what "mode" should I use for VariantRecalibrator?
Posted in Ask the GATK team | Last updated on

Comments (3)

For exome-sequencing, I was wondering how I should decide the "-mode" parameter? should I use "SNP" or "Indel" or both? I want to get both information in the final results, should I use "BOTH" -mode?

Return to top Comment on this article in the forum