Filtering vcf on per sample AD and PL
Posted in Ask the GATK team | Last updated on


Comments (2)

Hello,

I would like to filter my multi-sample vcf using per sample metrics such as AD and PL. However, these are provided as comma-separated lists of numbers. Does anyone know how I can filter, for example, on PL of 0/1 genotype in sample A?

Best wishes,

Kath


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