TiTvVariantEvaluator
From GSA
TiTvVariantEvaluator is an evaluation module for VariantEval. It computes the following metrics:
| Metric | Definition |
|---|---|
| nTi | number of transition loci |
| nTv | number of transversion loci |
| tiTvRatio | the transition to transversion ratio |
| nTiInComp | number of comp transition sites |
| nTvInComp | number of comp transversion sites |
| TiTvRatioStandard | the transition to transversion ratio for comp sites |
