 471AA) has 6 hits (HRT2) High level expression reduced Ty3 Transposition Spar (test2) orthologous hit at 88% f1404/1412 (99.4%) over 1413bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1405/1405 (100.0%) over 1405bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1390/1408 (98.7%) over 1413bp for offset 0 <== THIS IS REAL YMR027W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR027W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2529 (0.3%). Conflicting: 11/2529 (0.4%). NoInfo: 11/2529 (0.4%). Certain keep: 2499/2529 (98.8%) ########################## YMR028W (1101bp = 367AA) has 11 hits (TAP42) 42 kDa protein that pysically assoc..c subunits (147) Spar (test2) orthologous hit at 86% f233/233 (100.0%) over 233bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1093/1099 (99.5%) over 1101bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1097/1100 (99.7%) over 1101bp for offset 0 <== THIS IS REAL YMR028W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR028W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2530 (0.3%). Conflicting: 11/2530 (0.4%). NoInfo: 11/2530 (0.4%). Certain keep: 2500/2530 (98.8%) ########################## YMR032W (2010bp = 670AA) has 9 hits (HOF1) SH3 domain containing-protein Spar (test2) orthologous hit at 88% f2006/2009 (99.9%) over 2010bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f1500/1527 (98.2%) over 1534bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f1985/2002 (99.2%) over 2010bp for offset 0 <== THIS IS REAL YMR032W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR032W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2531 (0.3%). Conflicting: 11/2531 (0.4%). NoInfo: 11/2531 (0.4%). Certain keep: 2501/2531 (98.8%) ########################## YMR035W (534bp = 178AA) has 4 hits (IMP2) mitochondrial inner membrane protease Spar (test2) orthologous hit at 91% f534/534 (100.0%) over 534bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f516/529 (97.5%) over 534bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f530/533 (99.4%) over 534bp for offset 0 <== THIS IS REAL YMR035W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR035W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2532 (0.3%). Conflicting: 11/2532 (0.4%). NoInfo: 11/2532 (0.4%). Certain keep: 2502/2532 (98.8%) ########################## YMR036C (1665bp = 555AA) has 13 hits (MIH1) homolog of S. pombe cdc25 Spar (test2) orthologous hit at 88% f1653/1658 (99.7%) over 1665bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f1372/1375 (99.8%) over 1376bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f785/799 (98.2%) over 801bp for offset 2 <== THIS IS REAL YMR036C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR036C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2533 (0.3%). Conflicting: 11/2533 (0.4%). NoInfo: 11/2533 (0.4%). Certain keep: 2503/2533 (98.8%) ########################## YMR037C (2115bp = 705AA) has 22 hits (MSN2) zinc finger protein Spar (test2) orthologous hit at 88% f2110/2114 (99.8%) over 2115bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f2102/2110 (99.6%) over 2115bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 79% f1035/1066 (97.1%) over 1067bp for offset 1 <== THIS IS REAL YMR037C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR037C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2534 (0.3%). Conflicting: 11/2534 (0.4%). NoInfo: 11/2534 (0.4%). Certain keep: 2504/2534 (98.8%) ########################## YMR038C (750bp = 250AA) has 5 hits (LYS7) copper chaperone for superoxide dismutase Sod1p Spar (test2) orthologous hit at 86% f465/465 (100.0%) over 465bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 84% f742/749 (99.1%) over 750bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f750/750 (100.0%) over 750bp for offset 0 <== THIS IS REAL YMR038C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR038C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2535 (0.3%). Conflicting: 11/2535 (0.4%). NoInfo: 11/2535 (0.4%). Certain keep: 2505/2535 (98.8%) ########################## YMR039C (879bp = 293AA) has 96 hits (SUB1) transcriptional coactivator Spar (test2) orthologous hit at 91% f869/873 (99.5%) over 879bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f506/592 (85.5%) over 605bp for offset 0 Smik (test3) Longest island has f95 at 80% over 520bp <== THIS IS REAL Sbay (test2) orthologous hit at 80% f632/651 (97.1%) over 662bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 879 |_________|_________|_________|_________|__________|_________|_________|_________|________| 95f 80% 520bp Sm577brk |........|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YMR039C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR039C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2536 (0.3%). Conflicting: 11/2536 (0.4%). NoInfo: 11/2536 (0.4%). Certain keep: 2506/2536 (98.8%) ########################## YMR042W (534bp = 178AA) has 23 hits (ARG80) transcription factor Spar (test2) orthologous hit at 85% f421/435 (96.8%) over 435bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f407/433 (94.0%) over 434bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f351/469 (74.8%) over 484bp for offset 1 Sbay (test3) Longest island has f92 at 77% over 308bp <== THIS IS REAL 0 100 200 300 400 500 534 |_______________|________________|________________|________________|________________|_____| 92f 77% 308bp Sb579full |.........................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx>...>| YMR042W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR042W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2537 (0.3%). Conflicting: 11/2537 (0.4%). NoInfo: 11/2537 (0.4%). Certain keep: 2507/2537 (98.8%) ########################## YMR043W (861bp = 287AA) has 1596 hits (MCM1) transcription factor containing the.. complexes (242) Spar (test2) orthologous hit at 89% f724/746 (97.1%) over 750bp for offset 2 <== THIS IS REAL Smik (test2) orthologous hit at 72% f623/719 (86.6%) over 736bp for offset 0 Smik (test3) Longest island has f99 at 86% over 402bp <== THIS IS REAL Sbay (test2) orthologous hit at 70% f623/782 (79.7%) over 805bp for offset 0 Sbay (test3) Longest island has f99 at 82% over 419bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 861 |_________|_________|__________|_________|__________|_________|__________|_________|______| 99f 86% 402bp 83f 64% 210bp Sm578full |=========================================>.............|=====================> | 99f 82% 419bp Sb579full |==========================================>........................................> | YMR043W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR043W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2538 (0.3%). Conflicting: 11/2538 (0.4%). NoInfo: 11/2538 (0.4%). Certain keep: 2508/2538 (98.8%) ########################## YMR044W (1428bp = 476AA) has 167 hits (IOC4) ISWI One Complex Spar (test2) orthologous hit at 77% f823/948 (86.8%) over 967bp for offset 0 Spar (test3) Longest island has f95 at 83% over 778bp <== THIS IS REAL Smik (test2) orthologous hit at 77% f703/780 (90.1%) over 787bp for offset 1 <== THIS IS REAL Sbay (test2) orthologous hit at 67% f1007/1282 (78.5%) over 1321bp for offset 0 Sbay (test3) Longest island has f92 at 76% over 912bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k1k |_____|_____|_____|______|_____|_____|______|_____|_____|______|_____|_____|_____|______|_| 95f 83% 778bp Sp178full |............|===============================================|> 92f 76% 912bp Sb579full |............................|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx|xx> YMR044W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR044W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2539 (0.3%). Conflicting: 11/2539 (0.4%). NoInfo: 11/2539 (0.4%). Certain keep: 2509/2539 (98.8%) ########################## YMR047C (3342bp = 1114AA) has 52 hits (NUP116) Nuclear pore complex protein that..to Nup100p (175) Spar (test2) orthologous hit at 84% f1583/1622 (97.6%) over 1641bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f2692/2744 (98.1%) over 2758bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f2942/3212 (91.6%) over 3254bp for offset 0 <== THIS IS REAL YMR047C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR047C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2540 (0.3%). Conflicting: 11/2540 (0.4%). NoInfo: 11/2540 (0.4%). Certain keep: 2510/2540 (98.8%) ########################## YMR048W (954bp = 318AA) has 9 hits (CSM3) Protein required for meiotic chromosom..egregation (93) Spar (test2) orthologous hit at 85% f942/952 (98.9%) over 953bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 77% f913/942 (96.9%) over 953bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 69% f702/924 (76.0%) over 946bp for offset 0 Sbay (test3) Longest island has f98 at 80% over 522bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 954 |________|________|_________|________|_________|________|_________|________|________|_____| 98f 80% 522bp Sb579full |================================================>.......................................>| YMR048W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR048W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2541 (0.3%). Conflicting: 11/2541 (0.4%). NoInfo: 11/2541 (0.4%). Certain keep: 2511/2541 (98.8%) ########################## YMR049C (2424bp = 808AA) has 46 hits (ERB1) conserved eukaryotic protein involve..biogenesis (104) Spar (test2) orthologous hit at 91% f2421/2421 (100.0%) over 2421bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2421/2421 (100.0%) over 2421bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2331/2419 (96.4%) over 2424bp for offset 2 <== THIS IS REAL YMR049C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR049C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2542 (0.3%). Conflicting: 11/2542 (0.4%). NoInfo: 11/2542 (0.4%). Certain keep: 2512/2542 (98.8%) ########################## YMR052W (615bp = 205AA) has 50 hits (FAR3) involved in the cell cycle Flanking ORFs are: YMR048W and YMR050C. YMR052W skipped ########################## YMR053C (2553bp = 851AA) has 13 hits (STB2) Sin3p binding protein Flanking ORFs are: YMR048W and YMR050C. YMR053C skipped ########################## YMR054W (2673bp = 891AA) has 20 hits (STV1) vacuolar ATPase V0 domain subunit a (110 kDa) Spar (test2) orthologous hit at 92% f355/355 (100.0%) over 355bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f2445/2445 (100.0%) over 2445bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f2646/2667 (99.2%) over 2673bp for offset 0 <== THIS IS REAL YMR054W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR054W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2543 (0.3%). Conflicting: 11/2543 (0.4%). NoInfo: 11/2543 (0.4%). Certain keep: 2513/2543 (98.8%) ########################## YMR055C (921bp = 307AA) has 7 hits (BUB2) involved in cell cycle checkpoint Spar (test2) orthologous hit at 90% f921/921 (100.0%) over 921bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f920/920 (100.0%) over 920bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f551/551 (100.0%) over 551bp for offset 0 <== THIS IS REAL YMR055C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR055C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2544 (0.3%). Conflicting: 11/2544 (0.4%). NoInfo: 11/2544 (0.4%). Certain keep: 2514/2544 (98.8%) ########################## YMR056C (930bp = 310AA) has 13 hits (AAC1) mitochondrial ADP/ATP translocator Spar (test2) orthologous hit at 90% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f930/930 (100.0%) over 930bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 73% f294/597 (49.2%) over 601bp for offset 0 Sbay (test3) Longest island has f92 at 82% over 262bp Sbay (test2) orthologous hit at 76% f485/549 (88.3%) over 554bp for offset 1 Sbay (test3) Longest island has f100 at 81% over 471bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900930 |________|_________|_________|________|_________|_________|________|_________|_________|__| 92f 82% 262bp 100f 79% 218bp Sb579full |========================>|oooooooooooooooooooo>..........> | 100f 81% 471bp Sb579full |........|oooooooooooooooooooooooooooooooooooooooooooo| YMR056C: kill: Sbay - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR056C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2545 (0.3%). Conflicting: 11/2545 (0.4%). NoInfo: 11/2545 (0.4%). Certain keep: 2515/2545 (98.8%) ########################## YMR058W (1911bp = 637AA) has 15 hits (FET3) multicopper oxidase Spar (test2) orthologous hit at 91% f1652/1655 (99.8%) over 1655bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f1911/1911 (100.0%) over 1911bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f1448/1553 (93.2%) over 1563bp for offset 0 <== THIS IS REAL YMR058W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR058W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2546 (0.3%). Conflicting: 11/2546 (0.4%). NoInfo: 11/2546 (0.4%). Certain keep: 2516/2546 (98.8%) ########################## YMR059W (447bp = 149AA) has 6 hits (SEN15) 15kDa subunit of the tetrameric tRNA ..donuclease (101) Spar (test2) orthologous hit at 85% f447/447 (100.0%) over 447bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 80% f408/442 (92.3%) over 444bp for offset 2 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f403/438 (92.0%) over 441bp for offset 0 <== THIS IS REAL YMR059W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR059W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2547 (0.3%). Conflicting: 11/2547 (0.4%). NoInfo: 11/2547 (0.4%). Certain keep: 2517/2547 (98.8%) ########################## YMR060C (984bp = 328AA) has 14 hits (TOM37) mitochondrial import receptor, heter..chaperones (221) Spar (test2) orthologous hit at 87% f981/983 (99.8%) over 984bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 79% f970/981 (98.9%) over 984bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 78% f947/980 (96.6%) over 984bp for offset 0 <== THIS IS REAL YMR060C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR060C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2548 (0.3%). Conflicting: 11/2548 (0.4%). NoInfo: 11/2548 (0.4%). Certain keep: 2518/2548 (98.8%) ########################## YMR061W (2034bp = 678AA) has 24 hits (RNA14) component of the cleavage and polya..processing (141) Spar (test2) orthologous hit at 92% f1856/1856 (100.0%) over 1856bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 88% f2033/2033 (100.0%) over 2033bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1278/1329 (96.2%) over 1339bp for offset 0 <== THIS IS REAL YMR061W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR061W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2549 (0.3%). Conflicting: 11/2549 (0.4%). NoInfo: 11/2549 (0.4%). Certain keep: 2519/2549 (98.8%) ########################## YMR062C (1326bp = 442AA) has 4 hits (ECM40) acetylornithine acetyltransferase Spar (test2) orthologous hit at 91% f1325/1325 (100.0%) over 1325bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 86% f1326/1326 (100.0%) over 1326bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 80% f1304/1323 (98.6%) over 1326bp for offset 0 <== THIS IS REAL YMR062C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR062C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2550 (0.3%). Conflicting: 11/2550 (0.4%). NoInfo: 11/2550 (0.4%). Certain keep: 2520/2550 (98.8%) ########################## YMR063W (720bp = 240AA) has 4 hits (RIM9) involved in sporulation Spar (test2) orthologous hit at 90% f720/720 (100.0%) over 720bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f720/720 (100.0%) over 720bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f705/717 (98.3%) over 720bp for offset 0 <== THIS IS REAL YMR063W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR063W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2551 (0.3%). Conflicting: 11/2551 (0.4%). NoInfo: 11/2551 (0.4%). Certain keep: 2521/2551 (98.8%) ########################## YMR064W (1557bp = 519AA) has 6 hits (AEP1) basic, hydrophilic protein of 59 kDa Spar (test2) orthologous hit at 84% f1554/1556 (99.9%) over 1557bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 76% f1557/1557 (100.0%) over 1557bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 72% f1421/1537 (92.5%) over 1557bp for offset 2 <== THIS IS REAL YMR064W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR064W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2552 (0.3%). Conflicting: 11/2552 (0.4%). NoInfo: 11/2552 (0.4%). Certain keep: 2522/2552 (98.8%) ########################## YMR065W (1515bp = 505AA) has 15 hits (KAR5) coiled-coil membrane protein Spar (test2) orthologous hit at 87% f1499/1509 (99.3%) over 1511bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1172/1206 (97.2%) over 1207bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1487/1503 (98.9%) over 1507bp for offset 0 <== THIS IS REAL YMR065W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR065W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2553 (0.3%). Conflicting: 11/2553 (0.4%). NoInfo: 11/2553 (0.4%). Certain keep: 2523/2553 (98.8%) ########################## YMR066W (2697bp = 899AA) has 38 hits (SOV1) (putative) involved in respiration Spar (test2) orthologous hit at 86% f2029/2074 (97.8%) over 2078bp for offset 1 <== THIS IS REAL Smik (test2) orthologous hit at 79% f2650/2689 (98.5%) over 2696bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 74% f2632/2685 (98.0%) over 2697bp for offset 0 <== THIS IS REAL YMR066W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR066W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2554 (0.3%). Conflicting: 11/2554 (0.4%). NoInfo: 11/2554 (0.4%). Certain keep: 2524/2554 (98.8%) ########################## YMR070W (1473bp = 491AA) has 1571 hits (MOT3) 2 Cys2-His2 zinc fingers at c-term..agine rich (115) Spar (test2) orthologous hit at 76% f1250/1439 (86.9%) over 1470bp for offset 0 Spar (test3) Longest island has f96 at 84% over 1108bp <== THIS IS REAL Smik (test2) orthologous hit at 76% f439/442 (99.3%) over 451bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 64% f764/967 (79.0%) over 983bp for offset 0 Sbay (test3) Longest island has f99 at 75% over 528bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k |_____|_____|_____|_____|_____|_____|_____|_____|_____|______|_____|_____|_____|_____|____| 96f 84% 1108bp Sp173full |.......................|=================================================================|> 99f 75% 528bp Sb576brk |............................|===============================> | YMR070W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR070W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2555 (0.3%). Conflicting: 11/2555 (0.4%). NoInfo: 11/2555 (0.4%). Certain keep: 2525/2555 (98.8%) ########################## YMR072W (552bp = 184AA) has 8 hits (ABF2) HMG-1 homolog, mitochondrial Spar (test2) orthologous hit at 90% f550/550 (100.0%) over 550bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f550/550 (100.0%) over 550bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 79% f544/550 (98.9%) over 551bp for offset 0 <== THIS IS REAL YMR072W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR072W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2556 (0.3%). Conflicting: 11/2556 (0.4%). NoInfo: 11/2556 (0.4%). Certain keep: 2526/2556 (98.8%) ########################## YMR076C (3834bp = 1278AA) has 60 hits (PDS5) (putative) involved in sister chrom..ng mitosis (109) Spar (test2) non-orthologous hit at 89% f3834/3834 (100.0%) over 3834bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 82% f87/91 (95.6%) over 92bp for offset 0 Smik (test3) Longest island has f100 at 83% over 87bp Sbay (test2) orthologous hit at 81% f3793/3831 (99.0%) over 3834bp for offset 0 <== THIS IS REAL 0 1020030405006070800901k1k 1k1k1k 1k1k1k 1k1k2k 2k2k2k 2k2k 2k2k2k 2k3k3k 3k3k3k 3k3k3k 33k |_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|_|__|_|__|_|_|__|_|_|__|_|_|__|_|_|__|| 100f 83% 87bp Sm1013brk |=> | YMR076C: kill: - keep: Spar Sbay Not a single protein hit, and yet, certain keep YMR076C - Certain Keep. Kill and Keep Spar Sbay Current total: Certain kills: 8/2557 (0.3%). Conflicting: 11/2557 (0.4%). NoInfo: 11/2557 (0.4%). Certain keep: 2527/2557 (98.8%) ########################## YMR077C (666bp = 222AA) has 30 hits (VPS20) vaculolar protein sorting (putative) Spar (test2) non-orthologous hit at 89% f666/666 (100.0%) over 666bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 81% f647/662 (97.7%) over 666bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 77% f647/662 (97.7%) over 664bp for offset 0 <== THIS IS REAL YMR077C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR077C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2558 (0.3%). Conflicting: 11/2558 (0.4%). NoInfo: 11/2558 (0.4%). Certain keep: 2528/2558 (98.8%) ########################## YMR078C (2226bp = 742AA) has 12 hits (CTF18) (putative) involved in chromosome t..ng mitosis (106) Spar (test2) orthologous hit at 87% f1300/1498 (86.8%) over 1501bp for offset 0 Spar (test3) Longest island has f98 at 88% over 1322bp <== THIS IS REAL Smik (test2) orthologous hit at 81% f2196/2220 (98.9%) over 2226bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 77% f1579/1657 (95.3%) over 1666bp for offset 0 <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k2k |___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|___|_| 98f 88% 1322bp Sp171brk |====================================================>......> | YMR078C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR078C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2559 (0.3%). Conflicting: 11/2559 (0.4%). NoInfo: 11/2559 (0.4%). Certain keep: 2529/2559 (98.8%) ########################## YMR080C (2916bp = 972AA) has 20 hits (NAM7) putative helicase Spar (test2) orthologous hit at 92% f1617/1643 (98.4%) over 1643bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 87% f2907/2914 (99.8%) over 2916bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 83% f2489/2911 (85.5%) over 2916bp for offset 2 Sbay (test3) Longest island has f100 at 84% over 2497bp <== THIS IS REAL 0 1002003004005006007008009001k 1k 1k 1k 1k 1k 1k 1k 1k 1k 2k 2k 2k 2k 2k 2k 2k 2k 2k 22k |__|__|__|__|__|__|__|__|__|__|__|___|__|__|__|__|__|__|__|__|__|__|__|___|__|__|__|__|__|| 99f 84% 419bp100f 84% 2497bp Sb573full |===========>|xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx| YMR080C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR080C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2560 (0.3%). Conflicting: 11/2560 (0.4%). NoInfo: 11/2560 (0.4%). Certain keep: 2530/2560 (98.8%) ########################## YMR081C (1017bp = 339AA) has 11 hits (ISF1) involved in mitochondrial RNA splicing Spar (test2) non-orthologous hit at 86% f934/957 (97.6%) over 960bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 78% f919/950 (96.7%) over 958bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 72% f447/513 (87.1%) over 529bp for offset 1 Sbay (test3) Longest island has f93 at 74% over 474bp <== THIS IS REAL 0 100 200 300 400 500 600 700 800 900 1k1k |_______|________|________|________|________|________|_______|________|________|________|_| 93f 74% 474bp Sb573full |...|ooooooooooooooooooooooooooooooooooooooooo> | YMR081C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR081C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2561 (0.3%). Conflicting: 11/2561 (0.4%). NoInfo: 11/2561 (0.4%). Certain keep: 2531/2561 (98.8%) ########################## YMR083W (1128bp = 376AA) has 19 hits (ADH3) alcohol dehydrogenase isoenzyme III Spar (test2) non-orthologous hit at 92% f1128/1128 (100.0%) over 1128bp for offset 0 <== THIS IS REAL Smik (test2) non-orthologous hit at 75% f1033/1052 (98.2%) over 1058bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 86% f1128/1128 (100.0%) over 1128bp for offset 0 <== THIS IS REAL YMR083W: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR083W - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2562 (0.3%). Conflicting: 11/2562 (0.4%). NoInfo: 11/2562 (0.4%). Certain keep: 2532/2562 (98.8%) ########################## YMR089C (2478bp = 826AA) has 119 hits (YTA12) mitochondrial membrane ATPase of t..AA) family (112) Spar (test2) orthologous hit at 90% f2478/2478 (100.0%) over 2478bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f2460/2476 (99.4%) over 2478bp for offset 0 <== THIS IS REAL Sbay (test2) non-orthologous hit at 84% f1346/1379 (97.6%) over 1380bp for offset 0 <== THIS IS REAL YMR089C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR089C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2563 (0.3%). Conflicting: 11/2563 (0.4%). NoInfo: 11/2563 (0.4%). Certain keep: 2533/2563 (98.8%) ########################## YMR091C (1308bp = 436AA) has 202 hits (NPL6) involved in nuclear protein targeting Spar (test2) orthologous hit at 91% f1304/1308 (99.7%) over 1308bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 85% f1281/1304 (98.2%) over 1307bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 82% f1006/1009 (99.7%) over 1009bp for offset 0 <== THIS IS REAL YMR091C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR091C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2564 (0.3%). Conflicting: 11/2564 (0.4%). NoInfo: 11/2564 (0.4%). Certain keep: 2534/2564 (98.8%) ########################## YMR092C (1848bp = 616AA) has 5 hits (AIP1) actin cortical patch component Spar (test2) orthologous hit at 89% f1846/1846 (100.0%) over 1846bp for offset 0 <== THIS IS REAL Smik (test2) orthologous hit at 83% f1840/1846 (99.7%) over 1848bp for offset 0 <== THIS IS REAL Sbay (test2) orthologous hit at 81% f1733/1841 (94.1%) over 1848bp for offset 0 <== THIS IS REAL YMR092C: kill: - keep: Spar Smik Sbay Not a single protein hit, and yet, certain keep YMR092C - Certain Keep. Kill and Keep Spar Smik Sbay Current total: Certain kills: 8/2565 (0.3%). Conflicting: 11/2565 (0.4%). NoInfo: 11/2565 (0.4%). Certain keep: 2535/2565 (98.8%) ########################## YMR093W (1542bp = 514AA) has 5 hits (UTP15) Protein required for cell viability Spar (test2) orthologous hit at 91% f154