I want to know if GATK can do what I want! NGS reads, polyploids, phylogeny
Posted in Ask the GATK team | Last updated on 2013-01-10 10:03:54

Comments (5)

Hello, I have 454 reads of loci on polyploid individuals. I am able to produce assemblies containing the different copies of one locus per individual. But I want to extract the reads corresponding to each copies, to then be able to produce phylogenies. Does the GATK can do something like this?


Return to top Comment on this article in the forum