MuTect
From GSA
Kristian Cibulskis from the Cancer group at the Broad has developed a somatic mutation caller that is built upon the Unified Genotyper with excellent results. Unfortunately, we cannot provide access to it at this time as it is not yet publicly available. However, if anyone wishes to use it now in a collaborative mode, they can contact Kristian through the following address: mutect-help [at] broadinstitute (dot) org.