Gene Set: V$SP1_Q4_01

Standard name V$SP1_Q4_01
Systematic name M9300
Brief description Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif NNGGGGCGGGGNN which matches annotation for SP1: Sp1 transcription factor
Full description or abstract XX
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FA Sp3
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OS rat, Rattus norvegicus
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; rodentia; myomorpha; muridae; murinae
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CL C0001; CH.
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CP (adult:) lung epithelial cell line [2]
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FF involved in mediating ethanol-induced stress [1]
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RN [1]; RE0017075.
RX MEDLINE; 20072808.
RA Wilke N., Sganga M. W., Gayer G. G., Hsieh K. P., Miles M. F.
RT Characterization of promoter elements mediating ethanol regulation of hsc70
RT gene transcription
RL J. Pharmacol. Exp. Ther. 292:173-180 (2000).
RN [2]; RE0006863.
RX MEDLINE; 97476222.
RA Ramirez M. I., Rishi A. K., Cao Y. X., Williams M. C.
RT TGT3, Thyroid Transcription Factor I, and Sp1 elements regulate
RT transcriptional activity of the 1.3-kilobase pair promoter of T1alpha, a
RT lung alveolar type I cell gene
RL J. Biol. Chem. 272:26285-26294 (1997).
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Collection C3: motif gene sets
      TFT: transcription factor targets
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Organism Homo sapiens
Contributed by Xiaohui Xie (Broad Institute)
Source platform HUMAN_GENE_SYMBOL
Dataset references  
Download gene set format: grp | text | gmt | gmx | xml
Compute overlaps C1: positional gene sets
C2: curated gene sets
      CGP: chemical and genetic perturbations
      CP: canonical pathways
            CP:BIOCARTA: BioCarta gene sets
            CP:KEGG: KEGG gene sets
            CP:REACTOME: Reactome gene sets
C3: motif gene sets
      MIR: microRNA targets
      TFT: transcription factor targets
C4: computational gene sets
      CGN: cancer gene neighborhoods
      CM: cancer modules
C5: GO gene sets
      BP: GO biological process
      CC: GO cellular component
      MF: GO molecular function
Compendia expression profiles Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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