I was here maybe a month or two ago and the documentation seemed fine. This was definitely after the website was redesigned. Now, it seems a bunch of documentation pages are either incomplete or empty. Here are some examples: http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_filters_BadMateFilter.html http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_annotator_BaseCounts.html http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_annotator_DepthOfCoverage.html http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_annotator_SampleList.html http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_annotator_SnpEff.html
Is this a known issue? I saw a post about a similar problem from September 2012, but this seems to be something new.