Gene Set: V$USF2_Q6

Standard name V$USF2_Q6
Systematic name M17508
Brief description Genes with promoter regions [-2kb,2kb] around transcription start site containing motif CASGYG. Motif does not match any known transcription factor
Full description or abstract XX
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FA USF-1:USF-2
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SY CIIIB1.
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OS rat, Rattus norvegicus
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; rodentia; myomorpha; muridae; murinae
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CL C0012; bHLH-ZIP.
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SF heterodimer;
SF for individual polypeptides see rat USF-1 and rat USF-2 ;
SF previously known nuclear activity CIIIB1 was identified with USF-1/USF-2
SF heterodimers [2];
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FF activator of apolipoprotein genes apoCIII and apoAII [3] [2] [1]
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RN [1]; RE0018051.
RX MEDLINE; 21964065.
RA Pastier D., Lacorte J.-M., Chambaz J., Cardot P., Ribeiro A.
RT Two initiator-like elements are required for the combined activation of the
RT human apolipoprotein C-III promoter by upstream stimulatory factor and
RT hepatic nuclear factor-4.
RL J. Biol. Chem. 277:15199-15206 (2002).
RN [2]; RE0016829.
RX MEDLINE; 99098855.
RA Ribeiro A., Pastier D., Kardassis D., Chambaz J., Cardot P.
RT Cooperative binding of upstream stimulatory factor and hepatic nuclear
RT factor 4 drives the transcription of the human apolipoprotein A-II gene.
RL J. Biol. Chem. 274:1216-1225 (1999).
RN [3]; RE0000992.
RX MEDLINE; 91236737.
RA Ogami K., Kardassis D., Cladaras C., Zannis V. I.
RT Purification and characterization of a heat stable nuclear factor CIIIB1
RT involved in the regulation of the human apoC-III gene
RL J. Biol. Chem. 266:9640-9646 (1991).
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Collection C3: motif gene sets
      TFT: transcription factor targets
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Organism Homo sapiens
Contributed by Xiaohui Xie (Broad Institute)
Source platform HUMAN_GENE_SYMBOL
Dataset references  
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Compute overlaps C1: positional gene sets
C2: curated gene sets
      CGP: chemical and genetic perturbations
      CP: canonical pathways
            CP:BIOCARTA: BioCarta gene sets
            CP:KEGG: KEGG gene sets
            CP:REACTOME: Reactome gene sets
C3: motif gene sets
      MIR: microRNA targets
      TFT: transcription factor targets
C4: computational gene sets
      CGN: cancer gene neighborhoods
      CM: cancer modules
C5: GO gene sets
      BP: GO biological process
      CC: GO cellular component
      MF: GO molecular function
Compendia expression profiles Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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