Gene set: V$SP1_Q4_01

Standard name V$SP1_Q4_01
Brief description Genes with promoter regions [-2kb,2kb] around transcription start site containing the motif NNGGGGCGGGGNN which matches annotation for SP1: Sp1 transcription factor
Full description or abstract XX
XX
XX
FA Sp3
XX
OS rat, Rattus norvegicus
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; rodentia; myomorpha; muridae; murinae
XX
CL C0001; CH.
XX
CP (adult:) lung epithelial cell line [2]
XX
FF involved in mediating ethanol-induced stress [1]
XX
XX
XX
XX
RN [1]; RE0017075.
RX MEDLINE; 20072808.
RA Wilke N., Sganga M. W., Gayer G. G., Hsieh K. P., Miles M. F.
RT Characterization of promoter elements mediating ethanol regulation of hsc70
RT gene transcription
RL J. Pharmacol. Exp. Ther. 292:173-180 (2000).
RN [2]; RE0006863.
RX MEDLINE; 97476222.
RA Ramirez M. I., Rishi A. K., Cao Y. X., Williams M. C.
RT TGT3, Thyroid Transcription Factor I, and Sp1 elements regulate
RT transcriptional activity of the 1.3-kilobase pair promoter of T1alpha, a
RT lung alveolar type I cell gene
RL J. Biol. Chem. 272:26285-26294 (1997).
XX
Collection C3: motif gene sets
TFT: transcription factor targets
Source publication
Related gene sets
(click to toggle related gene sets)
External links
Organism Human
Contributed by Xiaohui Xie (Broad Institute)
Source Platform GENE_SYMBOL
Download gene set format: grp | text | gmt | gmx | xml
Annotate by computing overlaps C1: positional gene sets
C2: curated gene sets
      CGP: chemical and genetic perturbations
      CP: canonical pathways
C3: motif gene sets
      MIR: microRNA targets
      TFT: transcription factor targets
C4: computational gene sets
      CM: cancer modules
      CGN: cancer gene neighborhoods
C5: GO gene sets
      CC: GO cellular component
      BP: GO biological process
      MF: GO molecular function
Compendia expression profiles Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Annotate and analyze these 262 genes
Gene families Categorize these 262 genes by gene family
Show 262 genes (show)