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Analysis Tools: Differential Expression



Step1: Tools
Step1: Select a tool


Differential Expression Heat map visualization and tabular results showing the differentially expressed genes.
Tutorial Multimedia Tutorial
GENE-E A high performance visualization and analysis tool for RNAi and gene expression data.
Tutorial Multimedia Tutorial
Gene Neighbors Heat map visualization showing gene expression values for co-expressed genes.
Tutorial Multimedia Tutorial
Gene Set Enrichment Analysis (GSEA) A report showing pathway gene sets correlated with phenotype classes of interest.
Tutorial Multimedia Tutorial
GSEA By Gene Profile A report showing pathway gene sets correlated with the expression profile of a gene of interest.
Tutorial Multimedia Tutorial
Integrative Genomics Viewer (IGV) A high performance integrated visualization of copy number, gene expression, phenotype and other genomic data.
Tutorial Multimedia Tutorial